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Conserved domains on  [gi|1423924282|ref|WP_112307858|]
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MULTISPECIES: TonB-dependent siderophore receptor [Providencia]

Protein Classification

TonB-dependent siderophore receptor( domain architecture ID 11469152)

TonB-dependent siderophore receptor acts as a channel to allow import of extracellular nutrients such as iron-siderophore complexes; similar to Yersinia enterocolitica ferrioxamine receptor

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
17-712 0e+00

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


:

Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 659.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  17 PCALLCAT-VSWSAMVSAEPVQPKQ-------DVIQVTASSDMDDDYVAPGVTTLGKMALKPREVAQSVSVIDREQIEKQ 88
Cdd:COG4773     1 AAALLAGSgLAAAAAGALAQAAAAAaaeattlPEVTVTGTAEGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  89 NLQTLDDVMQRATGVTSAPYV-KLTTAYYVRGFQIDSFEIDGVPalLGNMASSPQDMAVYERVEILRGSNGLLHGMGNPA 167
Cdd:COG4773    81 GATTLDDALRNVPGVTVSSYDgGGRDSFSIRGFSIDNYLRDGLP--LGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 168 ATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDYFYDVSDQQTRLMYGTVDIDVTPD 247
Cdd:COG4773   159 GLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDD 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 248 TLLRMGAQFQTIDSVTNMAGVPFgkDGSDLHLPRKTYLDVDWDRFKWDTSRSFAGIEHKINDNWQYKLNAEYQHVNARLL 327
Cdd:COG4773   239 TTLTLGAEYQDDDSTGDRGFLPL--DGTLLDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGR 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 328 YAGAWGNIDPVTGDGAMlMGGAYKFRNEQTSLDTSLNGKVDAWGLTHDVVVGASYSHasekqYSADLDPALNVPVNVYRW 407
Cdd:COG4773   317 SAYAYGAPDAATGTLTR-YASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSR-----YDSDSDSATAGTINIYNP 390
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 408 NPHSVPKPSigTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWWDVKTPTANFT-----ENGRLTPYGGVIWDFN 482
Cdd:COG4773   391 VYGNLPEPD--FDASDTDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGsttsyDDSAFTPRAGLVYDLT 468
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 483 PQWSWYSSYSTVYQPQTGKTWSGKMLKPVEGQTLETGVKGALFNGGLNLSGAIYQIDIKNNPQIDPAHPtggfnNYFISG 562
Cdd:COG4773   469 PGLSLYASYSESFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTDPDNP-----NFYVQV 543
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 563 GKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQGESYNTLTPRHMLRVWSNYDLP-WDERKWSLGGGMQAQSA 641
Cdd:COG4773   544 GEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDADALEGKRLTNVPRHTASLWTTYRFPsGALKGLGLGGGVRYVGE 623
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1423924282 642 YSTSNGNvTLRQGGYAIFNARLGYQIDETWTAAVNVNNVFDRRYYSGLFSPQWNNrYGDPRNVMFTLKADF 712
Cdd:COG4773   624 RYGDAAN-TFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYYASSGSRGYVY-YGAPRNVRLSLSYKF 692
 
Name Accession Description Interval E-value
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
17-712 0e+00

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 659.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  17 PCALLCAT-VSWSAMVSAEPVQPKQ-------DVIQVTASSDMDDDYVAPGVTTLGKMALKPREVAQSVSVIDREQIEKQ 88
Cdd:COG4773     1 AAALLAGSgLAAAAAGALAQAAAAAaaeattlPEVTVTGTAEGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  89 NLQTLDDVMQRATGVTSAPYV-KLTTAYYVRGFQIDSFEIDGVPalLGNMASSPQDMAVYERVEILRGSNGLLHGMGNPA 167
Cdd:COG4773    81 GATTLDDALRNVPGVTVSSYDgGGRDSFSIRGFSIDNYLRDGLP--LGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 168 ATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDYFYDVSDQQTRLMYGTVDIDVTPD 247
Cdd:COG4773   159 GLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDD 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 248 TLLRMGAQFQTIDSVTNMAGVPFgkDGSDLHLPRKTYLDVDWDRFKWDTSRSFAGIEHKINDNWQYKLNAEYQHVNARLL 327
Cdd:COG4773   239 TTLTLGAEYQDDDSTGDRGFLPL--DGTLLDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGR 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 328 YAGAWGNIDPVTGDGAMlMGGAYKFRNEQTSLDTSLNGKVDAWGLTHDVVVGASYSHasekqYSADLDPALNVPVNVYRW 407
Cdd:COG4773   317 SAYAYGAPDAATGTLTR-YASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSR-----YDSDSDSATAGTINIYNP 390
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 408 NPHSVPKPSigTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWWDVKTPTANFT-----ENGRLTPYGGVIWDFN 482
Cdd:COG4773   391 VYGNLPEPD--FDASDTDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGsttsyDDSAFTPRAGLVYDLT 468
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 483 PQWSWYSSYSTVYQPQTGKTWSGKMLKPVEGQTLETGVKGALFNGGLNLSGAIYQIDIKNNPQIDPAHPtggfnNYFISG 562
Cdd:COG4773   469 PGLSLYASYSESFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTDPDNP-----NFYVQV 543
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 563 GKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQGESYNTLTPRHMLRVWSNYDLP-WDERKWSLGGGMQAQSA 641
Cdd:COG4773   544 GEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDADALEGKRLTNVPRHTASLWTTYRFPsGALKGLGLGGGVRYVGE 623
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1423924282 642 YSTSNGNvTLRQGGYAIFNARLGYQIDETWTAAVNVNNVFDRRYYSGLFSPQWNNrYGDPRNVMFTLKADF 712
Cdd:COG4773   624 RYGDAAN-TFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYYASSGSRGYVY-YGAPRNVRLSLSYKF 692
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
72-712 4.52e-142

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 430.68  E-value: 4.52e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  72 EVAQSVSVIDREQIEKQNLQTLDDVMQRATGV--TSAPYVKLTTAYYVRGFQ----IDSFEIDGVPaLLGNMASSPQDMA 145
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVvvGGSGGTTQFGNITIRGFGlevdIDNVYLDGVP-LLSRGNLAIVDPA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 146 VYERVEILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDYF 225
Cdd:TIGR01783  80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSF 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 226 YDVSDQQTRLMYGTVDIDVTPDTLLRMGAQFQTIDSVTNMAGVPFGKDGSDLHLPRKTYLDVDWDR--FKWDTSRSFAGI 303
Cdd:TIGR01783 160 YDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNRnyDDREYLSYGLSL 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 304 EHKINDNWQYKLNAEYQHVNARLLYAGAWGNIDPVTGDGAMLMGGAYKFRNeqTSLDTSLNGKVDAWGLTHDVVVGASYS 383
Cdd:TIGR01783 240 EYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQDR--VQIDAGLDGEFETGPIEHDLLLGVSYG 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 384 HASEKQYSADLDPalnvPVNVYRWNPHSVPKPSIGTYSSAGPTKTTQK--GLYGMGRIKVIEPVTVIAGLRDSWWDVKTP 461
Cdd:TIGR01783 318 QRTTNRFNNTGYP----SDNIYSLTATSSARTDIGDSPKDRALSSTTKalNGVALQRILLADKWTLTLGGRYDSVDVKSN 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 462 TANFTENGR-----LTPYGGVIWDFNPQWSWYSSYSTVYQPQ----TGKTWSGKMLKPVEGQTLETGVKGAlFNGGLNLS 532
Cdd:TIGR01783 394 NGVAGSTGKrddsqFTPSLGVAYKPTDDWSLYASYAESFKPGgyypKGAGNSGDILEPEKGKNYELGVRYD-LGDSLLAT 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 533 GAIYQIDIKNNPQIDPAHPTggfnnYFISGGKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQGESYN-TLTP 611
Cdd:TIGR01783 473 AALFRITKDNQLVQDPVNGT-----FSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTvPFVP 547
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 612 RHMLRVWSNYDLPWDERKWSLGGGMQAQSAYSTSNGNvTLRQGGYAIFNARLGYQI--DETWTAAVNVNNVFDRRYY--S 687
Cdd:TIGR01783 548 KHTASLWASYAPPVGDNGLTLGGGVQYTGKAYVDGGN-TGKVPSYTVVDLSVRYDLtkKKNLTLALNVNNLFDRDYYtsG 626
                         650       660
                  ....*....|....*....|....*
gi 1423924282 688 GLFSPQWNNRYGDPRNVMFTLKADF 712
Cdd:TIGR01783 627 YRWGPSAYIYPGAPRTVGLSVSYDF 651
PRK10003 PRK10003
ferric-rhodotorulic acid outer membrane transporter; Provisional
19-712 4.75e-121

ferric-rhodotorulic acid outer membrane transporter; Provisional


Pssm-ID: 236640 [Multi-domain]  Cd Length: 729  Bit Score: 378.44  E-value: 4.75e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  19 ALLCATVSWSAMVSAEPVQP-KQDVIQVTAS-----SDMDDDYVAPGVTTLGKMALKPREVAQSVSVIDREQIEKQNLQT 92
Cdd:PRK10003   18 SLLAGCIALALLPSAAFAAPaTEDTVIVEGSatapvDDGEQDYSVKTTSAGTKMQMTQRDIPQSVSIVSQQRMEDQQLQT 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  93 LDDVMQRATGVTSAPYVKLTTAYYVRGFQIDSFEIDGVPALLG---NMASSPQDMAVYERVEILRGSNGLLHGMGNPAAT 169
Cdd:PRK10003   98 LGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFEsrwNLGDALSDTALFERVEVVRGATGLMTGTGNPSAA 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 170 VNMVRKHAPKKNM-AKLSLSAGSWDRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDYFYDVSDQQTRLMYGTVDIDVTPDT 248
Cdd:PRK10003  178 INMVRKHATSREFkGDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIVDADLGDLT 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 249 LLRMGAQFQTIDSVT-NMAGVP-FGKDGSDLHLPRKTYLDVDWDRFKWDTSRSFAGIEHKINDNWQYKLNAEYQHVN--A 324
Cdd:PRK10003  258 TLSAGYEYQRIDVNSpTWGGLPrWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEfdS 337
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 325 RLLYA------------GAWGNIDPvtGDGAMLMGGAYKFRNEQTSLDTSLNGKVDAWGLTHDVVVGASYSHASEKQYSA 392
Cdd:PRK10003  338 KMMYVdayvdkatgmlvGPYSNYGP--GFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSS 415
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 393 DLDPALNVPVNVYRWNpHSVPKPSIGTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWWDVKTPTANfTENGRLT 472
Cdd:PRK10003  416 WANIFPDEIGSFYNFN-GNFPQTDWSPQSLAQDDTTHMKSLYAATRVSLADPLHLILGARYTNWRVDTLTYS-MEKNHTT 493
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 473 PYGGVIWDFNPQWSWYSSYSTVYQPQTGKTWSGKMLKPVEGQTLETGVKGALFNGGLNLSGAIYQIDIKNNPQID--PAH 550
Cdd:PRK10003  494 PYAGLVYDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQSTgtPIP 573
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 551 PTGGFNNYFISGGKVrSQGFELEGIGYLTPFWDVsvgyTYTDTKYRDDSQhQGESYNTLTPRHMLRVWSNYDLPwDERKW 630
Cdd:PRK10003  574 GSNGETAYKAVDGTV-SKGVEFELNGAITDNWQL----TFGATRYIAEDN-EGNAVNPNLPRTTVKLFTRYRLP-VMPEL 646
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 631 SLGGGMQAQ----SAYSTSNGNVTLRQGGYAIFNARLGYQIDETWTAAVNVNNVFDRRYYSGLFSpqwNNRYGDPRNVMF 706
Cdd:PRK10003  647 TVGGGVNWQnrvyTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSVQGNVNNLFDKTYDTNVEG---SIVYGAPRNFSI 723

                  ....*.
gi 1423924282 707 TLKADF 712
Cdd:PRK10003  724 TATYQF 729
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
76-712 2.97e-108

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 342.12  E-value: 2.97e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  76 SVSVIDREQIEKQNLQTLDDVMQRATGVT-SAPYVKLTTAYYVRGFQIDS--FEIDGVPALLGNMASSPQ----DMAVYE 148
Cdd:cd01347     1 SVSVITAEDIEKQPATSLADLLRRIPGVSvTRGGGGGGSTISIRGFGPDRtlVLVDGLPLASSNYGRGVDlntiPPELIE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 149 RVEILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSW---DRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDYF 225
Cdd:cd01347    81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDGDGT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 226 Y------DVSDQQTRLMYGTVDIDVTPDTLLRMGAQFQTIDSVTNMAGVPFGKDGSDL--HLPRKTYLDVDWDRFKWDTS 297
Cdd:cd01347   161 IdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLggGPSSNTNGDRDWDYRDRYRK 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 298 RSFAGIEHKIND-NWQYKLNAEYQHVNARLLYAGAWGNIDPVTGDGAMlMGGAYKFRNEQTSLDTSLNGKVDAWGLTHDV 376
Cdd:cd01347   241 RASLGLEHDLNDtGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGR-SGYSSERDTTQLGFDAGLNAPFGTGPVAHTL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 377 VVGASYSHASekqysadldpalnvpvnvyrwnphsvpkpsigtyssagpTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWW 456
Cdd:cd01347   320 TLGVEYRREE---------------------------------------LDEKQTALYAQDTIELTDDLTLTLGLRYDHY 360
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 457 DVK------TPTANFTENGRLTPYGGVIWDFNPQWSWYSSYSTVYQPQT------------GKTWSGKMLKPVEGQTLET 518
Cdd:cd01347   361 DQDskdtiaGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSlgelygggshggTAAVGNPNLKPEKSKQYEL 440
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 519 GVKGAlFNGGLNLSGAIYQIDIKNNPQIDPAHPTGGFNNYFISGGKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDD 598
Cdd:cd01347   441 GLKYD-PGDGLTLSAALFRIDIKNEIVSTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRT 519
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 599 SQHQGESYNTLTPRHMLRVWSNYDLPWDerKWSLGGGMQAQSAYS--TSNGNVTLRQGGYAIFNARLGYQIDETWTAAVN 676
Cdd:cd01347   520 DGATTGNRLPGIPKHTANLGLDYELPDE--GLTAGGGVRYRGKQYadTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLG 597
                         650       660       670
                  ....*....|....*....|....*....|....*...
gi 1423924282 677 VNNVFDRRYYS--GLFSPQWNNRYGDPRNVMFTLKADF 712
Cdd:cd01347   598 VNNLFDKDYYTslSVRGSGLYGYYGPGRTYYLSVSYKF 635
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
237-711 3.24e-49

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 179.97  E-value: 3.24e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 237 YGTVDIDVTPDTLLRMGAQFQTIDSVTNMaGVPFGKDGSDLHLPRKTYLDVDWDRFKWDTSRSFAGIEHKINDNWQY--- 313
Cdd:pfam00593   2 WQLSLDLLGDDTLLTLGYDYSRYTDGLDL-GLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWlst 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 314 -KLNAEYQHVNARLLYAGAWGNIdpvtgdgamlmGGAYKFRNEQTSLDTSLNGKVDAWGLTHDVVVGASYSHAsekqysa 392
Cdd:pfam00593  81 lRLGLRYSSLDGDYTSNSSGLSG-----------AGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTA------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 393 dldpalNVPVNVYRWNPHSVPKPSIGTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWWDVK------TPTANFT 466
Cdd:pfam00593 143 ------GLDYRRLDDDAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDgddgngGGDNFSR 216
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 467 ENGRLTPYGGVIWDFNPQWSWYSSYSTVYQ-PQTGKTWSG-------------KMLKPVEGQTLETGVKgaLFNGGLNLS 532
Cdd:pfam00593 217 SYSAFSPRLGLVYKPTDNLSLYASYSRGFRaPSLGELYGSgsgggggavaggnPDLKPETSDNYELGLK--YDDGRLSLS 294
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 533 GAIYQIDIKNNPQIDPAHPT-GGFNNYFISGGKVRSQGFELEGIGYLtpfWDVSV---GYTYTDTKYRDDSQHQGESYNT 608
Cdd:pfam00593 295 LALFYIDIKNLITSDPDGPGlGGTVYTYTNVGKARIRGVELELSGRL---WGLGLsggGYTYTDADDDADADDTGNPLPN 371
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 609 lTPRHMLRVWSNYDLPWDerKWSLGGGMQ--AQSAYSTSNGNVTLRQGGYAIFNARLGYQIDETWTAAVNVNNVFDRRY- 685
Cdd:pfam00593 372 -VPRHTANLGLTYDFPLG--GWGARLGARyvGSGERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYk 448
                         490       500
                  ....*....|....*....|....*..
gi 1423924282 686 -YSGLFSPQWNNRYGDPRNVMFTLKAD 711
Cdd:pfam00593 449 rYYSSGGGNLGGYPGPGRTFYLGLSYK 475
 
Name Accession Description Interval E-value
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
17-712 0e+00

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 659.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  17 PCALLCAT-VSWSAMVSAEPVQPKQ-------DVIQVTASSDMDDDYVAPGVTTLGKMALKPREVAQSVSVIDREQIEKQ 88
Cdd:COG4773     1 AAALLAGSgLAAAAAGALAQAAAAAaaeattlPEVTVTGTAEGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  89 NLQTLDDVMQRATGVTSAPYV-KLTTAYYVRGFQIDSFEIDGVPalLGNMASSPQDMAVYERVEILRGSNGLLHGMGNPA 167
Cdd:COG4773    81 GATTLDDALRNVPGVTVSSYDgGGRDSFSIRGFSIDNYLRDGLP--LGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 168 ATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDYFYDVSDQQTRLMYGTVDIDVTPD 247
Cdd:COG4773   159 GLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDD 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 248 TLLRMGAQFQTIDSVTNMAGVPFgkDGSDLHLPRKTYLDVDWDRFKWDTSRSFAGIEHKINDNWQYKLNAEYQHVNARLL 327
Cdd:COG4773   239 TTLTLGAEYQDDDSTGDRGFLPL--DGTLLDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGR 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 328 YAGAWGNIDPVTGDGAMlMGGAYKFRNEQTSLDTSLNGKVDAWGLTHDVVVGASYSHasekqYSADLDPALNVPVNVYRW 407
Cdd:COG4773   317 SAYAYGAPDAATGTLTR-YASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSR-----YDSDSDSATAGTINIYNP 390
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 408 NPHSVPKPSigTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWWDVKTPTANFT-----ENGRLTPYGGVIWDFN 482
Cdd:COG4773   391 VYGNLPEPD--FDASDTDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGsttsyDDSAFTPRAGLVYDLT 468
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 483 PQWSWYSSYSTVYQPQTGKTWSGKMLKPVEGQTLETGVKGALFNGGLNLSGAIYQIDIKNNPQIDPAHPtggfnNYFISG 562
Cdd:COG4773   469 PGLSLYASYSESFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTDPDNP-----NFYVQV 543
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 563 GKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQGESYNTLTPRHMLRVWSNYDLP-WDERKWSLGGGMQAQSA 641
Cdd:COG4773   544 GEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDADALEGKRLTNVPRHTASLWTTYRFPsGALKGLGLGGGVRYVGE 623
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1423924282 642 YSTSNGNvTLRQGGYAIFNARLGYQIDETWTAAVNVNNVFDRRYYSGLFSPQWNNrYGDPRNVMFTLKADF 712
Cdd:COG4773   624 RYGDAAN-TFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYYASSGSRGYVY-YGAPRNVRLSLSYKF 692
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
65-712 2.15e-145

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 438.54  E-value: 2.15e-145
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  65 KMALKPREVAQSVSVIDREQIEKQNLQTLDDVMQRATGVT-SAPYVKLTTAYYVRGFQ-IDSFEIDGVPAllgnMASSPQ 142
Cdd:COG4774     1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTfGAGEGGNGDSFSIRGFSaSGDIYVDGLRD----PGQYRR 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 143 DMAVYERVEILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGLLNQSGSVrgRFVMAWEDK 222
Cdd:COG4774    77 DTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDDLAY--RLNGMYRDS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 223 DYFYDVSDQQTRLMYGTVDIDVTPDTLLRMGAQFQTIDSVTNmAGVPFGKDGSDLHLPRKTYLDVDWDRFKWDTSRSFAG 302
Cdd:COG4774   155 DSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPD-YGVPAVANGRPVDVDRSTFYGQPDDYSDSETDSATLR 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 303 IEHKINDNWQYKLNAEYQHVNARLLYAGAWGNIDpvTGDgAMLMGGAYKFRNEQTSLDTSLNGKVDAWGLTHDVVVGASY 382
Cdd:COG4774   234 LEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNA--TGT-VTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGVEY 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 383 SHASEKQYSADLDPALNvPVNVYrwNP-HSVPKPSIGTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWWDVKT- 460
Cdd:COG4774   311 SREDSDNARYSGGGTAP-TVNLY--NPvYGAPVTGPTLGGADNDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFDTDYt 387
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 461 -PTANFTENGR----LTPYGGVIWDFNPQWSWYSSYSTVYQPQTG---KTWSGKMLKPVEGQTLETGVKGALFNGGLNLS 532
Cdd:COG4774   388 dRTTGATTSSYddsaFSPRAGLVYKPTPNLSLYASYSTSFNPGGGapsLSNAGQALDPEKSRQYEVGVKWDLLDGRLSLT 467
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 533 GAIYQIDIKNNPQIDPAHPtggfnNYFISGGKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQGESyNTL--T 610
Cdd:COG4774   468 AALFRIEKTNVRTTDPANP-----GVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVG-NRLpnV 541
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 611 PRHMLRVWSNYDLPWDerKWSLGGGMQAQSAYSTSNGNvTLRQGGYAIFNARLGYQIDETWTAAVNVNNVFDRRYYSGLF 690
Cdd:COG4774   542 PRHSASLWTTYDLPLP--GLTLGGGVRYVGSRYADAAN-TVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASAY 618
                         650       660
                  ....*....|....*....|..
gi 1423924282 691 SPQWNNrYGDPRNVMFTLKADF 712
Cdd:COG4774   619 GSGYVT-PGAPRTVLLSASYRF 639
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
72-712 4.52e-142

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 430.68  E-value: 4.52e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  72 EVAQSVSVIDREQIEKQNLQTLDDVMQRATGV--TSAPYVKLTTAYYVRGFQ----IDSFEIDGVPaLLGNMASSPQDMA 145
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVvvGGSGGTTQFGNITIRGFGlevdIDNVYLDGVP-LLSRGNLAIVDPA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 146 VYERVEILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDYF 225
Cdd:TIGR01783  80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSF 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 226 YDVSDQQTRLMYGTVDIDVTPDTLLRMGAQFQTIDSVTNMAGVPFGKDGSDLHLPRKTYLDVDWDR--FKWDTSRSFAGI 303
Cdd:TIGR01783 160 YDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNRnyDDREYLSYGLSL 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 304 EHKINDNWQYKLNAEYQHVNARLLYAGAWGNIDPVTGDGAMLMGGAYKFRNeqTSLDTSLNGKVDAWGLTHDVVVGASYS 383
Cdd:TIGR01783 240 EYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQDR--VQIDAGLDGEFETGPIEHDLLLGVSYG 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 384 HASEKQYSADLDPalnvPVNVYRWNPHSVPKPSIGTYSSAGPTKTTQK--GLYGMGRIKVIEPVTVIAGLRDSWWDVKTP 461
Cdd:TIGR01783 318 QRTTNRFNNTGYP----SDNIYSLTATSSARTDIGDSPKDRALSSTTKalNGVALQRILLADKWTLTLGGRYDSVDVKSN 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 462 TANFTENGR-----LTPYGGVIWDFNPQWSWYSSYSTVYQPQ----TGKTWSGKMLKPVEGQTLETGVKGAlFNGGLNLS 532
Cdd:TIGR01783 394 NGVAGSTGKrddsqFTPSLGVAYKPTDDWSLYASYAESFKPGgyypKGAGNSGDILEPEKGKNYELGVRYD-LGDSLLAT 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 533 GAIYQIDIKNNPQIDPAHPTggfnnYFISGGKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQGESYN-TLTP 611
Cdd:TIGR01783 473 AALFRITKDNQLVQDPVNGT-----FSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTvPFVP 547
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 612 RHMLRVWSNYDLPWDERKWSLGGGMQAQSAYSTSNGNvTLRQGGYAIFNARLGYQI--DETWTAAVNVNNVFDRRYY--S 687
Cdd:TIGR01783 548 KHTASLWASYAPPVGDNGLTLGGGVQYTGKAYVDGGN-TGKVPSYTVVDLSVRYDLtkKKNLTLALNVNNLFDRDYYtsG 626
                         650       660
                  ....*....|....*....|....*
gi 1423924282 688 GLFSPQWNNRYGDPRNVMFTLKADF 712
Cdd:TIGR01783 627 YRWGPSAYIYPGAPRTVGLSVSYDF 651
PRK10003 PRK10003
ferric-rhodotorulic acid outer membrane transporter; Provisional
19-712 4.75e-121

ferric-rhodotorulic acid outer membrane transporter; Provisional


Pssm-ID: 236640 [Multi-domain]  Cd Length: 729  Bit Score: 378.44  E-value: 4.75e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  19 ALLCATVSWSAMVSAEPVQP-KQDVIQVTAS-----SDMDDDYVAPGVTTLGKMALKPREVAQSVSVIDREQIEKQNLQT 92
Cdd:PRK10003   18 SLLAGCIALALLPSAAFAAPaTEDTVIVEGSatapvDDGEQDYSVKTTSAGTKMQMTQRDIPQSVSIVSQQRMEDQQLQT 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  93 LDDVMQRATGVTSAPYVKLTTAYYVRGFQIDSFEIDGVPALLG---NMASSPQDMAVYERVEILRGSNGLLHGMGNPAAT 169
Cdd:PRK10003   98 LGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFEsrwNLGDALSDTALFERVEVVRGATGLMTGTGNPSAA 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 170 VNMVRKHAPKKNM-AKLSLSAGSWDRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDYFYDVSDQQTRLMYGTVDIDVTPDT 248
Cdd:PRK10003  178 INMVRKHATSREFkGDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIVDADLGDLT 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 249 LLRMGAQFQTIDSVT-NMAGVP-FGKDGSDLHLPRKTYLDVDWDRFKWDTSRSFAGIEHKINDNWQYKLNAEYQHVN--A 324
Cdd:PRK10003  258 TLSAGYEYQRIDVNSpTWGGLPrWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEfdS 337
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 325 RLLYA------------GAWGNIDPvtGDGAMLMGGAYKFRNEQTSLDTSLNGKVDAWGLTHDVVVGASYSHASEKQYSA 392
Cdd:PRK10003  338 KMMYVdayvdkatgmlvGPYSNYGP--GFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSS 415
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 393 DLDPALNVPVNVYRWNpHSVPKPSIGTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWWDVKTPTANfTENGRLT 472
Cdd:PRK10003  416 WANIFPDEIGSFYNFN-GNFPQTDWSPQSLAQDDTTHMKSLYAATRVSLADPLHLILGARYTNWRVDTLTYS-MEKNHTT 493
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 473 PYGGVIWDFNPQWSWYSSYSTVYQPQTGKTWSGKMLKPVEGQTLETGVKGALFNGGLNLSGAIYQIDIKNNPQID--PAH 550
Cdd:PRK10003  494 PYAGLVYDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQSTgtPIP 573
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 551 PTGGFNNYFISGGKVrSQGFELEGIGYLTPFWDVsvgyTYTDTKYRDDSQhQGESYNTLTPRHMLRVWSNYDLPwDERKW 630
Cdd:PRK10003  574 GSNGETAYKAVDGTV-SKGVEFELNGAITDNWQL----TFGATRYIAEDN-EGNAVNPNLPRTTVKLFTRYRLP-VMPEL 646
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 631 SLGGGMQAQ----SAYSTSNGNVTLRQGGYAIFNARLGYQIDETWTAAVNVNNVFDRRYYSGLFSpqwNNRYGDPRNVMF 706
Cdd:PRK10003  647 TVGGGVNWQnrvyTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSVQGNVNNLFDKTYDTNVEG---SIVYGAPRNFSI 723

                  ....*.
gi 1423924282 707 TLKADF 712
Cdd:PRK10003  724 TATYQF 729
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
76-712 2.97e-108

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 342.12  E-value: 2.97e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  76 SVSVIDREQIEKQNLQTLDDVMQRATGVT-SAPYVKLTTAYYVRGFQIDS--FEIDGVPALLGNMASSPQ----DMAVYE 148
Cdd:cd01347     1 SVSVITAEDIEKQPATSLADLLRRIPGVSvTRGGGGGGSTISIRGFGPDRtlVLVDGLPLASSNYGRGVDlntiPPELIE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 149 RVEILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSW---DRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDYF 225
Cdd:cd01347    81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDGDGT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 226 Y------DVSDQQTRLMYGTVDIDVTPDTLLRMGAQFQTIDSVTNMAGVPFGKDGSDL--HLPRKTYLDVDWDRFKWDTS 297
Cdd:cd01347   161 IdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLggGPSSNTNGDRDWDYRDRYRK 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 298 RSFAGIEHKIND-NWQYKLNAEYQHVNARLLYAGAWGNIDPVTGDGAMlMGGAYKFRNEQTSLDTSLNGKVDAWGLTHDV 376
Cdd:cd01347   241 RASLGLEHDLNDtGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGR-SGYSSERDTTQLGFDAGLNAPFGTGPVAHTL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 377 VVGASYSHASekqysadldpalnvpvnvyrwnphsvpkpsigtyssagpTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWW 456
Cdd:cd01347   320 TLGVEYRREE---------------------------------------LDEKQTALYAQDTIELTDDLTLTLGLRYDHY 360
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 457 DVK------TPTANFTENGRLTPYGGVIWDFNPQWSWYSSYSTVYQPQT------------GKTWSGKMLKPVEGQTLET 518
Cdd:cd01347   361 DQDskdtiaGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSlgelygggshggTAAVGNPNLKPEKSKQYEL 440
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 519 GVKGAlFNGGLNLSGAIYQIDIKNNPQIDPAHPTGGFNNYFISGGKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDD 598
Cdd:cd01347   441 GLKYD-PGDGLTLSAALFRIDIKNEIVSTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRT 519
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 599 SQHQGESYNTLTPRHMLRVWSNYDLPWDerKWSLGGGMQAQSAYS--TSNGNVTLRQGGYAIFNARLGYQIDETWTAAVN 676
Cdd:cd01347   520 DGATTGNRLPGIPKHTANLGLDYELPDE--GLTAGGGVRYRGKQYadTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLG 597
                         650       660       670
                  ....*....|....*....|....*....|....*...
gi 1423924282 677 VNNVFDRRYYS--GLFSPQWNNRYGDPRNVMFTLKADF 712
Cdd:cd01347   598 VNNLFDKDYYTslSVRGSGLYGYYGPGRTYYLSVSYKF 635
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
65-698 2.87e-92

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 300.59  E-value: 2.87e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  65 KMALKPREVAQSVSVIDREQIEKQNLQTLDDVMQRATGVTSAPYVKLTTAYYVRGFQIDS----FEIDGVP---ALLGNM 137
Cdd:COG1629    10 RTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFGGGGnrvlVLVDGVPlndPSGGDG 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 138 ASSPQDMAVYERVEILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGllnQSGSVRGRFVM 217
Cdd:COG1629    90 GLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLSG---GNGKLAYRLSA 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 218 AWEDKDYFYDVSDQQTRLMYGTVDIDVTPDTLLRMGAQFQtiDSVTNMAGVPFGKDGSDLHLPRKTYLDVDWDRFKWDTS 297
Cdd:COG1629   167 SYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYS--DSDQDSPGYLTLAALRPRGAMDDGTNPYSNDTDDNTRD 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 298 RSFAGIEHK-INDNWQYKLNAEYQHVNARLlyagaWGNIDPVTGDGAMLmgGAYKFRNEQTSLDTSLNGKVDaWGLTHDV 376
Cdd:COG1629   245 RYSLSLEYEhLGDGLKLSASAYYRYDDTDL-----DSDFTPTPADGGTL--EQTDFDNRTYGLELRLTYDLG-FGGKHTL 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 377 VVGASYSHASEKQYSADLDPALNVPVNVyrwnphsvpkpsigTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWW 456
Cdd:COG1629   317 LVGLDYQRQDLDGSGYPLDLGSGSLPTL--------------TSGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYV 382
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 457 DVK-------TPTANFTENG-RLTPYGGVIWDFNPQWSWYSSYSTVYQPQT----------GKTWSGKMLKPVEGQTLET 518
Cdd:COG1629   383 SYDvddtvtgTDSASGSRSYsAFSPSLGLTYQLSPNLSLYASYSRGFRAPTfgelyangtdPYSVGNPDLKPETSTNYEL 462
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 519 GVKGALFNGGLNLSGAIYQIDIKNNPQIDPAHPTGGFNNYFISGGKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDD 598
Cdd:COG1629   463 GLRYRLLDGRLSLSLALFYSDVDNEILSVPLPNDSGFSTYYTNAGKARSYGVELELSYQLTPGLSLNASYSYTDAKFDDD 542
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 599 SQHQGESYNTL---TPRHMLRVWSNYDLPwdeRKWSLGGGMQAQSAYSTSNGNVTLRQGGYAIFNARLGYQIDETWTAAV 675
Cdd:COG1629   543 TDGSADLDGNRlpgVPPLTANLGLTYEFP---GGWSLGLGVRYVGDRYLDDANTQGAPGGYTLVDLGAGYRFGDNLTLSL 619
                         650       660
                  ....*....|....*....|...
gi 1423924282 676 NVNNVFDRRYYSGLFSPQWNNRY 698
Cdd:COG1629   620 GVDNLFDKKYATSLSVRASNVRG 642
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
23-712 8.04e-65

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 227.50  E-value: 8.04e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  23 ATVSWSAMVSAEPVQPKQDVIQVTASSDMDDDyvapgvttlgkmalkPREVAQSVSVIDREQIEKQNLQTLDDVMQRATG 102
Cdd:COG4772     6 AAALLLAAAAAAEAATTLETVVVTGSRAAEAR---------------LKDVPGSVSVVDREELENQAATSLREVLRRVPG 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 103 VtsapYVKLTTAY------YVRGFQID-SFEI----DGVPAllgNMA--SSPQ-----DMAVYERVEILRGSNGLLHGmg 164
Cdd:COG4772    71 V----NVQEEDGFglrpniGIRGLGPRrSRGItlleDGIPI---APApyGDPAayyfpDLERMERIEVLRGAAALRYG-- 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 165 nPAAT---VNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGllnQSGSVRGRFVMAWEDKDYFYDVSDQQTRLMYGTVD 241
Cdd:COG4772   142 -PQTVggaINFVTRTIPTAFGGELRVTGGSFGYRRTHASVGG---TVGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLG 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 242 IDVTPDTLLRmgAQFQTIDSVTNMAG----VPFGKDgsdlhlPRKTYLDVDWdrFKWDTSRSFAGIEHKINDNWQYKLNA 317
Cdd:COG4772   218 YRLSDRQELT--LKFQYYDEDANTPGgltdAQFDAD------PRQSYRPADQ--FDTRRTQLSLRYEHQLSDNTTLTTTA 287
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 318 EYqhvNARLLYAGAWGNIDPVTGDGAMLMGGAYKFRNEqtSLDTSLNGKVDAWGLTHDVVVGASYSHASEKQysadldpa 397
Cdd:COG4772   288 YY---NDFSRNWYIRQNTADPNTPGLGLRGNPRGYRSY--GIEPRLTHRFELGGVPHTLEVGLRYHREEEDR-------- 354
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 398 lNVPVNVYRWnphsVPKPSIGTYSSAGPTKTTqkGLYGMGRIKVIEPVTVIAGLR--------DSWWDVKTPTANFTENG 469
Cdd:COG4772   355 -KQYVNTYGQ----GRSGAGLRRDRRFSADAL--AAYAQNRFELTGRLTLTPGLRyehirrdrTDRYSTRTGGDDSGSNS 427
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 470 R--LTPYGGVIWDFNPQWSWYSSYSTVYQPQT-----GKTWSGKMLKPVEGQTLETGVKGALfNGGLNLSGAIYQIDIKN 542
Cdd:COG4772   428 YseFLPGLGLLYQLTDNLQLYANVSRGFEPPTfgdlaYGNGGNPDLKPEKSWNYELGTRGRI-GNGLSAEVALFYIDYDN 506
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 543 npQIDPAHPTGGFNNYFISGGKVRSQGFELEGIGYLTPF----WDVSVGYTYTDTKYRDDSqhqGESY--NTL--TPRHM 614
Cdd:COG4772   507 --ELGSCSAAGGDRSTFTNAGETRHQGLELALDYDLLKGgglgLPLFAAYTYTDAEFTSDF---GPVFagNRLpyVPRHQ 581
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 615 LRVWSNYDLpwdeRKWSLGGGMQAQSAYSTSNGNvTLRQG------GYAIFNARLGYQIDETWTAAVNVNNVFDRRYYSG 688
Cdd:COG4772   582 LTAGLGYEH----GGWTANLNGRYVSEQFTDAAN-TVADGsfgkipSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIAS 656
                         730       740
                  ....*....|....*....|....*
gi 1423924282 689 LFSPQWNNRY-GDPRNVMFTLKADF 712
Cdd:COG4772   657 RAPNYAAGIRpGPPRTVYAGLRLKF 681
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
20-672 3.67e-56

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 202.39  E-value: 3.67e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  20 LLCATVSWSAMVSAEPVQPKQ------DVIQVTASsdmdddyvapgvttlgKMALKPREVAQSVSVIDREQIEKQNLQTL 93
Cdd:COG4771     1 LLLASLLLLLALAAQAADALAedatelEEVVVTAT----------------RTEQSLSDAPASVSVITAEEIEKLGATDL 64
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  94 DDVMQRATGV--TSAPYVKLTTAYYVRGFQID--SFEIDGVP----ALLGNMASSPQDMAVYERVEILRGSNGLLHGMGN 165
Cdd:COG4771    65 ADALRLLPGVsvTRSGGRGGSSGISIRGLGGDrvLVLIDGVPvnnpALGGGGDLSYIPPDDIERIEVIRGPASALYGSDA 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 166 PAATVNMVRKHAPKKNMAKLSLSAGSWDR--YRGEVDVGGllnQSGSVRGRFVMAWEDKDYFYDV--------SDQQTRL 235
Cdd:COG4771   145 IGGVINIITKKPTDELEGSVSLGYGSNGNgtYSGSLSLGG---PGDKLSFLLSGSYRDRDGYLDYrnggfvgnSGYERYN 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 236 MYGTVDIDVTPDTLLRMGAQFQTIDSVTNMAGVPFGKDGSDLHLPRktylDVDWDRFKWDtsrsfAGIEHKINDNWQYKL 315
Cdd:COG4771   222 LNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDR----DTTTDRGNYS-----LRYNGDLGDNLDLSL 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 316 NAEYQhvnarllyagawgNIDPVTGDGAMLMGGAYKFRNEQTSLDTSLNGKvdaWGLTHDVVVGASYSHasekqysADLD 395
Cdd:COG4771   293 YYSRT-------------DRDSTNGSLGGSTGSFSDSDDTTYGLELDLTYP---LGGNHTLTLGAEYRY-------DDLD 349
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 396 PalnvpvnvyrwnphsvpkpsiGTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWWDVKTPTANFTENGRLtpyg 475
Cdd:COG4771   350 S---------------------SSFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGASNYTAFSPRL---- 404
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 476 GVIWDFNPQWSWYSSYSTVYQP----QTGKTWSGKM---------LKPVEGQTLETGVKGALFNGGLNLSGAIYQIDIKN 542
Cdd:COG4771   405 GLRYDLSDNLTLRASYGRGFRApslaELYGSGTGTPgryvlgnpdLKPETSDNYELGLEYRLGNGGLSLSLTGFYTDIKD 484
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 543 NPQIDPAHPTGGFNNYFISGGKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQgesYNTLTPRHMLRVWSNYD 622
Cdd:COG4771   485 LIVLVPVGPGPGDVLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDDGDTGE---PLPNVPPHKANLGLDYR 561
                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|
gi 1423924282 623 LPwDERKWSLGGGMQAQSAYSTSNGNVTLRQGGYAIFNARLGYQIDETWT 672
Cdd:COG4771   562 LP-KWWLLLLLTRYYGGRYVTPPSGRLEGYTPGYTLLDLRASYKLTKNLT 610
PRK14050 PRK14050
TonB-dependent siderophore receptor;
53-708 1.99e-52

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 193.86  E-value: 1.99e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  53 DDYVAPGVTTLGKMALKPREVAQSVSVIDREQIEKQNL-QTLDDVMQRATGVTSAPYVKL--TTAYYVRGF---QIDSFe 126
Cdd:PRK14050   59 DGYVAKATATGSKTDTPITEIPQSVSVVGRQEMDDRGVtNKVDEALRYTPGVLSQPFGTDgdTDWFYIRGFdatQTGVF- 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 127 IDGVPALLGNMASSPQDMAVYERVEILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGLLN 206
Cdd:PRK14050  138 LDGLNLFSYGFGGFQIDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTGFDVGDKLS 217
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 207 QSGSVRGRFVMAWEDKDYFYDVSDQqtrlMYGTV--DIDVTPD--TLLRMGAQFQTIDSVTNMAG----------VPFGK 272
Cdd:PRK14050  218 DDGTVRYRVTGKVAGGDNYSDYSED----LRGFImpQITYAPDdaTSLTVYGYLSGLDQVHVGNGflpyvgtvvdAPFGK 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 273 dgsdlhLPRKTYL-DVDWDRFKWDTSRSFAGIEHKINDNWQYKLNAEYQHVNAR--LLYAGAW-----GNIDPVTGDgAM 344
Cdd:PRK14050  294 ------IDRDAFYgEPDIDNGSYAQQMLGYEFSHEFDNGWTFSQNARYGHLHKHekGPYTYGYvggatGLPDPTGPD-YM 366
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 345 LMGGAYKFRNE--QTSLDTSLNGKVDAWGLTHDVVVGASYSHASEKQYSADLDPalnvpvnvyrwNPHSVPKPSIGTysS 422
Cdd:PRK14050  367 LNRIGFEHRSKvdSFSIDNRLEGEFDTGALTHNLLFGLDYKYYRLDQVQACCGA-----------TPISATNPVYGT--T 433
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 423 AGPT--------KTTQKGLYGMGRIKVIEPVTVIAGLR----DSWWDVKTPTANFTENGRLTPYGGVIWDFNPQWSWYSS 490
Cdd:PRK14050  434 QGANfvyldqilTQQQIGIYAQDQIRFGDGWLVTLNGRydyvDTDSDARIGTSYESNDGALSGRAGLAYEFDNGLTPYVS 513
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 491 YSTVYQPQTGKTWSGKMLKPVEGQTLETGVK--GALFNGGLNLSgaIYQIDIKNNPQIDPAhptggfnnYFISG--GKVR 566
Cdd:PRK14050  514 AATFFNPLVGTLASGPPLKPEEGEQYEAGIKyePSFIDGLITAS--VFQITKKNVTVTDPL--------TFASTqlGEVR 583
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 567 SQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQ--GESyNTLTPRHMLRVWSNYDLPWDE-RKWSLGGGMQAQSAYS 643
Cdd:PRK14050  584 SRGFELEGKVNLDDNWKALASFTYTDLEITEDANPSliGNS-PYLVPETQASLWLDYAVTDGAfEGVSLGAGVRYQGESW 662
                         650       660       670       680       690       700
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1423924282 644 TSNGNvTLRQGGYAIFNARLGYQIDEtWTAAVNVNNVFDRRYYSGLFSPQWNNrYGDPRNVMFTL 708
Cdd:PRK14050  663 ADEAN-TLKVPAATLFDAAIRYEKND-WGASLNVANLFDKEYVAGCQGLLVCG-YGESRTITLKL 724
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
237-711 3.24e-49

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 179.97  E-value: 3.24e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 237 YGTVDIDVTPDTLLRMGAQFQTIDSVTNMaGVPFGKDGSDLHLPRKTYLDVDWDRFKWDTSRSFAGIEHKINDNWQY--- 313
Cdd:pfam00593   2 WQLSLDLLGDDTLLTLGYDYSRYTDGLDL-GLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWlst 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 314 -KLNAEYQHVNARLLYAGAWGNIdpvtgdgamlmGGAYKFRNEQTSLDTSLNGKVDAWGLTHDVVVGASYSHAsekqysa 392
Cdd:pfam00593  81 lRLGLRYSSLDGDYTSNSSGLSG-----------AGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTA------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 393 dldpalNVPVNVYRWNPHSVPKPSIGTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLRDSWWDVK------TPTANFT 466
Cdd:pfam00593 143 ------GLDYRRLDDDAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDgddgngGGDNFSR 216
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 467 ENGRLTPYGGVIWDFNPQWSWYSSYSTVYQ-PQTGKTWSG-------------KMLKPVEGQTLETGVKgaLFNGGLNLS 532
Cdd:pfam00593 217 SYSAFSPRLGLVYKPTDNLSLYASYSRGFRaPSLGELYGSgsgggggavaggnPDLKPETSDNYELGLK--YDDGRLSLS 294
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 533 GAIYQIDIKNNPQIDPAHPT-GGFNNYFISGGKVRSQGFELEGIGYLtpfWDVSV---GYTYTDTKYRDDSQHQGESYNT 608
Cdd:pfam00593 295 LALFYIDIKNLITSDPDGPGlGGTVYTYTNVGKARIRGVELELSGRL---WGLGLsggGYTYTDADDDADADDTGNPLPN 371
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 609 lTPRHMLRVWSNYDLPWDerKWSLGGGMQ--AQSAYSTSNGNVTLRQGGYAIFNARLGYQIDETWTAAVNVNNVFDRRY- 685
Cdd:pfam00593 372 -VPRHTANLGLTYDFPLG--GWGARLGARyvGSGERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYk 448
                         490       500
                  ....*....|....*....|....*..
gi 1423924282 686 -YSGLFSPQWNNRYGDPRNVMFTLKAD 711
Cdd:pfam00593 449 rYYSSGGGNLGGYPGPGRTFYLGLSYK 475
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
13-691 7.34e-48

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 180.34  E-value: 7.34e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  13 FRLTPCALLCATVSWSAMVSAE-PVQPKQDVIQVTASSDMDDDYVAPGVTTLGK---MALKP----REVAQSVSVIDREQ 84
Cdd:PRK10044   11 HSLRKIAVVVATAVSGMSVYAQaAVEPKEETITVTAAPAPQESAWGPAATIAAKrsaTGTKTdtpiEKTPQSISVVTAEE 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  85 IEKQNLQTLDDVMQRATGVTSAPYVKLTTAYYV--RGFQIDSFE----IDGVpALLGNMASSPQ-DMAVYERVEILRGSN 157
Cdd:PRK10044   91 MALHQPKSVKEALSYTPGVSVGTRGASNTYDHLiiRGFAASGQSqnnyLDGL-KLQGNFYNDAViDPYMLERAELMRGPV 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 158 GLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGLLNQSGSVRGRFV-MAW---------EDKDY--- 224
Cdd:PRK10044  170 SVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTgLARsanaqqkgsEEQRYaia 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 225 --FYDVSDQQTRLMYGTVDIDvTPDT-----LLRMGaqfqTIDSVTNMAGVP--FGKDGSDLHLPRKTYLdvdwdrfkwd 295
Cdd:PRK10044  250 psFTWRPDDKTNFTFLSYFQN-EPETgyygwLPKEG----TVEPLPNGKRLPtdFNEGAKNNTYSRNEKM---------- 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 296 TSRSFagiEHKINDNWQYKLNAEYQHVnaRLLYAGAWGNidPVTGDGAMLMGGAYKFRNE---QTSLDTSLNGKVDAWGL 372
Cdd:PRK10044  315 VGYSF---DHEFNDTFTVRQNLRYAEN--KTSQRSVYGY--GVCSDKGHYLNRGYVVDDEklqNFSVDTQLQSKFATGDV 387
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 373 THDVVVGASYSHA-SEKQYSADLDPALNvPVNVYrwNPhsvPKPSIGTYSSAGP----TKTTQKGLYGMGRIKVIEPVTV 447
Cdd:PRK10044  388 DHTLLTGVDFMRMrNDINAWFGYADSVP-LLNLY--GP---VNTDFDFNANSGPyqilNKQKQTGLYVQDQAEWDKWLVT 461
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 448 IAGlRDSWWDVKTPTANF-----TENGRLTPYGGVIWDFNPQWSWYSSYSTVYQPQTGKTWSGKMLKPVEGQTLETGVKG 522
Cdd:PRK10044  462 LGG-RYDWADQSSLNRVNgttdkRDDKQFTWRGGVNYLFDNGITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKY 540
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 523 ALFNGGLNLSGAIYQIDIKNNPQIDPAHPTggfnnYFISGGKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQ 602
Cdd:PRK10044  541 VPKDRPIVVTGAVYQLTKTNNLTADPENSF-----FSVQGGEIRARGVELEAKAALSANVNVTGSYTYTDAEYTTDTTYK 615
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 603 GesyNT--LTPRHMLRVWSNYDLpwDERKWS---LGGGMQaQSAYSTSNGNVTLRQGGYAIFNARLGYQIDETWTA---- 673
Cdd:PRK10044  616 G---NTpaQVPKHMASLWADYTF--FDGPLSgltLGTGGR-YTGSSYGDPANSFKVGSYTVVDALVKYDLARFGMAgssv 689
                         730
                  ....*....|....*...
gi 1423924282 674 AVNVNNVFDRRYYSGLFS 691
Cdd:PRK10044  690 ALNVNNLFDREYVASCFN 707
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
1-707 6.17e-40

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 157.28  E-value: 6.17e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282   1 MLSVYNIKSRGIFRLTPCALLCATVSWSAMVSAEPVQPKQDVIQVTASSDmDDDYvAPGVTTLGKMALKPREVAQSVSVI 80
Cdd:PRK09840    1 MENNRNFPARQFHSLAFFAGLCIGITPVAQALAAEGQTNADDTLVVEAST-PSLY-APDQSADPKFSQPLADTTQTITVI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  81 DREQIEKQNLQTLDDVMQRATGVtSAPYV----KLTT--AYYVRGFQI-DSFEIDGVPALlgnmASSPQDMAVYERVEIL 153
Cdd:PRK09840   79 SEQVIKDQGATNLTEALRNVPGV-GTFFAgengNTTTgdAIYMRGFDTsNSIYVDGIRDI----GSISRDTFNTEQVEVI 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 154 RGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGLLNQSGSVR-----------GRFVMawEDK 222
Cdd:PRK09840  154 KGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRlnvmgekthdaGRDKV--KNE 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 223 DYFYDVS-----DQQTRLM--YGTVDIDVTPDtllrmgaqfqtidsvtnmAGVP-FGKDGSDLHLPRKTYLD-------- 286
Cdd:PRK09840  232 RYGVAPSvafglGTANRLYlnYLHVTQNNTPD------------------GGIPtIGLPGYSAPSAGRAALNhagkvdth 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 287 ----VDWDRFKWDTSRSFAGIEHKINDNWQYKLNAEYQHVNARLLYAGAWGNI---------DPVTGDGAMLMGgAYKFR 353
Cdd:PRK09840  294 nfygTDSDYDDSTTDTATMRFEHDINDNTTLRNTTRWSRVKQDYLLTAIMGGAsnittptpsDVNTWTWSRTAN-TKDVS 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 354 NEQTSLDTSLNGKVDAWGLTHDVVVGASYShaSEKQYSADLDPALNVPVNVYrwnpHSVPKPSIGTYS-----SAGPTKT 428
Cdd:PRK09840  373 NKILTNQTNLTSTFYTGSIGHDVSTGVEFT--RETQTNYGVNPVTLPAVNLY----HPDSSIHPGGLTrnganANGQTDT 446
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 429 TqkGLYGMGRIKVIEPVTVIAGLRDSWWDVK------------------------TPTANFTEN--GRLTPY-GGVIWDF 481
Cdd:PRK09840  447 F--AIYAFDTLQLTRDWELNGGIRLDNYHTEydsatacggsgrgaitcpagvakgSPVTTVDTAksGNLVNWkAGALYKL 524
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 482 NPQWSWYSSYSTVYQPQTGKTW----SGKM-------LKPVEGQTLETGVKGALFNGGLNLSGAIYQIDIKNNPQIDPah 550
Cdd:PRK09840  525 TENGNVYINYAVSQQPPGGSNFalaqSGSGnsanrtdFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQND-- 602
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 551 pTGGFNNYfisgGKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRD--DSQHQGESYNTLTPRHMLRVWSNYDLPWDer 628
Cdd:PRK09840  603 -DGTYSQY----GKKRVEGYELSVAGNITPAWQVIAGYTQQKATVKNgkDVAQDGSSSLPYTPEHAFTLWSQYQATDD-- 675
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 629 kWSLGGGMQ-AQSAYSTSNGNVTLRQ--GGYAIFNARLGYQIDETWTAAVNVNNVFDRRYYSGLFSPQWNNRYGDPRNVM 705
Cdd:PRK09840  676 -LSVGGGARyIGSMHRGSDGAVGTPAftEGYWVADAKLGYRVNRNLDLQLNVYNLFDTDYVASINKSGYRYHPGEPRTFL 754

                  ..
gi 1423924282 706 FT 707
Cdd:PRK09840  755 LT 756
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
41-684 1.27e-38

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 153.13  E-value: 1.27e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  41 DVIQVTASSD---MDDDYVAPGVTTLGKMALKPREVAQSVSVIDREQIEKQNLQTLDDVMQRATG--VTSAPYVKLTTAY 115
Cdd:PRK14049   44 ETLVVNGGSGgviTADGYVATSSATGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGarVGAFGFDPRFDAF 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 116 YVRGFQI-------DSFEIDGVPALLgnMASSPQDMavyERVEILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLS 188
Cdd:PRK14049  124 FVRGFDVtytgvfrDNLRQPGASSSI--FKTEPYGL---EGVSILRGPSSALYGASGAGGLFNLITKRPTEEPLREVQVQ 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 189 AGSWDRYRGEVDVGGLLNQSGSVRGRFVMAWEDKDY-FYDVSDQQtrlMYGTVDIDVTPD--TLLRMGAQFqtidSVTNM 265
Cdd:PRK14049  199 YGTNNRYQGQFDFSGPVNETDPVYYRLTGLLRDADTeQVGVPDDR---AYIAPAFTWKPDedTRLTVLGEY----SRTKT 271
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 266 AGV------PFGKDGSDLHLPrktylDVDWDRFKWDTSRSFAGIEHKINDNWQYKLNAEYQHVNARLLYAGAW--GNIDP 337
Cdd:PRK14049  272 GGTaayyndPLTGEVTDIFAG-----NPAFNDSVQKQGRIGYEFEHRLNDTFVFRQNARVSTLNIDADWAFAYapNAADP 346
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 338 VTGDGAmlmGGAYKFRNEQTSLDTSLNGKVDAWGLTHDVVVGASYShasEKQYSAdLDPALNVPVNVYRWNPHSVPKPSI 417
Cdd:PRK14049  347 TLLDSS---AGTYDERLTAFVIDNQLEAKFDTGAFEHTLLAGVDYT---KLRFRA-LNGRGVSPPLDTKNPTQGRPVAAI 419
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 418 gTYSSAGPTKTTQKGLYGMGRIKViEPVTVIAGLRDSWWDVKTPTANFTEN-------------GRLTPYGGVIWDFNPq 484
Cdd:PRK14049  420 -DFSTRTVQDQWQLGTYLQDQIRY-DAWTLTAGGRYDWVSTDTDTTDLATDslttvsqkdkefsGRIGLTYETDFGLAP- 496
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 485 wswYSSYSTVYQPQTG-KTWSGKMLKPVEGQTLETGVKGALFNGGLNLSGAIYQIDIKNNPQIDPAHPTGGFNNYFISGG 563
Cdd:PRK14049  497 ---YISYSTAFSPNAGfNRATNQPFKPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLYYEVVFLAAGPTNIQVQRG 573
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 564 KVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRDDSQHQGESYNTLTPRHMLRVWSNYDLPWDERKWSLGGGMQAQ-SAY 642
Cdd:PRK14049  574 KLRSRGFELEANTSLDNGLSLIASYTYTDVKIIQGPEGTIGNEVSSVPNHMASAWAHYTLPEGGPLYGLGLGAGARfVGS 653
                         650       660       670       680
                  ....*....|....*....|....*....|....*....|....*...
gi 1423924282 643 STSNGNVTLRQGGYAIFNARLGYQ---IDETWTA---AVNVNNVFDRR 684
Cdd:PRK14049  654 SYGNDQNTFKNSSRVLFDASVGYDfaaIDKKYEGlmlQVNATNLFDRR 701
TonB-hemlactrns TIGR01786
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ...
41-712 9.50e-22

TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273808 [Multi-domain]  Cd Length: 715  Bit Score: 100.56  E-value: 9.50e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  41 DVIQVTASSDMDDDYVAPgvttlgkmalkpREVAQSVSVIDREQIEKQNLQTLDDVMQRATGVTSAPYVKL-TTAYYVRG 119
Cdd:TIGR01786   1 DTITVTATRTADPQRRDL------------SVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVEGGRGgSQGINIRG 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 120 FQID--SFEIDGVP-------ALLGNMASSPQDMAVYERVEILRGSNGLLHGMGNPAATVNMVRKHAPkknmaklslsag 190
Cdd:TIGR01786  69 LDKNrvAVLVDGIRqntsyggQGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAA------------ 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 191 swDRYRGEVDVGGLLN-----------QSGSVRGRFVMAweDKDYFYDVSDQ-------QTRLMYGTVDIDVTPDT---- 248
Cdd:TIGR01786 137 --DLLKPGKDLGGLSKlgyssannrftQSVAAAGRNDDV--DALVQATYRRGhelkngnKANIGNESKRSKPNPSDyksq 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 249 --LLRMGAQFqTIDSVTNMAGVPF---GKDGSDLHLPRKTYLDVDWDRFKWdtSRSFAGIEHKINDNWQYKLNAEYQHVN 323
Cdd:TIGR01786 213 sfLAKLGWQL-NDAHRLGLSLEYTqtdYDEPEMTNTSYLTKPLGAPLLSST--VVLGDSKTRDRRTGLDYELNPDNSWLD 289
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 324 ARLLYAgAWGNIDPVTGDGAMLMGGAYKF----RNEQTSLDTSLNGKVDAW----GLTHDVVVGASYsHASEKQYSADLD 395
Cdd:TIGR01786 290 TVKLAL-DKQYIQLYNYLNATSASDYPGVdkngRYKDKYDYYTLGFDTNNKiefsVHSLSLTYGLDR-FKDKVSTGDSRR 367
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 396 PALNVPVNVYRWNPhsvpkpsigtysSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLR--------DSWWDVKTPTANFTE 467
Cdd:TIGR01786 368 NLPTAAYNLYGYEG------------ENRPVKGSNFGLFLQDNIKLGDWLSLSAGLRydhyktdpKADESKDYGAISKTY 435
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 468 NgRLTPYGGVIWDFNPQWSWYSSYSTVYQPQ-------TGKTWSGKM--------LKPVEGQTLETGVKgaLFNGGLNLS 532
Cdd:TIGR01786 436 S-RWSPSLGLTYKPTPWLTLYYSYSQGFRAPsfdelygTGAHPGGGPytflpnpnLKPETSKNWEIGIN--LHFDQLDFK 512
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 533 GAIYQIDIKN-------NPQIDPAHPTGGFNNY-FISGGKVRSQGFELEG------IGYLTPFWDVSVGYTYTDTKYRDD 598
Cdd:TIGR01786 513 VSYFRNDYKDfidlgigVTAKGNMAQVGSNTITnYVNIDNARIRGIELSGrydlgsFFSGPDGWTTTLKYGYTKGKDSDT 592
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 599 sqhqGESYNTLTPRHMLrVWSNYDLPwdERKWSLGGGMQAQSAYSTSN------------GNVTLRQGGYAIFNARLGYQ 666
Cdd:TIGR01786 593 ----NPWLNAITPLKVV-LGLGYDHP--DEKWGVGLTLTFSGAKDAVDayatyyengeaaKAGPLRTPSYTVVDLYGYYK 665
                         730       740       750       760       770
                  ....*....|....*....|....*....|....*....|....*....|
gi 1423924282 667 IDETWTAAVNVNNVFDRRYY---SGLFSPQWNNRYGDP-RNVMFTLKADF 712
Cdd:TIGR01786 666 PNKNLTLRFGVYNLLDRKYTtweSARQAGPLATGYTAPgRNYKASVEYKF 715
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
65-330 3.43e-18

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 85.31  E-value: 3.43e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  65 KMALKPREVAQSVSVIDREQIEKQNLQTLDDVMQRATGVTSAPY--VKLTTAYYVRGFQIDSFE--IDGVP---ALLGNM 137
Cdd:COG4206     7 RLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSggPGSAASISIRGLGSNQTLvlIDGVPlndPSLGGV 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 138 ASSPQDMAVYERVEILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSAGSWDRYRGEVDVGGllnQSGSVRGRFVM 217
Cdd:COG4206    87 DLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSG---GAGKFSYSLSA 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 218 AWEDKDYF-------YDVSDQQTRLMYGTVDIDVTPDTLLRMGAQFQtiDSVTNMAGVPFGKDGSDLhlprktYLDVDWD 290
Cdd:COG4206   164 SYRRSDGYryndpdlRNNDGYENTSLNARLGYKLGDNGSLSLSGGYS--DSERGYPGAVGSDRNLRL------SLSLEYK 235
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1423924282 291 RFKWDTSRSFAGIEHKINDNWQYKLNAEYQHVNARLLYAG 330
Cdd:COG4206   236 LSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLS 275
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
69-169 9.32e-18

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 79.24  E-value: 9.32e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  69 KPREVAQSVSVIDREQIEKQNLQTLDDVMQRATGVT-SAPYVKLTTAYYVRGF--QIDSFEIDGVP---ALLGNMASSPQ 142
Cdd:pfam07715   1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSvSSGGGGGGSSISIRGFgsNRVLVLVDGVPlnsGGGGSVDLNSI 80
                          90       100
                  ....*....|....*....|....*..
gi 1423924282 143 DMAVYERVEILRGSNGLLHGMGNPAAT 169
Cdd:pfam07715  81 DPEDIERVEVLKGPASALYGSGAIGGV 107
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
72-712 1.10e-17

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 87.45  E-value: 1.10e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  72 EVAQSVSVIDREQIEKQNLQTLDDVMQRATGVTSA-----PYVKLTtayyVRGFQID--SFEIDGVPA----LLGNMASS 140
Cdd:TIGR01785  17 EAPASVSVISGEQIESKQANNLADALNTVPGVDVTgggrpPGQSIN----IRGLQDNrvLVVVDGARQnyqrGGAHNGSL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 141 PQDMAVYERVEILRGSNGLLHGMGNPAATVNMVRKHAP------KKNMAKLSLSAGSWD-RYRGEVDVGGLLNQSGSVRG 213
Cdd:TIGR01785  93 FVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAAdllrpgQLFGGLAKLSYGSNNnSFGGSVAVAGRLDDNLDALV 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 214 RFVmAWEDKDY--------FYDVSDQQTRLMYGTVDIDvtPDTLLRMGAqFQTIDSVTNMAGVPfgkDGSDLHLPRKTYL 285
Cdd:TIGR01785 173 AAT-YRDGGNYrngnkeeaTNSAYVQKNLLAKLGWQLD--DAQRLEFSY-FTTEGSLDEAQNSG---PGTEYVLGSSSTL 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 286 DVDWDRFKWDTSRSFAGIEHKINDNWQYKL--NAEYQHvNARLlyagawgnidpvtgdgamlmgGAYKFRNEQTSLDTsl 363
Cdd:TIGR01785 246 LASSTRDRSATLTYNWTPEDNPWLDATASLyyNRTEND-NDRS---------------------ARGVGREEGYQYTT-- 301
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 364 ngkvdawgLTHDVVVGASYSHASEKQYSADLDpALNVPVNVYRWNPHSVPKPSIGTYSSagptKTTQKGLYGMGRIKVI- 442
Cdd:TIGR01785 302 --------YGATLQNTSRFDVASWSTLTYGVD-WMKDKRRTESFDPNSVTTIVPNPPSA----KEYFFGLFLQDNIPLLd 368
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 443 EPVTVIAGLRDSWWD-----VKTPTANFTENGRLTPYGGVIWDFNPQWSWYSSYSTVYQP---------QTGKTWSGKM- 507
Cdd:TIGR01785 369 DRLTLSAGLRYDHYKlspktTADTEAVDRSYSRWSPSLGLSYKPVDWLTLYASYSQGFRApsidelygtGDHPGTPGGYt 448
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 508 ------LKPVEGQTLETGVK----GALFNGG-LNLSGAIYQIDIKN----NPQIDPAHPTGGFNNY-FISGGKVRSQGFE 571
Cdd:TIGR01785 449 fapnpnLKPETSKTWELGANlsfdNLLLDNDqLQFKVAYFYNDVKDfidlTIGVTDNVTAGMNNITqYVNIDGARIRGIE 528
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 572 LEGiGYLTPFWDVSVGYTYTDTKyrDDSQHQGEsyNTLTPRHmLRVWSNYDLPwdERKWSLGggmqAQSAYSTSN----- 646
Cdd:TIGR01785 529 ASA-SYDAGLWATGLSYGYTIGK--DQNTNQWL--SNIPPLK-LVVTVGYRFP--DRRLDLG----AKAAYYERQsespt 596
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1423924282 647 -----GNVTLRQGGYAIFNARLGYQIDETW--TAAVNVNNVFDRRYYsglfspQWNNRYG--DPRNVMFTLKADF 712
Cdd:TIGR01785 597 tedvaANGLLTTPGYTVVDLYATYQPNAVKglTVRFGVNNLTDRKYT------PAQSVPGagPGRNFKGSVKYQF 665
PRK13486 PRK13486
TonB-dependent receptor;
14-685 4.29e-13

TonB-dependent receptor;


Pssm-ID: 139606 [Multi-domain]  Cd Length: 696  Bit Score: 72.75  E-value: 4.29e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  14 RLTPCALL---CATVSWSAMVSAEpvqpkqDVIQVTASSdmdddyvapgvttlgkMALKPREVAQSVSVIDREQIEKQNL 90
Cdd:PRK13486    2 RITTLASVvipCLGFSASSIAAAE------DVMIVSASG----------------YEKKLTNAAASVSVISQEELQSSQY 59
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  91 QTLDDVMQRATGVTSAPYVKLTTAYYV--RGFQ-------IDSFEIDGVPALLGNMASSPQD-----MAVYERVEILRGS 156
Cdd:PRK13486   60 HDLAEALRSVEGVDVESGTGKTGGLEIsiRGMPasytlilIDGVRQGGSSDVTPNGFSAMNTgfmppLAAIERIEVIRGP 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 157 NGLLHGMGNPAATVNMVRKHapkknmaklslsagSWDRYRGEVDVGglLNQSGSVRgrfvmaWEDKDYFYDVSDQQtrLM 236
Cdd:PRK13486  140 MSTLYGSDAMGGVVNIITRK--------------NADKWLSSVNAG--LNLQESNK------WGNSSQFNFWSSGP--LV 195
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 237 YGTVDIDVTPDTLLRMGAQFQTIdSVTNMAGVPFGKDGS--------------------DLHLPRKTYLDVD-------- 288
Cdd:PRK13486  196 DDSVSLQVRGSTQQRQGSSVTSL-SDTAATRIPYPTESQnynlgarldwkaseqdvlwfDMDTTRQRYDNRDgqlgsltg 274
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 289 -WDR-FKWDTSRSFAGIEHKIN-DNWQYKLNAEYQHVNARLLYAGAwgnidpVTGDGAMLMGGAYKFRNEQTSLDTSLng 365
Cdd:PRK13486  275 gYDRtLRYERNKISAGYDHTFTfGTWKSYLNWNETENKGRELVRSV------LKRDKWGLAGQPRELKESNLILNSLL-- 346
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 366 kVDAWGLTHDVVVGASYSHASEKQysadldpalnvpvnvyrwnphsvpkpsiGTYSSAGPTKTTQK--GLYGMGRIKVIE 443
Cdd:PRK13486  347 -LTPLGESHLVTVGGEFQSSSMKD----------------------------GVVLASTGETFRQKswSVFAEDEWHLTD 397
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 444 PVTVIAGLRDSWWDVKtptanfteNGRLTPYGGVIWDFNPQWSWYSSYSTVYQ-PQTGKTWSG---------------KM 507
Cdd:PRK13486  398 ALALTAGSRYEHHEQF--------GGHFSPRAYLVWDVADAWTLKGGVTTGYKaPRMGQLHKGisgvsgqgktnllgnPD 469
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 508 LKPVEGQTLETGV---KGALFNGGL-----NLSGAIYQIDIKNNpqidpahptggfNNYFISGGKVRSQGFELEGIgylT 579
Cdd:PRK13486  470 LKPEESVSYEAGVyydNPAGLNANVtgfmtDFSNKIVSYSINDN------------TNSYVNSGKARLHGVEFAGT---L 534
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 580 PFW----DVSVGYTYTDTKYRD-DSQHQGESYntlTPRHMLRVWSNYDLPWDERKWsLGGG--------MQAQSAYSTSN 646
Cdd:PRK13486  535 PLWsedvTLSLNYTWTRSEQRDgDNKGAPLSY---TPEHMVNAKLNWQITEEVASW-LGARyrgktprfTQNYSSLSAVQ 610
                         730       740       750       760
                  ....*....|....*....|....*....|....*....|...
gi 1423924282 647 GNVTLRQGGY----AIFNARLGYQIDETWTAAVNVNNVFDRRY 685
Cdd:PRK13486  611 KKVYDEKGEYlkawTVVDAGLSWKMTDALTLNAAVNNLLNKDY 653
PRK13484 PRK13484
IreA family TonB-dependent siderophore receptor;
19-684 2.13e-10

IreA family TonB-dependent siderophore receptor;


Pssm-ID: 139605 [Multi-domain]  Cd Length: 682  Bit Score: 63.87  E-value: 2.13e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  19 ALLCATVSWSAMVSAEPvqpKQDVIQVTASSdmdddyvapgvttlgkMALKPREVAQSVSVIDREQIEKQNLQTLDDVMQ 98
Cdd:PRK13484   12 AVMCSAVISSGYASSDK---KEDTLVVTASG----------------FTQQLRNAPASVSVITSEQLQKKPVSDLVDAVK 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  99 RATGVT---SAPYVKLTtayyVRGFQIDSFEI--DGVPAllGNMASSPQDMAVYE-----------RVEILRGSNGLLHG 162
Cdd:PRK13484   73 DVEGISitgGNEKPDIS----IRGLSGDYTLIlvDGRRQ--SGRESRPNGSGGFEagfippveaieRIEVIRGPMSSLYG 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 163 MGNPAATVNMVRKHAPKKnmaklslsagSWDryrGEVDVGGLLNQSG----SVRGRFVMAW---EDK-------DYFYDV 228
Cdd:PRK13484  147 SDAIGGVINIITKPVNNQ----------TWD---GVLGLGGIIQEHGkfgnSTTNDFYLSGpliKDKlglqlygGMNYRK 213
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 229 SDQQTrlmYG---------TVDIDVTP------------DTLLRMGAQFQTIDSVTNMAGVpfgkdgsdlhLPRKTYLDV 287
Cdd:PRK13484  214 EDSIS---QGtpakdnkniTATLQFTPtesqkfvfeygkNNQVHTLTPGESLDAWTMRGNL----------KQPNSKRET 280
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 288 DWDRFKWDTSRSFAG-IEHKINDNWQYKLNAEYQHvnarllyagawGNIDPVTGDgamlmggAYKFRNEQTSL-DTSLNG 365
Cdd:PRK13484  281 HNSRSHWVAAWNAQGeILHPEIAVYQEKVIREVKS-----------GKKDKYNHW-------DLNYESRKPEItNTIIDA 342
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 366 KVDAWGLTHDVVVGASYSHASEKQYSadldpalnvpvnvyrwnphSVPKPSIGTYSsagpTKTTQKGLYGMGRIKVIEPV 445
Cdd:PRK13484  343 KVTAFLPENVLTIGGQFQHAELRDDS-------------------ATGKKTTETQS----VSIKQKAVFIENEYAATDSL 399
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 446 TVIAGLR-------DSWWDVKT-PTANFTENgrLTPYGGVIWDFN-PQWSWYS-SYSTVYQPQTGKTWSGKMLKPVEGQT 515
Cdd:PRK13484  400 ALTGGLRldnheiyGSYWNPRLyAVYNLTDN--LTLKGGIAKAFRaPSIREVSpGFGTLTQGGASIMYGNRDLKPETSVT 477
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 516 LETGVkGALFNGGLNLSGAIYQIDIKN---NPQIDPAHPTGGFNNY-FISGGKVRSQGFELEGIGYLTPFWDVSVGYTYT 591
Cdd:PRK13484  478 EEIGI-IYSNDSGFSASATLFNTDFKNkltSYDIGTKDPVTGLNTFiYDNVGEANIRGVELATQIPVYDKWHVSANYTFT 556
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 592 DTKYR-DDSQHQGESYN----TLTPRHMlrvwSNYDLPWDerkWSLGGGMQAQSAYS-------TSNGNVTLR-QGGYAI 658
Cdd:PRK13484  557 DSRRKsDDESLNGKSLKgeplERTPRHA----ANAKLEWD---YTQDITFYSSLNYTgkqiwaaQRNGAKVPRvRNGFTS 629
                         730       740
                  ....*....|....*....|....*.
gi 1423924282 659 FNARLGYQIDETWTAAVNVNNVFDRR 684
Cdd:PRK13484  630 MDIGLNYQILPDTLINFAVLNVTDRK 655
PRK10064 PRK10064
catecholate siderophore receptor CirA; Provisional
12-689 6.22e-08

catecholate siderophore receptor CirA; Provisional


Pssm-ID: 236646 [Multi-domain]  Cd Length: 663  Bit Score: 56.05  E-value: 6.22e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  12 IFRLTP---CALlCAtvswSAMVSAEPVQPKQDVIQ---VTASSDMDDDYVAPGvttlgkmalkprevaqSVSVIDREQI 85
Cdd:PRK10064    1 MFRLNPfvrVGL-CA----SAISCAWPVLAVDDDGEtmvVTASAVEQNLKDAPA----------------SISVITQEDL 59
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  86 EKQNLQTLDDVMQRATGVTSAPYVKLTTAYYVRGFQ-------IDSFEIDGVPALL-GN---MASSPQDmaVYERVEILR 154
Cdd:PRK10064   60 QRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDssytlilIDGKRVNSRNAVFrHNdfdLNWIPVD--AIERIEVVR 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 155 GSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSL-SAGSWDRYRGEVDVGGLLNQSGSVRGRFVMAwedkdyfydvsdqqt 233
Cdd:PRK10064  138 GPMSSLYGSDALGGVVNIITKKIGQKWHGTVTVdTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMK--------------- 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 234 rlMYGTV-----DIDVTPDTllRMGAQFQTIDSVTNMAG-VPFGKDGSDLHLPRKTYldvDWDRFKWDtsrsfagiEHKI 307
Cdd:PRK10064  203 --AYGSLakrekDDPQNSTT--TDTGETPRIEGFTSRDGnVEFAWTPNQNHDFTAGY---GFDRQDRD--------SDSL 267
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 308 NDNWQYKLNAEYQHvNARLlyagAWGNID-PVTGDGAMLMGGAYKfrNEQTSLDTSLNGKV----DAWGLThdVVVGASY 382
Cdd:PRK10064  268 DKNRLERQNYSLSH-NGRW----DYGNSElKYYGEKVENKNPGNS--SPITSESNSIDGKYtlplTAINQF--LTFGGEW 338
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 383 SHASekqysadldpaLNVPVNVyrwnphsvpkpsigTYSSAGPTKTTQKGLYGMGRIKVIEPVTVIAGLR----DSWWDV 458
Cdd:PRK10064  339 RHDK-----------LSDAVNL--------------TGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRmddhETYGDH 393
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 459 KTPTANFTENG--RLTPYGGVIWDF--------NPQW---SWYSSYSTVYQPQtgktwsgkmLKPVEGQTLETGVKGALF 525
Cdd:PRK10064  394 WSPRAYLVYNAtdTVTVKGGWATAFkapsllqlSPDWtsnSCRGACKIVGSPD---------LKPETSESWELGLYYMGE 464
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 526 NGGLNLSGA---IYQIDIKN--------NPQIDPAHP------TGG-------FNNYFISggKVRSQGFELEGIGYLTPF 581
Cdd:PRK10064  465 EGWLEGVESsvtVFRNDVDDrisisrtsDVNAAPGYQnfvgfeTNGrgrrvpvFRYYNVN--KARIQGVETELKIPFNDE 542
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 582 WDVSVGYTYTDTkyRDDSQHQGESYNTLtPRHMLRV---WSnydlPWDERKWSLggGMQAQSAYSTSNGNVTLRQ-GGYA 657
Cdd:PRK10064  543 WKLSLNYTYNDG--RDVSNGENKPLSDL-PFHTANGtldWK----PLALEDWSF--YVSGNYTGQKRADSATAKTpGGYT 613
                         730       740       750       760
                  ....*....|....*....|....*....|....*....|....*.
gi 1423924282 658 IFNARLGYQIDETWTAAVNVNNVFD--------------RRYYSGL 689
Cdd:PRK10064  614 IWNTGAAWQVTKDVKLRAGVLNLGDkdlsrddysynedgRRYFMAV 659
OMP_b-brl_3 pfam14905
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ...
478-708 2.60e-07

Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.


Pssm-ID: 434300 [Multi-domain]  Cd Length: 407  Bit Score: 53.43  E-value: 2.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 478 IWDFNPQwSWYSSYSTVYQ--PQtgktwsgkmLKPVEGQTLETGVkgaLFNGGLNLSGAIYQIDIKNNPQIDPAHPTGGF 555
Cdd:pfam14905 190 YWDLNPF-RNYSDPYNYSQgnPN---------LKPEYTNSFELGY---TYKWKLSLSLSYRYTNDVIQQTFITDDNDNVT 256
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 556 NNYFISGGKVRSQGFELEGIGYLTPFWD----VSVGYTYTDTKYRDDSQHQGESYNtltprhmLRVWSNYDLPWDerkWS 631
Cdd:pfam14905 257 YTTYENLGKSNSYGLELSASFNPTKWWSlngnLNGYYNKYKIDGSLNSDFSNFGFN-------WNLNNTFTLPKG---WS 326
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 632 LgggmQAQSAYSTSNGNVTLRQGGYAIFNARLGYQI-DETWTAAVNVNNVFDRR------YYSGLFSpQWNNRYGDPRNV 704
Cdd:pfam14905 327 L----QLNGNYRSPRVTGQGKIKPFYSLDLGLSKSFlKKKLTLSLNVNDIFNTRkfrsttNYDNGFI-QSYNNKWDSRSV 401

                  ....
gi 1423924282 705 MFTL 708
Cdd:pfam14905 402 RLSL 405
PRK13513 PRK13513
ligand-gated channel protein;
472-684 3.43e-06

ligand-gated channel protein;


Pssm-ID: 184104 [Multi-domain]  Cd Length: 659  Bit Score: 50.54  E-value: 3.43e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 472 TPYGGVIWDFNPQWSWYSSYSTVYQP----QTGKTWsGKM---------------LKPVEGQTLETGVkgaLFNG--GLN 530
Cdd:PRK13513  397 TPRLYGVWHLADQWTLKGGVSTGYRSpdlrQATDNW-GQLtgggglpalilgnsdLKPEKSISQEIGI---LWDNqeNLN 472
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 531 LSGAIYQIDIKN---------NPQIDPAHPTGGFNNYFISG----GKVRSQGFELEGIGYLTPFWDVSVGYTYTDTKYRD 597
Cdd:PRK13513  473 ASVTLFNTDFKDkitevrncdTTNTDGQCVFNGINYDFISDrinvDKANMRGVEATFNWDINQAWSLATNYTFTQSEQKS 552
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 598 dSQHQGESYNTLtPRHMLRVWSNYDLPWDERKWSLGG--GMQAQSAYSTSNGNVTlrqGGYAIFNARLGYQIDETWTAAV 675
Cdd:PRK13513  553 -GAFAGQPLNQM-PKHMANATLNWQTTEDFATWIRINyrGKTSEYLNRTSMGSGT---PSYTFVDLGASYQLTKELRLMG 627

                  ....*....
gi 1423924282 676 NVNNVFDRR 684
Cdd:PRK13513  628 GVYNLLDKR 636
PRK13483 PRK13483
ligand-gated channel protein;
14-689 3.24e-03

ligand-gated channel protein;


Pssm-ID: 184080 [Multi-domain]  Cd Length: 660  Bit Score: 40.91  E-value: 3.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  14 RLTPCALLCATVSWSAMVSAEPVQPKQDVIqVTASSDMDDDYVAPGvttlgkmalkprevaqSVSVIDREQIEKQNLQTL 93
Cdd:PRK13483    8 VISALCLLPAVFVTHALAQAAPDKTMETVV-VTASGYEQQIRDAPA----------------SISVITREDLENRFYRDL 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282  94 DDVMQRATGVTSAPYVKlTTAYYVRGF-----QI----------------DSFEIDG--VPALlgnmasspqdmAVYERV 150
Cdd:PRK13483   71 TDALLDVPGVVVTGGGD-RTDISLRGMgsqytLIlvdgkrqssretrpnsDGPGVEQawTPPL-----------AAIERI 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 151 EILRGSNGLLHGMGNPAATVNMVRKHAPKKNMAKLSLSA------GSWDRYRGEVDVGGLL---NQSGSVRGRFVMAWED 221
Cdd:PRK13483  139 EVIRGPMSSLYGSDAIGGVINIITRKVPNEWQGEVRLDTtlqensDSGNVYQANFFVNGPLikdLLGLQLYGQYTQREED 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 222 K-DYFYDVSDQQTRlmygTVDIDVTP----DTLLRMGAQFQTID-----SVTNMA-GVPFGKDG----SDLHLPRKTYLD 286
Cdd:PRK13483  219 DiEGGYRDKDARSL----TAKLALTPnedhDIMLEVGTSNQERDstvgkTVAPLApGESCGRRGcpesSTTEYERSTVSL 294
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 287 VDWDRFKWDTSRSFagIEHKINDNwqyklnaeyqhvNARllyagawgnidpvtgdgAMLMggayKFRNEQTSLDTSLngk 366
Cdd:PRK13483  295 SHTGRWDFGTSDTY--IQHEEFDN------------KSR-----------------EMKI----KNTDFQSSLVAPL--- 336
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 367 vdawGLTHDVVVGASYSHAS-EKQYSADLdpalnvpvnvyrwnphsvpkpsigtyssAGPTKT--TQKGLYGMGRIKVIE 443
Cdd:PRK13483  337 ----GQEHTLTFGAAYNHQDlTDETSNQI----------------------------SDLTDIsrTQWAVFSEDEWRIAD 384
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 444 PVTVIAGLR---DSwwdvktptaNFteNGRLTP--YGgvIWDFNPQWSWYSSYSTVYQP----QTGKTWS-----GKM-- 507
Cdd:PRK13483  385 DFALTGGLRldhDE---------NF--GGHVSPrvYG--VWNLAPSWTVKGGVSTGFRApslrQTTPDWGqvsrgGNIyg 451
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 508 ---LKPVEGQTLETGV---KGALFNGGLNL-----SGAIYQIDIKNNPQIDPAHPTGGFNNYFISGGKVRSQGFELEGIG 576
Cdd:PRK13483  452 npdLKPETSLNKELGLyydLGSGLTASLTVfynefKDKITRVACPATQCTDGPNQFGADPTTYVNIDEAVTQGVEASLSY 531
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423924282 577 YLTPFWDVSVGYTYTDTKYRdDSQHQGESYNTLtPRHMLRVWSNYDLPWDERKWS----LGGGMQAQSAYSTSngnvTLR 652
Cdd:PRK13483  532 PITSTLSLSGNYTYTDSEQK-SGAYKGSPLNQL-PKHLFQASLNWEPTDRLNSWArvnyRGEESQPTTGPSSS----SFI 605
                         730       740       750       760       770
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1423924282 653 QGGYAIFNARLGYQIDETWTAAVNVNNVFD--------------RRYYSGL 689
Cdd:PRK13483  606 APSYTFLDLGANYQLTDNLKLSAGIYNLFDkeinyeeygyvedgRRYWLGM 656
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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