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Conserved domains on  [gi|1371994734|ref|WP_106873958|]
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PopZ family protein [Candidatus Phycorickettsia trachydisci]

Protein Classification

PopZ family protein( domain architecture ID 11467366)

PopZ family protein is a DUF2497 domain-containing protein, similar to pole-organizing protein PopZ, a proline-rich polar protein required to anchor the separated chromosome origins at the cell poles, a function that is essential for maintaining chromosome organization and normal cell division

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PopZ COG3827
Cell pole-organizing protein PopZ [Cell cycle control, cell division, chromosome partitioning]; ...
 71-146 1.14e-09

Cell pole-organizing protein PopZ [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 443039  Cd Length: 81  Bit Score: 51.85  E-value: 1.14e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1371994734  71 SEGICDKSAITDGESvyNLSAFED-IGAINARILNELADiknqlENNQAGLKGWLNDNLPQIVSGLVKKEIKKLNVK 146
Cdd:COG3827    12 AERLLSEEAAEAVAS--AFAALASaILSNGARTLEDLVR-----EMLRPMLKEWLDENLPQLVERLVREEIERVARG 81
 
Name Accession Description Interval E-value
PopZ COG3827
Cell pole-organizing protein PopZ [Cell cycle control, cell division, chromosome partitioning]; ...
 71-146 1.14e-09

Cell pole-organizing protein PopZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443039  Cd Length: 81  Bit Score: 51.85  E-value: 1.14e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1371994734  71 SEGICDKSAITDGESvyNLSAFED-IGAINARILNELADiknqlENNQAGLKGWLNDNLPQIVSGLVKKEIKKLNVK 146
Cdd:COG3827    12 AERLLSEEAAEAVAS--AFAALASaILSNGARTLEDLVR-----EMLRPMLKEWLDENLPQLVERLVREEIERVARG 81
DUF2497 pfam10691
Protein of unknown function (DUF2497); Members of this family belong to the ...
 120-143 1.05e-06

Protein of unknown function (DUF2497); Members of this family belong to the Alphaproteobacteria. The function of the family is not known.


Pssm-ID: 431438  Cd Length: 70  Bit Score: 43.79  E-value: 1.05e-06
                          10        20
                  ....*....|....*....|....
gi 1371994734 120 LKGWLNDNLPQIVSGLVKKEIKKL 143
Cdd:pfam10691  45 LKEWLDANLPSLVERLVRAEIERI 68
 
Name Accession Description Interval E-value
PopZ COG3827
Cell pole-organizing protein PopZ [Cell cycle control, cell division, chromosome partitioning]; ...
 71-146 1.14e-09

Cell pole-organizing protein PopZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443039  Cd Length: 81  Bit Score: 51.85  E-value: 1.14e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1371994734  71 SEGICDKSAITDGESvyNLSAFED-IGAINARILNELADiknqlENNQAGLKGWLNDNLPQIVSGLVKKEIKKLNVK 146
Cdd:COG3827    12 AERLLSEEAAEAVAS--AFAALASaILSNGARTLEDLVR-----EMLRPMLKEWLDENLPQLVERLVREEIERVARG 81
DUF2497 pfam10691
Protein of unknown function (DUF2497); Members of this family belong to the ...
 120-143 1.05e-06

Protein of unknown function (DUF2497); Members of this family belong to the Alphaproteobacteria. The function of the family is not known.


Pssm-ID: 431438  Cd Length: 70  Bit Score: 43.79  E-value: 1.05e-06
                          10        20
                  ....*....|....*....|....
gi 1371994734 120 LKGWLNDNLPQIVSGLVKKEIKKL 143
Cdd:pfam10691  45 LKEWLDANLPSLVERLVRAEIERI 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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