|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
897-1368 |
1.81e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.20 E-value: 1.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 897 LEALREATEKRLAADRERQKALAVECERLDPHGETFALALRAREADEAQVEMALEALAERQAELAEREAELAPRLTDVAL 976
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 977 ACIDDYQRYLQEGGEFAQQEAAEARLEAETALAELAP----RCEAAVRELEAHGQTWLAAEQFSDAGGVERLQALEARLA 1052
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALaeleEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1053 ELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDGERDRLRALARFEAEGGVDFMVTAAEVQEELEAAQARATR 1132
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVV 553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1133 RADFDFTRIRAYLevRDAAGGSQKLEREIARVRRELGELRETRKARGEERDALEARLAEQRRALACIDQLAVEWLRVLRD 1212
Cdd:COG1196 554 EDDEVAAAAIEYL--KAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAAR 631
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1213 LPEGWPRRLAALVDLAEASrwpGEADEHAARNAALdawhdmTGSEGQGELDIEALEACQQTLVDALGELNLGEQARNRER 1292
Cdd:COG1196 632 LEAALRRAVTLAGRLREVT---LEGEGGSAGGSLT------GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAE 702
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1341974154 1293 QARQVEGGERKLAEALAEAAHSRMFSDTERARLAGLTHASAEALDDLSRLHDQLAG--QLDDHKVRVERLHASREQIE 1368
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEppDLEELERELERLEREIEALG 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
468-1056 |
5.22e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.56 E-value: 5.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 468 LEELTRELAELDERRDDLEHERERLESQQRDFVDNQSFYTQALAEGLFSEAELETPEASAEAAKAEAADARRALNAhlgr 547
Cdd:COG1196 276 LEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE---- 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 548 vgELKQIAAwhdayrrecpgtAPAERLEEKLEREAELAESLDELTRRRDEALGAFETARAERERLNGERERLTGEQGLLA 627
Cdd:COG1196 352 --ELEEAEA------------ELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLE 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 628 rgqapwrafvegwpgeevsgfwtRRKTALAELESNCREAEQRRQEAERTLARLAplAEAARRYAELHGDDEPVHLRSRLR 707
Cdd:COG1196 418 -----------------------RLEEELEELEEALAELEEEEEEEEEALEEAA--EEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 708 ERERELGDERKRLLDEenhLRTLHRARLDFAERSELTPEKWLA-DARRRYPRLLREAETLEADIAARERYLESLSGDPLE 786
Cdd:COG1196 473 ALLEAALAELLEELAE---AAARLLLLLEAEADYEGFLEGVKAaLLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 787 RRVVEAEAHRQLDEAGIAWQPLHAV--LNVDTHTPEQRREWLVQAAGVLFAPV-VAGREAAEAAAAELIEAGLAVPVFEA 863
Cdd:COG1196 550 NIVVEDDEVAAAAIEYLKAAKAGRAtfLPLDKIRARAALAAALARGAIGAAVDlVASDLREADARYYVLGDTLLGRTLVA 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 864 EALTGLLSRGEPPLGAVAGVETLAVKAALDPSYLEALREATEKRLAADRERQKALAVECERLdphgETFALALRAREADE 943
Cdd:COG1196 630 ARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEE----ELELEEALLAEEEE 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 944 AQVEMALEALAERQAELAEREAELAPRLTDVALAciddyqryLQEGGEFAQQEAAEARLEAETALAELAPRCEAAVRELE 1023
Cdd:COG1196 706 ERELAEAEEERLEEELEEEALEEQLEAEREELLE--------ELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
570 580 590
....*....|....*....|....*....|....
gi 1341974154 1024 AHGQ-TWLAAEQFSDAggVERLQALEARLAELER 1056
Cdd:COG1196 778 ALGPvNLLAIEEYEEL--EERYDFLSEQREDLEE 809
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
468-1215 |
7.49e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.29 E-value: 7.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 468 LEELTRELAELDERRDDLEHERERLESQQRDFVDNQSFYTQALAEglfSEAELETPEASAEAAKAEAADARRALNAHLGR 547
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR---LEQQKQILRERLANLERQLEELEAQLEELESK 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 548 VGELKQIAAwhdayrrecpgtAPAERLEEKLEREAELAESLDELTRRRDEALGAFETARAERERLNGERERLTGEQGLLA 627
Cdd:TIGR02168 332 LDELAEELA------------ELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 628 rgqapwrafvegwpgeevsgfwTRRKTALAELESNCREAEQRRQEAErtlARLAPLAEAARryaelhgddepvhlrsrlr 707
Cdd:TIGR02168 400 ----------------------NEIERLEARLERLEDRRERLQQEIE---ELLKKLEEAEL------------------- 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 708 ererelgDERKRLLDEENHLRTLHRARLDFAERSELTPEKWLADARRRYPRLLREAETLEADIAARERYLESLSGDPLER 787
Cdd:TIGR02168 436 -------KELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 788 RVVEAEAHRQLDEAGIAWQPLH---------------------------AVLNVDTHTPEQRREWLVQAAGVLFAPVVAG 840
Cdd:TIGR02168 509 KALLKNQSGLSGILGVLSELISvdegyeaaieaalggrlqavvvenlnaAKKAIAFLKQNELGRVTFLPLDSIKGTEIQG 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 841 REAAEAAAAELIEAGLAVPVFEAEALTGLLSrgePPLGAVAGVETLAVKAALDPSYLEALREATEKRL----------AA 910
Cdd:TIGR02168 589 NDREILKNIEGFLGVAKDLVKFDPKLRKALS---YLLGGVLVVDDLDNALELAKKLRPGYRIVTLDGDlvrpggvitgGS 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 911 DRERQKALAVECERLDPHGETFALALRAREAdEAQVEMALEALAERQAELAEREAELAPRLTDVALACIdDYQRYLQEGG 990
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIAEL-EKALAELRKELEELEEELEQLRKELEELSRQISALRK-DLARLEAEVE 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 991 EFAQQEAAEARLEA--ETALAELAPRCEAAVRELEAHGQTWLAAEQfSDAGGVERLQALEARLAELERHLSEASVRLAAA 1068
Cdd:TIGR02168 744 QLEERIAQLSKELTelEAEIEELEERLEEAEEELAEAEAEIEELEA-QIEQLKEELKALREALDELRAELTLLNEEAANL 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1069 EEQRETLKRQVEETEAQLRgiFSDGERDRLRALARFEAEGGVDFMVTAAEVQEELEAAQARATRRADfdfTRIRAYLEVR 1148
Cdd:TIGR02168 823 RERLESLERRIAATERRLE--DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEE---ALALLRSELE 897
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1341974154 1149 DAAGGSQKLEREIARVRRELGELRETRKARGEERDALEARLAEQrralacIDQLAVEWLRVLRDLPE 1215
Cdd:TIGR02168 898 ELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNL------QERLSEEYSLTLEEAEA 958
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
562-1192 |
8.17e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 8.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 562 RRECPGTAPAERLEEKLEREAELAESLDElTRRRDEALGAFETARAERERLNGERERLT-GEQGLLARGQAPWRAFVEGW 640
Cdd:PTZ00121 1104 KKTETGKAEEARKAEEAKKKAEDARKAEE-ARKAEDARKAEEARKAEDAKRVEIARKAEdARKAEEARKAEDAKKAEAAR 1182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 641 PGEEVSGFWTRRKTALAELESNCREAEQRRQEAERTLARLAPLAEAARRYAELHGDDEPVHLRSRLRERERELGDERKRL 720
Cdd:PTZ00121 1183 KAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARM 1262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 721 LdeenhlrtlHRARLDFAERSEltpEKWLADARRRYPRLlREAEtlEADIAARERYLESLSGDPLERRVVEaEAHRQLDE 800
Cdd:PTZ00121 1263 A---------HFARRQAAIKAE---EARKADELKKAEEK-KKAD--EAKKAEEKKKADEAKKKAEEAKKAD-EAKKKAEE 1326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 801 AGIAWQPLhavlnvdthtpEQRREWLVQAAGVLFAPVVAGREAAEAAAAELIEAGLAVPVFEAEAlTGLLSRGEpplgAV 880
Cdd:PTZ00121 1327 AKKKADAA-----------KKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKA-DAAKKKAE----EK 1390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 881 AGVETLAVKAALDPSYLEALREATEKRLAADRERQKAlavecERLDPHGETFALALRAREADEAQVEMALEALAE---RQ 957
Cdd:PTZ00121 1391 KKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKA-----EEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEeakKK 1465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 958 AELAEREAELAPRLTDVALAciDDYQRYLQEGGEFAQQEAAEARLEAEtalAELAPRCEAAVRELEAHgqtwlAAEqfsd 1037
Cdd:PTZ00121 1466 AEEAKKADEAKKKAEEAKKA--DEAKKKAEEAKKKADEAKKAAEAKKK---ADEAKKAEEAKKADEAK-----KAE---- 1531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1038 aggvERLQALEARLAELERHLSEasvrLAAAEEQRETL-KRQVEETEAQlrgifsdgERDRLRALARFE-----AEGGVD 1111
Cdd:PTZ00121 1532 ----EAKKADEAKKAEEKKKADE----LKKAEELKKAEeKKKAEEAKKA--------EEDKNMALRKAEeakkaEEARIE 1595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1112 FMVTAAEVQEELEAAQARATRRADFDFTRIRAYLEVRDAAGGSQKLEREIAR----VRRELGELR-----ETRKARGEER 1182
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKkaeeLKKAEEENKikaaeEAKKAEEDKK 1675
|
650
....*....|
gi 1341974154 1183 DALEARLAEQ 1192
Cdd:PTZ00121 1676 KAEEAKKAEE 1685
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
897-1230 |
1.67e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 897 LEALREATEKRLAADRERQKALAVECERLDPHGETFALALRAREADEAQVEMALEALAERQAELAEREAELAPRLTDVaL 976
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANL-E 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 977 ACIDDYQRYLQEGGEfAQQEAAEARLEAETALAELAPRCEAAVRELEAHGQTWlaaeqfsdaggverlQALEARLAELER 1056
Cdd:TIGR02168 316 RQLEELEAQLEELES-KLDELAEELAELEEKLEELKEELESLEAELEELEAEL---------------EELESRLEELEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1057 HLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDGERDRLRALARFEAEGGVDFMVTAAEVQEELEAAQARATRRADF 1136
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1137 DFTRIRAYLEVRDAAGGSQKLEREIARVRRELGELrETRKARGEERDALEARLAEQRRALACIDQLAVEWLRVlrdlPEG 1216
Cdd:TIGR02168 460 EEALEELREELEEAEQALDAAERELAQLQARLDSL-ERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISV----DEG 534
|
330
....*....|....
gi 1341974154 1217 WprRLAALVDLAEA 1230
Cdd:TIGR02168 535 Y--EAAIEAALGGR 546
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
884-1193 |
4.12e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.95 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 884 ETLAVKAALDPSYLEALREATEKRlaadRERQKALAVECERLDphgETFALALRAREADEAQVEMALEALAERQAELAER 963
Cdd:PRK02224 359 EELREEAAELESELEEAREAVEDR----REEIEELEEEIEELR---ERFGDAPVDLGNAEDFLEELREERDELREREAEL 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 964 EAELAPRLTDVALAciddyqRYLQEGGEFAQQEAAEARLEAETALAElaprCEAAVRELEAhgqtwlaaeQFSDAGgvER 1043
Cdd:PRK02224 432 EATLRTARERVEEA------EALLEAGKCPECGQPVEGSPHVETIEE----DRERVEELEA---------ELEDLE--EE 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1044 LQALEARLAELERhLSEASVRLAAAEEQRETLKRQVEETEAQLrgifsDGERDRLRALARFEAEGGVDFMVTAAEVQEEL 1123
Cdd:PRK02224 491 VEEVEERLERAED-LVEAEDRIERLEERREDLEELIAERRETI-----EEKRERAEELRERAAELEAEAEEKREAAAEAE 564
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1124 EAAQARATRRADFDfTRIRAYLEVRDAAGGSQKLEREIARVRRELGELRETRKARGEERDALEARLAEQR 1193
Cdd:PRK02224 565 EEAEEAREEVAELN-SKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKR 633
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
897-1368 |
1.81e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.20 E-value: 1.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 897 LEALREATEKRLAADRERQKALAVECERLDPHGETFALALRAREADEAQVEMALEALAERQAELAEREAELAPRLTDVAL 976
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 977 ACIDDYQRYLQEGGEFAQQEAAEARLEAETALAELAP----RCEAAVRELEAHGQTWLAAEQFSDAGGVERLQALEARLA 1052
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALaeleEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1053 ELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDGERDRLRALARFEAEGGVDFMVTAAEVQEELEAAQARATR 1132
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVV 553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1133 RADFDFTRIRAYLevRDAAGGSQKLEREIARVRRELGELRETRKARGEERDALEARLAEQRRALACIDQLAVEWLRVLRD 1212
Cdd:COG1196 554 EDDEVAAAAIEYL--KAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAAR 631
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1213 LPEGWPRRLAALVDLAEASrwpGEADEHAARNAALdawhdmTGSEGQGELDIEALEACQQTLVDALGELNLGEQARNRER 1292
Cdd:COG1196 632 LEAALRRAVTLAGRLREVT---LEGEGGSAGGSLT------GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAE 702
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1341974154 1293 QARQVEGGERKLAEALAEAAHSRMFSDTERARLAGLTHASAEALDDLSRLHDQLAG--QLDDHKVRVERLHASREQIE 1368
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEppDLEELERELERLEREIEALG 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
645-1284 |
1.25e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.42 E-value: 1.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 645 VSGFWTRRKTALAELES---NCREAEQRRQEAERTLARLAPLAEAARRYAELHGDDEpvHLRSRLRERERELGDERKRLL 721
Cdd:COG1196 167 ISKYKERKEEAERKLEAteeNLERLEDILGELERQLEPLERQAEKAERYRELKEELK--ELEAELLLLKLRELEAELEEL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 722 DEENHLRTLHRARLDfAERSELtpEKWLADARRRYPRLLREAETLEADIAARERYLESLSGDplERRVVEAEAHRQLDEA 801
Cdd:COG1196 245 EAELEELEAELEELE-AELAEL--EAELEELRLELEELELELEEAQAEEYELLAELARLEQD--IARLEERRRELEERLE 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 802 GIAWQpLHAVLNVDTHTPEQRREWLVQAAgvLFAPVVAGREAAEAAAAELIEAGLAVPVFEAEALTGLLSRGEPPLGAVA 881
Cdd:COG1196 320 ELEEE-LAELEEELEELEEELEELEEELE--EAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 882 GVETLAVKAALDPSYLEALREATEKRLAADRERQKALAVECERLdphgetfALALRAREADEAQVEMALEALAERQAELA 961
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE-------EEALEEAAEEEAELEEEEEALLELLAELL 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 962 EREAELAPRLTDVALACIDDYQRYLQEGGEFAQQEAAEARLEAETALAELAPRCEAAVRELEAHGQTWLAAEQFSDAGGV 1041
Cdd:COG1196 470 EEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQ 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1042 ERLQALEARLAELERHLSEAsvRLAAAEEQRETLKRQVEETEAQLRGIFSDGERDRLRALARFEAEGGVDFMVTAAEVQE 1121
Cdd:COG1196 550 NIVVEDDEVAAAAIEYLKAA--KAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1122 ELEAAQARATRRAdfdfTRIRAYLEVRDAAGGSQKLEREIARVRRELGELRETRKARGEERDALEARLAEQRRAlaciDQ 1201
Cdd:COG1196 628 VAARLEAALRRAV----TLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE----AL 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1202 LAVEWLRVLRDLPEGWPRRLAALVDLAEASRWPGEADEHAARNAALDAWHDMTGSEGQGELDIEALEACQQTL---VDAL 1278
Cdd:COG1196 700 LAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLereIEAL 779
|
....*.
gi 1341974154 1279 GELNLG 1284
Cdd:COG1196 780 GPVNLL 785
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
906-1462 |
1.67e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.03 E-value: 1.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 906 KRLAADRERQ---KALAVECERLDphGETFALALRAREADEAQVEMALEALAERQAELAEREAELAPRLTDVALACIDDY 982
Cdd:COG1196 203 EPLERQAEKAeryRELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 983 QRYLQEGGEFAQQEAAEARLEAETALAELApRCEAAVRELEAHGQtwLAAEQFSDAGGVERLQALEARLAELERHLSEAS 1062
Cdd:COG1196 281 LELEEAQAEEYELLAELARLEQDIARLEER-RRELEERLEELEEE--LAELEEELEELEEELEELEEELEEAEEELEEAE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1063 VRLAAAEEQRETLKRQVEETEAQLRGIFSDgERDRLRALARFEAEggvdfMVTAAEVQEELEAAQARATRRADFDFTRIR 1142
Cdd:COG1196 358 AELAEAEEALLEAEAELAEAEEELEELAEE-LLEALRAAAELAAQ-----LEELEEAEEALLERLERLEEELEELEEALA 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1143 AYLEVRDAAGGS-QKLEREIARVRRELGELRETRKARGEERDALEARLAEQRRALACIDQ---LAVEWLRVLRDLPEGWP 1218
Cdd:COG1196 432 ELEEEEEEEEEAlEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAArllLLLEAEADYEGFLEGVK 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1219 RRLAAL------VDLAEASRWPGEADEHAARNAALDAWHDMTGSEGQGELDIEALEACQQTLVDALGELNLGEQARNRER 1292
Cdd:COG1196 512 AALLLAglrglaGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAA 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1293 QARQVEGGERKLAEALAEAAHSRMFSDTERARLAGLTHASAEALDDLSRLHDQLAGqlddhkvrverlhasREQIEGTLV 1372
Cdd:COG1196 592 LARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLR---------------EVTLEGEGG 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1373 ERLSSIISDAAGNLDILKRVAKSSgeggaffEVKASLIGPDQLRDLIATLLADIDEHQAAMRRRAERDGGMVDGEARRRD 1452
Cdd:COG1196 657 SAGGSLTGGSRRELLAALLEAEAE-------LEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQ 729
|
570
....*....|
gi 1341974154 1453 DDLLRQIRRR 1462
Cdd:COG1196 730 LEAEREELLE 739
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
582-1163 |
1.67e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.03 E-value: 1.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 582 AELAESLDELTRRRDEALGAFETARAERERLNGERERLTGEQGLLARgqapwrafvegwpgeevsgfwtrrktALAELES 661
Cdd:COG1196 249 EELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA--------------------------ELARLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 662 NCREAEQRRQEAERTLARLAP-----LAEAARRYAELHGDDEPVHLRSRLRERERELGDERKRLLDEENHLRTLHRARLD 736
Cdd:COG1196 303 DIARLEERRRELEERLEELEEelaelEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 737 FAERSELTPEKWLADARRRYPRLLREAETLEADIAARERYLESLSGDPLERRVVEAEAHRQLDEAGIAWQPLHAVLNVDT 816
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 817 HTPEQRREWLVQAAgvlfAPVVAGREAAEAAAAELIEAGLAVPVFEAEALTGLLSRGEPPLGAVAGVetLAVKAALDPSY 896
Cdd:COG1196 463 ELLAELLEEAALLE----AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGA--VAVLIGVEAAY 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 897 LEALREATEKRLAADRERQKALAVECerldphgetfALALRAREADEAQVEMALEALAERQAELAEREAELAPRLTDVAL 976
Cdd:COG1196 537 EAALEAALAAALQNIVVEDDEVAAAA----------IEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAS 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 977 ACIDDYQRYLQEGGEFAQQEAAEARLEAETALAELAPRCEAAVRELEAHGQTWLAAEQFSDAGGVERLQALEARLAELER 1056
Cdd:COG1196 607 DLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1057 HLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDGERDRLRALARFEAEggvdfmVTAAEVQEELEAAQARATRRADF 1136
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREEL------LEELLEEEELLEEEALEELPEPP 760
|
570 580
....*....|....*....|....*..
gi 1341974154 1137 DFTRIRAYLEvrdaaggsqKLEREIAR 1163
Cdd:COG1196 761 DLEELERELE---------RLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
468-1056 |
5.22e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.56 E-value: 5.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 468 LEELTRELAELDERRDDLEHERERLESQQRDFVDNQSFYTQALAEGLFSEAELETPEASAEAAKAEAADARRALNAhlgr 547
Cdd:COG1196 276 LEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE---- 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 548 vgELKQIAAwhdayrrecpgtAPAERLEEKLEREAELAESLDELTRRRDEALGAFETARAERERLNGERERLTGEQGLLA 627
Cdd:COG1196 352 --ELEEAEA------------ELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLE 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 628 rgqapwrafvegwpgeevsgfwtRRKTALAELESNCREAEQRRQEAERTLARLAplAEAARRYAELHGDDEPVHLRSRLR 707
Cdd:COG1196 418 -----------------------RLEEELEELEEALAELEEEEEEEEEALEEAA--EEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 708 ERERELGDERKRLLDEenhLRTLHRARLDFAERSELTPEKWLA-DARRRYPRLLREAETLEADIAARERYLESLSGDPLE 786
Cdd:COG1196 473 ALLEAALAELLEELAE---AAARLLLLLEAEADYEGFLEGVKAaLLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 787 RRVVEAEAHRQLDEAGIAWQPLHAV--LNVDTHTPEQRREWLVQAAGVLFAPV-VAGREAAEAAAAELIEAGLAVPVFEA 863
Cdd:COG1196 550 NIVVEDDEVAAAAIEYLKAAKAGRAtfLPLDKIRARAALAAALARGAIGAAVDlVASDLREADARYYVLGDTLLGRTLVA 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 864 EALTGLLSRGEPPLGAVAGVETLAVKAALDPSYLEALREATEKRLAADRERQKALAVECERLdphgETFALALRAREADE 943
Cdd:COG1196 630 ARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEE----ELELEEALLAEEEE 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 944 AQVEMALEALAERQAELAEREAELAPRLTDVALAciddyqryLQEGGEFAQQEAAEARLEAETALAELAPRCEAAVRELE 1023
Cdd:COG1196 706 ERELAEAEEERLEEELEEEALEEQLEAEREELLE--------ELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
570 580 590
....*....|....*....|....*....|....
gi 1341974154 1024 AHGQ-TWLAAEQFSDAggVERLQALEARLAELER 1056
Cdd:COG1196 778 ALGPvNLLAIEEYEEL--EERYDFLSEQREDLEE 809
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
468-1077 |
5.40e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.56 E-value: 5.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 468 LEELTRELAELDERRDDLEHERE-----------------------------RLESQQRDFVDNQSFYTQALAEGLFSEA 518
Cdd:COG1196 188 LERLEDILGELERQLEPLERQAEkaeryrelkeelkeleaellllklreleaELEELEAELEELEAELEELEAELAELEA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 519 ELETPEASAEAAKAEAADARRALNAHLGRVGELKQIAAwhdayrrecpgtapaerleEKLEREAELAESLDELTRRRDEA 598
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIA-------------------RLEERRRELEERLEELEEELAEL 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 599 LGAFETARAERERLNGERERLTGEQGLLArgqapwrafvegwpgEEVSGFWTRRKTALAELESNCREAEQRRQEAERTLA 678
Cdd:COG1196 329 EEELEELEEELEELEEELEEAEEELEEAE---------------AELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 679 RLAPLAEAARRYAELHGDDEpvHLRSRLRERERELGDERKRLLDEENHLRTLHRARLDFAERSELTpekwLADARRRYPR 758
Cdd:COG1196 394 AAAELAAQLEELEEAEEALL--ERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE----EEALLELLAE 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 759 LLREAETLEADIAARERYLESLSgdPLERRVVEAEAHRQLDEAGI-------AWQPLHAVLNVDTHTPEQRREWLVQAAG 831
Cdd:COG1196 468 LLEEAALLEAALAELLEELAEAA--ARLLLLLEAEADYEGFLEGVkaalllaGLRGLAGAVAVLIGVEAAYEAALEAALA 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 832 VLFAPVVAGREAAEAAAAELIEAGLAVPVFEAEALTGLLSRGEPPLGAVAGVETLAVKAALDPSYLEALREATEKRLAAD 911
Cdd:COG1196 546 AALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGR 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 912 RERQKALAVECERLDPHGETFALALRAREADEAQVEMALEALAERQAELAEREAELApRLTDVALACIDDYQRYLQEGGE 991
Cdd:COG1196 626 TLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELE-ELAERLAEEELELEEALLAEEE 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 992 FAQQEAAEARLEAETALAELAPRCEAAVRELEAHGQTWLAAEQFSDAGGVE-----RLQALEARLAELERHLSEA-SVRL 1065
Cdd:COG1196 705 EERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEElpeppDLEELERELERLEREIEALgPVNL 784
|
650
....*....|..
gi 1341974154 1066 AAAEEQRETLKR 1077
Cdd:COG1196 785 LAIEEYEELEER 796
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
468-1215 |
7.49e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.29 E-value: 7.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 468 LEELTRELAELDERRDDLEHERERLESQQRDFVDNQSFYTQALAEglfSEAELETPEASAEAAKAEAADARRALNAHLGR 547
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISR---LEQQKQILRERLANLERQLEELEAQLEELESK 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 548 VGELKQIAAwhdayrrecpgtAPAERLEEKLEREAELAESLDELTRRRDEALGAFETARAERERLNGERERLTGEQGLLA 627
Cdd:TIGR02168 332 LDELAEELA------------ELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 628 rgqapwrafvegwpgeevsgfwTRRKTALAELESNCREAEQRRQEAErtlARLAPLAEAARryaelhgddepvhlrsrlr 707
Cdd:TIGR02168 400 ----------------------NEIERLEARLERLEDRRERLQQEIE---ELLKKLEEAEL------------------- 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 708 ererelgDERKRLLDEENHLRTLHRARLDFAERSELTPEKWLADARRRYPRLLREAETLEADIAARERYLESLSGDPLER 787
Cdd:TIGR02168 436 -------KELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 788 RVVEAEAHRQLDEAGIAWQPLH---------------------------AVLNVDTHTPEQRREWLVQAAGVLFAPVVAG 840
Cdd:TIGR02168 509 KALLKNQSGLSGILGVLSELISvdegyeaaieaalggrlqavvvenlnaAKKAIAFLKQNELGRVTFLPLDSIKGTEIQG 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 841 REAAEAAAAELIEAGLAVPVFEAEALTGLLSrgePPLGAVAGVETLAVKAALDPSYLEALREATEKRL----------AA 910
Cdd:TIGR02168 589 NDREILKNIEGFLGVAKDLVKFDPKLRKALS---YLLGGVLVVDDLDNALELAKKLRPGYRIVTLDGDlvrpggvitgGS 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 911 DRERQKALAVECERLDPHGETFALALRAREAdEAQVEMALEALAERQAELAEREAELAPRLTDVALACIdDYQRYLQEGG 990
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIAEL-EKALAELRKELEELEEELEQLRKELEELSRQISALRK-DLARLEAEVE 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 991 EFAQQEAAEARLEA--ETALAELAPRCEAAVRELEAHGQTWLAAEQfSDAGGVERLQALEARLAELERHLSEASVRLAAA 1068
Cdd:TIGR02168 744 QLEERIAQLSKELTelEAEIEELEERLEEAEEELAEAEAEIEELEA-QIEQLKEELKALREALDELRAELTLLNEEAANL 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1069 EEQRETLKRQVEETEAQLRgiFSDGERDRLRALARFEAEGGVDFMVTAAEVQEELEAAQARATRRADfdfTRIRAYLEVR 1148
Cdd:TIGR02168 823 RERLESLERRIAATERRLE--DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEE---ALALLRSELE 897
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1341974154 1149 DAAGGSQKLEREIARVRRELGELRETRKARGEERDALEARLAEQrralacIDQLAVEWLRVLRDLPE 1215
Cdd:TIGR02168 898 ELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNL------QERLSEEYSLTLEEAEA 958
|
|
| PksD |
COG3321 |
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ... |
339-882 |
1.28e-06 |
|
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain] Cd Length: 1386 Bit Score: 53.72 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 339 DDAEARGVAPLDGFAWIAgdTSRPRVSTSLLATLSGLSERAVRQALSERGARVDVHRRLIHLPQAEWPLNRDVGHVSFKA 418
Cdd:COG3321 853 YPGRGRRRVPLPTYPFQR--EDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALL 930
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 419 AREWLAESHALADDTARDRALSALDEGADAFEAADGNRFREEVIGDGVYLEELTRELAELDERRDDLEHERERLESQQRD 498
Cdd:COG3321 931 ALVALAAAAAALLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAAL 1010
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 499 FVdnqsfytqALAEGLFSEAELETPEASAEAAKAEAADARRALNAHLGRVGELKQIAAWHDAYRRECPGTAPAERLEEKL 578
Cdd:COG3321 1011 LL--------AAAAAAAALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAA 1082
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 579 EREAELAESLDELTRRRDEALGAFETARAERERLNGERERLTGEQGLLARGQAPWRAFVEGWPGEEVSGFWTRRKTALAE 658
Cdd:COG3321 1083 ALALAAALAAAALALALAALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAA 1162
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 659 LESNCREAEQRRQEAERTLARLAPLAEAARRYAELHGDDEPVHLRSRLRERERELGDERKRLLDEENHLRTLHRARLDFA 738
Cdd:COG3321 1163 LAAALLAAAALLLALALALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAA 1242
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 739 ERSELTPEKWLADARRRYPRLLREAETLEADIAARERYLESLSGDPLERRVVEAEAHRQLDEAGIAWQPLHAVLNVDTHT 818
Cdd:COG3321 1243 AAVAALAAAAAALLAALAALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALA 1322
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1341974154 819 PEQRREWLVQAAGVLFAPVVAGREAAEAAAAELIEAGLAVPVFEAEALTGLLSRGEPPLGAVAG 882
Cdd:COG3321 1323 AALLAAALAALAAAVAAALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAAALALAALAAAVA 1386
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
649-1085 |
2.02e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.46 E-value: 2.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 649 WTRRKTALAELESNCREAEQRRQEAERTLARLAPLAEAARRYAELHGDDEPVHLRSRLRERERELGDERKRLLDE----E 724
Cdd:COG4717 90 YAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEEleelE 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 725 NHLRTLHRARLDFAERSELTPEKWLADARRRYPRLLREAETLEADIAARERYLESLSG--DPLERRVVEAEAHRQLDEAg 802
Cdd:COG4717 170 AELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEelEQLENELEAAALEERLKEA- 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 803 iawqplhavlnvdthtpeqrrEWLVQAAGVLFAPVVAGREAAEAAAAELIEAGLAVpvfeaealtGLLSRGEPPLGAVAG 882
Cdd:COG4717 249 ---------------------RLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVL---------GLLALLFLLLAREKA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 883 VETLAVKAALDPSYLEALREATEKRLAADRERQKALAVEcerldphgETFALALRAREADEAQVEMaleALAERQAELAE 962
Cdd:COG4717 299 SLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPE--------ELLELLDRIEELQELLREA---EELEEELQLEE 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 963 REAELAPRLTDVALACIDDYQRYLQEGGEFAQQEAAEARLEAETALAELAPRCEAAVRELEAHGQTWLAAEQFSDAgGVE 1042
Cdd:COG4717 368 LEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEE-LEE 446
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1341974154 1043 RLQALEARLAELERHLS--EASVRLAAAEEQRETLKRQVEETEAQ 1085
Cdd:COG4717 447 ELEELREELAELEAELEqlEEDGELAELLQELEELKAELRELAEE 491
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
262-801 |
2.09e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.63 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 262 ITELRHRLEEAESDQRRASDKVLRL-AELREQGETLRDARARLSELDQGLAASEALLGGQALLGLPGLPRAAAENDAEDD 340
Cdd:COG1196 276 LEELELELEEAQAEEYELLAELARLeQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 341 AEARgvapldgfawiagdtsrprvstslLATLSGLSERAVRQALSERGARVDVHRRLIHLPQAEWPLNRDVGHVSFKAAR 420
Cdd:COG1196 356 AEAE------------------------LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEA 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 421 EWLAESHALADDTARDRALSALDEGADAFEAADGNRFREEvigdgvylEELTRELAELDERRDDLEHERERLESQQRDfv 500
Cdd:COG1196 412 LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE--------AELEEEEEALLELLAELLEEAALLEAALAE-- 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 501 dnqsfyTQALAEGLFSEAELETPEASAEAAKAEAADARRALNAHLGRVGELKQIAAWHDAYRRECPGTAPAERLEEKLER 580
Cdd:COG1196 482 ------LLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVED 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 581 EAELAESLDELTRRRDealgafetARAERERLNGERERLTGEQGLLARGQAPWRAFVEGWPgEEVSGFWTRRKTALAELE 660
Cdd:COG1196 556 DEVAAAAIEYLKAAKA--------GRATFLPLDKIRARAALAAALARGAIGAAVDLVASDL-READARYYVLGDTLLGRT 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 661 SNCREAEQRRQEAERTLARLAPLAEA-----ARRYAELHGDDEPVHLRSRLRERERELGDERKRLLDEENHLRTLHRARL 735
Cdd:COG1196 627 LVAARLEAALRRAVTLAGRLREVTLEgeggsAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEE 706
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1341974154 736 DFAERSELTPEKWLADARRRYPRLLREAETLEADIAARERYLESLSGDPLERRVVEAEAHRQLDEA 801
Cdd:COG1196 707 RELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERL 772
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1016-1232 |
2.41e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 2.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1016 EAAVRELEAHgQTWLAAEQFSDAGGVERLQALEARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIfSDGER 1095
Cdd:COG4942 30 EQLQQEIAEL-EKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ-KEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1096 DRLRALARFEAEGGVDFMVTAAEVQeeleaaqaratrradfDFTRIRAYLEvrdaaGGSQKLEREIARVRRELGELRETR 1175
Cdd:COG4942 108 ELLRALYRLGRQPPLALLLSPEDFL----------------DAVRRLQYLK-----YLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1341974154 1176 KARGEERDALEARLAEQRRALACIDQLAVEWLRVLRDLPEGWPRRLAALVDLAEASR 1232
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAE 223
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
243-780 |
3.72e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.86 E-value: 3.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 243 ETDESEELIEEVILNSGTNITELRHRLEEAESDQRRASDKVLRL-AELREQGETLRDARARLSELDQGLAASEALLGGQA 321
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELeLELEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 322 LLGLPGLPRAAAENDAEDDAEARGVAPLDGFAWIAGDTsrpRVSTSLLATLSGLSERAVRQALSERGARVDVHRRLIHLP 401
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEEL---EEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 402 QAEWPLNRDVGHVSFKAAREWLAESHALADDTARDRALSALDEGADAFEAADGNRFREEvigdgvylEELTRELAELDER 481
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE--------AELEEEEEALLEL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 482 RDDLEHERERLESQQRDfvdnqsfyTQALAEGLFSEAELETPEASAEAAKAEAADARRALNAHLGRVGELKQIAAWHDAY 561
Cdd:COG1196 465 LAELLEEAALLEAALAE--------LLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAY 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 562 RRECPGTAPAERLEEKLEREAELAESLDELTRRR--------------------DEALGAFETARAERERLNGERERLTG 621
Cdd:COG1196 537 EAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKagratflpldkiraraalaaALARGAIGAAVDLVASDLREADARYY 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 622 EQGLLARGQAPWRAFVEGWPGEEVSGFWTRRKTALAELESNCREAEQRRQEAERTLARLAPLAEAARRYAELHGDDEPVH 701
Cdd:COG1196 617 VLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELE 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 702 LRSRLRERERELGDERKRLLDEENHLRTLHRARLDFAERS----ELTPEKWLADARRRYPRLLREAETLEADIAARERYL 777
Cdd:COG1196 697 EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREElleeLLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
...
gi 1341974154 778 ESL 780
Cdd:COG1196 777 EAL 779
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
856-1242 |
1.41e-05 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 50.02 E-value: 1.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 856 LAVPVFEAEALTGLLSRGEPPLGAVAGVETLAVKAALDPSYLEALREATEKRLAADRERQKALAVECERLDPHGETFALA 935
Cdd:COG3903 547 LAAALAPFWFLRGLLREGRRWLERALAAAGEAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLL 626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 936 LRAREADEAQVEMALEALAERQAELAEREAELAPRLTDVALACIDDYQRYLQEGGEFAQQEAAEARLEAETALAELAPRC 1015
Cdd:COG3903 627 AALAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAA 706
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1016 EAAVRELEAHGQTWLAAEQFSDAGGVERLQALEARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDGER 1095
Cdd:COG3903 707 AAAALAAAAAAAAAAAAAAALLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAAAL 786
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1096 DRLRALARFEAEGGVDFMVTAAEVQEELEAAQARATRRADFDFTRIRAYLEVRDAAGGSQKLEREIARVRRELGELRETR 1175
Cdd:COG3903 787 AAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAALAAALAAAAAAAAAAAAAAAAAAALAAALAAAAAAAA 866
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1341974154 1176 KARGEERDALEARLAEQRRALACIDQLAVEWLRVLRDLPEGWPRRLAALVDLAEASRWPGEADEHAA 1242
Cdd:COG3903 867 AAALAAAAAAAAAAAAALLAAAAAAAAAAAAAAAAAAALAAAAAAAAAAALAAAAAAAAAAAAAAAA 933
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1042-1208 |
2.10e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1042 ERLQALEARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDgerDRLRALARfeaeggvdfmvTAAEVQE 1121
Cdd:COG4913 610 AKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDE---IDVASAER-----------EIAELEA 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1122 ELEaaqarATRRADFDFTRIRAYLEvrdaaggsqKLEREIARVRRELGELRETRKARGEERDALEARLAEQRRALACIDQ 1201
Cdd:COG4913 676 ELE-----RLDASSDDLAALEEQLE---------ELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED 741
|
....*..
gi 1341974154 1202 LAVEWLR 1208
Cdd:COG4913 742 LARLELR 748
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
562-1192 |
8.17e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 8.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 562 RRECPGTAPAERLEEKLEREAELAESLDElTRRRDEALGAFETARAERERLNGERERLT-GEQGLLARGQAPWRAFVEGW 640
Cdd:PTZ00121 1104 KKTETGKAEEARKAEEAKKKAEDARKAEE-ARKAEDARKAEEARKAEDAKRVEIARKAEdARKAEEARKAEDAKKAEAAR 1182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 641 PGEEVSGFWTRRKTALAELESNCREAEQRRQEAERTLARLAPLAEAARRYAELHGDDEPVHLRSRLRERERELGDERKRL 720
Cdd:PTZ00121 1183 KAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARM 1262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 721 LdeenhlrtlHRARLDFAERSEltpEKWLADARRRYPRLlREAEtlEADIAARERYLESLSGDPLERRVVEaEAHRQLDE 800
Cdd:PTZ00121 1263 A---------HFARRQAAIKAE---EARKADELKKAEEK-KKAD--EAKKAEEKKKADEAKKKAEEAKKAD-EAKKKAEE 1326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 801 AGIAWQPLhavlnvdthtpEQRREWLVQAAGVLFAPVVAGREAAEAAAAELIEAGLAVPVFEAEAlTGLLSRGEpplgAV 880
Cdd:PTZ00121 1327 AKKKADAA-----------KKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKA-DAAKKKAE----EK 1390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 881 AGVETLAVKAALDPSYLEALREATEKRLAADRERQKAlavecERLDPHGETFALALRAREADEAQVEMALEALAE---RQ 957
Cdd:PTZ00121 1391 KKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKA-----EEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEeakKK 1465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 958 AELAEREAELAPRLTDVALAciDDYQRYLQEGGEFAQQEAAEARLEAEtalAELAPRCEAAVRELEAHgqtwlAAEqfsd 1037
Cdd:PTZ00121 1466 AEEAKKADEAKKKAEEAKKA--DEAKKKAEEAKKKADEAKKAAEAKKK---ADEAKKAEEAKKADEAK-----KAE---- 1531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1038 aggvERLQALEARLAELERHLSEasvrLAAAEEQRETL-KRQVEETEAQlrgifsdgERDRLRALARFE-----AEGGVD 1111
Cdd:PTZ00121 1532 ----EAKKADEAKKAEEKKKADE----LKKAEELKKAEeKKKAEEAKKA--------EEDKNMALRKAEeakkaEEARIE 1595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1112 FMVTAAEVQEELEAAQARATRRADFDFTRIRAYLEVRDAAGGSQKLEREIAR----VRRELGELR-----ETRKARGEER 1182
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKkaeeLKKAEEENKikaaeEAKKAEEDKK 1675
|
650
....*....|
gi 1341974154 1183 DALEARLAEQ 1192
Cdd:PTZ00121 1676 KAEEAKKAEE 1685
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1008-1194 |
1.07e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1008 LAELAPRCEAAVRELEAHGQtwlAAEQFSDAGGVERLQALEARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLR 1087
Cdd:COG4913 257 IRELAERYAAARERLAELEY---LRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIR 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1088 GifSDGER-DRLRALARfEAEGGVDFMVTAAEVQEELEAAQARATRRADFDFTRIRaylevRDAAGGSQKLEREIARVRR 1166
Cdd:COG4913 334 G--NGGDRlEQLEREIE-RLERELEERERRRARLEALLAALGLPLPASAEEFAALR-----AEAAALLEALEEELEALEE 405
|
170 180
....*....|....*....|....*...
gi 1341974154 1167 ELGELRETRKARGEERDALEARLAEQRR 1194
Cdd:COG4913 406 ALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
897-1230 |
1.67e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 897 LEALREATEKRLAADRERQKALAVECERLDPHGETFALALRAREADEAQVEMALEALAERQAELAEREAELAPRLTDVaL 976
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANL-E 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 977 ACIDDYQRYLQEGGEfAQQEAAEARLEAETALAELAPRCEAAVRELEAHGQTWlaaeqfsdaggverlQALEARLAELER 1056
Cdd:TIGR02168 316 RQLEELEAQLEELES-KLDELAEELAELEEKLEELKEELESLEAELEELEAEL---------------EELESRLEELEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1057 HLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDGERDRLRALARFEAEGGVDFMVTAAEVQEELEAAQARATRRADF 1136
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1137 DFTRIRAYLEVRDAAGGSQKLEREIARVRRELGELrETRKARGEERDALEARLAEQRRALACIDQLAVEWLRVlrdlPEG 1216
Cdd:TIGR02168 460 EEALEELREELEEAEQALDAAERELAQLQARLDSL-ERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISV----DEG 534
|
330
....*....|....
gi 1341974154 1217 WprRLAALVDLAEA 1230
Cdd:TIGR02168 535 Y--EAAIEAALGGR 546
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
949-1109 |
3.06e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 949 ALEALAERQAELAEREAELAPRLTDVALAcIDDYQRYLQEGGEFAQQE-AAEARLEAETALAELaprcEAAVRELEAHGQ 1027
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAE-LDALQERREALQRLAEYSwDEIDVASAEREIAEL----EAELERLDASSD 685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1028 TWLAAEQfsdaggveRLQALEARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDGE-RDRLRALARFEA 1106
Cdd:COG4913 686 DLAALEE--------QLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARlELRALLEERFAA 757
|
...
gi 1341974154 1107 EGG 1109
Cdd:COG4913 758 ALG 760
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
894-1197 |
4.28e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.06 E-value: 4.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 894 PSYLEALREATEKRLAADRERQkALAVECERLDphGETFALALRAREAdeaqvEMALEALAERQAELAEREAELAPRLTD 973
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELS-SLQSELRRIE--NRLDELSQELSDA-----SRKIGEIEKEIEQLEQEEEKLKERLEE 741
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 974 VAlacidDYQRYLQEGGEFAQQEAAEARLEAETALAELApRCEAAVRELEAHgqtwLAAEQFSDAGGV-----ERLQALE 1048
Cdd:TIGR02169 742 LE-----EDLSSLEQEIENVKSELKELEARIEELEEDLH-KLEEALNDLEAR----LSHSRIPEIQAElskleEEVSRIE 811
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1049 ARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDGERDRLRAlarfeaeggvdfmvtaAEVQEELEaaqa 1128
Cdd:TIGR02169 812 ARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKK----------------EELEEELE---- 871
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1341974154 1129 ratrradfdftriRAYLEVRDAAGGSQKLEREIARVRRELGELRETRKARGEERDALEARLAEQRRALA 1197
Cdd:TIGR02169 872 -------------ELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLE 927
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
955-1196 |
7.68e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 44.28 E-value: 7.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 955 ERQAELAEREAELAPRLTDVALAC-IDDYQRYLQEGGEFAQQeaaearleaetaLAELAPRCEAAVRELEAHGQTWlaaE 1033
Cdd:TIGR02168 206 ERQAEKAERYKELKAELRELELALlVLRLEELREELEELQEE------------LKEAEEELEELTAELQELEEKL---E 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1034 QFSDAGGV--ERLQALEARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSDGERDRLRaLARFEAEggvd 1111
Cdd:TIGR02168 271 ELRLEVSEleEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEE-LAELEEK---- 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1112 FMVTAAEVQEELEAAQARATRRADFDFTRIRAYLEVRDAAGGSQKLEREIARVRRELGELRETRKARGEERDALEARLAE 1191
Cdd:TIGR02168 346 LEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEE 425
|
....*
gi 1341974154 1192 QRRAL 1196
Cdd:TIGR02168 426 LLKKL 430
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1042-1246 |
1.02e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1042 ERLQALEARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLrgifsDGERDRLRALARFEAEGG-----VDFMVTA 1116
Cdd:COG3883 37 AELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEI-----EERREELGERARALYRSGgsvsyLDVLLGS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1117 AEVQEELEaAQARATRRADFDFTRIRAYLEVRdaaggsQKLEREIARVRRELGELRETRKARGEERDALEARLAEQRRAL 1196
Cdd:COG3883 112 ESFSDFLD-RLSALSKIADADADLLEELKADK------AELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALL 184
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1197 ACIDQLAVEWLRVLRDLPEGWPRRLAALVDLAEASRWPGEADEHAARNAA 1246
Cdd:COG3883 185 AQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAA 234
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
591-1087 |
1.20e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 43.69 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 591 LTRRRDEALGAFETARAERERLNGERERLTGEQGLLARGQAPWRAFVEGWPGEEVSGFWTRRKTALAELESNCREAEQRR 670
Cdd:COG3899 748 LLELAEALYLAGRFEEAEALLERALAARALAALAALRHGNPPASARAYANLGLLLLGDYEEAYEFGELALALAERLGDRR 827
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 671 QEAERTLARLAPLAEAARRYAELHGDDEPVHLRSRLRERERELGDERKRLLDEENHLRTLHRARLDFAERSELTPEKWLA 750
Cdd:COG3899 828 LEARALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLALAAAAAAAAAAAALAAAAAAAARLLAAAAAALAAA 907
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 751 DARRRYPRLLREAETLEADIAARERYLESLSGDPLERRVVEAEAHRQLDEAGIAWQPLHAVLNVDTHTPEQRREWLVQAA 830
Cdd:COG3899 908 AAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAALAAALALAAAAAAAAAAALAAAAAAAAAAAAAAA 987
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 831 GVLFAPVVAGREAAEAAAAELIEAGLAVPVFEAEALTGLLSRGEPPLGAVAGVETLAVKAALDPSYLEALREATEKRLAA 910
Cdd:COG3899 988 AAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLAAAAALALLAALAAAAAAAAAAAALAAAAA 1067
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 911 DRERQKALAVECERLDPHGETFALALRAREADEAQVEMALEALAERQAELAEREAELAPRLTDVALACIDDYQRYLQEGG 990
Cdd:COG3899 1068 LLAAAAAAAAAAAAAAAAAALAAALAAAALAAAAAAALALAAALAALALAAALAALALAAAARAAAALLLLAAALALALA 1147
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 991 EFAQQEAAEARLEAETALAELAPRCEAAVRELEAHGQTWLAAEQFSDAGGVERLQALEARLAELERHLSEASVRLAAAEE 1070
Cdd:COG3899 1148 ALLLLAALLLALALLLLALAALALAAALAALAAALLAAAAAAAAAAALLAALLALAARLAALLALALLALEAAALLLLLL 1227
|
490
....*....|....*..
gi 1341974154 1071 QRETLKRQVEETEAQLR 1087
Cdd:COG3899 1228 LAALALAAALLALRLLA 1244
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
895-1191 |
1.60e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.52 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 895 SYLEALREATEKRlaadRERQKalavECERLDPHGETFALALRAREADEAQVEMALEALAERQAELAEREAELAPRLTDV 974
Cdd:TIGR02169 706 ELSQELSDASRKI----GEIEK----EIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKL 777
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 975 ALACIDDYQRYLQEGGEFAQQEAAEarleaetaLAELAPRCEAAVRELEAHGQTWLAAEQFSD----------------- 1037
Cdd:TIGR02169 778 EEALNDLEARLSHSRIPEIQAELSK--------LEEEVSRIEARLREIEQKLNRLTLEKEYLEkeiqelqeqridlkeqi 849
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1038 AGGVERLQALEARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSdgERDRLRALARFEAEGGVDFMVTAA 1117
Cdd:TIGR02169 850 KSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER--KIEELEAQIEKKRKRLSELKAKLE 927
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1118 EVQEELEAAQARATRradfDFTRIRAYLEVRDAAGGSQKLEREI--------------ARVRRELGELRETRKARGEERD 1183
Cdd:TIGR02169 928 ALEEELSEIEDPKGE----DEEIPEEELSLEDVQAELQRVEEEIralepvnmlaiqeyEEVLKRLDELKEKRAKLEEERK 1003
|
....*...
gi 1341974154 1184 ALEARLAE 1191
Cdd:TIGR02169 1004 AILERIEE 1011
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
897-1107 |
2.04e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 897 LEALRE---ATEKRLAADRERQKALAVECERLDPHGETFALALRAREADEAQVEMALEALAER----QAELAEREAELAP 969
Cdd:COG4942 29 LEQLQQeiaELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEiaelRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 970 RLTDVALACIDDYQRYLQEGGEFAQqeaaeaRLEAETALAELAPRCEAAVRELEAhgqtwlaaeqfsdaggveRLQALEA 1049
Cdd:COG4942 109 LLRALYRLGRQPPLALLLSPEDFLD------AVRRLQYLKYLAPARREQAEELRA------------------DLAELAA 164
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1050 RLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLRGIFSD--GERDRLRALARFEAE 1107
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKElaELAAELAELQQEAEE 224
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
884-1193 |
4.12e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.95 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 884 ETLAVKAALDPSYLEALREATEKRlaadRERQKALAVECERLDphgETFALALRAREADEAQVEMALEALAERQAELAER 963
Cdd:PRK02224 359 EELREEAAELESELEEAREAVEDR----REEIEELEEEIEELR---ERFGDAPVDLGNAEDFLEELREERDELREREAEL 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 964 EAELAPRLTDVALAciddyqRYLQEGGEFAQQEAAEARLEAETALAElaprCEAAVRELEAhgqtwlaaeQFSDAGgvER 1043
Cdd:PRK02224 432 EATLRTARERVEEA------EALLEAGKCPECGQPVEGSPHVETIEE----DRERVEELEA---------ELEDLE--EE 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1044 LQALEARLAELERhLSEASVRLAAAEEQRETLKRQVEETEAQLrgifsDGERDRLRALARFEAEGGVDFMVTAAEVQEEL 1123
Cdd:PRK02224 491 VEEVEERLERAED-LVEAEDRIERLEERREDLEELIAERRETI-----EEKRERAEELRERAAELEAEAEEKREAAAEAE 564
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1124 EAAQARATRRADFDfTRIRAYLEVRDAAGGSQKLEREIARVRRELGELRETRKARGEERDALEARLAEQR 1193
Cdd:PRK02224 565 EEAEEAREEVAELN-SKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKR 633
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1008-1213 |
5.88e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 5.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1008 LAELAPRCEAAVRELEAHGQTWLAAEQFSDAGgvERLQALEARLAELERHLSEASVRLAAAEEQRETLKRQVEETEAQLR 1087
Cdd:COG3206 180 LEEQLPELRKELEEAEAALEEFRQKNGLVDLS--EEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALP 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1341974154 1088 GIFSDGERDRLRAlarfeaeggvdfmvTAAEVQEELEAAQARATRradfDFTRIRAYLEVRDAAggSQKLEREIARVRRE 1167
Cdd:COG3206 258 ELLQSPVIQQLRA--------------QLAELEAELAELSARYTP----NHPDVIALRAQIAAL--RAQLQQEAQRILAS 317
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1341974154 1168 LGELRETRKARgeeRDALEARLAEQRRALACIDQLAVEWLRVLRDL 1213
Cdd:COG3206 318 LEAELEALQAR---EASLQAQLAQLEARLAELPELEAELRRLEREV 360
|
|
| |
