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Conserved domains on  [gi|1341381309|ref|WP_103858686|]
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MULTISPECIES: cytosine deaminase [Aeromonas]

Protein Classification

cytosine deaminase( domain architecture ID 10793173)

cytosine deaminase catalyzes the hydrolytic deamination of cytosine to uracil

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK09230 PRK09230
cytosine deaminase; Provisional
1-421 0e+00

cytosine deaminase; Provisional


:

Pssm-ID: 181713  Cd Length: 426  Bit Score: 934.12  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   1 MLIRNVRLAGREGMWQILCQGGVIRAIEPMSTQLLSVRE-LDGEQGLVIPPFIEPHIHLDTTQTAGEPSWNFSGTLFEGI 79
Cdd:PRK09230    6 MTIKNARLPGKEGLWQITIEDGKISAIEPQSEASLEAGEvLDAEGGLAIPPFIEPHIHLDTTQTAGEPNWNQSGTLFEGI 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  80 ERWAERKALLTHEDVKQRAIQTLKWQIANGIQFVRTHVDVSDPNLVALKAMLEVREEMKEWVELQIVAFPQEGILSYPNG 159
Cdd:PRK09230   86 ERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQIVAFPQEGILSYPNG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 160 KALLEEALKLGADVIGAIPHFEFTREYGVESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLATLAYERGIGHRVTAS 239
Cdd:PRK09230  166 EALLEEALRLGADVVGAIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHREGMGARVTAS 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 240 HTTAMHSYNGAYASRLFRLLRMADINFVANPLVNIHLQGRFDSYPKRRGITRVKEMLEANINVCFGHDDVFDPWYPMGTA 319
Cdd:PRK09230  246 HTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLEAGINVCFGHDDVFDPWYPLGTA 325
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 320 NMLQVLHMGLHVCQIMGYEQINDSLKLIGSHSARTLNVQDrYGIEVGKPANLLILPAENGFDAVRRQVPVRYSIRHGRVI 399
Cdd:PRK09230  326 NMLQVLHMGLHVCQLMGYGQINDGLNLITTHSARTLNLQD-YGIEVGNPANLIILPAENGFDAVRRQVPVRYSIRHGKVI 404
                         410       420
                  ....*....|....*....|..
gi 1341381309 400 ADTRPAETTLHLVNAESVDFRR 421
Cdd:PRK09230  405 AETQPAQTTIYLEQPEAVDFKR 426
 
Name Accession Description Interval E-value
PRK09230 PRK09230
cytosine deaminase; Provisional
1-421 0e+00

cytosine deaminase; Provisional


Pssm-ID: 181713  Cd Length: 426  Bit Score: 934.12  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   1 MLIRNVRLAGREGMWQILCQGGVIRAIEPMSTQLLSVRE-LDGEQGLVIPPFIEPHIHLDTTQTAGEPSWNFSGTLFEGI 79
Cdd:PRK09230    6 MTIKNARLPGKEGLWQITIEDGKISAIEPQSEASLEAGEvLDAEGGLAIPPFIEPHIHLDTTQTAGEPNWNQSGTLFEGI 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  80 ERWAERKALLTHEDVKQRAIQTLKWQIANGIQFVRTHVDVSDPNLVALKAMLEVREEMKEWVELQIVAFPQEGILSYPNG 159
Cdd:PRK09230   86 ERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQIVAFPQEGILSYPNG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 160 KALLEEALKLGADVIGAIPHFEFTREYGVESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLATLAYERGIGHRVTAS 239
Cdd:PRK09230  166 EALLEEALRLGADVVGAIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHREGMGARVTAS 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 240 HTTAMHSYNGAYASRLFRLLRMADINFVANPLVNIHLQGRFDSYPKRRGITRVKEMLEANINVCFGHDDVFDPWYPMGTA 319
Cdd:PRK09230  246 HTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLEAGINVCFGHDDVFDPWYPLGTA 325
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 320 NMLQVLHMGLHVCQIMGYEQINDSLKLIGSHSARTLNVQDrYGIEVGKPANLLILPAENGFDAVRRQVPVRYSIRHGRVI 399
Cdd:PRK09230  326 NMLQVLHMGLHVCQLMGYGQINDGLNLITTHSARTLNLQD-YGIEVGNPANLIILPAENGFDAVRRQVPVRYSIRHGKVI 404
                         410       420
                  ....*....|....*....|..
gi 1341381309 400 ADTRPAETTLHLVNAESVDFRR 421
Cdd:PRK09230  405 AETQPAQTTIYLEQPEAVDFKR 426
Bact_CD cd01293
Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) ...
2-399 0e+00

Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.


Pssm-ID: 238618 [Multi-domain]  Cd Length: 398  Bit Score: 517.57  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   2 LIRNVRL-AGREGMWQILCQGGVIRAIEPMSTQLLSVRELDGEQGLVIPPFIEPHIHLDTTQTAGEPSWNFSGTLFEGIE 80
Cdd:cd01293     1 LLRNARLaDGGTALVDIAIEDGRIAAIGPALAVPPDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNNSGGTLLEAII 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  81 RWAERKALLTHEDVKQRAIQTLKWQIANGIQFVRTHVDVSDP-NLVALKAMLEVREEMKEWVELQIVAFPQEGILSYPNG 159
Cdd:cd01293    81 AWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAaGLKALEALLELREEWADLIDLQIVAFPQHGLLSTPGG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 160 KALLEEALKLGADVIGAIPHFEfTREYGVESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLATLAYERGIGHRVTAS 239
Cdd:cd01293   161 EELMREALKMGADVVGGIPPAE-IDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSRTLEELAEEAERRGMQGRVTCS 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 240 HTTAMHSYNGAYASRLFRLLRMADINFVANPLVNIHLQGRFDSYPKRRGITRVKEMLEANINVCFGHDDVFDPWYPMGTA 319
Cdd:cd01293   240 HATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGREDTTPKRRGVTPVKELRAAGVNVALGSDNVRDPWYPFGSG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 320 NMLQVLHMGLHVCQIMGYEQINDSLKLIGSHSARTLNVQDrYGIEVGKPANLLILPAENGFDAVRRQVPVRYSIRHGRVI 399
Cdd:cd01293   320 DMLEVANLAAHIAQLGTPEDLALALDLITGNAARALGLED-YGIKVGCPADLVLLDAEDVAEAVARQPPRRVVIRKGRVV 398
Amidohydro_3 pfam07969
Amidohydrolase family;
38-400 1.41e-52

Amidohydrolase family;


Pssm-ID: 400360 [Multi-domain]  Cd Length: 464  Bit Score: 182.35  E-value: 1.41e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  38 RELDGEQGLVIPPFIEPHIHLD------TTQTAGEPSWN-----FSGTLFEGIERWAE-RKALLTHEDVKQRAIQTLKWQ 105
Cdd:pfam07969   1 EVIDAKGRLVLPGFVDPHTHLDggglnlRELRLPDVLPNavvkgQAGRTPKGRWLVGEgWDEAQFAETRFPYALADLDEV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 106 IANGIQFVR---THVDVSDPNLVA------------------------LKAMLE----------VREEMKEWVELQIVAF 148
Cdd:pfam07969  81 APDGPVLLRalhTHAAVANSAALDlagitkatedppggeiardangegLTGLLRegayalppllAREAEAAAVAAALAAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 149 PQEGILSYP--------------------------------------NGKALLEEALKLGADVIGAIPHFEFTREY---- 186
Cdd:pfam07969 161 PGFGITSVDggggnvhslddyeplreltaaeklkelldaperlglphSIYELRIGAMKLFADGVLGSRTAALTEPYfdap 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 187 -------GVESLHYVFDLAEKYQVLVDVHCDEIDDEQSrFIETLATLAYERGIGHRVTASHTTAMHSYNGAYASRLFRLL 259
Cdd:pfam07969 241 gtgwpdfEDEALAELVAAARERGLDVAIHAIGDATIDT-ALDAFEAVAEKLGNQGRVRIEHAQGVVPYTYSQIERVAALG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 260 RMADINFVANPLVNIHLQGRFDsYPKRRGITRVKEMLEANINVCFGHD---DVFDPWYPMGTANMLQVLhMGLHVCQIMG 336
Cdd:pfam07969 320 GAAGVQPVFDPLWGDWLQDRLG-AERARGLTPVKELLNAGVKVALGSDapvGPFDPWPRIGAAVMRQTA-GGGEVLGPDE 397
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1341381309 337 YEQINDSLKLIGSHSARTLNVQDRYG-IEVGKPANLLILPAeNGFD---AVRRQVPVRYSIRHGRVIA 400
Cdd:pfam07969 398 ELSLEEALALYTSGPAKALGLEDRKGtLGVGKDADLVVLDD-DPLTvdpPAIADIRVRLTVVDGRVVY 464
SsnA COG0402
Cytosine/adenosine deaminase or related metal-dependent hydrolase [Nucleotide transport and ...
17-377 3.54e-15

Cytosine/adenosine deaminase or related metal-dependent hydrolase [Nucleotide transport and metabolism, General function prediction only]; Cytosine/adenosine deaminase or related metal-dependent hydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 440171 [Multi-domain]  Cd Length: 416  Bit Score: 76.79  E-value: 3.54e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  17 ILCQGGVIRAIEPMST---QLLSVRELDGEQGLVIPPFIEPHIHLDTTQTAGE-PSWNFSGTLFEGIERwAERKalLTHE 92
Cdd:COG0402    24 VLVEDGRIAAVGPGAElpaRYPAAEVIDAGGKLVLPGLVNTHTHLPQTLLRGLaDDLPLLDWLEEYIWP-LEAR--LDPE 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  93 DVKQRAIQTLKWQIANGIqfvrTHV-DVSDPNLVALKAMLEVREEMKewveLQIVAFPqeGILSYPNGKALLEEALKLGA 171
Cdd:COG0402   101 DVYAGALLALAEMLRSGT----TTVaDFYYVHPESADALAEAAAEAG----IRAVLGR--GLMDRGFPDGLREDADEGLA 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 172 DVIGAI----------------PHFEFTreygV--ESLHYVFDLAEKYQVLVDVHC----DEIDDEQSRFIETLATLAYE 229
Cdd:COG0402   171 DSERLIerwhgaadgrirvalaPHAPYT----VspELLRAAAALARELGLPLHTHLaetrDEVEWVLELYGKRPVEYLDE 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 230 RGI-GHRVTASHTTAMHSyngayasRLFRLLRMADINFVANPLVNIHLqgrfdsypkRRGITRVKEMLEANINVCFGHD- 307
Cdd:COG0402   247 LGLlGPRTLLAHCVHLTD-------EEIALLAETGASVAHCPTSNLKL---------GSGIAPVPRLLAAGVRVGLGTDg 310
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1341381309 308 ----DVFDPWYPMGTANMLQVLHMGLHvcQIMGYEQIndsLKLIGSHSARTLNVQDRYG-IEVGKPANLLILPAE 377
Cdd:COG0402   311 aasnNSLDMFEEMRLAALLQRLRGGDP--TALSAREA---LEMATLGGARALGLDDEIGsLEPGKRADLVVLDLD 380
 
Name Accession Description Interval E-value
PRK09230 PRK09230
cytosine deaminase; Provisional
1-421 0e+00

cytosine deaminase; Provisional


Pssm-ID: 181713  Cd Length: 426  Bit Score: 934.12  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   1 MLIRNVRLAGREGMWQILCQGGVIRAIEPMSTQLLSVRE-LDGEQGLVIPPFIEPHIHLDTTQTAGEPSWNFSGTLFEGI 79
Cdd:PRK09230    6 MTIKNARLPGKEGLWQITIEDGKISAIEPQSEASLEAGEvLDAEGGLAIPPFIEPHIHLDTTQTAGEPNWNQSGTLFEGI 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  80 ERWAERKALLTHEDVKQRAIQTLKWQIANGIQFVRTHVDVSDPNLVALKAMLEVREEMKEWVELQIVAFPQEGILSYPNG 159
Cdd:PRK09230   86 ERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQIVAFPQEGILSYPNG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 160 KALLEEALKLGADVIGAIPHFEFTREYGVESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLATLAYERGIGHRVTAS 239
Cdd:PRK09230  166 EALLEEALRLGADVVGAIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHREGMGARVTAS 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 240 HTTAMHSYNGAYASRLFRLLRMADINFVANPLVNIHLQGRFDSYPKRRGITRVKEMLEANINVCFGHDDVFDPWYPMGTA 319
Cdd:PRK09230  246 HTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLEAGINVCFGHDDVFDPWYPLGTA 325
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 320 NMLQVLHMGLHVCQIMGYEQINDSLKLIGSHSARTLNVQDrYGIEVGKPANLLILPAENGFDAVRRQVPVRYSIRHGRVI 399
Cdd:PRK09230  326 NMLQVLHMGLHVCQLMGYGQINDGLNLITTHSARTLNLQD-YGIEVGNPANLIILPAENGFDAVRRQVPVRYSIRHGKVI 404
                         410       420
                  ....*....|....*....|..
gi 1341381309 400 ADTRPAETTLHLVNAESVDFRR 421
Cdd:PRK09230  405 AETQPAQTTIYLEQPEAVDFKR 426
Bact_CD cd01293
Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) ...
2-399 0e+00

Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.


Pssm-ID: 238618 [Multi-domain]  Cd Length: 398  Bit Score: 517.57  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   2 LIRNVRL-AGREGMWQILCQGGVIRAIEPMSTQLLSVRELDGEQGLVIPPFIEPHIHLDTTQTAGEPSWNFSGTLFEGIE 80
Cdd:cd01293     1 LLRNARLaDGGTALVDIAIEDGRIAAIGPALAVPPDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNNSGGTLLEAII 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  81 RWAERKALLTHEDVKQRAIQTLKWQIANGIQFVRTHVDVSDP-NLVALKAMLEVREEMKEWVELQIVAFPQEGILSYPNG 159
Cdd:cd01293    81 AWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAaGLKALEALLELREEWADLIDLQIVAFPQHGLLSTPGG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 160 KALLEEALKLGADVIGAIPHFEfTREYGVESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLATLAYERGIGHRVTAS 239
Cdd:cd01293   161 EELMREALKMGADVVGGIPPAE-IDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSRTLEELAEEAERRGMQGRVTCS 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 240 HTTAMHSYNGAYASRLFRLLRMADINFVANPLVNIHLQGRFDSYPKRRGITRVKEMLEANINVCFGHDDVFDPWYPMGTA 319
Cdd:cd01293   240 HATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGREDTTPKRRGVTPVKELRAAGVNVALGSDNVRDPWYPFGSG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 320 NMLQVLHMGLHVCQIMGYEQINDSLKLIGSHSARTLNVQDrYGIEVGKPANLLILPAENGFDAVRRQVPVRYSIRHGRVI 399
Cdd:cd01293   320 DMLEVANLAAHIAQLGTPEDLALALDLITGNAARALGLED-YGIKVGCPADLVLLDAEDVAEAVARQPPRRVVIRKGRVV 398
PRK07572 PRK07572
cytosine deaminase; Validated
1-421 2.36e-168

cytosine deaminase; Validated


Pssm-ID: 181039  Cd Length: 426  Bit Score: 478.74  E-value: 2.36e-168
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   1 MLIRNVRL-AGREGMwQILCQGGVIRAIEPmSTQLLSVRELDGEQGLVIPPFIEPHIHLDTTQTAGEPSWNFSGTLFEGI 79
Cdd:PRK07572    4 LIVRNANLpDGRTGI-DIGIAGGRIAAVEP-GLQAEAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLPRVNASGTLLEGI 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  80 ERWAERKALLTHEDVKQRAIQTLKWQIANGIQFVRTHVDVSDPNLVALKAMLEVREEMKEWVELQIVAFPQEGILSYPNG 159
Cdd:PRK07572   82 ALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLVAFPQDGVLRSPGA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 160 KALLEEALKLGADVIGAIPHFEFTREYGVESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLATLAYERGIGHRVTAS 239
Cdd:PRK07572  162 VDNLERALDMGVDVVGGIPHFERTMADGAESVRLLCEIAAERGLRVDMHCDESDDPLSRHIETLAAETQRLGLQGRVAGS 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 240 HTTAMHSYNGAYASRLFRLLRMADINFVANPLVNIHLQGRFDSYPKRRGITRVKEMLEANINVCFGHDDVFDPWYPMGTA 319
Cdd:PRK07572  242 HLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQGRHDTYPKRRGMTRVPELMAAGINVAFGHDCVMDPWYSLGSG 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 320 NMLQVLHMGLHVCQIMGYEQINDSLKLIGSHSARTLNVQDrYGIEVGKPANLLILPAENGFDAVRRQVPVRYSIRHGRVI 399
Cdd:PRK07572  322 DMLEVAHMGLHVAQMTGQDAMRACFDAVTVNPARIMGLEG-YGLEPGCNADLVLLQARDPIEAIRLRAARLAVIRRGKVI 400
                         410       420
                  ....*....|....*....|...
gi 1341381309 400 ADTRPAETTLHLVN-AESVDFRR 421
Cdd:PRK07572  401 ARTPPRVARLSLPGrPATVDFRL 423
PRK05985 PRK05985
cytosine deaminase; Provisional
1-400 2.24e-60

cytosine deaminase; Provisional


Pssm-ID: 180337 [Multi-domain]  Cd Length: 391  Bit Score: 200.93  E-value: 2.24e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   1 MLIRNVRLAGREGMwQILCQGGVIRAIEPMSTQLLSVRELDGEQGLVIPPFIEPHIHLDTTqTAGEPsW---NFSGTLFE 77
Cdd:PRK05985    4 LLFRNVRPAGGAAV-DILIRDGRIAAIGPALAAPPGAEVEDGGGALALPGLVDGHIHLDKT-FWGDP-WypnEPGPSLRE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  78 GIERWAERKALLTHeDVKQRAIQTLKWQIANGIQFVRTHVDVsDPN--LVALKAMLEVREEMKEWVELQIVAFPQEGILS 155
Cdd:PRK05985   81 RIANERRRRAASGH-PAAERALALARAAAAAGTTAMRSHVDV-DPDagLRHLEAVLAARETLRGLIDIQIVAFPQSGVLS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 156 YPNGKALLEEALKLGADVIGAIPHFEFTREyGVESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLATLAYERGIGHR 235
Cdd:PRK05985  159 RPGTAELLDAALRAGADVVGGLDPAGIDGD-PEGQLDIVFGLAERHGVGIDIHLHEPGELGAFQLERIAARTRALGMQGR 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 236 VTASHTTAMHSYNGAYASRLFRLLRMADINFVANPlvnihlqgrfdsyPKRRGITRVKEMLEANINVCFGHDDVFDPWYP 315
Cdd:PRK05985  238 VAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNA-------------PGSVPVPPVAALRAAGVTVFGGNDGIRDTWWP 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 316 MGTANMLQVLHMglhvcqiMGYEQ---INDSLKL---IGSHS-ARTLNVQDrYGIEVGKPANLLILPAENGFDAVrRQVP 388
Cdd:PRK05985  305 YGNGDMLERAML-------IGYRSgfrTDDELAAaldCVTHGgARALGLED-YGLAVGARADFVLVDAETVAEAV-VAVP 375
                         410
                  ....*....|...
gi 1341381309 389 VRYSI-RHGRVIA 400
Cdd:PRK05985  376 VRRLVvRGGRIVA 388
Amidohydro_3 pfam07969
Amidohydrolase family;
38-400 1.41e-52

Amidohydrolase family;


Pssm-ID: 400360 [Multi-domain]  Cd Length: 464  Bit Score: 182.35  E-value: 1.41e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  38 RELDGEQGLVIPPFIEPHIHLD------TTQTAGEPSWN-----FSGTLFEGIERWAE-RKALLTHEDVKQRAIQTLKWQ 105
Cdd:pfam07969   1 EVIDAKGRLVLPGFVDPHTHLDggglnlRELRLPDVLPNavvkgQAGRTPKGRWLVGEgWDEAQFAETRFPYALADLDEV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 106 IANGIQFVR---THVDVSDPNLVA------------------------LKAMLE----------VREEMKEWVELQIVAF 148
Cdd:pfam07969  81 APDGPVLLRalhTHAAVANSAALDlagitkatedppggeiardangegLTGLLRegayalppllAREAEAAAVAAALAAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 149 PQEGILSYP--------------------------------------NGKALLEEALKLGADVIGAIPHFEFTREY---- 186
Cdd:pfam07969 161 PGFGITSVDggggnvhslddyeplreltaaeklkelldaperlglphSIYELRIGAMKLFADGVLGSRTAALTEPYfdap 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 187 -------GVESLHYVFDLAEKYQVLVDVHCDEIDDEQSrFIETLATLAYERGIGHRVTASHTTAMHSYNGAYASRLFRLL 259
Cdd:pfam07969 241 gtgwpdfEDEALAELVAAARERGLDVAIHAIGDATIDT-ALDAFEAVAEKLGNQGRVRIEHAQGVVPYTYSQIERVAALG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 260 RMADINFVANPLVNIHLQGRFDsYPKRRGITRVKEMLEANINVCFGHD---DVFDPWYPMGTANMLQVLhMGLHVCQIMG 336
Cdd:pfam07969 320 GAAGVQPVFDPLWGDWLQDRLG-AERARGLTPVKELLNAGVKVALGSDapvGPFDPWPRIGAAVMRQTA-GGGEVLGPDE 397
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1341381309 337 YEQINDSLKLIGSHSARTLNVQDRYG-IEVGKPANLLILPAeNGFD---AVRRQVPVRYSIRHGRVIA 400
Cdd:pfam07969 398 ELSLEEALALYTSGPAKALGLEDRKGtLGVGKDADLVVLDD-DPLTvdpPAIADIRVRLTVVDGRVVY 464
PRK06846 PRK06846
putative deaminase; Validated
1-400 2.55e-45

putative deaminase; Validated


Pssm-ID: 235873 [Multi-domain]  Cd Length: 410  Bit Score: 161.72  E-value: 2.55e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   1 MLIRNVRL------------AGREGMWQILCQGGVIRAIEPMSTQLLS-VRELDGEQGLVIPPFIEPHIHLDTTQTAGEp 67
Cdd:PRK06846    6 YWLTNVRLetgfdyengvivQTETALCTLEIQDGKIVAIRPNKQVPDAtLPTYDANGLLMLPAFREMHIHLDKTYYGGP- 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  68 sWNFS---GTLFEGI--ERWAERKALLThedVKQRAIQTLKWQIANGIQFVRTHVDVsDP--NLVALKAMLEVREEMKEW 140
Cdd:PRK06846   85 -WKACrpaKTIQDRIelEQKELPELLPT---TQERAEKLIELLQSKGATHIRSHCNI-DPviGLKNLENLQAALERYKDG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 141 VELQIVAFPQEGILsYPNGKALLEEALKLGADVIGAI-PHfefTREYGVE-SLHYVFDLAEKYQVLVDVHCDEIDDEQSR 218
Cdd:PRK06846  160 FTYEIVAFPQHGLL-RSNSEPLMREAMKMGAHLVGGVdPA---SVDGAIEkSLDTMFQIAVDFNKGVDIHLHDTGPLGVA 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 219 FIETLATLAYERGIGHRVTASHTTAMHSYNGAYASRLFRLLRMADINFVAnplvnihlqgrfdSYPKRRGITRVKEMLEA 298
Cdd:PRK06846  236 TIKYLVETTEEAQWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITS-------------TVPIGRLHMPIPLLHDK 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 299 NINVCFGHDDVFDPWYPMGTANMLQVLHMglhVCQIMGY---EQINDSLKLIgSHSARTLNVQ-DRYGIEVGKPANLLIL 374
Cdd:PRK06846  303 GVKVSLGTDSVIDHWSPFGTGDMLEKANL---LAELYRWsdeRSLSRSLALA-TGGVLPLNDEgERVWPKVGDEASFVLV 378
                         410       420
                  ....*....|....*....|....*.
gi 1341381309 375 PAENGFDAVRRQVPVRYSIRHGRVIA 400
Cdd:PRK06846  379 DASCSAEAVARQSPRTAVFHKGQLVA 404
PRK07583 PRK07583
cytosine deaminase;
17-404 2.16e-39

cytosine deaminase;


Pssm-ID: 236062  Cd Length: 438  Bit Score: 146.28  E-value: 2.16e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  17 ILCQGGVIRAIEPMSTQLLSVRELDGEQGLVIPPFIEPHIHLD---TTQTAGEPSWNFSGTLFEGIerwAERKALLTHED 93
Cdd:PRK07583   43 IEIADGKIAAILPAGGAPDELPAVDLKGRMVWPCFVDMHTHLDkghIWPRSPNPDGTFPGALDAVT---ADREAHWSAED 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  94 VKQRAIQTLKWQIANGIQFVRTHVDVSDPNL-VALKAMLEVREEMKEWVELQIVA-FPQEGILSyPNGKALLEEALKLGA 171
Cdd:PRK07583  120 LYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAaISWEVFAELREAWAGRIALQAVSlVPLDAYLT-DAGERLADLVAEAGG 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 172 dVIGAI----PHFEftreygvESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLATLAYERGIGHRVTASHTTAMHSY 247
Cdd:PRK07583  199 -LLGGVtymnPDLD-------AQLDRLFRLARERGLDLDLHVDETGDPASRTLKAVAEAALRNGFEGKVTCGHCCSLAVQ 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 248 NGAYASRLFRLLRMADINFVANPLVNIHLQGRFDSY-PKRRGITRVKEMLEANINVCFGHDDVFDPWYPMGTANMLQVLH 326
Cdd:PRK07583  271 PEEQAQATIALVAEAGIAIVSLPMCNLYLQDRQPGRtPRWRGVTLVHELKAAGIPVAVASDNCRDPFYAYGDHDMLEVFR 350
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1341381309 327 MGLHVCQI-MGYEqinDSLKLIGSHSARTLNVQDRYGIEVGKPANLLILPAENGFDAVRRQVPVRYSIRHGRVIADTRP 404
Cdd:PRK07583  351 EAVRILHLdHPYD---DWPAAVTTTPADIMGLPDLGRIAVGAPADLVLFKARSFSELLSRPQSDRIVLRAGKPIDTTLP 426
metallo-dependent_hydrolases cd01292
Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a ...
51-353 2.76e-28

Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.


Pssm-ID: 238617 [Multi-domain]  Cd Length: 275  Bit Score: 112.43  E-value: 2.76e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  51 FIEPHIHLDTTQTAGEPSWNfsgtlfegierWAERKALLTHEDVKQRAIQTLKWQIANGIQFVRTHVDVSDPNLvALKAM 130
Cdd:cd01292     1 FIDTHVHLDGSALRGTRLNL-----------ELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTT-TKAAI 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 131 LEVREEMKEWVELQIVAFPqeGILSYPN---------GKALLEEALKLGADVIGAIPHfEFTREYGVESLHYVFDLAEKY 201
Cdd:cd01292    69 EAVAEAARASAGIRVVLGL--GIPGVPAavdedaealLLELLRRGLELGAVGLKLAGP-YTATGLSDESLRRVLEEARKL 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 202 QVLVDVHCDEIDDEqSRFIETLATLAyerGIGHRVTASHTTAMHSyngayasRLFRLLRMADINFVANPLVNIHLQgrfd 281
Cdd:cd01292   146 GLPVVIHAGELPDP-TRALEDLVALL---RLGGRVVIGHVSHLDP-------ELLELLKEAGVSLEVCPLSNYLLG---- 210
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1341381309 282 syPKRRGITRVKEMLEANINVCFGHDDVFDPwypmGTANMLQVLHMGLHVCQIMGyeQINDSLKLIGSHSAR 353
Cdd:cd01292   211 --RDGEGAEALRRLLELGIRVTLGTDGPPHP----LGTDLLALLRLLLKVLRLGL--SLEEALRLATINPAR 274
PRK06886 PRK06886
hypothetical protein; Validated
84-342 7.46e-27

hypothetical protein; Validated


Pssm-ID: 180740  Cd Length: 329  Bit Score: 109.54  E-value: 7.46e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  84 ERKALLTHEDVKQRAIQTLKWQIANGIQFVRTHVDVsDP--NLVALKAMLEVREEMKEWVELQIVAFPQEGILSyPNGKA 161
Cdd:PRK06886   57 EVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDI-DPicEDRAIIAAHKAREVYKHDIILKFANQTLKGVIE-PTAKK 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 162 LLEEALKLgADVIGAIPH-FEFTREYGVESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLATLAYERGIGHRVTASH 240
Cdd:PRK06886  135 WFDIGSEM-VDMIGGLPYrDELDYGRGLEAMDILLDTAKSLGKMVHVHVDQFNTPKEKETEQLCDKTIEHGMQGRVVAIH 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 241 TTAMHSYNGAYASRLFRLLRMADINFVANPLVNIHLQGRFDSYPKRRGITRVKEMLEANINVCFGHDDVFDPWYPMGTAN 320
Cdd:PRK06886  214 GISIGAHSKEYRYRLYQKMREADMMVIACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVALGTDNICDYMVPLCEGD 293
                         250       260
                  ....*....|....*....|..
gi 1341381309 321 MLQVLHMGLHVCQIMGYEQIND 342
Cdd:PRK06886  294 MWQELSLLAAGCRFYDLDEMVN 315
SsnA COG0402
Cytosine/adenosine deaminase or related metal-dependent hydrolase [Nucleotide transport and ...
17-377 3.54e-15

Cytosine/adenosine deaminase or related metal-dependent hydrolase [Nucleotide transport and metabolism, General function prediction only]; Cytosine/adenosine deaminase or related metal-dependent hydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 440171 [Multi-domain]  Cd Length: 416  Bit Score: 76.79  E-value: 3.54e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  17 ILCQGGVIRAIEPMST---QLLSVRELDGEQGLVIPPFIEPHIHLDTTQTAGE-PSWNFSGTLFEGIERwAERKalLTHE 92
Cdd:COG0402    24 VLVEDGRIAAVGPGAElpaRYPAAEVIDAGGKLVLPGLVNTHTHLPQTLLRGLaDDLPLLDWLEEYIWP-LEAR--LDPE 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  93 DVKQRAIQTLKWQIANGIqfvrTHV-DVSDPNLVALKAMLEVREEMKewveLQIVAFPqeGILSYPNGKALLEEALKLGA 171
Cdd:COG0402   101 DVYAGALLALAEMLRSGT----TTVaDFYYVHPESADALAEAAAEAG----IRAVLGR--GLMDRGFPDGLREDADEGLA 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 172 DVIGAI----------------PHFEFTreygV--ESLHYVFDLAEKYQVLVDVHC----DEIDDEQSRFIETLATLAYE 229
Cdd:COG0402   171 DSERLIerwhgaadgrirvalaPHAPYT----VspELLRAAAALARELGLPLHTHLaetrDEVEWVLELYGKRPVEYLDE 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 230 RGI-GHRVTASHTTAMHSyngayasRLFRLLRMADINFVANPLVNIHLqgrfdsypkRRGITRVKEMLEANINVCFGHD- 307
Cdd:COG0402   247 LGLlGPRTLLAHCVHLTD-------EEIALLAETGASVAHCPTSNLKL---------GSGIAPVPRLLAAGVRVGLGTDg 310
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1341381309 308 ----DVFDPWYPMGTANMLQVLHMGLHvcQIMGYEQIndsLKLIGSHSARTLNVQDRYG-IEVGKPANLLILPAE 377
Cdd:COG0402   311 aasnNSLDMFEEMRLAALLQRLRGGDP--TALSAREA---LEMATLGGARALGLDDEIGsLEPGKRADLVVLDLD 380
HutI COG1228
Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport ...
1-402 1.56e-13

Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440841 [Multi-domain]  Cd Length: 386  Bit Score: 71.53  E-value: 1.56e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   1 MLIRNVRLA-GREGM----WQILCQGGVIRAIEPMSTQLL--SVRELDGEQGLVIPPFIEPHIHLDttqtagepswnFSG 73
Cdd:COG1228    10 LLITNATLVdGTGGGvienGTVLVEDGKIAAVGPAADLAVpaGAEVIDATGKTVLPGLIDAHTHLG-----------LGG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  74 tlfEGIERWAERKALLTHEDVKQRAIQTLKWQIANGIQFVRTHVDvsdpNLVALKAMLEvREEMKEWVELQIvaFPQEGI 153
Cdd:COG1228    79 ---GRAVEFEAGGGITPTVDLVNPADKRLRRALAAGVTTVRDLPG----GPLGLRDAII-AGESKLLPGPRV--LAAGPA 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 154 LSYPNG---------KALLEEALKLGADVI-----GAIPHFEftreygVESLHYVFDLAEKYQVLVDVHCDEIDDeqsrf 219
Cdd:COG1228   149 LSLTGGahargpeeaRAALRELLAEGADYIkvfaeGGAPDFS------LEELRAILEAAHALGLPVAAHAHQADD----- 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 220 ietlATLAYERGI-----GHRVTASHTTAMHSYNGAYASRLFrllrmadinFVANPLVNIHLQGRFDSYPKRRGITR--V 292
Cdd:COG1228   218 ----IRLAVEAGVdsiehGTYLDDEVADLLAEAGTVVLVPTL---------SLFLALLEGAAAPVAAKARKVREAALanA 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 293 KEMLEANINVCFGHDDVFdpWYPMGTANMLQVLHMGLHVcqiMGYEQIndsLKLIGSHSARTLNVQDRYG-IEVGKPANL 371
Cdd:COG1228   285 RRLHDAGVPVALGTDAGV--GVPPGRSLHRELALAVEAG---LTPEEA---LRAATINAAKALGLDDDVGsLEPGKLADL 356
                         410       420       430
                  ....*....|....*....|....*....|.
gi 1341381309 372 LILPAeNGFDAVRRQVPVRYSIRHGRVIADT 402
Cdd:COG1228   357 VLLDG-DPLEDIAYLEDVRAVMKDGRVVDRS 386
Amidohydro_1 pfam01979
Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase ...
46-399 8.74e-11

Amidohydrolase family; This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilization as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included.


Pssm-ID: 460401 [Multi-domain]  Cd Length: 334  Bit Score: 62.90  E-value: 8.74e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  46 LVIPPFIEPHIHLdttqtagEPSWNFSGTLFEGIERWAERKALLTHedvkqraiqtlkwqIANGIQFVRTHVDVSDPNLV 125
Cdd:pfam01979   1 IVLPGLIDAHVHL-------EMGLLRGIPVPPEFAYEALRLGITTM--------------LKSGTTTVLDMGATTSTGIE 59
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 126 AL-KAMLEVREEMKEWVELQIVAFPQEGILSYPNGKALLEEALKLGADVIGAI-----PHFEFTreYGVESLHYVFDLAE 199
Cdd:pfam01979  60 ALlEAAEELPLGLRFLGPGCSLDTDGELEGRKALREKLKAGAEFIKGMADGVVfvglaPHGAPT--FSDDELKAALEEAK 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 200 KYQVLVDVHCDEIDDEQSRFIEtlatlAYERGIGHrvtASHTTAMHSYN-----------GAY--ASRLFRLLRMADINF 266
Cdd:pfam01979 138 KYGLPVAIHALETKGEVEDAIA-----AFGGGIEH---GTHLEVAESGGlldiiklilahGVHlsPTEANLLAEHLKGAG 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 267 VANPLVNIHLqgrfdsypKRRGITRVKEMLEANINVCFGHDDVFDpwypMGTANMLQVL-HMGLHVCQIMGYEQINDSLK 345
Cdd:pfam01979 210 VAHCPFSNSK--------LRSGRIALRKALEDGVKVGLGTDGAGS----GNSLNMLEELrLALELQFDPEGGLSPLEALR 277
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1341381309 346 LIGSHSARTLNVQDRYG-IEVGKPANLLI--LPAENGFDAVRRQVPVRYSIRHGRVI 399
Cdd:pfam01979 278 MATINPAKALGLDDKVGsIEVGKDADLVVvdLDPLAAFFGLKPDGNVKKVIVKGKIV 334
Imidazolone-5PH cd01296
Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third ...
17-378 1.22e-08

Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.


Pssm-ID: 238621 [Multi-domain]  Cd Length: 371  Bit Score: 56.50  E-value: 1.22e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  17 ILCQGGVIRAIEPMSTQLLS----VRELDGEQGLVIPPFIEPHIHL----DTTQtagEPSWNFSGTLFE-------GIER 81
Cdd:cd01296     1 IAIRDGRIAAVGPAASLPAPgpaaAEEIDAGGRAVTPGLVDCHTHLvfagDRVD---EFAARLAGASYEeilaaggGILS 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  82 --WAERKAllTHEDVKQRAIQTLKWQIANGIQFVRT----HVDVSDPnlvalKAMLEVREEMKEWVELQIVA-FpqEGIL 154
Cdd:cd01296    78 tvRATRAA--SEDELFASALRRLARMLRHGTTTVEVksgyGLDLETE-----LKMLRVIRRLKEEGPVDLVStF--LGAH 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 155 SYPNGKALLEEALKLGADVIgaIPHFEftreygveslhyvfdlAEKYQVLVDVHCDEI--DDEQSRfieTLATLAYERGI 232
Cdd:cd01296   149 AVPPEYKGREEYIDLVIEEV--LPAVA----------------EENLADFCDVFCEKGafSLEQSR---RILEAAKEAGL 207
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 233 GHRVTASHTTAMH------SYNGAYASRLFRL-----LRMADINFVAN--PLVNIHLQgrfDSYPkrrgitRVKEMLEAN 299
Cdd:cd01296   208 PVKIHADELSNIGgaelaaELGALSADHLEHTsdegiAALAEAGTVAVllPGTAFSLR---ETYP------PARKLIDAG 278
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 300 INVCFGHDdvFDPwYPMGTANMLQVLHMGlhvCQIMGYeQINDSLKLIGSHSARTLNVQDRYG-IEVGKPANLLILPAEN 378
Cdd:cd01296   279 VPVALGTD--FNP-GSSPTSSMPLVMHLA---CRLMRM-TPEEALTAATINAAAALGLGETVGsLEVGKQADLVILDAPS 351
ATZ_TRZ_like cd01298
TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. ...
1-374 6.22e-08

TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.


Pssm-ID: 238623 [Multi-domain]  Cd Length: 411  Bit Score: 54.52  E-value: 6.22e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   1 MLIRNVRL-----AGREGMWQILCQGGVIRAIEPMSTQLL--SVRELDGEQGLVIPPFIEPHIHLDTTQTAGEPS-WNFS 72
Cdd:cd01298     1 ILIRNGTIvttdpRRVLEDGDVLVEDGRIVAVGPALPLPAypADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADdLPLM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  73 GTLFEGIERWAerkALLTHEDVKQRAIQTLKWQIANGIQfvrTHVD--VSDPNLVAlkamlevreemKEWVELQIVAFPQ 150
Cdd:cd01298    81 EWLKDLIWPLE---RLLTEEDVYLGALLALAEMIRSGTT---TFADmyFFYPDAVA-----------EAAEELGIRAVLG 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 151 EGILSYPNGKA-LLEEALKLGADVIGAI-------------PHFEFTreYGVESLHYVFDLAEKYQVLVDVHCDEIDDEQ 216
Cdd:cd01298   144 RGIMDLGTEDVeETEEALAEAERLIREWhgaadgrirvalaPHAPYT--CSDELLREVAELAREYGVPLHIHLAETEDEV 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 217 SRFIET--LATLAY--ERGI-GHRVTASHttamhsynGAYAS-RLFRLLRMADINFVANPLVNIHLQGrfdsypkrrGIT 290
Cdd:cd01298   222 EESLEKygKRPVEYleELGLlGPDVVLAH--------CVWLTdEEIELLAETGTGVAHNPASNMKLAS---------GIA 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 291 RVKEMLEANINVCFGHD--------DVFDpwyPMGTANMLQ--------------VLHMGlhvcQIMGYEQINdsLKLIG 348
Cdd:cd01298   285 PVPEMLEAGVNVGLGTDgaasnnnlDMFE---EMRLAALLQklahgdptalpaeeALEMA----TIGGAKALG--LDEIG 355
                         410       420
                  ....*....|....*....|....*.
gi 1341381309 349 ShsartlnvqdrygIEVGKPANLLIL 374
Cdd:cd01298   356 S-------------LEVGKKADLILI 368
D-HYD cd01314
D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases ...
1-221 2.54e-04

D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.


Pssm-ID: 238639 [Multi-domain]  Cd Length: 447  Bit Score: 42.97  E-value: 2.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309   1 MLIRNVRLAGREGMWQ--ILCQGGVIRAIEPMSTQLLSVRELDGEQGLVIPPFIEPHIHLDT----TQTA-----GEPSW 69
Cdd:cd01314     1 LIIKNGTIVTADGSFKadILIEDGKIVAIGPNLEAPGGVEVIDATGKYVLPGGIDPHTHLELpfmgTVTAddfesGTRAA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  70 NFSGT--------------LFEGIERW---AERKALlthedvkqraiqtlkwqIANGIqfvrtHVDVSDPNlvalkamLE 132
Cdd:cd01314    81 AAGGTttiidfaipnkgqsLLEAVEKWrgkADGKSV-----------------IDYGF-----HMIITDWT-------DS 131
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 133 VREEMKEWVELQIVAFpqEGILSYPNgkalleeaLKLGADvigaiphfeftreygvESLHYVFDLAEKYQVLVDVHC--- 209
Cdd:cd01314   132 VIEELPELVKKGISSF--KVFMAYKG--------LLMVDD----------------EELLDVLKRAKELGALVMVHAeng 185
                         250
                  ....*....|..
gi 1341381309 210 DEIDDEQSRFIE 221
Cdd:cd01314   186 DVIAELQKKLLA 197
PRK06380 PRK06380
metal-dependent hydrolase; Provisional
40-376 3.95e-04

metal-dependent hydrolase; Provisional


Pssm-ID: 180548 [Multi-domain]  Cd Length: 418  Bit Score: 42.56  E-value: 3.95e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309  40 LDGEQGLVIPPFIEPHIHLDTTQTAGEpswnFSGT-LFEGIERWAERKALLTHEDVKQRAIQTLKWQIANGIQfvrTHVD 118
Cdd:PRK06380   45 IDATGKVVMPGLINTHAHVGMTASKGL----FDDVdLEEFLMKTFKYDSKRTREGIYNSAKLGMYEMINSGIT---AFVD 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 119 V-SDPNLVALKA-MLEVREEMKeWVELQIVAFPQEGilsypngkalleEALKLGADVIGAIPHFEF-TREYGV------- 188
Cdd:PRK06380  118 LyYSEDIIAKAAeELGIRAFLS-WAVLDEEITTQKG------------DPLNNAENFIREHRNEELvTPSIGVqgiyvan 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 189 -ESLHYVFDLAEKYQVLVDVHCDEIDDEQSRFIETLAtlayERGIGH---------RVTASHTTAMhSYNGAyasrlfRL 258
Cdd:PRK06380  185 dETYLKAKEIAEKYDTIMHMHLSETRKEVYDHVKRTG----ERPVEHlekigflnsKLIAAHCVWA-TYHEI------KL 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341381309 259 LRMADINFVANPLVNIHLqgrfdsypKRRGITRVKEMLEANINVCFGHDDvfdpwypMGTANMLQVLH-MGLHVCQIMGY 337
Cdd:PRK06380  254 LSKNGVKVSWNSVSNFKL--------GTGGSPPIPEMLDNGINVTIGTDS-------NGSNNSLDMFEaMKFSALSVKNE 318
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1341381309 338 E------QINDSLKLIGSHSARTLNVqDRYGIEVGKPANLLILPA 376
Cdd:PRK06380  319 RwdasiiKAQEILDFATINAAKALEL-NAGSIEVGKLADLVILDA 362
PRK08323 PRK08323
phenylhydantoinase; Validated
1-59 4.31e-03

phenylhydantoinase; Validated


Pssm-ID: 236240 [Multi-domain]  Cd Length: 459  Bit Score: 39.00  E-value: 4.31e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1341381309   1 MLIRNVRLAGREGMWQ--ILCQGGVIRAIEPMStqllSVRELDGEQGLVIPPFIEPHIHLD 59
Cdd:PRK08323    3 TLIKNGTVVTADDTYKadVLIEDGKIAAIGANL----GDEVIDATGKYVMPGGIDPHTHME 59
pyrC PRK09357
dihydroorotase; Validated
1-58 7.34e-03

dihydroorotase; Validated


Pssm-ID: 236479 [Multi-domain]  Cd Length: 423  Bit Score: 38.25  E-value: 7.34e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1341381309   1 MLIRNVRLAGREGMWQ---ILCQGGVIRAIEPmSTQLLSVRELDGEQGLVIPPFIEPHIHL 58
Cdd:PRK09357    3 ILIKNGRVIDPKGLDEvadVLIDDGKIAAIGE-NIEAEGAEVIDATGLVVAPGLVDLHVHL 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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