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Conserved domains on  [gi|1423923796|ref|WP_112307372|]
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MULTISPECIES: molecular chaperone [unclassified Providencia]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
4-223 3.12e-46

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 153.22  E-value: 3.12e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   4 LILTIILAWHFTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDIK----DEKNADSFIISPPLFKIKSK 79
Cdd:COG3121     8 LLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDqdagPDKATAPFVVTPPLFRLEPG 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  80 TEHAVRIYPdNVSKLPKDRESGFYLKARGIPPTSKNLEEGDTpeMIFVTAIIIKLYYRPNGIPEPNKNNFEQVKLKNKDG 159
Cdd:COG3121    88 KSQTVRIIR-TGPPLPQDRESLFRLNVDEIPPKDASEEGKNT--LQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGN 164
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1423923796 160 RWQFHNPTPYYMTIVD--FNMNGKNY-NDSILVSPFSYY----KLENTNESINVASWRFLDDNGAGTEVFR 223
Cdd:COG3121   165 GLTVTNPGPYYVTLSDlsLGAGGKKLkKGLGMVLPGSTRrwplPAGASLAAGGKVTWATINDYGGAVPLEA 235
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
4-223 3.12e-46

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 153.22  E-value: 3.12e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   4 LILTIILAWHFTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDIK----DEKNADSFIISPPLFKIKSK 79
Cdd:COG3121     8 LLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDqdagPDKATAPFVVTPPLFRLEPG 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  80 TEHAVRIYPdNVSKLPKDRESGFYLKARGIPPTSKNLEEGDTpeMIFVTAIIIKLYYRPNGIPEPNKNNFEQVKLKNKDG 159
Cdd:COG3121    88 KSQTVRIIR-TGPPLPQDRESLFRLNVDEIPPKDASEEGKNT--LQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGN 164
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1423923796 160 RWQFHNPTPYYMTIVD--FNMNGKNY-NDSILVSPFSYY----KLENTNESINVASWRFLDDNGAGTEVFR 223
Cdd:COG3121   165 GLTVTNPGPYYVTLSDlsLGAGGKKLkKGLGMVLPGSTRrwplPAGASLAAGGKVTWATINDYGGAVPLEA 235
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
2-219 1.23e-28

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 107.54  E-value: 1.23e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   2 IRLILTIILA-WHFTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGESPL-LIQMLLLDIKDEKNADsFIISPPLFKIKSK 79
Cdd:PRK15188    9 LRLLLLLSAAgLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVANADGSRSTD-FIITPPLFVIQPK 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  80 TEHAVRIYPDNVSkLPKDRESGFYLKARGIPPTSKNLEEGDTPEMifVTAIIIKLYYRPNGIPEPNKNNFEQVKLKNKDG 159
Cdd:PRK15188   88 KENILRIMYVGPS-LPTDRESVFYLNSKAIPSVDKNKLTGNSLQI--ATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERG 164
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796 160 RWQFHNPTPYYMTIVDFNMNGKNYNDSiLVSPFSYYKLENTNESInvaSWRFLDDNGAGT 219
Cdd:PRK15188  165 QLTITNPSPYYVSMVELYSAGKKLPNT-MVPPKGAITLPATPGQV---SLRTVNDFGATT 220
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
21-142 5.17e-27

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 99.97  E-value: 5.17e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  21 LSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLD----IKDEKNADSFIISPPLFKIKSKTEHAVRIYPDNvSKLPK 96
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDgneeGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTG-PPLPT 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1423923796  97 DRESGFYLKARGIPPTSKNLEEGDTpeMIFVTAIIIKLYYRPNGIP 142
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNG--LQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
4-223 3.12e-46

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 153.22  E-value: 3.12e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   4 LILTIILAWHFTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDIK----DEKNADSFIISPPLFKIKSK 79
Cdd:COG3121     8 LLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDqdagPDKATAPFVVTPPLFRLEPG 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  80 TEHAVRIYPdNVSKLPKDRESGFYLKARGIPPTSKNLEEGDTpeMIFVTAIIIKLYYRPNGIPEPNKNNFEQVKLKNKDG 159
Cdd:COG3121    88 KSQTVRIIR-TGPPLPQDRESLFRLNVDEIPPKDASEEGKNT--LQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLVGN 164
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1423923796 160 RWQFHNPTPYYMTIVD--FNMNGKNY-NDSILVSPFSYY----KLENTNESINVASWRFLDDNGAGTEVFR 223
Cdd:COG3121   165 GLTVTNPGPYYVTLSDlsLGAGGKKLkKGLGMVLPGSTRrwplPAGASLAAGGKVTWATINDYGGAVPLEA 235
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
2-219 1.23e-28

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 107.54  E-value: 1.23e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   2 IRLILTIILA-WHFTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGESPL-LIQMLLLDIKDEKNADsFIISPPLFKIKSK 79
Cdd:PRK15188    9 LRLLLLLSAAgLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVANADGSRSTD-FIITPPLFVIQPK 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  80 TEHAVRIYPDNVSkLPKDRESGFYLKARGIPPTSKNLEEGDTPEMifVTAIIIKLYYRPNGIPEPNKNNFEQVKLKNKDG 159
Cdd:PRK15188   88 KENILRIMYVGPS-LPTDRESVFYLNSKAIPSVDKNKLTGNSLQI--ATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERG 164
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796 160 RWQFHNPTPYYMTIVDFNMNGKNYNDSiLVSPFSYYKLENTNESInvaSWRFLDDNGAGT 219
Cdd:PRK15188  165 QLTITNPSPYYVSMVELYSAGKKLPNT-MVPPKGAITLPATPGQV---SLRTVNDFGATT 220
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
21-142 5.17e-27

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 99.97  E-value: 5.17e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  21 LSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLD----IKDEKNADSFIISPPLFKIKSKTEHAVRIYPDNvSKLPK 96
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDgneeGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTG-PPLPT 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1423923796  97 DRESGFYLKARGIPPTSKNLEEGDTpeMIFVTAIIIKLYYRPNGIP 142
Cdd:pfam00345  80 DRESLFWLNVLEIPPKDKPKGGQNG--LQLALRSRIKLFYRPAGLA 123
PRK15295 PRK15295
fimbrial assembly chaperone;
23-216 5.47e-26

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 100.40  E-value: 5.47e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  23 LGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDIK-DEKNADSFIISPPLFKIKSKTEHAVRIYPDNvSKLPKDRESG 101
Cdd:PRK15295   23 VGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDpQVTNKQAFIITPPLFRLDAGQKNSIRVIRSG-APLPADRESM 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796 102 FYLKARGIPPTSKNleeGDTPEMIFVTAIIIKLYYRPngiPEPNKNNFEQV--KLK-NKDGRW-QFHNPTPYYMTIVDFN 177
Cdd:PRK15295  102 YWLNIKGIPSIDDN---ASANRVEISINTQIKLIYRP---PALTKSTPDSQsqQLKwQTAGDViTVNNPTPYYMNFASVT 175
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1423923796 178 MNGKNYNDSILVSPFSY--YKLENTNESINVASWRFLDDNG 216
Cdd:PRK15295  176 LNSHEVKSATFVPPKSSasFKLGSTAAPHGTVTWRLISDYG 216
lfpB PRK15290
fimbrial chaperone;
3-217 2.70e-25

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 99.29  E-value: 2.70e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   3 RLILTIILA---WHFTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGES-PLLIQMLLLDI-KDEKNADSFIISPPLFKIK 77
Cdd:PRK15290   18 KLFTAIILSvflGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDPFnKEDKSKAPFTVIPPVSRLE 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  78 SKTEHAVRIYPDNVSKLPKDRESGFYLKARGIPPTSKNlEEGDTPEMIFVTAiiIKLYYRPNGIPEPNKNNFEQVKLKNK 157
Cdd:PRK15290   98 PSQEKVLRIIHTKGVSLPDDRESVFWLNIKNIPPSASN-KATNSLEIAVKTR--IKLFWRPASIRLIPEDAAPKVKWRRE 174
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1423923796 158 DGRWQFHNPTPYYMTIVDFNMNGKNYNDSiLVSPFSYYKLE-NTNESINVASWRFLDDNGA 217
Cdd:PRK15290  175 GRNLIAENPNPIHISVMDVIVDGHDVPLN-MIRPFETLTLPlPANSAGGQMTWRFINDYGA 234
PRK09926 PRK09926
fimbrial chaperone;
26-216 3.08e-24

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 96.33  E-value: 3.08e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  26 SRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDIKDEKNADS----FIISPPLFKIKSKTEHAVRIYPDNVSKLPKDRESG 101
Cdd:PRK09926   32 TRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSikvpFTATPPVSRIDPKRGQTIKLMYTASTALPKDRESV 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796 102 FYLKARGIPPTSKNLEEGD--TPEMIFVTAiiIKLYYRPNGIPEPNKNNFEQVK--LKNKDGRW--QFHNPTPYYMTI-- 173
Cdd:PRK09926  112 FWFNVLEVPPKPDAEKVANqsLLQLAFRTR--IKLFYRPDGLKGNPSEAPLALKwsWAGSEGKAslRVTNPTPYYVSFss 189
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1423923796 174 VDFNMNGKNYN-DSILVSPFSYYKLENTNESINVAS----WRFLDDNG 216
Cdd:PRK09926  190 GDLEAGGKRYPvDSKMIAPFSDESMKVKGLSGKASSgkvhFYAINDFG 237
PRK15195 PRK15195
molecular chaperone FimC;
4-225 3.47e-24

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 95.70  E-value: 3.47e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   4 LILTIILAWHFTLHA-GGLSLGQSRVIFTDSDKNKVVSIRN-EGESPLLIQMLLLDIKDEKNaDSFIISPPLFKIKSKTE 81
Cdd:PRK15195    9 MIIIFYLIISASVHAaGGIALGATRVIYPADAKQTSLAIRNsHTNERYLVNSWIENSSGVKE-KSFIVTPPLFVSEPKSE 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  82 HAVRI-YPDnvSKLPKDRESGFYLKARGIPPTSKNLEEGDTpemIFVTAII--IKLYYRPNGIPEPNKNNFEQVKLKNKD 158
Cdd:PRK15195   88 NTLRIiYAG--PPLAADRESLFWMNVKAIPSVDKNALEGRN---VLQLAILsrIKLFVRPINLQELPEEAPDTLKFSRSG 162
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1423923796 159 GRWQFHNPTPYYMTIVDFNMNGKNYnDSILVSPFSYYKLENTNESINVASWRFLDDNGAGTEVFRIN 225
Cdd:PRK15195  163 NHLKVHNPSPYYVTLVNLQVGSQKL-GNAMIAPKVNSQIPLPSGVQGKLKFQTVNDYGAVTPAREVN 228
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
17-220 2.43e-22

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 90.99  E-value: 2.43e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  17 HAGGLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDIKDE-KNADS-FIISPPLFKIKSKTEHAVRIYPDNvSKL 94
Cdd:PRK15299   20 HAAGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETgASGDApFMVTPPLFRLNGGQKNVLRIIRTG-GNL 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  95 PKDRESGFYLKARGIPptSKNLEEGDTPEMIFVTAiIIKLYYRPNGIPEPNKNNFEQVKLKNKDGRWQFHNPTPYYMTIV 174
Cdd:PRK15299   99 PEDRESLYWLDIKSIP--SSNPDNKHNTLMLAVKA-EFKLIYRPKALTQKPEEVADRLTWSRQGRTLTVKNPTPYYMNFA 175
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1423923796 175 DFNMNGKNYNDSILVSPFSYYKLENTNESINVASWRFLDD-NGAGTE 220
Cdd:PRK15299  176 TLSVGSQKVKAPRYVAPFGNAQYTLPAAASGPIAWSIINDfGGTGPE 222
PRK15211 PRK15211
fimbrial chaperone;
4-225 2.38e-21

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 88.34  E-value: 2.38e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   4 LILTIILAWHFTLHAGgLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDIKDEKNADSFIISPPLFKIKSKTEHA 83
Cdd:PRK15211    8 LVSLLSLAVCGQAMAA-FVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDNTTQGSSTVYMVPAPPFFKVRPKEKQI 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  84 VRIYPDNvSKLPKDRESGFYLKARGIPPTSKnleEGDTPEMIFVTAIIIKLYYRPNGIPEPNKNNFEQVKLKNKDGRWQF 163
Cdd:PRK15211   87 IRIMKTD-SALPKDRESLFWLNVQEIPPKPK---ASEGNVLAVALNTQVKLIYRPKALKEGRENAEKNLQIIHRGGETYL 162
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1423923796 164 HNPTPYYMTIVDFNMNGK--NYNDSI-----LVSPFSYYKLEN--TNESINVASwrfLDDNGaGTEVFRIN 225
Cdd:PRK15211  163 KNPTPYYFAVTGVKLNGQpvKLSDRVmneiaQLAPFSEVSLGKlsLNGTVTVQA---VNDWG-GTQDYTLK 229
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
1-216 9.04e-21

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 87.03  E-value: 9.04e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   1 MIRLILTIILAWHFTLHAGGLSLGqSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLD----IKDEKNADSFIISPPLFKI 76
Cdd:PRK15253   16 MKILSAVLLSAIILPAHAGIVIYG-TRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDgntsLPPEKIQVPFMLTPPVARV 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  77 KSKTEHAVRIyPDNVSKLPKDRESGFYLKARGIPPTSKnlEEGDTPEMIFVTAIIIKLYYRPNGIPEPNKNNFEQVKLKN 156
Cdd:PRK15253   95 AAESGQQIKI-KKMPNSLPDNKESLFYLNVLDIPPNSQ--ENAGKNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIGLFR 171
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1423923796 157 KDGRWQFHNPTPYYMTIVDFNMNGKNYND-SILVSPFSYYKLENTNESINVASWRFLDDNG 216
Cdd:PRK15253  172 SNKTVIMKNDTANWITVTDVKAGNTKINDqTIMLPPLSTQNINMKYASTSQYEVTIIDDNG 232
PRK15249 PRK15249
fimbrial chaperone;
4-193 1.09e-20

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 87.16  E-value: 1.09e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   4 LILTIILAWHFTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLL----LDIKDEKNADS-FIISPPLFKIKS 78
Cdd:PRK15249   13 LIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFddgdMNTSPENSSAMpFIATPPVFRIQP 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  79 KTEHAVRIYPDNVSKLPKDRESGFYLKARGIPPTskNLE-EGDTPEMIFVTAIIIKLYYRPNGIPEPNK--NNFeQVKLK 155
Cdd:PRK15249   93 KAGQVVRVIYNNTKKLPQDRESVFWFNVLQVPPT--NIGsDSGQNKMLVMLRSRIKLFYRPDGLGKPDNlaKKL-QIKTV 169
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1423923796 156 NkDGRWQF----HNPTPYYMTIVDFNM--NGKNYN-DSILVSPFS 193
Cdd:PRK15249  170 N-KGSGKSgiviVNPQPWFASLSNLNVkvNGASYNlDADMIAPFS 213
PRK15208 PRK15208
molecular chaperone LpfB;
18-189 1.75e-20

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 86.12  E-value: 1.75e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  18 AGGLSLGQSRVIFTDSDKNKVVSIRNEGES-PLLIQMLLLDIKDEKNAdSFIISPPLFKIKSKTEHAVRIYPDNVSkLPK 96
Cdd:PRK15208   20 AGGVALSSTRVIYDGSKKEASLTVNNKSKTeEFLIQSWIDDANGNKKT-PFIITPPLFKLDPTKNNVLRIVNITNT-LPQ 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  97 DRESGFYLKARGIPPTSKNLEEGDTPEMIFVTAIiiKLYYRPNGIPEPNKNNFEQVKLKNKDGRWQFHNPTPYYMTIVDF 176
Cdd:PRK15208   98 DRESVYWINVKAIPAKSEDAENKNVLQIAVRTRL--KLFYRPAGLKGNSMDAWNKLRFTRAGNQIKVENPSAFNLTFNQF 175
                         170
                  ....*....|...
gi 1423923796 177 NMNGKNYNDSILV 189
Cdd:PRK15208  176 YANGRDIEKAGMV 188
PRK15218 PRK15218
fimbrial assembly chaperone;
2-216 5.07e-19

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 81.95  E-value: 5.07e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   2 IRLILTIILAWHFTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLD----IKDEKNADSFIISPPLFKIK 77
Cdd:PRK15218    1 MKWMIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNgdtsLPPEKLQVPFIMTPPVIRVA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  78 SKTEHAVRIyPDNVSKLPKDRESGFYLKARGIPPTSKnlEEGDTPEMIFVTAIIIKLYYRPNGIPEPNKNNFEQVKLKNK 157
Cdd:PRK15218   81 ANSGQQLKI-KKLANNLPGDRESLFYLNVLDIPPNSD--ENKDKNIIKFALQNRIKLIYRPPGVQKVDKATFSRLQLLRA 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1423923796 158 DGRWQFHNPTPYYMTIVDFNMNGKNYNDSILVSPFSyYKLENTNESINVASWRFLDDNG 216
Cdd:PRK15218  158 PGSISVKNNSANWITIPEIKAKSKVNKETLLLAPWS-SQSITTTVVVNSYTVTLIDDSG 215
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
19-216 7.89e-19

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 81.67  E-value: 7.89e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  19 GGLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLL------DIKDEKNADSFIISPPLFKIKSKTEHAVRIYPDNvS 92
Cdd:PRK15192   22 AGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILpggrwpGTKNEGNITPFVVTPPLFMLSARQENSMRVVYTG-A 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  93 KLPKDRESGFYLKARGIPPTSKnleEGDTPEMIFVTAIiiKLYYRPNGIP-EPNKNNFEQVKLKNKDGRwQFHNPTPYYM 171
Cdd:PRK15192  101 PLPADRESLFTLSIAAIPSGKP---EANRVQMAFRSAL--KLLYRPEGLAgNPQQAYRHLIWSLTPDGA-TVRNPTPYYV 174
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1423923796 172 TIVDFNMNGKNYNDSILVSPFSYYKLENTNESIN-VASWRFLDDNG 216
Cdd:PRK15192  175 TLFLLRANERAQDNAGVVAPFATRQTDWCRHTVRcTVRWQSINDYG 220
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
4-173 1.22e-18

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 81.75  E-value: 1.22e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   4 LILTIILAWHFTLHAGgLSLGQSRVIFTDSDKNKVVSIRNEGES-PLLIQMLLLDIKDEKNADSFIISPPLFKIKSKTEH 82
Cdd:PRK15274   12 LIASVLLAAPLVSHSA-IVPDRTRVIFNGNENSITVTLKNGNATlPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDG 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  83 AVRIYP-DNVSKLPKDRESGFYLKARGIPPTSknlEEGDTPEMIFVTAiiIKLYYRPNGIP-EPNKNNFEQVKLK---NK 157
Cdd:PRK15274   91 QVKVQPlPAAASLPQDRESLFYFNVREIPPKS---DKPNTLQLALQTR--IKFFYRPVAVArQVDKTHPWQTKLTltyQG 165
                         170
                  ....*....|....*.
gi 1423923796 158 DGRWqFHNPTPYYMTI 173
Cdd:PRK15274  166 DGVI-FDNPTPFYLVI 180
PRK15224 PRK15224
pili assembly chaperone PapD;
21-222 2.04e-18

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 80.56  E-value: 2.04e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  21 LSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLlDIKDEKNADSFIISPPLFKIKSKTEHAVRIYPDNvSKLPKDRES 100
Cdd:PRK15224   30 VKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSV-KAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTG-GDMPTDRET 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796 101 GFYLKARGIPPT---SKNLEEGDTPEMIFVTAIIIKLYYRPN---GIPEPNKNNFEQVKLKNKdgrWQFHNPTPYYMTIV 174
Cdd:PRK15224  108 LQWVCIKAVPPEnepSDTQAKGATLDLNLSINVCDKLIFRPDavkGTPEDVAGNLRWVETGNK---LKVENPTPFYMNLA 184
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1423923796 175 DFNMNGKNYNDSILVSPFSYYKLENTNESINVASWRFLDDNGAGTEVF 222
Cdd:PRK15224  185 SVTVGGKPITGLEYIPPFADKTLNMPGSAHGDIEWRVITDFGGESHPF 232
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
4-217 2.84e-18

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 80.20  E-value: 2.84e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   4 LILTIILAWHfTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGES-PLLIQMLLLDiKDEKNADSFIISPPLFKIKSKTEH 82
Cdd:PRK15254    2 ILLALAAAWS-QYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTtPFLAQSWVTD-ADGVRTDALMALPPLQRIDAGQKS 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  83 AVRIYPDN--VSKLPKDRESGFYLKARGIPPTSknlEEGDTPEMIFVTAiiIKLYYRPNGIPEPNKNNFE-QVKLKNKDG 159
Cdd:PRK15254   80 QVRITQVRglTDKLPQDRETLFWFNVRGVPPKP---EDDNVLQLAMQSQ--LKLFYRPKAIIRSSSDQPErKLTAERNAG 154
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1423923796 160 RWQFHNPTPYYMTI----VDFNMNGKNYNDSILVSPFSYYKLENTNESINVASW-RFLDDNGA 217
Cdd:PRK15254  155 HLTLRNPTPYYITVawlgADRSHRLSGFREGVMVPPLGSLPLKAVLPAETRTLWvGYIDDYGG 217
PRK15233 PRK15233
fimbrial chaperone SefB;
20-223 8.04e-18

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 79.38  E-value: 8.04e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  20 GLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDiKDEKNADSFIISPPLFKIKSKTEHAVRIYPDNvSKLPKDRE 99
Cdd:PRK15233   41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQVYN-DDKSSKAPFIVTPPILKVESNARTRLKVIPTS-NLFNKNEE 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796 100 SGFYLKARGIPPTSKNleEGDTPEMI-------FVTAIIIKLYYRPNGIPEPNKNNFEQVKLKNKDGRWQFHNPTPYYMT 172
Cdd:PRK15233  119 SLYWLCVKGVPPLNDN--ESNNKNNIttnlnvnVVTNSCIKLIYRPKTIDLTTMEIADKLKLERKGNSIVIKNPTSSYVN 196
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1423923796 173 IVDFNMNGKNYN-DSILVSPFSYYKLENTNESinVASWRFLDDNGAgtEVFR 223
Cdd:PRK15233  197 IANIKSGNLSFNiPNGYIEPFGYAQLPGGVHS--KITLTILDDNGA--EIIR 244
PRK15246 PRK15246
fimbrial assembly chaperone;
25-193 3.54e-16

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 74.61  E-value: 3.54e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  25 QSRVIFTDSDKNKVVSIRNEGESPLLIQMLL----LDIKDEKNADSFIISPPLFKIKSKTEHAVRIYPDNVSKLPKDRES 100
Cdd:PRK15246   16 RTRIIFASDDVAQSLTLSNDNTTPMLLQVWTdagnIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSRQQLATDRES 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796 101 GFYLKARGIPP---TSKNLeegdTPEMIFVTAIIIKLYYRPNGIPEPNKNNFEQVKLKNKDGRWQFHNPTPYYMTIVDFN 177
Cdd:PRK15246   96 LFWLNIYQIPPvtqDIKNH----PRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPTSWYMSLTLTM 171
                         170
                  ....*....|....*.
gi 1423923796 178 MNGKNYNDsILVSPFS 193
Cdd:PRK15246  172 DNKKSIGD-IMVAPKT 186
PRK15285 PRK15285
fimbrial chaperone StfD;
5-173 6.38e-14

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 68.65  E-value: 6.38e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   5 ILTIILAWHFTLHAGgLSLGQSRVIFTDSDKNKVVSIRNEGES-PLLIQMLLLDIKDEKNADSFIISPPLFKIKSKTEHA 83
Cdd:PRK15285   12 VLLLLLGGYGSAQAA-IAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVEDEKGVKITSPLIVVPPVQRIEPSAIGQ 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  84 VRIYP-DNVSKLPKDRESGFYLKARGIPPTSknlEEGDTPEMIFVTAiiIKLYYRPNGIPEPNKNNFEQVK--LKNKDGR 160
Cdd:PRK15285   91 VKIQGmPALASLPQDRETLFYYNVREIPPQS---DKPNTLQIALQTR--IKVFYRPQALSKIDMQHPWQYKitLQRQGNG 165
                         170
                  ....*....|...
gi 1423923796 161 WQFHNPTPYYMTI 173
Cdd:PRK15285  166 YQVSNPTGYYVVL 178
PRK11385 PRK11385
fimbrial chaperone;
1-217 3.82e-12

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 63.61  E-value: 3.82e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   1 MIRLILTIILAWHFTlhaGGLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDIKDEKNADS------FIISPPLF 74
Cdd:PRK11385   11 LIFAVLSLLVAGELQ---AGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEAstvpapLLAAPPLI 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  75 KIKSKTEHAVRIYPDNVSKLPKDRESGFYLKARGIPptsknleEGDTPEMIFVTAI--IIKLYYRPNGIPEPNKNNFEQV 152
Cdd:PRK11385   88 LLKPGTTGTLRLLRTESDILPVDRETLFELSIASVP-------SGKVENQSVKVAMrsVFKLFWRPEGLPGDPLEAYQQL 160
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1423923796 153 KLKNKDGRWQFHNPTPYYMTIVDFNMNGKNYNDSILVSPFSYYKLENTNESINV-ASWRFLDDNGA 217
Cdd:PRK11385  161 RWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQAIAPChVAWRAINDYGG 226
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
3-169 7.40e-10

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 56.97  E-value: 7.40e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796   3 RLILTIILAWHFTLHAGGLSLGQSRVIFTDSDKNKVVSIRNEGESPLLIQMLLLDIKDEKnADSFIISPPLFKIKSKTEH 82
Cdd:PRK09918    8 LFTALVLLSSSSAVHAAGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTTLVDLPEDK-SKLLLVTPPVARVEPGQSQ 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423923796  83 AVRIYPDNVSKLPKDResgfYLKA--RGIPPTSKNLEEgdtpemifVTAII---IKLYYRPNGIPEpNKNNFEQVKLKNK 157
Cdd:PRK09918   87 QVRFILKSGSPLNTEH----LLRVsfEGVPPKPGGKNK--------VVMPIrqdLPVLIQPAALPV-VRDPWKLLVWSIS 153
                         170
                  ....*....|..
gi 1423923796 158 DGRWQFHNPTPY 169
Cdd:PRK09918  154 GNNLVVSNPSPY 165
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
164-220 7.99e-06

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 42.25  E-value: 7.99e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1423923796 164 HNPTPYYMTI--VDFNMNGKNY-NDSILVSPFS--YYKLENTNESINVASWRFLDDNGAGTE 220
Cdd:pfam02753   2 KNPTPYYVTFssLSLGGGGKELaLDPGMVAPFSsqTFAGLPAPAAGGTVSYTYINDYGGIVP 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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