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Conserved domains on  [gi|1392509616|ref|WP_109642327|]
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SemiSWEET family sugar transporter [Lentzea atacamensis]

Protein Classification

SemiSWEET family sugar transporter( domain architecture ID 10008285)

SemiSWEET family sugar transporter similar to protein MJ0110 Bradyrhizobium diazoefficiens sugar transporter SemiSWEET that mediates sucrose transmembrane transport down a concentration gradient

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SWEET COG4095
Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism]; ...
 1-81 2.21e-25

Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism];


:

Pssm-ID: 443271  Cd Length: 83  Bit Score: 89.86  E-value: 2.21e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1392509616  1 MTVLGLAAGALTTGCWLPQLLKAWRTRSARDFSWAYLAVFGTGIALWICYGVAMRDLAIVVTNTLTISLTLGVVGLKLRF 80
Cdd:COG4095    3 IEIIGLLAGILTTISFLPQVIKTWKTKSTKDISLGMYLIFTTGVALWLIYGILIGDLPIILANAITLVLALIILVLKLRY 82


                 .
gi 1392509616 81 D 81
Cdd:COG4095   83 R 83
 
Name Accession Description Interval E-value
SWEET COG4095
Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism]; ...
 1-81 2.21e-25

Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism];


Pssm-ID: 443271  Cd Length: 83  Bit Score: 89.86  E-value: 2.21e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1392509616  1 MTVLGLAAGALTTGCWLPQLLKAWRTRSARDFSWAYLAVFGTGIALWICYGVAMRDLAIVVTNTLTISLTLGVVGLKLRF 80
Cdd:COG4095    3 IEIIGLLAGILTTISFLPQVIKTWKTKSTKDISLGMYLIFTTGVALWLIYGILIGDLPIILANAITLVLALIILVLKLRY 82


                 .
gi 1392509616 81 D 81
Cdd:COG4095   83 R 83
SemiSWEET_2 NF037968
SemiSWEET transporter; The SWEET (Sugars Will Eventually be Exported Transporter) is a ...
 5-80 1.77e-21

SemiSWEET transporter; The SWEET (Sugars Will Eventually be Exported Transporter) is a superfamily of sugar transporters found in both eukaryotes and prokaryotes. Eukaryotic SWEETs usually have seven transmembrane helices (TMHs), but most prokaryotic SWEETs (SemiSWEETs) have only three TMHs. Proteins of this family have 3 TMHs.


Pssm-ID: 411573  Cd Length: 76  Bit Score: 79.87  E-value: 1.77e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1392509616  5 GLAAGALTTGCWLPQLLKAWRTRSARDFSWAYLAVFGTGIALWICYGVAMRDLAIVVTNTLTISLTLGVVGLKLRF 80
Cdd:NF037968   1 GYVAATLTTVAFLPQVIKTWKTKDTKDISLGMYLVFTTGVALWLIYGILIGDLPIILANAVTLLLAGIILVLKLRY 76
 
Name Accession Description Interval E-value
SWEET COG4095
Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism]; ...
 1-81 2.21e-25

Sugar transporter, SemiSWEET family, contains PQ motif [Carbohydrate transport and metabolism];


Pssm-ID: 443271  Cd Length: 83  Bit Score: 89.86  E-value: 2.21e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1392509616  1 MTVLGLAAGALTTGCWLPQLLKAWRTRSARDFSWAYLAVFGTGIALWICYGVAMRDLAIVVTNTLTISLTLGVVGLKLRF 80
Cdd:COG4095    3 IEIIGLLAGILTTISFLPQVIKTWKTKSTKDISLGMYLIFTTGVALWLIYGILIGDLPIILANAITLVLALIILVLKLRY 82


                 .
gi 1392509616 81 D 81
Cdd:COG4095   83 R 83
SemiSWEET_2 NF037968
SemiSWEET transporter; The SWEET (Sugars Will Eventually be Exported Transporter) is a ...
 5-80 1.77e-21

SemiSWEET transporter; The SWEET (Sugars Will Eventually be Exported Transporter) is a superfamily of sugar transporters found in both eukaryotes and prokaryotes. Eukaryotic SWEETs usually have seven transmembrane helices (TMHs), but most prokaryotic SWEETs (SemiSWEETs) have only three TMHs. Proteins of this family have 3 TMHs.


Pssm-ID: 411573  Cd Length: 76  Bit Score: 79.87  E-value: 1.77e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1392509616  5 GLAAGALTTGCWLPQLLKAWRTRSARDFSWAYLAVFGTGIALWICYGVAMRDLAIVVTNTLTISLTLGVVGLKLRF 80
Cdd:NF037968   1 GYVAATLTTVAFLPQVIKTWKTKDTKDISLGMYLVFTTGVALWLIYGILIGDLPIILANAVTLLLAGIILVLKLRY 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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