|
Name |
Accession |
Description |
Interval |
E-value |
| malG |
PRK10998 |
maltose ABC transporter permease MalG; |
1-296 |
0e+00 |
|
maltose ABC transporter permease MalG;
Pssm-ID: 182891 Cd Length: 296 Bit Score: 504.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 1 MAMVQPRSTRYRVLVSHLGMLAFIAIILFPLLMVISISFRSGNFASGSLLPENPSLEHWYLALGIPYTDEAGVTTQPPFP 80
Cdd:PRK10998 1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 81 VLLWLWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGNHVSWLGLNTHG 160
Cdd:PRK10998 81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 161 AVIVASLGGMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLVDT 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1371832456 241 DKLTLAVGAQQYLYEQNYLWGDFAAAAVLSGLPITVIFLYCQKWIVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
3-296 |
1.03e-115 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 334.43 E-value: 1.03e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 3 MVQPRSTRYRVLVSHLGMLAFIAIILFPLLMVISISFRSGNF-ASGSLLPENPSLEHWYLALGipytdeagvttqpPFPV 81
Cdd:COG3833 5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 82 LLWLWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGnhvswlGLNTHGA 161
Cdd:COG3833 72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALG------LLNTLLG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 162 VIVASLGG-MALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLVDT 240
Cdd:COG3833 146 LILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1371832456 241 DKLTLAVGAQQYLYEQ-NYLWGDFAAAAVLSGLPITVIFLYCQKWIVGGLTAGGVKG 296
Cdd:COG3833 226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
85-274 |
1.24e-18 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 81.56 E-value: 1.24e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 85 LWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGNHVSWLGLnTHGAVIV 164
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 165 ASLGGMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLVDTDKLT 244
Cdd:cd06261 80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159
|
170 180 190
....*....|....*....|....*....|
gi 1371832456 245 LAVGAQQYLYEQNYLWGDFAAAAVLSGLPI 274
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
112-280 |
1.62e-08 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 53.46 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 112 RMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFdqignHVSWLGLNTHGAVIVASLGGMALHIWTIKGYFDSIDRSLEEA 191
Cdd:pfam00528 11 RRGRRLDRLLRPLIDLLQALPSFVLAILLVVIA-----ILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 192 AIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLVDTDKLTLAVGAQQYLYEQNYLWGDFAAAAVLSG 271
Cdd:pfam00528 86 ARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGPVLAAALILLL 165
|
....*....
gi 1371832456 272 LPITVIFLY 280
Cdd:pfam00528 166 LNLLVDILQ 174
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
85-279 |
2.58e-06 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 48.52 E-value: 2.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 85 LWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGNHVSWLGLNTHGAVIV 164
Cdd:TIGR03262 56 LGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSIYGFWG 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 165 ASLGGM------ALHIWTIKgyFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLV 238
Cdd:TIGR03262 136 IVIGEVfytfphALMILVTA--LSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGG 213
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1371832456 239 DTDKLTLAVgAQQYLYEQNYLWGdfAAAAVLSGLPITVIFL 279
Cdd:TIGR03262 214 DYNVLATDI-YKQVIGQQNFPMG--AVVGVLLLLPALLAFG 251
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| malG |
PRK10998 |
maltose ABC transporter permease MalG; |
1-296 |
0e+00 |
|
maltose ABC transporter permease MalG;
Pssm-ID: 182891 Cd Length: 296 Bit Score: 504.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 1 MAMVQPRSTRYRVLVSHLGMLAFIAIILFPLLMVISISFRSGNFASGSLLPENPSLEHWYLALGIPYTDEAGVTTQPPFP 80
Cdd:PRK10998 1 MAMVQPKSQKLRLFATHLLLLGFIALIMFPLLMVIAISLREGNFATGSLIPEQISWEHWKLALGFSVEHADGRVTPPPFP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 81 VLLWLWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGNHVSWLGLNTHG 160
Cdd:PRK10998 81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVLSLVALYALFDRLGQYIPFIGLNTHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 161 AVIVASLGGMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLVDT 240
Cdd:PRK10998 161 GVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1371832456 241 DKLTLAVGAQQYLYEQNYLWGDFAAAAVLSGLPITVIFLYCQKWIVGGLTAGGVKG 296
Cdd:PRK10998 241 NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVGGLTAGGVKG 296
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
3-296 |
1.03e-115 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 334.43 E-value: 1.03e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 3 MVQPRSTRYRVLVSHLGMLAFIAIILFPLLMVISISFRSGNF-ASGSLLPENPSLEHWYLALGipytdeagvttqpPFPV 81
Cdd:COG3833 5 KSRKRRRRLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSlYSSSLIPENFTLENYKKLFT-------------ETPF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 82 LLWLWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGnhvswlGLNTHGA 161
Cdd:COG3833 72 LRWFLNSLIVAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALG------LLNTLLG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 162 VIVASLGG-MALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLVDT 240
Cdd:COG3833 146 LILVYLGGaIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSP 225
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1371832456 241 DKLTLAVGAQQYLYEQ-NYLWGDFAAAAVLSGLPITVIFLYCQKWIVGGLTAGGVKG 296
Cdd:COG3833 226 ENYTLAVGLYSFVSDQrNTNWGVFAAGAVLVAIPIVILFLFLQRYLVSGLTAGGVKG 282
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
6-296 |
7.66e-69 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 214.96 E-value: 7.66e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 6 PRSTRYRVLVsHLGMLAFIAIILFPLLMVISISFRSGNFA---SGSLLPENPSLEHWYLALgipytdeagvtTQPPFpvL 82
Cdd:COG0395 8 RRRRLGRILL-YLLLILLALLFLFPLYWMVVTSFKPPAEIfsgPPSLLPSEFTLENYRAAF-----------TDGPF--G 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 83 LWLWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGnhvswlGLNTHGAV 162
Cdd:COG0395 74 RYLLNSLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLG------LLNTYWGL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 163 IVASLG-GMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLVDTD 241
Cdd:COG0395 148 ILPYLAfGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILLTSPD 227
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1371832456 242 KLTLAVGAQQYLYEQNYLWGDFAAAAVLSGLPITVIFLYCQKWIVGGLTAGGVKG 296
Cdd:COG0395 228 LRTLPVGLASFQGQYGTDWGLLMAAAVIATLPVLILFLFLQRYFVRGLTAGAVKG 282
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
8-280 |
7.46e-27 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 105.58 E-value: 7.46e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 8 STRYRVLVSHLGMLAFIAIILFPLLMVISISFRSGNFasGSLLPENPSLEHWYLALGIPYTDEAgvttqppfpvllwLWN 87
Cdd:COG1177 1 SSRLGRLLLRLFLALVLLFLYLPILVLVLYSFNDSWF--LTFPPEGFTLRWYAELFSDPRLLDA-------------LLN 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 88 SIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGNHVSWLGLnthgaVIVASL 167
Cdd:COG1177 66 SLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLWGL-----ILAHVV 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 168 GGMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASvLLVDTDKLTLAV 247
Cdd:COG1177 141 FTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITL-FLAGPGVTTLPV 219
|
250 260 270
....*....|....*....|....*....|...
gi 1371832456 248 GAQQYLYEQNYLWGdFAAAAVLSGLPITVIFLY 280
Cdd:COG1177 220 YIYSMIRRGISPEI-NALSTLLILLSLLLLLLA 251
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
7-296 |
2.90e-20 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 90.61 E-value: 2.90e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 7 RSTRYRVLVSHLGMLAFIAIILFPLLMVISISFRsgnfasgsllpenPSLEHWYLALGIPYTDEAgvttqppfpvllwLW 86
Cdd:COG1178 4 RPRRRPRLLLLLLALLLALLVLLPLLALLLRAFT-------------DGLANFWALLSDPYLWRA-------------LG 57
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 87 NSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIG--NHV--SWLGLNT---- 158
Cdd:COG1178 58 NTLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGllNTLlrALFGLEPpdiy 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 159 --HGAVIVASLGGMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVL 236
Cdd:COG1178 138 glGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVL 217
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1371832456 237 LVDTDklTLAVGA-QQYLYEqnylwGDFAAAAVLSG--LPITVIFLYCQKWIVGGLTAGGVKG 296
Cdd:COG1178 218 GGGYT--TLTTAIyQAWLGD-----FDLGAAAALALvlLLLVLLLLLLERRLRRRRRYATVGG 273
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
85-274 |
1.24e-18 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 81.56 E-value: 1.24e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 85 LWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGNHVSWLGLnTHGAVIV 164
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALIL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 165 ASLGGMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLVDTDKLT 244
Cdd:cd06261 80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159
|
170 180 190
....*....|....*....|....*....|
gi 1371832456 245 LAVGAQQYLYEQNYLWGDFAAAAVLSGLPI 274
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLLS 189
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
10-269 |
1.20e-17 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 82.90 E-value: 1.20e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 10 RYRVLVSHLGMLAFIAIILFPLLMVISISFRSGnfasgslLPENPSLEHWYLALGIPYTdeagvttqppfpvLLWLWNSI 89
Cdd:COG1178 285 RWRWLALALCLLLVLLGLLLPLLALLLWSLTKA-------LDDNLTLDNYRFVLLDPSL-------------LRALLNSL 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 90 KVAVVSSVLILALSTTSAYAFARMRFAGKGFVLK-SMLIFQMFPPVLSLVALYALfdqigNHVSWLGL-NTHGAVIVA-S 166
Cdd:COG1178 345 LLALLAALLAVLLALLLAYLVRRRRGRLARLLDRlAMLPYAVPGIVLGLGLLLLF-----NRPLPLLLyGTLAILVLAyV 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 167 LGGMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPmASVLLVDTDKLTLA 246
Cdd:COG1178 420 VRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELS-ATLLLRPPGFETLA 498
|
250 260
....*....|....*....|...
gi 1371832456 247 VGAqqYLYEQNYLWGDFAAAAVL 269
Cdd:COG1178 499 VLI--YQLASSGRYGEAAALALL 519
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
1-279 |
3.76e-17 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 79.42 E-value: 3.76e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 1 MAMVQPRSTRYRVLVShLGMLAFIAIILFPLLMVISISFRSGNFASGslLPENPSLEHWYLALGIPYTDEAgvttqppfp 80
Cdd:COG1176 1 MSAALRRRLRPLLLLL-PALLWLLLFFVLPLLLLLVYSFTTRDPYGG--VVPGFTLENYARLFTDPLYLKV--------- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 81 vllwLWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLkSMLIFQMFPPVLslVALYALFDQIGNH------VSWL 154
Cdd:COG1176 69 ----LLRTLWIALLTTLICLLLGYPIAYFLARAPPRWRNLLL-LLVILPFWTSFL--VRTYAWIVLLGRNgllnslLLAL 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 155 G--------LNTHGAVIVaslgGMAlHIW------TIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFI 220
Cdd:COG1176 142 GlideplrlLYTEFAVVI----GLV-YVYlpfmvlPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSL 216
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1371832456 221 LAFIMTIMEYpMASVLLVDTDKLTLAvgaqQYLYEQNYLWGDFAAAAVLSGLPITVIFL 279
Cdd:COG1176 217 LVFIPALGAF-VTPALLGGGKVLMIG----NLIYQQFLSALNWPLAAALAVVLLLIVLL 270
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
85-223 |
2.08e-15 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 73.54 E-value: 2.08e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 85 LWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGfVLKSMLIFQM-FPPVLSLVALYALFDQ---IGNHV-SWLGL--- 156
Cdd:COG4149 9 LWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKG-LLEALVTLPLvLPPTVLGFYLLLLFGRngpLGQLLeELFGIslv 87
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1371832456 157 -NTHGAVIVASLGGMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAF 223
Cdd:COG4149 88 fTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAF 155
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
85-230 |
2.03e-14 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 71.70 E-value: 2.03e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 85 LWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQ---IGNHVSWLGLN---T 158
Cdd:COG0555 56 LKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPngwLGQLLAPLGIKvafT 135
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1371832456 159 HGAVIVASLG-GMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEY 230
Cdd:COG0555 136 PLGIVLAQTFvSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEF 208
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
20-287 |
1.60e-13 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 69.39 E-value: 1.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 20 MLAFIAIILFPLLMVISISFRSGNFASGSllPENPSLEHWYLALGIPYTDEAgvttqppfpvllwLWNSIKVAVVSSVLI 99
Cdd:COG1175 28 LLLLLVFVLYPLLYTLYLSFTDWNLLGPP--PEFVGLDNYARLFTDPRFWNA-------------LGNTLLFTVVSVPLQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 100 LALSTTSAYAFARmRFAGKGFVLKSMLIFQMFPPVLSLVALYALFD-QIG--NHV-SWLGLNTHG----------AVIVA 165
Cdd:COG1175 93 LVLGLLLALLLNR-KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNpDYGllNALlGALGLEPINwlgdpslalpAVIIV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 166 SlggmalhIWTIKGYF--------DSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLL 237
Cdd:COG1175 172 T-------VWKGTGFNmliflaglQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDLVYVLT 244
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1371832456 238 ---VDTDKLTLAVgaqqYLYEQNYLWGDF---AAAAVLSGLpITVIFLYCQKWIVG 287
Cdd:COG1175 245 gggPGNSTTTLVL----YIYQTAFQQFDFgyaSAIAVVLFL-IILVLTLLQLRLLR 295
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
88-223 |
1.80e-10 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 59.55 E-value: 1.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 88 SIKVAVVSSVLILALSTTSAYAFARMRFAGKGfVLKSMLIFQM-FPPVLSLVALYALFDQIGNHVSWL--------GLNT 158
Cdd:PRK09421 14 SLKVSSVAVLFSLPFGILVAWLLARCRFPGKS-LLDSLLHLPLvLPPVVTGYLLLISMGRRGFIGQWLyewfgisfAFSW 92
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1371832456 159 HGAVIVASLGGMALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAF 223
Cdd:PRK09421 93 RGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAF 157
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
112-280 |
1.62e-08 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 53.46 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 112 RMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFdqignHVSWLGLNTHGAVIVASLGGMALHIWTIKGYFDSIDRSLEEA 191
Cdd:pfam00528 11 RRGRRLDRLLRPLIDLLQALPSFVLAILLVVIA-----ILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 192 AIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLVDTDKLTLAVGAQQYLYEQNYLWGDFAAAAVLSG 271
Cdd:pfam00528 86 ARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGPVLAAALILLL 165
|
....*....
gi 1371832456 272 LPITVIFLY 280
Cdd:pfam00528 166 LNLLVDILQ 174
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
86-227 |
1.66e-08 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 54.22 E-value: 1.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 86 WNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGNHVSWLGLnthgaviva 165
Cdd:PRK09500 60 QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSL--------- 130
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 166 slggMALHIW--------TIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTI 227
Cdd:PRK09500 131 ----LFAHITfclpfvvvTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSL 196
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
107-230 |
3.86e-08 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 53.09 E-value: 3.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 107 AYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGnhvsWLG--LNTHGAVIVASLGGMALH---------IW 175
Cdd:CHL00187 79 AWVLVRYNFPGKRLLDAAVDLPFALPTSVAGLTLATVYGDNG----WIGhlLSHLGIQIVFTKLGVLLAmifvsfpfvVR 154
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1371832456 176 TIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEY 230
Cdd:CHL00187 155 TIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEY 209
|
|
| PRK10973 |
PRK10973 |
sn-glycerol-3-phosphate ABC transporter permease UgpE; |
14-289 |
7.83e-08 |
|
sn-glycerol-3-phosphate ABC transporter permease UgpE;
Pssm-ID: 182875 [Multi-domain] Cd Length: 281 Bit Score: 52.43 E-value: 7.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 14 LVSHLGMLAFIAIILFPL---LMVISISFRSGNFASGSLLPENPSLEHwylalgIPYTDEAGV-TTQPPFPVLLWlwNSI 89
Cdd:PRK10973 10 IFSHTMLILGIAVILFPLyvaFVAATLDKQAVFAVPMTLIPGTHLLEN------IANIWVNGVgNNSAPFGRMLL--NSF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 90 KVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFP------PVLSLVALYALFDqignhvSWLGLNTHgavI 163
Cdd:PRK10973 82 VMAFSITVGKITVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPvevrifPTVEVIANLKMLD------SYAGLTLP---L 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 164 VASlggmALHIWTIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYpMASVLLVDTDKL 243
Cdd:PRK10973 153 MAS----ATATFLFRQFFMTLPDELVEAARIDGASPMRFFWDIVLPLSKTNLAALFVITFIYGWNQY-LWPLLIITDVSL 227
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1371832456 244 TLAVGAQQYLY---EQNYLWGDFAAAAVLSGLPITVIFLYCQKWIVGGL 289
Cdd:PRK10973 228 GTAVAGIKGMIatgEGTTEWNQVMAAMLLTLIPPVVIVLAMQRAFVRGL 276
|
|
| LplB |
COG4209 |
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and ... |
183-222 |
2.16e-06 |
|
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 443357 [Multi-domain] Cd Length: 316 Bit Score: 48.16 E-value: 2.16e-06
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1371832456 183 SIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILA 222
Cdd:COG4209 202 GIDPELYEAAAIDGAGRWQQIWHITLPGIRPTIVILLILN 241
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
85-279 |
2.58e-06 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 48.52 E-value: 2.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 85 LWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLIFQMFPPVLSLVALYALFDQIGNHVSWLGLNTHGAVIV 164
Cdd:TIGR03262 56 LGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSIYGFWG 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 165 ASLGGM------ALHIWTIKgyFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMASVLLV 238
Cdd:TIGR03262 136 IVIGEVfytfphALMILVTA--LSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGG 213
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1371832456 239 DTDKLTLAVgAQQYLYEQNYLWGdfAAAAVLSGLPITVIFL 279
Cdd:TIGR03262 214 DYNVLATDI-YKQVIGQQNFPMG--AVVGVLLLLPALLAFG 251
|
|
| cysW |
PRK11602 |
sulfate/thiosulfate ABC transporter permease CysW; |
85-279 |
1.08e-03 |
|
sulfate/thiosulfate ABC transporter permease CysW;
Pssm-ID: 183225 Cd Length: 283 Bit Score: 39.73 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 85 LWNSIKVAVVSSVLILALSTTSAYAFARMRFAGKGFVLKSMLI-FQMFPPVLSLvaLYALFDQIGnhvSWLG--LNTHGA 161
Cdd:PRK11602 66 IWLTVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIpFAVSPVVAGL--VYLLFYGSN---GPLGgwLDEHNL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 162 VIVASLGGMALHIWTIKGYFdsIDRSL-----------EEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEY 230
Cdd:PRK11602 141 QLMFSWPGMVLVTIFVTCPF--VVRELvpvmlsqgsqeDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF 218
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1371832456 231 PMASVLLVDTDKLTLAVGAQQYLYEQNY-LWGDFAAAAVLSGLPITVIFL 279
Cdd:PRK11602 219 GAVSVVSGSIRGETLSLPLQIELLEQDYnTVGSFTAAALLTLMAIITLFL 268
|
|
| PRK10592 |
PRK10592 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
30-234 |
1.27e-03 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182574 Cd Length: 281 Bit Score: 39.84 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 30 PLLMVISISFRSGNFASgslLPENPSLeHWYLALgipYTDEAGVTTqppfpVLLwlwnSIKVAVVSSVLILALSTTSAYA 109
Cdd:PRK10592 26 PMLMLVIYSFNSSKLVT---VWAGWST-RWYGEL---FRDDAMMSA-----VGL----SLTIAACAATAAAILGTIAAVV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 110 FARM-RFAGK---GFVLKSMLIFqmfPPVLSLVALYALFDQIGNHVSWLGLNTHGAVIVASLGGMALHIWT-IKGYFDSI 184
Cdd:PRK10592 90 MVRFgRFRGSngfAFMITAPLVM---PDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVvISSRLREL 166
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1371832456 185 DRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEYPMAS 234
Cdd:PRK10592 167 DRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIAS 216
|
|
| YnjC |
COG4135 |
ABC-type uncharacterized transport system YnjBCD, permease component [General function ... |
18-230 |
3.78e-03 |
|
ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];
Pssm-ID: 443310 [Multi-domain] Cd Length: 564 Bit Score: 38.70 E-value: 3.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 18 LGMLAFIAIILFPLLMVISISFRSgnFASG----SLLPENPSLEHWylalgipyTDEAGVTTQPpfpvllwLWNSIKVAV 93
Cdd:COG4135 304 LGLALMLLIALLSLLGLALLLLWS--FAGRwrfpDALPSSWTLRFW--------QRAAPGLLEP-------LGNTLLLAL 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 94 VSSVLILALSTtsAYAFARMRFAGKGFVLKSMLIF--QMFPPVLSLVALYALFDQIGNHVSWLglnthgAVIVASLGGMA 171
Cdd:COG4135 367 ASALIALVLVL--ACLEAEARRGRRPGRRALWLLYlpLLVPQIAFLFGLQVLLLRLGLDGTWL------AVIWAHLVFVL 438
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 172 LHIW-TIKGYFDSIDRSLEEAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIMEY 230
Cdd:COG4135 439 PYVFlSLAGPWRALDPRYAQVAASLGASPWRVFWRVKLPLLLRPILTAAAVGFAVSVAQY 498
|
|
| DppC |
COG1173 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
7-228 |
9.47e-03 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440786 [Multi-domain] Cd Length: 275 Bit Score: 37.01 E-value: 9.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 7 RSTRYRVLVSHLGMLAFIAIILFPLLMVISISFRSGNFASGSLLPEN--PSLEHWylaLGipyTDEAGvttQPPFPVLLW 84
Cdd:COG1173 6 RRAWRRLRRNPLAVIGLVILLLLVLLALFAPLLAPYDPTAQDLAARLqpPSAAHW---LG---TDQLG---RDVLSRLLY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1371832456 85 -LWNSIKVAVVSSVLILALSTT----SAYAFAR-----MRFagkgfvlksMLIFQMFPPVLSLVALYALFdqiGNHVSWL 154
Cdd:COG1173 77 gARISLLVGLLAVLIALVIGVLlgllAGYFGGWvdavlMRL---------VDVLLAFPSLLLAIALVAVL---GPGLLNV 144
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1371832456 155 GLnthgAVIVASLGGMALhiwTIKGYFDSIdRSLE--EAAIVDGATTWQAFRYILLPLSVPILVVVFILAFIMTIM 228
Cdd:COG1173 145 IL----ALGLTGWPGYAR---LVRAQVLSL-REREyvEAARALGASPLRIIFRHILPNVLPPLIVQATLGIASAIL 212
|
|
| |
