|
Name |
Accession |
Description |
Interval |
E-value |
| MurF |
COG0770 |
UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; ... |
2-457 |
0e+00 |
|
UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide synthase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440533 [Multi-domain] Cd Length: 451 Bit Score: 530.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 2 IDVSLEQICSVVSGELIKAGNSnnnVINAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVERKLDLNITQ 81
Cdd:COG0770 1 ILLTLAEIAEATGGRLIGDPDL---VVTGVSTDSRKIKPGDLFVALKGERFDGHDFVAQALAKGAAAALVSRPLPADLPL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 82 VVVEDTKLALGELSAWIHKQCDVPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNFNNDIGVPLTLLRSEPNDDYAVI 161
Cdd:COG0770 78 IVVDDTLKALQQLAAAHRARFNIPVIAITGSNGKTTTKEMLAAVLSTKGKVLATPGNFNNEIGVPLTLLRLPEDHEFAVL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 162 ELGANHIGEIAYTTQLVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKaVL 241
Cdd:COG0770 158 EMGMNHPGEIAYLARIARPDIAVITNIGPAHLEGFGSLEGIARAKGEIFEGLPPGGVAVLNADDPLLAALAERAKAR-VL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 242 TFSEGSrEADYFAENIEINDQGeACFDMQTPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGR 321
Cdd:COG0770 237 TFGLSE-DADVRAEDIELDEDG-TRFTLHTPGGELEVTLPLPGRHNVSNALAAAAVALALGLDLEEIAAGLAAFQPVKGR 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 322 VEVQQLSQNIKLIDDSYNASVPAMKAAAKLLSSFK--GQRWLILGNMAELGDESLALHRQVGEYAAPFAFEHVLTYGDDT 399
Cdd:COG0770 315 LEVIEGAGGVTLIDDSYNANPDSMKAALDVLAQLPggGRRIAVLGDMLELGEESEELHREVGELAAELGIDRLFTVGELA 394
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1345422655 400 KVISE---VCNGTHFATHQAMIAHIEQHLRlpenASHTLLVKGANSAGMSKIAAALKENFS 457
Cdd:COG0770 395 RAIAEaagGERAEHFEDKEELLAALKALLR----PGDVVLVKGSRGMGLERVVEALKEGAA 451
|
|
| murF |
PRK10773 |
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed |
1-457 |
0e+00 |
|
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Pssm-ID: 182718 [Multi-domain] Cd Length: 453 Bit Score: 523.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 1 MIDVSLEQICSVVSGELIKAgnsnNNVINAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVERKLDLNIT 80
Cdd:PRK10773 1 MISVTLSQLADILNGELQGA----DITIDAVTTDTRKVTPGCLFVALKGERFDAHDFADDAKAAGAGALLVSRPLDIDLP 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 81 QVVVEDTKLALGELSAWIHKQCDVPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNFNNDIGVPLTLLRSEPNDDYAV 160
Cdd:PRK10773 77 QLVVKDTRLAFGQLAAWVRQQVPARVVALTGSSGKTSVKEMTAAILRQCGNTLYTAGNLNNDIGVPLTLLRLTPEHDYAV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 161 IELGANHIGEIAYTTQLVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKAV 240
Cdd:PRK10773 157 IELGANHQGEIAYTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADSNDWLNWQSVIGSKTV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 241 LTFS-EGSREADYFAENIEINDQGEAcFDMQTPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVK 319
Cdd:PRK10773 237 WRFSpNAANSVDFTATNIHVTSHGTE-FTLHTPTGSVDVLLPLPGRHNIANALAAAALAMSVGATLDAVKAGLANLKAVP 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 320 GRVEVQQLSQNIKLIDDSYNASVPAMKAAAKLLSSFKGQRWLILGNMAELGDESLALHRQVGEYAAPFAFEHVLTYGDDT 399
Cdd:PRK10773 316 GRLFPIQLAEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSVGKLS 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1345422655 400 KVISEVC-NGTHFATHQAMIAHIEQhlRLPENASHTLLVKGANSAGMSKIAAALKENFS 457
Cdd:PRK10773 396 HAISEASgVGEHFADKTALIARLKA--LLAEHQVITILVKGSRSAAMEEVVRALQENGT 452
|
|
| murF |
TIGR01143 |
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; This family consists of the ... |
33-452 |
1.87e-167 |
|
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273468 [Multi-domain] Cd Length: 417 Bit Score: 477.53 E-value: 1.87e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 33 TDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVER--KLDLNITQVVVEDTKLALGELSAWIHKQCDVPTMAIT 110
Cdd:TIGR01143 1 TDSRAIKPGDLFIALKGERFDGHDFVEQALAAGAVAVVVDRevGPDNGLPQILVDDTLEALQALARAKRAKFSGKVIGIT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 111 GSCGKTTVKEMVASILQQRGKVLFTAGNFNNDIGVPLTLLRSEPNDDYAVIELGANHIGEIAYTTQLVKPQVALVNNVAA 190
Cdd:TIGR01143 81 GSSGKTTTKEMLAAILSHKYKVFATPGNFNNEIGLPLTLLRAPGDHDYAVLEMGASHPGEIAYLAEIAKPDIAVITNIGP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 191 AHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKAVLTFSEGSreADYFAENIEINDQGEACFDMQ 270
Cdd:TIGR01143 161 AHLEGFGSLEGIAEAKGEILQGLKENGIAVINADDPAFADLAKRLPNRNILSFGFEG--GDFVAKDISYSALGSTSFTLV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 271 TPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGRVEVqQLSQNIKLIDDSYNASVPAMKAAAK 350
Cdd:TIGR01143 239 APGGEFEVSLPLLGRHNVMNALAAAALALELGIPLEEIAEGLAELKLVKGRFEV-QTKNGLTLIDDTYNANPDSMRAALD 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 351 LLSSFKGQRWLILGNMAELGDESLALHRQVGEYAAPFAFEHVLTYGDDTKVISEV--CNGTHFATHQAMIAHIEQHLRlp 428
Cdd:TIGR01143 318 ALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLVGEEAAVIYDSfgKQGKHFADKDELLAFLKTLVR-- 395
|
410 420
....*....|....*....|....
gi 1345422655 429 enASHTLLVKGANSAGMSKIAAAL 452
Cdd:TIGR01143 396 --KGDVVLVKGSRSVKLEKVVEAL 417
|
|
| Mur_ligase_M |
pfam08245 |
Mur ligase middle domain; |
109-288 |
2.07e-44 |
|
Mur ligase middle domain;
Pssm-ID: 462409 [Multi-domain] Cd Length: 199 Bit Score: 154.00 E-value: 2.07e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 109 ITGSCGKTTVKEMVASILQQRGKVLFTAG--------NFNNDIGVPLTLLRSEPND-DYAVIELGANHIGEiAYTTQLVK 179
Cdd:pfam08245 1 VTGTNGKTTTTELIAAILSLAGGVIGTIGtyigksgnTTNNAIGLPLTLAEMVEAGaEYAVLEVSSHGLGE-GRLSGLLK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 180 PQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKA--VLTFSEGSrEADYFAENI 257
Cdd:pfam08245 80 PDIAVFTNISPDHLDFHGTMENYAKAKAELFEGLPEDGIAVINADDPYGAFLIAKLKKAGvrVITYGIEG-EADLRAANI 158
|
170 180 190
....*....|....*....|....*....|.
gi 1345422655 258 EINDQGEACFDMQTPQGATAVELGIIGQHNV 288
Cdd:pfam08245 159 ELSSDGTSFDLFTVPGGELEIEIPLLGRHNV 189
|
|
| F430_CfbE |
NF033197 |
coenzyme F430 synthase; Members of this family are coenzyme F430 synthase, involving in ... |
90-364 |
3.53e-04 |
|
coenzyme F430 synthase; Members of this family are coenzyme F430 synthase, involving in synthesizing coenzyme F430, which is used in methanogens by coenzyme M reductase. Members of this family are restricted to archaeal methanogens, and resemble (and may be misannotated as) MurD, an enzyme of bacterial cell wall biosynthesis.
Pssm-ID: 467992 [Multi-domain] Cd Length: 419 Bit Score: 42.70 E-value: 3.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 90 ALGELSAWIHKQCDVPTMAITGSCGKTTVKEMVASILQQRGKVLFT--------AGNFNNDIGV-PLTLLR--------S 152
Cdd:NF033197 78 AVGEILKKKYGRIPKKFIEITGVKGKTTTAELLAHILSDEYVLLHTsrgterypEGELSNKGSItPASILNalelaeeiG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 153 EPNDDYAVIE--LGANHIGEIAYTTQLvkpqvalvnnvaaahLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDF 230
Cdd:NF033197 158 IDDYGFLIFEvsLGGTGAGDVGIITNI---------------LEDYPIAGGKRSASAAKLQSLKNAKVGSINVADLGIYI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 231 WNEVLADKAVL---TFSEGSREADYFAENIEINDqgeacfdmqtpqgatavelGIIGQHNVANALAAAALSIQFGATLDE 307
Cdd:NF033197 223 NGKNKLVITVAgveILSKYPLRFKYGNTEFEFNP-------------------LLFGPHYRENSLFAIEAALNLGVDPED 283
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1345422655 308 IKSGLANLISVKGRVEVQQLsQNIKLIDDSyNA--SVPAMKAAAKLLSSFKGQRWLILG 364
Cdd:NF033197 284 IISALKGFKGLPGRMAVKKE-GGVVIVDNI-NPglNVKAIEYALDDALELLGDGTLVIG 340
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MurF |
COG0770 |
UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; ... |
2-457 |
0e+00 |
|
UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide synthase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440533 [Multi-domain] Cd Length: 451 Bit Score: 530.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 2 IDVSLEQICSVVSGELIKAGNSnnnVINAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVERKLDLNITQ 81
Cdd:COG0770 1 ILLTLAEIAEATGGRLIGDPDL---VVTGVSTDSRKIKPGDLFVALKGERFDGHDFVAQALAKGAAAALVSRPLPADLPL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 82 VVVEDTKLALGELSAWIHKQCDVPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNFNNDIGVPLTLLRSEPNDDYAVI 161
Cdd:COG0770 78 IVVDDTLKALQQLAAAHRARFNIPVIAITGSNGKTTTKEMLAAVLSTKGKVLATPGNFNNEIGVPLTLLRLPEDHEFAVL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 162 ELGANHIGEIAYTTQLVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKaVL 241
Cdd:COG0770 158 EMGMNHPGEIAYLARIARPDIAVITNIGPAHLEGFGSLEGIARAKGEIFEGLPPGGVAVLNADDPLLAALAERAKAR-VL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 242 TFSEGSrEADYFAENIEINDQGeACFDMQTPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGR 321
Cdd:COG0770 237 TFGLSE-DADVRAEDIELDEDG-TRFTLHTPGGELEVTLPLPGRHNVSNALAAAAVALALGLDLEEIAAGLAAFQPVKGR 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 322 VEVQQLSQNIKLIDDSYNASVPAMKAAAKLLSSFK--GQRWLILGNMAELGDESLALHRQVGEYAAPFAFEHVLTYGDDT 399
Cdd:COG0770 315 LEVIEGAGGVTLIDDSYNANPDSMKAALDVLAQLPggGRRIAVLGDMLELGEESEELHREVGELAAELGIDRLFTVGELA 394
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1345422655 400 KVISE---VCNGTHFATHQAMIAHIEQHLRlpenASHTLLVKGANSAGMSKIAAALKENFS 457
Cdd:COG0770 395 RAIAEaagGERAEHFEDKEELLAALKALLR----PGDVVLVKGSRGMGLERVVEALKEGAA 451
|
|
| murF |
PRK10773 |
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed |
1-457 |
0e+00 |
|
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Pssm-ID: 182718 [Multi-domain] Cd Length: 453 Bit Score: 523.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 1 MIDVSLEQICSVVSGELIKAgnsnNNVINAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVERKLDLNIT 80
Cdd:PRK10773 1 MISVTLSQLADILNGELQGA----DITIDAVTTDTRKVTPGCLFVALKGERFDAHDFADDAKAAGAGALLVSRPLDIDLP 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 81 QVVVEDTKLALGELSAWIHKQCDVPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNFNNDIGVPLTLLRSEPNDDYAV 160
Cdd:PRK10773 77 QLVVKDTRLAFGQLAAWVRQQVPARVVALTGSSGKTSVKEMTAAILRQCGNTLYTAGNLNNDIGVPLTLLRLTPEHDYAV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 161 IELGANHIGEIAYTTQLVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKAV 240
Cdd:PRK10773 157 IELGANHQGEIAYTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADSNDWLNWQSVIGSKTV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 241 LTFS-EGSREADYFAENIEINDQGEAcFDMQTPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVK 319
Cdd:PRK10773 237 WRFSpNAANSVDFTATNIHVTSHGTE-FTLHTPTGSVDVLLPLPGRHNIANALAAAALAMSVGATLDAVKAGLANLKAVP 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 320 GRVEVQQLSQNIKLIDDSYNASVPAMKAAAKLLSSFKGQRWLILGNMAELGDESLALHRQVGEYAAPFAFEHVLTYGDDT 399
Cdd:PRK10773 316 GRLFPIQLAEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSVGKLS 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1345422655 400 KVISEVC-NGTHFATHQAMIAHIEQhlRLPENASHTLLVKGANSAGMSKIAAALKENFS 457
Cdd:PRK10773 396 HAISEASgVGEHFADKTALIARLKA--LLAEHQVITILVKGSRSAAMEEVVRALQENGT 452
|
|
| murF |
TIGR01143 |
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; This family consists of the ... |
33-452 |
1.87e-167 |
|
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273468 [Multi-domain] Cd Length: 417 Bit Score: 477.53 E-value: 1.87e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 33 TDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVER--KLDLNITQVVVEDTKLALGELSAWIHKQCDVPTMAIT 110
Cdd:TIGR01143 1 TDSRAIKPGDLFIALKGERFDGHDFVEQALAAGAVAVVVDRevGPDNGLPQILVDDTLEALQALARAKRAKFSGKVIGIT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 111 GSCGKTTVKEMVASILQQRGKVLFTAGNFNNDIGVPLTLLRSEPNDDYAVIELGANHIGEIAYTTQLVKPQVALVNNVAA 190
Cdd:TIGR01143 81 GSSGKTTTKEMLAAILSHKYKVFATPGNFNNEIGLPLTLLRAPGDHDYAVLEMGASHPGEIAYLAEIAKPDIAVITNIGP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 191 AHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKAVLTFSEGSreADYFAENIEINDQGEACFDMQ 270
Cdd:TIGR01143 161 AHLEGFGSLEGIAEAKGEILQGLKENGIAVINADDPAFADLAKRLPNRNILSFGFEG--GDFVAKDISYSALGSTSFTLV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 271 TPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGRVEVqQLSQNIKLIDDSYNASVPAMKAAAK 350
Cdd:TIGR01143 239 APGGEFEVSLPLLGRHNVMNALAAAALALELGIPLEEIAEGLAELKLVKGRFEV-QTKNGLTLIDDTYNANPDSMRAALD 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 351 LLSSFKGQRWLILGNMAELGDESLALHRQVGEYAAPFAFEHVLTYGDDTKVISEV--CNGTHFATHQAMIAHIEQHLRlp 428
Cdd:TIGR01143 318 ALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLVGEEAAVIYDSfgKQGKHFADKDELLAFLKTLVR-- 395
|
410 420
....*....|....*....|....
gi 1345422655 429 enASHTLLVKGANSAGMSKIAAAL 452
Cdd:TIGR01143 396 --KGDVVLVKGSRSVKLEKVVEAL 417
|
|
| PRK11929 |
PRK11929 |
bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE ... |
5-453 |
4.10e-118 |
|
bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF;
Pssm-ID: 237025 [Multi-domain] Cd Length: 958 Bit Score: 367.88 E-value: 4.10e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 5 SLEQICSVVSGELIKAGNSNNNViNAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVERKL-DLNITQVV 83
Cdd:PRK11929 504 TLIKLRAAKGGSNSLQINSLPHA-GAVSTDSRSVGRGELFVALRGENFDGHDYLPQAFAAGACAAVVERQVaDVDLPQIV 582
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 84 VEDTKLALGELSAWIHKQCDVPTMAITGSCGKTTVKEMVASIL---QQRGKVLFTAGNFNNDIGVPLTLLRSEPNDDYAV 160
Cdd:PRK11929 583 VDDTRAALGRLATAWRARFSLPVVAITGSNGKTTTKEMIAAILaawQGEDRVLATEGNFNNEIGVPLTLLRLRAQHRAAV 662
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 161 IELGANHIGEIAYTTQLVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKAV 240
Cdd:PRK11929 663 FELGMNHPGEIAYLAAIAAPTVALVTNAQREHQEFMHSVEAVARAKGEIIAALPEDGVAVVNGDDPYTAIWAKLAGARRV 742
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 241 LTF--SEGSR-EADYFAENIEINDQGEACFDMQTPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLIS 317
Cdd:PRK11929 743 LRFglQPGADvYAEKIAKDISVGEAGGTRCQVVTPAGSAEVYLPLIGEHNLRNALAAIACALAAGASLKQIRAGLERFQP 822
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 318 VKGRVEVQQLSQNIKLIDDSYNASVPAMKAAAKLLSSFK-GQRWLILGNMAELGDESLALHRQVGEYAAPFAFEHVLTYG 396
Cdd:PRK11929 823 VAGRMQRRRLSCGTRIIDDTYNANPDSMRAAIDVLAELPnGPRALVLGDMLELGDNGPAMHREVGKYARQLGIDALITLG 902
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1345422655 397 DDT----KVISEVCNGtHFATHQAMIAHIEQHLrlpeNASHTLLVKGANSAGMSKIAAALK 453
Cdd:PRK11929 903 EAArdaaAAFGAGARG-VCASVDEIIAALRGAL----PEGDSVLIKGSRFMRLERVVDALS 958
|
|
| PRK14093 |
PRK14093 |
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; ... |
28-457 |
2.24e-53 |
|
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional
Pssm-ID: 184501 [Multi-domain] Cd Length: 479 Bit Score: 185.75 E-value: 2.24e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 28 INAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVER----KLDLNITQVVVEDTKLALGELSAWIHKQCD 103
Cdd:PRK14093 28 VTGISIDSRTLAPGDAYFAIKGDVHDGHAFVAAALKAGAALAVVERaqrdKFAADAPLLVVDDVLAALRDLGRAARARLE 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 104 VPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNFNNDIGVPLTLLRSEPNDDYAVIELGANHIGEIAYTTQLVKPQVA 183
Cdd:PRK14093 108 AKVIAVTGSVGKTSTKEALRGVLGAQGETHASVASFNNHWGVPLSLARCPADARFAVFEIGMNHAGEIEPLVKMVRPHVA 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 184 LVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESngGDFwnEVLADKA-------VLTFSEGSReADYFAEN 256
Cdd:PRK14093 188 IITTVEPVHLEFFSGIEAIADAKAEIFTGLEPGGAAVLNRDN--PQF--DRLAASAraagiarIVSFGADEK-ADARLLD 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 257 IEINDQGEACFDMQTPQGATaVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGRVEVQQL---SQNIKL 333
Cdd:PRK14093 263 VALHADCSAVHADILGHDVT-YKLGMPGRHIAMNSLAVLAAAELAGADLALAALALSQVQPAAGRGVRHTLevgGGEATL 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 334 IDDSYNASVPAMKAAAKLLSSF----KGQRWLILGNMAELGDESLALHRQVGEYAAPFAFEHVLTYGDDTKVISEVCNGT 409
Cdd:PRK14093 342 IDESYNANPASMAAALGVLGRApvgpQGRRIAVLGDMLELGPRGPELHRGLAEAIRANAIDLVFCCGPLMRNLWDALSSG 421
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1345422655 410 HFATHQAMIAHIEQHLRLPENASHTLLVKGANSAGMSKIAAALKENFS 457
Cdd:PRK14093 422 KRGGYAEDAAALESQVVAAIRAGDVIMVKGSLGSRMKTIVTALEKRFP 469
|
|
| Mur_ligase_M |
pfam08245 |
Mur ligase middle domain; |
109-288 |
2.07e-44 |
|
Mur ligase middle domain;
Pssm-ID: 462409 [Multi-domain] Cd Length: 199 Bit Score: 154.00 E-value: 2.07e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 109 ITGSCGKTTVKEMVASILQQRGKVLFTAG--------NFNNDIGVPLTLLRSEPND-DYAVIELGANHIGEiAYTTQLVK 179
Cdd:pfam08245 1 VTGTNGKTTTTELIAAILSLAGGVIGTIGtyigksgnTTNNAIGLPLTLAEMVEAGaEYAVLEVSSHGLGE-GRLSGLLK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 180 PQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKA--VLTFSEGSrEADYFAENI 257
Cdd:pfam08245 80 PDIAVFTNISPDHLDFHGTMENYAKAKAELFEGLPEDGIAVINADDPYGAFLIAKLKKAGvrVITYGIEG-EADLRAANI 158
|
170 180 190
....*....|....*....|....*....|.
gi 1345422655 258 EINDQGEACFDMQTPQGATAVELGIIGQHNV 288
Cdd:pfam08245 159 ELSSDGTSFDLFTVPGGELEIEIPLLGRHNV 189
|
|
| PRK11930 |
PRK11930 |
putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine ... |
2-448 |
3.17e-44 |
|
putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional
Pssm-ID: 237026 [Multi-domain] Cd Length: 822 Bit Score: 165.52 E-value: 3.17e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 2 IDVSLEQICSVVSGELIKAGNSNnnvINAVSTDTRTVE--EGALFVAIVGERFDAHDFCHQAVEANASALLV-ERKLDLN 78
Cdd:PRK11930 1 MSYTLESISGILGAEGLGDKDAI---IDQILTDSRSLSfpENTLFFALKGERNDGHRYIQELYEKGVRNFVVsEEKHPEE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 79 ITQ----VVVEDTKLALGELSAWIHKQCDVPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNFNNDIGVPLTLLRSEP 154
Cdd:PRK11930 78 SYPdanfLKVKDPLKALQELAAYHRSQFDIPVIGITGSNGKTIVKEWLYQLLSPDYNIVRSPRSYNSQIGVPLSVWQLNE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 155 NDDYAVIELGANHIGEIAYTTQLVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFqglAAGDTAIVNLESNGGD-FWNE 233
Cdd:PRK11930 158 EHELGIFEAGISQPGEMEALQKIIKPTIGILTNIGGAHQENFRSIKQKIMEKLKLF---KDCDVIIYNGDNELISsCITK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 234 VLADKAVLTFSEGSREADYFAENIEiNDQGEACFDMQTPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLA 313
Cdd:PRK11930 235 SNLTLKLISWSRKDPEAPLYIPFVE-KKEDHTVISYTYKGEDFHFEIPFIDDASIENLIHCIAVLLYLGYSADQIQERMA 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 314 NLISVKGRVEVQQLSQNIKLIDDSYNASVPAMKAAAKLLSSFK--GQRWLILGNMAELGDESLALHRQVGEYAAPFAFEH 391
Cdd:PRK11930 314 RLEPVAMRLEVKEGINNCTLINDSYNSDLQSLDIALDFLNRRSqsKKKTLILSDILQSGQSPEELYRKVAQLISKRGIDR 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 392 VLTYGDDTKVISEVCNGT---HFATHQAMIAHIEQHLRLPEnashTLLVKGANSAGMSKI 448
Cdd:PRK11930 394 LIGIGEEISSEASKFEGTekeFFKTTEAFLKSFAFLKFRNE----LILVKGARKFEFEQI 449
|
|
| MurE |
COG0769 |
UDP-N-acetylmuramyl tripeptide synthase [Cell wall/membrane/envelope biogenesis]; ... |
31-336 |
1.18e-43 |
|
UDP-N-acetylmuramyl tripeptide synthase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl tripeptide synthase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440532 [Multi-domain] Cd Length: 459 Bit Score: 159.09 E-value: 1.18e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 31 VSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVERKLDL---NITQVVVEDTKLALGELSAWIHKQCDVP-- 105
Cdd:COG0769 2 ITYDSRKVKPGDLFVALPGARVDGHDFIAQAIARGAVAVVTEAPGALlaaGVPVIVVPDPRAALALLAAAFYGHPSQKlk 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 106 TMAITGSCGKTTVKEMVASILQQRGK---VLFTAGNFNNDIGVP--LT---------LLRS--EPNDDYAVIE-----LG 164
Cdd:COG0769 82 LIGVTGTNGKTTTTYLLAQILRALGKktgLIGTVGNGIGGELIPssLTtpealdlqrLLAEmvDAGVTHVVMEvsshaLD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 165 ANHIGEIAYttqlvkpQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKaVLTFS 244
Cdd:COG0769 162 QGRVDGVRF-------DVAVFTNLTRDHLDYHGTMEAYFAAKARLFDQLGPGGAAVINADDPYGRRLAAAAPAR-VITYG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 245 EgSREADYFAENIEINDQGeACFDMQTPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGRVEV 324
Cdd:COG0769 234 L-KADADLRATDIELSADG-TRFTLVTPGGEVEVRLPLIGRFNVYNALAAIAAALALGIDLEEILAALEKLKGVPGRMER 311
|
330
....*....|..
gi 1345422655 325 QQLSQNIKLIDD 336
Cdd:COG0769 312 VDGGQGPTVIVD 323
|
|
| murE |
TIGR01085 |
UDP-N-acetylmuramyl-tripeptide synthetase; Most members of this family are EC 6.3.2.13, ... |
25-364 |
9.56e-38 |
|
UDP-N-acetylmuramyl-tripeptide synthetase; Most members of this family are EC 6.3.2.13, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase. An exception is Staphylococcus aureus, in which diaminopimelate is replaced by lysine in the peptidoglycan and MurE is EC 6.3.2.7. The Mycobacteria, part of the closest neighboring branch outside of the low-GC Gram-positive bacteria, use diaminopimelate. A close homolog, scoring just below the trusted cutoff, is found (with introns) in Arabidopsis thaliana. Its role is unknown. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273435 [Multi-domain] Cd Length: 464 Bit Score: 143.23 E-value: 9.56e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 25 NNVINAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVERKLDL---NITQVVVEDTKLALGELSAWI--H 99
Cdd:TIGR01085 1 DLEVTGLTLDSREVKPGDLFVAIKGTHVDGHDFIHDAIANGAVAVVVERDVDFyvaPVPVIIVPDLRHALSSLAAAFygH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 100 KQCDVPTMAITGSCGKTTVKEMVASILQQRGK---VLFTAGN--FNNDI---------GVPLTLLRS-----EPNDDYAV 160
Cdd:TIGR01085 81 PSKKLKVIGVTGTNGKTTTTSLIAQLLRLLGKktgLIGTIGYrlGGNDLiknpaalttPEALTLQSTlaemvEAGAQYAV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 161 IElgANHIGEIAYTTQLVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKAv 240
Cdd:TIGR01085 161 ME--VSSHALAQGRVRGVRFDAAVFTNLSRDHLDFHGTMENYFAAKASLFTELGLKRFAVINLDDEYGAQFVKRLPKDI- 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 241 lTFSEGSREADYFAENIEINDQGEAC----FDMQTPQGATAVELGIIGQHNVANALAAAALSIQFG-ATLDEIKSGLANL 315
Cdd:TIGR01085 238 -TVSAITQPADGRAQDIKITDSGYSFegqqFTFETPAGEGHLHTPLIGRFNVYNLLAALATLLHLGgIDLEDIVAALEKF 316
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1345422655 316 ISVKGRVEVQQLSQNIKLIDDsYNASVPAMKAAAKLLSSFKGQR-WLILG 364
Cdd:TIGR01085 317 RGVPGRMELVDGGQKFLVIVD-YAHTPDALEKALRTLRKHKDGRlIVVFG 365
|
|
| murE |
PRK00139 |
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional |
27-364 |
1.50e-27 |
|
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional
Pssm-ID: 234660 [Multi-domain] Cd Length: 460 Bit Score: 114.46 E-value: 1.50e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 27 VINAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVER--KLDLNITQVVVEDTKLALGELSAWI--HKQC 102
Cdd:PRK00139 14 EITGLTYDSRKVKPGDLFVALPGHKVDGRDFIAQAIANGAAAVVAEAdgEAGTGVPVIIVPDLRKALALLAAAFygHPSD 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 103 DVPTMAITGSCGKTTVKEMVASILQQRGK---VLFTAGNFNNDIGVPLTLLRSEPND-------------DYAVIElgAN 166
Cdd:PRK00139 94 KLKLIGVTGTNGKTTTAYLLAQILRLLGEktaLIGTLGNGIGGELIPSGLTTPDALDlqrllaelvdagvTYAAME--VS 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 167 HIGeiayttqLVKPQVALVNNVAAA-------HLEGFGSIDGVKQAKGEIFQGLaaGDTAIVNLESNGGDFWNEvladkA 239
Cdd:PRK00139 172 SHA-------LDQGRVDGLKFDVAVftnlsrdHLDYHGTMEDYLAAKARLFSEL--GLAAVINADDEVGRRLLA-----L 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 240 VLTFSEGSREADYFAENIEINDQGeacfdmQTPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVK 319
Cdd:PRK00139 238 PDAYAVSMAGADLRATDVEYTDSG------QTFTLVTEVESPLIGRFNVSNLLAALAALLALGVPLEDALAALAKLQGVP 311
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1345422655 320 GRVEVQQLSQNIKLIDDsYnASVPAmkAAAKLLSSFK----GQRWLILG 364
Cdd:PRK00139 312 GRMERVDAGQGPLVIVD-Y-AHTPD--ALEKVLEALRphakGRLICVFG 356
|
|
| MurD |
COG0771 |
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; ... |
93-416 |
2.81e-26 |
|
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramoylalanine-D-glutamate ligase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440534 [Multi-domain] Cd Length: 445 Bit Score: 110.56 E-value: 2.81e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 93 ELSAWIhkqCDVPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNfnndIGVP-LTLLRSEPNDDYAVIELGAnhigei 171
Cdd:COG0771 97 ELAYRL---SPAPIIAITGTNGKTTTTTLIGHILKAAGLRVAVGGN----IGTPlLDLLLEPEPPDVYVLELSS------ 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 172 aY---TTQLVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLEsnggDFWNEVLADKA---VLTFSE 245
Cdd:COG0771 164 -FqleTTPSLRPDVAVILNITPDHLDRHGSMEAYAAAKARIFANQTPDDYAVLNAD----DPLTRALAEEAkarVVPFSL 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 246 GS-READYFAENIEINDQGEACFDMqtpqgaTAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGRVE- 323
Cdd:COG0771 239 KEpLEGGAGLEDGKLVDRASGEELL------PVDDLRLPGRHNLENALAALAAARALGVPPEAIREALRSFKGLPHRLEf 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 324 VQQLsQNIKLIDDSYNASVPAMKAAaklLSSFKGQRWLILGNMA-ELGDESLAlhRQVGEYAApfafeHVLTYGDDTKVI 402
Cdd:COG0771 313 VAEI-NGVRFINDSKATNPDATLAA---LESFDGPVVLIAGGLDkGADFSPLA--PAVAERVK-----AVVLIGEDAEKI 381
|
330
....*....|....
gi 1345422655 403 SEVCNGTHFATHQA 416
Cdd:COG0771 382 AAALAGAGVPVVIV 395
|
|
| murD |
TIGR01087 |
UDP-N-acetylmuramoylalanine--D-glutamate ligase; [Cell envelope, Biosynthesis and degradation ... |
103-402 |
1.98e-23 |
|
UDP-N-acetylmuramoylalanine--D-glutamate ligase; [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273436 [Multi-domain] Cd Length: 433 Bit Score: 102.03 E-value: 1.98e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 103 DVPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNfnndIGVPLTLLRSEPNDDYAVIELGANHIgeiaYTTQLVKPQV 182
Cdd:TIGR01087 101 PLPVVAITGTNGKTTTTSLLYHLLKAAGLKAFLGGN----IGTPALEVLDQEGAELYVLELSSFQL----ETTESLRPEI 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 183 ALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKAVLTFSEGsreadYFAENIEINDQ 262
Cdd:TIGR01087 173 ALILNISEDHLDWHGSFEDYVAAKLKIFARQTEGDVAVLNADDPRFARLAQKSKAQVIWFSVEK-----DAERGLCIRDG 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 263 GEACFDmqtpqgaTAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGRVEVQQLSQNIKLIDDSYNASV 342
Cdd:TIGR01087 248 GLYLKP-------NDLEGSLLGLHNAENILAAIALAKSLGLNLEAILEALRSFKGLPHRLEYVGQKNGVHFYNDSKATNV 320
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1345422655 343 PAMKAAaklLSSFKGQRWLILGNMA-ELGDESLAlhrqvgEYAAPFAfEHVLTYGDDTKVI 402
Cdd:TIGR01087 321 HATLAA---LSAFDNPVILIVGGDDkGADFSPLA------PAAAGKV-KAVLAIGEDAAKI 371
|
|
| PRK11929 |
PRK11929 |
bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE ... |
28-324 |
5.57e-21 |
|
bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF;
Pssm-ID: 237025 [Multi-domain] Cd Length: 958 Bit Score: 96.31 E-value: 5.57e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 28 INAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVERK-----LDLNITQVVVEDTKLALGELSA--WIHK 100
Cdd:PRK11929 29 TADLRLDSREVQPGDLFVACRGAASDGRAFIDQALARGAAAVLVEAEgedqvAAADALVLPVADLRKALGELAArwYGRP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 101 QCDVPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNFNN-----DIGVPLT---------LLRS--EPNDDYAVIElg 164
Cdd:PRK11929 109 SEQLSLVAVTGTNGKTSCAQLLAQLLTRLGKPCGSIGTLGArldgrLIPGSLTtpdaiilhrILARmrAAGADAVAME-- 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 165 ANHIGEIAYTTQLVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKAVLTFS 244
Cdd:PRK11929 187 ASSHGLEQGRLDGLRIAVAGFTNLTRDHLDYHGTMQDYEEAKAALFSKLPGLGAAVINADDPAAARLLAALPRGLKVGYS 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 245 EGSREADYFAENIEINDQGEAcFDMQTPQGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGRVEV 324
Cdd:PRK11929 267 PQNAGADVQARDLRATAHGQV-FTLATPDGSYQLVTRLLGRFNVSNLLLVAAALKKLGLPLAQIARALAAVSPVPGRMER 345
|
|
| PRK14022 |
PRK14022 |
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase; |
15-373 |
1.06e-17 |
|
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;
Pssm-ID: 237588 [Multi-domain] Cd Length: 481 Bit Score: 85.09 E-value: 1.06e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 15 GELIKAG----NSNNNVINAVSTDTRTVEEGALFVAiVGERFdAHDFCHQAVEANASALLVERKLDLNITQVVVEDTKLA 90
Cdd:PRK14022 17 REIIDQDhyhyNYSGVQFDDISYDSRTADEGTLFFA-KGAYF-KHKFLQNAITQGLKLYVSEKDYEVGIPQVIVPDIKKA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 91 LGELSA--WIHKQCDVPTMAITGSCGKTTVKEMVASILQQRGK---VLFTAGNFNNDIGVPLTLLRSEPNDDYAVI---- 161
Cdd:PRK14022 95 MSLIAMefYDNPQHKLKLLAFTGTKGKTTAAYFAYHILKQLHKpamLSTMNTTLDGETFFKSALTTPESLDLFKMMaeav 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 162 ELGANH-IGEI---AYTTQLVKP---QVALVNNVAAAHLeGF---GSIDGVKQAKGEIFQGLAAgdtAIVNlesNGGDFW 231
Cdd:PRK14022 175 DNGMTHlIMEVssqAYLVGRVYGltfDVGVFLNITPDHI-GPiehPTFEDYFYHKRLLMENSKA---VVVN---SDMDHF 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 232 NEVLADKAvltfsegSREADYFAENIEINDQGEACFDMQT---PQGATAVELgiIGQHNVANALAAAALSIQFGATLDEI 308
Cdd:PRK14022 248 SELLEQVT-------PQEHDFYGIDSENQIMASNAFSFEAtgkLAGTYDIQL--IGKFNQENAMAAGLACLRLGASLEDI 318
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1345422655 309 KSGLANlISVKGRVEVQQLSQNIKLIDDsYNASVPAMKaaaKLLSSF----KGQRWLILGnMAELGDES 373
Cdd:PRK14022 319 QKGIAQ-TPVPGRMEVLTQSNGAKVFID-YAHNGDSLN---KLIDVVeehqKGKLILLLG-AAGNKGES 381
|
|
| MurC |
COG0773 |
UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family [Cell wall ... |
90-336 |
1.03e-16 |
|
UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440536 [Multi-domain] Cd Length: 451 Bit Score: 82.04 E-value: 1.03e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 90 ALGELSAwiHKQCdvptMAITGSCGKTTVKEMVASILQQrGKVLFTA---GNFNNdIGVPLTLlrsePNDDYAVIElgan 166
Cdd:COG0773 96 MLAELMR--GKRS----IAVAGTHGKTTTTSMLAHILEE-AGLDPTFligGILNN-FGTNARL----GDGDYFVAE---- 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 167 higeiA--YTTQLVK--PQVALVNNVAAAHLEGFGSIDGVKQAkgeiFQGLAA----GDTAIVNLESNGGDfwnEVLA-- 236
Cdd:COG0773 160 -----AdeSDGSFLHysPDIAVVTNIEADHLDIYGDLEAIKEA----FHEFARnvpfYGLLVLCADDPGLR---ELLPrc 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 237 DKAVLTFSEgSREADYFAENIEINDQGeACFDMQTPQGATA-VELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANL 315
Cdd:COG0773 228 GRPVITYGF-SEDADYRAENIRIDGGG-STFDVLRRGEELGeVELNLPGRHNVLNALAAIAVALELGVDPEAIAEALASF 305
|
250 260
....*....|....*....|.
gi 1345422655 316 ISVKGRVEVQQLSQNIKLIDD 336
Cdd:COG0773 306 KGVKRRFELKGEVGGVTVIDD 326
|
|
| murD |
PRK14106 |
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional |
93-364 |
8.31e-15 |
|
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Pssm-ID: 184511 [Multi-domain] Cd Length: 450 Bit Score: 76.16 E-value: 8.31e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 93 ELSAWIHKQcdvPTMAITGSCGKTTVKEMVASILQQRGKVLFTAGNfnndIGVPL--TLLRSEPnDDYAVIELGANHIGE 170
Cdd:PRK14106 100 ELAYRFSKA---PIVAITGTNGKTTTTTLLGEIFKNAGRKTLVAGN----IGYPLidAVEEYGE-DDIIVAEVSSFQLET 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 171 IAYttqlVKPQVALVNNVAAAHLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLEsnggDFWNEVLADKA---VLTFSEGS 247
Cdd:PRK14106 172 IKE----FKPKVGCILNITPDHLDRHKTMENYIKAKARIFENQRPSDYTVLNYD----DPRTRSLAKKAkarVIFFSRKS 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 248 R-EADYFAENIEINdqgeacfdMQTPQGATAV----ELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGRV 322
Cdd:PRK14106 244 LlEEGVFVKNGKIV--------ISLGGKEEEVididEIFIPGEHNLENALAATAAAYLLGISPDVIANTLKTFKGVEHRI 315
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1345422655 323 EVQQLSQNIKLIDDSyNASVPamKAAAKLLSSFKGQRWLILG 364
Cdd:PRK14106 316 EFVAEINGVKFINDS-KGTNP--DAAIKALEAYETPIVLIAG 354
|
|
| murC |
TIGR01082 |
UDP-N-acetylmuramate--L-alanine ligase; This model describes the MurC protein in bacterial ... |
90-336 |
3.51e-13 |
|
UDP-N-acetylmuramate--L-alanine ligase; This model describes the MurC protein in bacterial peptidoglycan (murein) biosynthesis. In a few species (Mycobacterium leprae, the Chlamydia), the amino acid may be L-serine or glycine instead of L-alanine. A related protein, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by model TIGR01081. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273433 [Multi-domain] Cd Length: 448 Bit Score: 71.18 E-value: 3.51e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 90 ALGELSawihkqCDVPTMAITGSCGKTTVKEMVASILQQRGKV-------LFTAGNFNNDIGvpltllrsepNDDYAVIE 162
Cdd:TIGR01082 91 MLAELM------RFRHSIAVAGTHGKTTTTAMIAVILKEAGLDptvvvggLVKEAGTNARLG----------SGEYLVAE 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 163 LGANHIGEIAYTtqlvkPQVALVNNVAAAHLEGFG-SIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDfwneVLADKA-- 239
Cdd:TIGR01082 155 ADESDASFLHLQ-----PNVAIVTNIEPDHLDTYGsSFERLKAAFEKFIHNLPFYGLAVICADDPVLR----ELVPKAte 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 240 VLTFSEGSRE-ADYFAENIEINDqGEACFDMQTP-QGATAVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLIS 317
Cdd:TIGR01082 226 QVITYGGSGEdADYRAENIQQSG-AEGKFSVRGKgKLYLEFTLNLPGRHNVLNALAAIAVALELGIDFEAILRALANFQG 304
|
250
....*....|....*....
gi 1345422655 318 VKGRVEVQQLSQNIKLIDD 336
Cdd:TIGR01082 305 VKRRFEILGEFGGVLLIDD 323
|
|
| Mur_ligase_C |
pfam02875 |
Mur ligase family, glutamate ligase domain; This family contains a number of related ligase ... |
318-394 |
2.49e-09 |
|
Mur ligase family, glutamate ligase domain; This family contains a number of related ligase enzymes which have EC numbers 6.3.2.*. This family includes: MurC, MurD, MurE, MurF, Mpl and FolC. MurC, MurD, Mure and MurF catalyze consecutive steps in the synthesis of peptidoglycan. Peptidoglycan consists of a sheet of two sugar derivatives, with one of these N-acetylmuramic acid attaching to a small pentapeptide. The pentapeptide is is made of L-alanine, D-glutamic acid, Meso-diaminopimelic acid and D-alanyl alanine. The peptide moiety is synthesized by successively adding these amino acids to UDP-N-acetylmuramic acid. MurC transfers the L-alanine, MurD transfers the D-glutamate, MurE transfers the diaminopimelic acid, and MurF transfers the D-alanyl alanine. This family also includes Folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate.
Pssm-ID: 460731 [Multi-domain] Cd Length: 87 Bit Score: 53.89 E-value: 2.49e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1345422655 318 VKGRVEVQQLSQNIKLIDDsYNASVPAMKAAAKLL-SSFKGQRWLILGNMaelGDESLALHRQVGEYAAPFAFEHVLT 394
Cdd:pfam02875 1 VPGRLEVVGENNGVLVIDD-YAHNPDAMEAALRALrNLFPGRLILVFGGM---GDRDAEFHALLGRLAAALADVVILT 74
|
|
| Mur_ligase |
pfam01225 |
Mur ligase family, catalytic domain; This family contains a number of related ligase enzymes ... |
28-96 |
1.62e-08 |
|
Mur ligase family, catalytic domain; This family contains a number of related ligase enzymes which have EC numbers 6.3.2.*. This family includes: MurC, MurD, MurE, MurF, Mpl and FolC. MurC, MurD, Mure and MurF catalyze consecutive steps in the synthesis of peptidoglycan. Peptidoglycan consists of a sheet of two sugar derivatives, with one of these N-acetylmuramic acid attaching to a small pentapeptide. The pentapeptide is is made of L-alanine, D-glutamic acid, Meso-diaminopimelic acid and D-alanyl alanine. The peptide moiety is synthesized by successively adding these amino acids to UDP-N-acetylmuramic acid. MurC transfers the L-alanine, MurD transfers the D-glutamate, MurE transfers the diaminopimelic acid, and MurF transfers the D-alanyl alanine. This family also includes Folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate.
Pssm-ID: 460121 [Multi-domain] Cd Length: 84 Bit Score: 51.47 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 28 INAVSTDTRTVEEGALFVAIVGERFDAHDFCHQAVEANASALLVERKlDLNITQ------------VVVEDTKLALGELS 95
Cdd:pfam01225 2 IHFVGIDGRGMSPGALFLALKGYRVDGSDFIESLIALGAAAVVGHDA-ANNISPdnpeleaakvpgIPVIDRREALAELA 80
|
.
gi 1345422655 96 A 96
Cdd:pfam01225 81 A 81
|
|
| F430_CfbE |
NF033197 |
coenzyme F430 synthase; Members of this family are coenzyme F430 synthase, involving in ... |
90-364 |
3.53e-04 |
|
coenzyme F430 synthase; Members of this family are coenzyme F430 synthase, involving in synthesizing coenzyme F430, which is used in methanogens by coenzyme M reductase. Members of this family are restricted to archaeal methanogens, and resemble (and may be misannotated as) MurD, an enzyme of bacterial cell wall biosynthesis.
Pssm-ID: 467992 [Multi-domain] Cd Length: 419 Bit Score: 42.70 E-value: 3.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 90 ALGELSAWIHKQCDVPTMAITGSCGKTTVKEMVASILQQRGKVLFT--------AGNFNNDIGV-PLTLLR--------S 152
Cdd:NF033197 78 AVGEILKKKYGRIPKKFIEITGVKGKTTTAELLAHILSDEYVLLHTsrgterypEGELSNKGSItPASILNalelaeeiG 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 153 EPNDDYAVIE--LGANHIGEIAYTTQLvkpqvalvnnvaaahLEGFGSIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDF 230
Cdd:NF033197 158 IDDYGFLIFEvsLGGTGAGDVGIITNI---------------LEDYPIAGGKRSASAAKLQSLKNAKVGSINVADLGIYI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 231 WNEVLADKAVL---TFSEGSREADYFAENIEINDqgeacfdmqtpqgatavelGIIGQHNVANALAAAALSIQFGATLDE 307
Cdd:NF033197 223 NGKNKLVITVAgveILSKYPLRFKYGNTEFEFNP-------------------LLFGPHYRENSLFAIEAALNLGVDPED 283
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1345422655 308 IKSGLANLISVKGRVEVQQLsQNIKLIDDSyNA--SVPAMKAAAKLLSSFKGQRWLILG 364
Cdd:NF033197 284 IISALKGFKGLPGRMAVKKE-GGVVIVDNI-NPglNVKAIEYALDDALELLGDGTLVIG 340
|
|
| PRK14573 |
PRK14573 |
bifunctional UDP-N-acetylmuramate--L-alanine ligase/D-alanine--D-alanine ligase; |
109-336 |
1.26e-03 |
|
bifunctional UDP-N-acetylmuramate--L-alanine ligase/D-alanine--D-alanine ligase;
Pssm-ID: 184752 [Multi-domain] Cd Length: 809 Bit Score: 41.34 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 109 ITGSCGKTTVKEMVASILQQRGKV-LFTAGNFNNdigvpLTLLRSEPNDDYAVIELGANHiGEIAYTTqlvkPQVALVNN 187
Cdd:PRK14573 109 VSGSHGKTTVSSLITAIFQEAKKDpSYAIGGLNQ-----EGLNGYSGSSEYFVAEADESD-GSLKHYT----PEFSVITN 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 188 VAAAHLEGFG--------SIDGVKQAKGEIFQGLAAGDTAIVNLESNGGDFWNEVLADKAVLTFS-EGSREadYFAenie 258
Cdd:PRK14573 179 IDNEHLSNFEgdrelllaSIQDFARKVQQINKCFYNGDCPRLKGCLQGHSYGFSSSCDLHILSYYqEGWRS--YFS---- 252
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1345422655 259 INDQGEACFDmqtpqgataVELGIIGQHNVANALAAAALSIQFGATLDEIKSGLANLISVKGRVEVQQLSQNIKLIDD 336
Cdd:PRK14573 253 AKFLGVVYQD---------IELNLVGMHNVANAAAAMGIALTLGIDEGAIRNALKGFSGVQRRLERKNSSETFLFLED 321
|
|
| PRK14016 |
PRK14016 |
cyanophycin synthetase; Provisional |
104-204 |
3.67e-03 |
|
cyanophycin synthetase; Provisional
Pssm-ID: 237586 [Multi-domain] Cd Length: 727 Bit Score: 39.75 E-value: 3.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345422655 104 VPTMAITGSCGKTTVKEMVASILQQRGKVlftAGNFNNDiGVPL-----------------TLLRsEPNDDYAVIELGAN 166
Cdd:PRK14016 480 IPIVAVTGTNGKTTTTRLIAHILKLSGKR---VGMTTTD-GVYIdgrlidkgdctgpksarRVLM-NPDVEAAVLETARG 554
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1345422655 167 HI---GeIAYTtqlvKPQVALVNNVAAAHLeGFGSIDGVKQ 204
Cdd:PRK14016 555 GIlreG-LAYD----RCDVGVVTNIGEDHL-GLGGINTLED 589
|
|
| |
