|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
1-1025 |
0e+00 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 2083.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 1 MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEM 80
Cdd:PRK10614 1 MKFFALFIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 81 TSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFAST 160
Cdd:PRK10614 81 TSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGQLYDFAST 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 161 QLAPTISQIDGVADVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAE 240
Cdd:PRK10614 161 QLAQTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRQAISNANVRRPQGAVEDGTHRWQIQTNDELKTAAE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 241 YQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIA 320
Cdd:PRK10614 241 YQPLIIHYNNGAAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDRIRAKLPELRETIPAAIDLQIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 321 QDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVV 400
Cdd:PRK10614 321 QDRSPTIRASLEEVEQTLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 401 DDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLT 480
Cdd:PRK10614 401 DDAIVVLENISRHLEAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVTLSVAIGISLLVSLT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 481 LTPMMCGWMLKASKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVL 560
Cdd:PRK10614 481 LTPMMCAWLLKSSKPREQKRLRGFGRMLVALQQGYGRSLKWVLNHTRWVGVVLLGTIALNVWLYISIPKTFFPEQDTGRL 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 561 MGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGA 640
Cdd:PRK10614 561 MGFIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPLSERSETAQQVIDRLRVKLAKEPGA 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 641 NLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDV 720
Cdd:PRK10614 641 NLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKALAALPELADVNSDQQDKGAEMALTYDRDTMARLGIDV 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 721 QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSA 800
Cdd:PRK10614 721 QAANSLLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSA 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 801 ASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTI 880
Cdd:PRK10614 801 ASTISFNLPTGKSLSDASAAIERAMTQLGVPSTVRGSFAGTAQVFQETMNSQLILILAAIATVYIVLGILYESYVHPLTI 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 881 LSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLA 960
Cdd:PRK10614 881 LSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGNLTAQEAIFQACLLRFRPIMMTTLA 960
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1425910443 961 ALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE 1025
Cdd:PRK10614 961 ALFGALPLVLSGGDGAELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE 1025
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
4-1010 |
0e+00 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 1459.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 4 FALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSS 83
Cdd:NF033617 1 SDVFIKRPVATLLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 84 SSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLA 163
Cdd:NF033617 81 SSLGYSTITLQFRLGTDLDVALSEVQAAINAAQSLLPSEAPDPPVYRKANSADTPIMYIGLTSEEMPRGQLTDYAERVLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 164 PTISQIDGVADVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAEYQP 243
Cdd:NF033617 161 PKLSQINGVGSVDVSGGQRPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVRGDSVVSTVRANDQLKTAEDYED 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 244 LIIHYN-NGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQD 322
Cdd:NF033617 241 LVIKYAdNGAPVRLGDVATVELGAENVRNRAWANGVPAVVLGINRQPGANPIEVADEIRALLPELQETLPKNIKVNVLYD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 323 RSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDD 402
Cdd:NF033617 321 RTRFIRASIDEVESTLLEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMALVLAIGLVVDD 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 403 AIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLT 482
Cdd:NF033617 401 AIVVVENIHRHIEEGESPLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFREFAVTLAGAVIISGIVALTLT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 483 PMMCGWMLKASkPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMG 562
Cdd:NF033617 481 PMMCSRLLKAN-EKPGRFARAVDRFFDGLTARYGRGLKWVLKHRPLTLVVALATLALLPLLYVFIPKELAPSEDRGVIFG 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 563 GIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNS---GMMFITLKPRDERSETAQQIIDRLRVKLAKEPG 639
Cdd:NF033617 560 MIQAPQSISLDYMSAKMRDVEKILSSDPEVQSLTSFNGVGGNPGdntGFGIINLKPWDERDVSAQEIIDRLRPKLAKVPG 639
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 640 ANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGID 719
Cdd:NF033617 640 MDLFLFPLQDLPGGAGSSLPQYQVTLTPSDYDSLFTWAEKLKEKLRKSPQFADVDSDLQDKGPELNVDIDRDKAARLGIS 719
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 720 VQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLS 799
Cdd:NF033617 720 MQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQIYVRSNDGKLVPLSTLAKIEERAAPLSLNHFNQF 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 800 AASTISFNLPTGKSLSDASAAIDRAMTQLgVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLT 879
Cdd:NF033617 800 NSATLSFNLAPGVSLGEAIEALDQAAKEL-LPSGISGSFQGAARAFQEEGSSLLFLFLLALAAIYLVLAIQYESFVDPLT 878
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 880 ILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTL 959
Cdd:NF033617 879 ILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFANELQRHQGLSRREAIYQAAALRLRPILMTTL 958
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|.
gi 1425910443 960 AALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDR 1010
Cdd:NF033617 959 AMLLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGTLFTLFVLPVVYLLLAR 1009
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
3-1009 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 1240.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 3 FFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTS 82
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 83 SSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMpSRPTYRKANPSDAPIMILTLTSD--TYSQGELYDFAST 160
Cdd:pfam00873 81 QSSYGLSSITLTFELGTDIDIARQDVQNRLQLATPLLPEGV-QRPGISVIKTSLGPIMVLAVTSPdgSYTQTDLRDYADT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 161 QLAPTISQIDGVADVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAE 240
Cdd:pfam00873 160 NIKPQLSRVPGVGDVQLFGGSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQLQSAED 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 241 YQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIA 320
Cdd:pfam00873 240 FEKIIVKNQDGSPVRLRDVATVELGSELYRGFATFNGKPAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQGVEIVVV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 321 QDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVV 400
Cdd:pfam00873 320 YDTTPFIRASIEEVVKTLLEAIVLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLVLAIGLVV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 401 DDAIVVLENIARHLEA-GMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSL 479
Cdd:pfam00873 400 DDAIVVVENIERVLEEnGLKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFAITIVLAILLSVLVAL 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 480 TLTPMMCGWMLKASKPREQKRL-RGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTG 558
Cdd:pfam00873 480 TLTPALCATLLKPRREPKHGGFfRWFNRMFDRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWLFVRIPTEFLPEEDEG 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 559 VLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGS------RVNSGMMFITLKPRDER---SETAQQIIDR 629
Cdd:pfam00873 560 VFVTSAQLPPGVSLDQTQRVMKQVEKILKEKPEVESVFAVTGFAfsgdnnGPNSGDAFISLKPWKERpgpEKSVQALIER 639
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 630 LRVKLAKEPGANLFLMAVQDIRV--GGRQSNASYQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLV 707
Cdd:pfam00873 640 LRKALKQIPGANVFLFQPIQLRGlgTISGFRSDLQVKIFGDDLDALDEARNQILAALAQLPGLSDVRSDGQEDQPQLQVN 719
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 708 YDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPA 787
Cdd:pfam00873 720 IDREKAARLGVSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYVRNPYGKMIPLSAFAKIEWG 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 788 NAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVL 867
Cdd:pfam00873 800 YGPPSINRYNGFRSIVISGNVAAGDSLGDAMEAMAQIAKQVKLPPGYGYTWTGQFEQEQLAGNSLPILIALALLVVFLVL 879
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 868 GILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQAC 947
Cdd:pfam00873 880 AALYESWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVEFANELREQEGKSLEEAILEAC 959
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1425910443 948 LLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFD 1009
Cdd:pfam00873 960 RLRLRPILMTALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTVLTLLVVPVFYVLFH 1021
|
|
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
1-1015 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 1187.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 1 MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEM 80
Cdd:COG0841 1 MNLSRFFIRRPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKYI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 81 TSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMpSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFAST 160
Cdd:COG0841 81 TSTSSEGSSSITVEFELGTDIDEALVDVQNAVDRARSDLPEDV-EPPGVTKVNPSDFPVMVLALSSDDLDELELSDYAER 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 161 QLAPTISQIDGVADVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAE 240
Cdd:COG0841 160 NIKDRLERVPGVGQVQIFGGREREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGGGDREYTVRTNGRLKTPEE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 241 YQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIA 320
Cdd:COG0841 240 FENIVIRTNDGSVVRLGDVARVEDGAEDYRSIARLNGKPAVGLAIQKQPGANALEVADAVRAKLEELQASLPEGVELTIV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 321 QDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVV 400
Cdd:COG0841 320 YDQSEFIRASIEEVVKTLLEAILLVVLVVFLFLRSWRATLIPAVAIPVSLIGTFAVMYLLGFSLNILTLFALVLAIGIVV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 401 DDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLT 480
Cdd:COG0841 400 DDAIVVVENIERHMEEGLSPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQLFRQFALTVAIALLISLFVALT 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 481 LTPMMCGWMLKASKPREQKRL-RGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGV 559
Cdd:COG0841 480 LTPALCARLLKPHPKGKKGRFfRAFNRGFDRLTRGYGRLLRWALRHRKLTLLVALALLALSVLLFGRLPTEFFPEEDQGQ 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 560 LMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTG----GSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLA 635
Cdd:COG0841 560 IIVSVQLPPGTSLERTEAVVRQVEEILLEVPEVESVFSVVGfsggGSGSNSGTIFVTLKPWDERDRSADEIIARLREKLA 639
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 636 KEPGANLFLMAVQDirvGGRQSNASYQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMAR 715
Cdd:COG0841 640 KIPGARVFVFQPPA---GGLGSGAPIEVQLQGDDLEELAAAAEKLLAALRQIPGLVDVRSDLQLGKPELQLDIDREKAAA 716
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 716 LGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNH 795
Cdd:COG0841 717 LGVTVADVASTLRAALGGRYVNDFNRGGREYDVRVQAPEEDRNSPEDLENLYVRTPDGEMVPLSSVATIEEGTGPSSINR 796
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 796 QGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYV 875
Cdd:COG0841 797 YNGQRSVTVSANLAPGVSLGEALAAIEELAAELKLPPGVSIEFTGQAEEEQESFSSLGLAFLLALLLVYLVLAAQFESFI 876
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 876 HPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGnLTPQEAIFQACLLRFRPIM 955
Cdd:COG0841 877 QPLIILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNAILLVDFANQLREEG-MSLREAILEAARLRLRPIL 955
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 956 MTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRF 1015
Cdd:COG0841 956 MTSLATILGLLPLALGTGAGAEFRQPLGIAVIGGLLFSTLLTLFVVPVLYVLLDRLRRRL 1015
|
|
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
6-1025 |
0e+00 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 1087.07 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 6 LFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSS 85
Cdd:PRK10503 15 LFILRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSS 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 86 LGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPT 165
Cdd:PRK10503 95 GGASVITLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQK 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 166 ISQIDGVADVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAEYQPLI 245
Cdd:PRK10503 175 ISQVSGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPTRAVTLSANDQMQSAEEYRQLI 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 246 IHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSP 325
Cdd:PRK10503 255 IAYQNGAPIRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTT 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 326 TIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIV 405
Cdd:PRK10503 335 NIRASVDDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIV 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 406 VLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMM 485
Cdd:PRK10503 415 VIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAILISAVVSLTLTPMM 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 486 CGWMLKASKPREQKRL-RGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGI 564
Cdd:PRK10503 495 CARMLSQESLRKQNRFsRASERMFDRVIAAYGRGLAKVLNHPWLTLSVALSTLLLTVLLWIFIPKGFFPVQDNGIIQGTL 574
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 565 QADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTG----GSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGA 640
Cdd:PRK10503 575 QAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGvdgtNPSLNSARLQINLKPLDERDDRVQKVIARLQTAVAKVPGV 654
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 641 NLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDV 720
Cdd:PRK10503 655 DLYLQPTQDLTIDTQVSRTQYQFTLQATSLDALSTWVPKLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISM 734
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 721 QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSA 800
Cdd:PRK10503 735 ADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIATIEQRFGPLSINHLDQFP 814
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 801 ASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTI 880
Cdd:PRK10503 815 STTISFNVPDGYSLGDAVQAIMDTEKTLNLPADITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIVLGVLYESFIHPITI 894
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 881 LSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLA 960
Cdd:PRK10503 895 LSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTTLA 974
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1425910443 961 ALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE 1025
Cdd:PRK10503 975 ALLGALPLMLSTGVGAELRRPLGICMVGGLIVSQVLTLFTTPVIYLLFDRLALYTKSRFPRHEEE 1039
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
7-1025 |
1.05e-171 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 530.07 E-value: 1.05e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 7 FIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSS-S 85
Cdd:TIGR00915 5 FIDRPIFAWVIAIIIMLAGTLSILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSSSSdS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 86 LGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMpSRPTYRKANPSDAPIMILTLTSD--TYSQGELYDFASTQLA 163
Cdd:TIGR00915 85 DGSMTITLTFEQGTDPDIAQVQVQNKLQLATPLLPQEV-QRQGVRVEKASSNFLMVIGLVSDdgSMTKEDLSDYAASNMV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 164 PTISQIDGVADVDVGGSsLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQG------ALEDGTHRWQIQTNDELKT 237
Cdd:TIGR00915 164 DPLSRLEGVGDVQLFGS-QYAMRIWLDPAKLNSYQLTPADVISAISAQNAQISAGqlgglpAVPGQQLNATIIAQTRLQT 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 238 AAEYQPLIIHYN-NGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAID 316
Cdd:TIGR00915 243 PEQFENILLKVNtDGSQVRLKDVARVELGGENYSISARFNGKPASGLAIKLATGANALDTAKAVKAELAVLEPFFPQGMK 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 317 LQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIAT 396
Cdd:TIGR00915 323 YVYPYDTTPFVEASIEEVVHTLIEAIVLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFAMVLAI 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 397 GFVVDDAIVVLENIARHL-EAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISL 475
Cdd:TIGR00915 403 GLLVDDAIVVVENVERVMaEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSV 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 476 LVSLTLTPMMCGWMLKASKPREQKRLRG-----FGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKT 550
Cdd:TIGR00915 483 LVALILTPALCATMLKPIEKGEHHEKKGgffgwFNRMFDSSTHGYENGVGKILRRRGRYLLVYVLLVGGMVFLFVRLPTS 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 551 FFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPA-----VDNVTGFT-GGSRVNSGMMFITLKPRDERS---E 621
Cdd:TIGR00915 563 FLPDEDQGVFMTIVQLPAGATAERTQAVLAQVTKYLLAKEKanvesVFTVNGFSfAGRGQNMGMAFIRLKDWEERTgkeN 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 622 TAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQytlLSD----DLAALREWEPKIRKKLATLPELADVNSDQ 697
Cdd:TIGR00915 643 SVFAIAGRATGHFMQIKDAMVIAFVPPAILELGNATGFDFF---LQDraglGHEALLQARNQLLGLAAQNPALTRVRPNG 719
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 698 QDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIP 777
Cdd:TIGR00915 720 LEDEPQLKIDIDREKAQALGVSIADINTTLSTAWGSSYVNDFIDRGRVKRVYVQAEEDARMSPEDINKWYVRNASGEMVP 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 778 LSYFA--KWQpANAPLSVNHQGLSAAStISFNLPTGKSLSDASAAIDRAMTQLgvPSTVrgSFAGTAQVFQETMN-SQVI 854
Cdd:TIGR00915 800 FSAFAtvRWE-YGSPQLERYNGLPSME-ILGSAAPGVSTGQAMAAMEAIAQKL--PPGF--GFSWTGMSYEERLSgSQAP 873
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 855 LIIA-AIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQR 933
Cdd:TIGR00915 874 ALYAlSLLVVFLCLAALYESWSIPVSVMLVVPLGIIGALLATTLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAKELMA 953
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 934 HGNlTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRL 1013
Cdd:TIGR00915 954 QGK-SIVEAALEAARLRLRPILMTSLAFILGVVPLAISTGAGSGSQHAIGTGVFGGMVTATVLAIFFVPLFYVVVRRLFK 1032
|
1050
....*....|..
gi 1425910443 1014 RFSRKPKQTVTE 1025
Cdd:TIGR00915 1033 RKAHEKEMSVEH 1044
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
10-1014 |
3.58e-157 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 491.47 E-value: 3.58e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 10 RPVATILLSVAITLCGILGFRMLPVAPLP-----QVdfpVIMVSAslPGASPETMASSVATPLERSLGRIAGVSEMTSSS 84
Cdd:COG3696 12 NRLLVLLLTLLLAAAGIYSLRRLPIDAFPditnvQV---QVITEA--PGLSPEEVEQQVTYPIETALNGLPGVKEVRSIS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 85 SLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGmpsrptyrkANPSDAP-------IMILTLTSD--TYSQGELY 155
Cdd:COG3696 87 RFGLSVVTVIFEDGTDIYWARQLVLERLQQVREQLPAG---------VTPELGPistglgeIYQYTLESDpgKYSLMELR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 156 DFASTQLAPTISQIDGVADVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDEL 235
Cdd:COG3696 158 TLQDWVIRPQLRSVPGVAEVNSFGGFVKQYQVLVDPAKLRAYGLTLDDVIEALERNNANVGGGYIERGGQEYLVRGIGLI 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 236 KTAAEYQPLIIHYNNGGAVRLGDVATVTDSvQDVRN--AGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPA 313
Cdd:COG3696 238 RSLEDIENIVVKTRNGTPVLLRDVAEVRIG-PAPRRgaATLNGEGEVVGGIVLMLKGENALEVIEAVKAKLAELKPSLPE 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 314 AIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALT 393
Cdd:COG3696 317 GVKIVPFYDRSDLIDRAIHTVTKNLLEGALLVILVLFLFLGNLRAALIVALAIPLSLLFAFIVMRLFGISANLMSLGGLA 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 394 IATGFVVDDAIVVLENIARHLE------AGMKPLQAALQGTREVG----FTVLSMSLSLVAVFLplllmgglpgrllreF 463
Cdd:COG3696 397 IDFGIIVDGAVVMVENILRRLEenraagTPRERLEVVLEAAREVRrpifFATLIIILVFLPIFT---------------L 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 464 -----------AVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLrgfgrmLVALQQGYGKSLKWVLNHTRLVGVV 532
Cdd:COG3696 462 egvegklfrpmALTVIFALLGALLLSLTLVPVLASLLLRGKVPEKENPL------VRWLKRLYRPLLRWALRHPKLVLAV 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 533 LLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGgsR--------- 603
Cdd:COG3696 536 ALVLLVLALALFPRLGSEFLPELDEGDLLVMATLPPGISLEESVELGQQVERILKSFPEVESVVSRTG--Raedatdpmg 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 604 VNSGMMFITLKPRDE--RSETAQQIIDRLRVKLAKEPGANL-FLMAVQDiRV-----GGRQSNAsyqYTLLSDDLAALRE 675
Cdd:COG3696 614 VNMSETFVILKPRSEwrSGRTKEELIAEMREALEQIPGVNFnFSQPIQM-RVdellsGVRADVA---VKIFGDDLDVLRR 689
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 676 WEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPR 755
Cdd:COG3696 690 LAEQIEAVLKTVPGAADVQVERVTGLPQLDIRIDRDAAARYGLNVADVQDVVETAIGGKAVGQVYEGERRFDIVVRLPEE 769
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 756 YTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTISFNLpTGKSLS----DASAAIDRamtQLGVP 831
Cdd:COG3696 770 LRDDPEAIRNLPIPTPSGAQVPLSQVADIEVVEGPNQISRENGRRRIVVQANV-RGRDLGsfvaEAQAKVAE---QVKLP 845
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 832 STVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIM 911
Cdd:COG3696 846 PGYYIEWGGQFENLQRATARLAIVVPLALLLIFLLLYLAFGSVRDALLILLNVPFALIGGVLALWLRGMPLSVSAGVGFI 925
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 912 LLIGIVKKNAIMMVDFALEAQRHGnLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLV 991
Cdd:COG3696 926 ALFGVAVLNGVVLVSYINQLRAEG-LDLREAIIEGALERLRPVLMTALVAALGLLPMALSTGPGSEVQRPLATVVIGGLI 1004
|
1050 1060
....*....|....*....|...
gi 1425910443 992 MSQLLTLYTTPVVYLFFDRLRLR 1014
Cdd:COG3696 1005 TSTLLTLLVLPALYLLFGRRRLR 1027
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
1-1005 |
2.17e-140 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 446.97 E-value: 2.17e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 1 MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEM 80
Cdd:PRK09579 1 MAFTDPFIRRPVLASVVSLLIVLLGFQAWSKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 81 TSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSrPTYRKANPSDAPIMILTLTSDTYSQGELYDFAST 160
Cdd:PRK09579 81 TSVSRQNFSIISIYARIGADSDRLFTELLAKANEVKNQLPQDAED-PVLSKEAADASALMYISFYSEEMSNPQITDYLSR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 161 QLAPTISQIDGVADVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAE 240
Cdd:PRK09579 160 VIQPKLATLPGMAEAEILGNQVFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVKGEYVVTSINASTELKSAEA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 241 YQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIA 320
Cdd:PRK09579 240 FAAIPVKTSGDSRVLLGDVARVEMGAENYDSISSFDGIPSVYIGIKATPSANPLDVIKEVRAIMPELESQLPPNLKVSIA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 321 QDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVV 400
Cdd:PRK09579 320 YDATLFIQASIDEVVKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTLLAMVLAIGLVV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 401 DDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLT 480
Cdd:PRK09579 400 DDAIVVVENIHRHIEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALT 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 481 LTPMMCGWMLkaskpREQKRLRGFG----RMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQD 556
Cdd:PRK09579 480 LSPMMCALLL-----RHEENPSGLAhrldRLFERLKQRYQRALHGTLNTRPVVLVFAVIVLALIPVLLKFTQSELAPEED 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 557 TGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLAK 636
Cdd:PRK09579 555 QGIIFMMSSSPQPANLDYLNAYTDEFTPIFKSFPEYYSSFQINGFNGVQSGIGGFLLKPWNERERTQMELLPLVQAKLEE 634
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 637 EPGANLFLMAVQDIRVGGRqsNASYQYTL-LSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMAR 715
Cdd:PRK09579 635 IPGLQIFGFNLPSLPGTGE--GLPFQFVInTANDYESLLQVAQRVKQRAQESGKFAFLDIDLAFDKPEVVVDIDRAKAAQ 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 716 LGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNH 795
Cdd:PRK09579 713 MGVSMQDLGGTLATLLGEGEINRFTIDGRSYKVIAQVERPYRDNPGWLNNYYVKNEQGQLLPLSTLITLSDRARPRQLNQ 792
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 796 -QGLSAAstisfnLPTGKSLSDASAAID--RAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYE 872
Cdd:PRK09579 793 fQQLNSA------IISGFPIVSMGEAIEtvQQIAREEAPEGFAFDYAGASRQYVQEGSALWVTFGLALAIIFLVLAAQFE 866
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 873 SYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFR 952
Cdd:PRK09579 867 SFRDPLVILVTVPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRHEQGLSRREAIEEAAAIRLR 946
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|...
gi 1425910443 953 PIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVY 1005
Cdd:PRK09579 947 PVLMTTAAMVFGMVPLILATGAGAVSRFDIGLVIATGMSIGTLFTLFVLPCIY 999
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
7-1019 |
1.19e-131 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 424.26 E-value: 1.19e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 7 FIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSL 86
Cdd:PRK09577 5 FIDRPVFAWVISLFIMLGGIFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSATSSA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 87 GSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMpSRPTYRKANPSDAPIMILTLTSDT--YSQGELYDFASTQLAP 164
Cdd:PRK09577 85 GQASLSLTFKQGVNADLAAVEVQNRLKTVEARLPEPV-RRDGIQVEKAADNIQLIVSLTSDDgrLTGVELGEYASANVLQ 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 165 TISQIDGVADVDVGGSSLpAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGAL------EDGTHRWQIQTNDELKTA 238
Cdd:PRK09577 164 ALRRVEGVGKVQFWGAEY-AMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIgrsavpDSAPIAATVFADAPLKTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 239 AEYQPLIIHYN-NGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDL 317
Cdd:PRK09577 243 EDFGAIALRARaDGSALYLRDVARIEFGGNDYNYPSYVNGKTATGMGIKLAPGSNAVATEKRVRATMDELSRYFPPGVKY 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 318 QIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATG 397
Cdd:PRK09577 323 QIPYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAAGFSINVLTMFGMVLAIG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 398 FVVDDAIVVLENIARHL-EAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLL 476
Cdd:PRK09577 403 ILVDDAIVVVENVERLMvEEGLSPYDATVKAMKQISGAIVGITVVLTSVFVPMAFFGGAVGNIYRQFALSLAVSIGFSAF 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 477 VSLTLTPMMCGWMLK-ASKPREQKR--LRGFGRMLVALQQGY--------GKSLKWVLNHTRLVGVVLLgtialniwLYI 545
Cdd:PRK09577 483 LALSLTPALCATLLKpVDGDHHEKRgfFGWFNRFVARSTQRYatrvgailKRPLRWLVVYGALTAAAAL--------LFT 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 546 SIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTG----GSRVNSGMMFITLKPRDERSE 621
Cdd:PRK09577 555 RLPTAFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYLRRHEPVAYTFALGGfnlyGEGPNGGMIFVTLKDWKERKA 634
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 622 TAQQ---IIDRLRVKLAKEPGANLFLMAVQ-----------DIRVGGRqSNASYQytllsdDLAALREwepKIRKKLATL 687
Cdd:PRK09577 635 ARDHvqaIVARINERFAGTPNTTVFAMNSPalpdlgstsgfDFRLQDR-GGLGYA------AFVAARE---QLLAEGAKD 704
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 688 PELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMF 767
Cdd:PRK09577 705 PALTDLMFAGTQDAPQLKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDFMHGSQVRRVIVQADGRHRLDPDDVKKLR 784
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 768 VINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLgvPSTVrgSFAGTAQVFQE 847
Cdd:PRK09577 785 VRNAQGEMVPLAAFATLHWTLGPPQLTRYNGYPSFTINGSAAPGHSSGEAMAAIERIAATL--PAGI--GYAWSGQSFEE 860
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 848 TMN-SQVILIIA-AIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMV 925
Cdd:PRK09577 861 RLSgAQAPMLFAlSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLIATIGLSAKNAILIV 940
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 926 DFA--LEAQRHGNLtpqEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPV 1003
Cdd:PRK09577 941 EVAkdLVAQRMSLA---DAALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQIAIGTGVLGGVITATVLAVFLVPL 1017
|
1050
....*....|....*.
gi 1425910443 1004 VYLFFDRLrLRFSRKP 1019
Cdd:PRK09577 1018 FFVVVGRL-FDVGPRR 1032
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
7-1020 |
3.19e-125 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 407.29 E-value: 3.19e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 7 FIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTS-SSS 85
Cdd:PRK10555 5 FIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSqSSG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 86 LGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRP-TYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAP 164
Cdd:PRK10555 85 TGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGvTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQD 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 165 TISQIDGVADVDVGGSSLpAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGAL------EDGTHRWQIQTNDELKTA 238
Cdd:PRK10555 165 PLSRVNGVGDIDAYGSQY-SMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQLggtpsvDKQALNATINAQSLLQTP 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 239 AEYQPLIIHYN-NGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDL 317
Cdd:PRK10555 244 EQFRDITLRVNqDGSEVTLGDVATVELGAEKYDYLSRFNGKPASGLGVKLASGANEMATAKLVLNRLDELAQYFPHGLEY 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 318 QIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATG 397
Cdd:PRK10555 324 KVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINTLTMFAMVLAIG 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 398 FVVDDAIVVLENIARHL-EAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLL 476
Cdd:PRK10555 404 LLVDDAIVVVENVERIMsEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVSAMVLSVL 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 477 VSLTLTPMMCGWMLKASKPREQKRLRG--------FGRMLVALQQGYGK----SLKWVlnhtrLVGVVLLGTIAlniWLY 544
Cdd:PRK10555 484 VAMILTPALCATLLKPLKKGEHHGQKGffgwfnrmFNRNAERYEKGVAKilhrSLRWI-----LIYVLLLGGMV---FLF 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 545 ISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFT------GGSRVNSGMMFITLKPRDE 618
Cdd:PRK10555 556 LRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEKVEKYYFTHEKDNVMSVFAtvgsgpGGNGQNVARMFIRLKDWDE 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 619 R---SETAQQIIDRLRVKLAKEPGANLFlmAVQDIRVGGRQSNASYQYTLLS------DDLAALREwepKIRKKLATLPE 689
Cdd:PRK10555 636 RdskTGTSFAIIERATKAFNKIKEARVI--ASSPPAISGLGSSAGFDMELQDhagaghDALMAARN---QLLALAAKNPE 710
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 690 LADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVI 769
Cdd:PRK10555 711 LTRVRHNGLDDSPQLQIDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVR 790
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 770 NNEGKAIPLSYFA--KWQpANAPLSVNHQGLSAASTISFNLPtGKSLSDASAAIDRAMTQLgvPSTVrgSFAGTAQVFQE 847
Cdd:PRK10555 791 NKDGGMVPFSAFAtsRWE-TGSPRLERYNGYSAVEIVGEAAP-GVSTGTAMDIMESLVKQL--PNGF--GLEWTAMSYQE 864
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 848 TMN-SQVILIIA-AIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMV 925
Cdd:PRK10555 865 RLSgAQAPALYAiSLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIV 944
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 926 DFALEAQRHGNlTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPvvy 1005
Cdd:PRK10555 945 EFANEMNQKGH-DLFEATLHASRQRLRPILMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISATILAIFFVP--- 1020
|
1050
....*....|....*
gi 1425910443 1006 LFFDRLRLRFSRKPK 1020
Cdd:PRK10555 1021 LFFVLVRRRFPLKPR 1035
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
6-1018 |
8.54e-119 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 390.03 E-value: 8.54e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 6 LFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSS- 84
Cdd:PRK15127 4 FFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSd 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 85 SLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRP-TYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLA 163
Cdd:PRK15127 84 STGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQEVQQQGvSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMK 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 164 PTISQIDGVADVDVGGSSLpAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALeDGTH-------RWQIQTNDELK 236
Cdd:PRK15127 164 DPISRTSGVGDVQLFGSQY-AMRIWMNPNELNKFQLTPVDVINAIKAQNAQVAAGQL-GGTPpvkgqqlNASIIAQTRLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 237 TAAEYQPLIIHYN-NGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAI 315
Cdd:PRK15127 242 STEEFGKILLKVNqDGSRVRLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 316 DLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIA 395
Cdd:PRK15127 322 KIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLA 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 396 TGFVVDDAIVVLENIARHL-EAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGIS 474
Cdd:PRK15127 402 IGLLVDDAIVVVENVERVMaEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALS 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 475 LLVSLTLTPMMCGWMLKASKPREQKRLRG-----FGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPK 549
Cdd:PRK15127 482 VLVALILTPALCATMLKPIAKGDHGEGKKgffgwFNRMFEKSTHHYTDSVGNILRSTGRYLVLYLIIVVGMAYLFVRLPS 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 550 TFFPEQDTGVLMGGIQ----ADQSISFQAMRGKLQDFMKIIRDD-PAVDNVTGFT-GGSRVNSGMMFITLKPRDERSETA 623
Cdd:PRK15127 562 SFLPDEDQGVFLTMVQlpagATQERTQKVLNEVTDYYLTKEKNNvESVFAVNGFGfAGRGQNTGIAFVSLKDWADRPGEE 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 624 QQ---IIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYT----LLSDDLAALREwepKIRKKLATLPE-LADVNS 695
Cdd:PRK15127 642 NKveaITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDFELIdqagLGHEKLTQARN---QLLGEAAKHPDmLVGVRP 718
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 696 DQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKA 775
Cdd:PRK15127 719 NGLEDTPQFKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM 798
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 776 IPLSYF--AKWQpANAPLSVNHQGLSAASTISFNLPtGKSLSDASAAIDRAMTQLgvPSTVrgSFAGTAQVFQETM--NS 851
Cdd:PRK15127 799 VPFSAFssSRWE-YGSPRLERYNGLPSMEILGQAAP-GKSTGEAMELMEELASKL--PTGV--GYDWTGMSYQERLsgNQ 872
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 852 QVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEA 931
Cdd:PRK15127 873 APALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDL 952
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 932 QRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVvylFFDRL 1011
Cdd:PRK15127 953 MDKEGKGLIEATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFVPV---FFVVV 1029
|
....*..
gi 1425910443 1012 RLRFSRK 1018
Cdd:PRK15127 1030 RRRFSRK 1036
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
15-1012 |
2.67e-86 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 300.52 E-value: 2.67e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 15 ILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQ 94
Cdd:TIGR00914 17 LLATLVMAILGIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLETTRSLSRYGLSQVTVI 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 95 FDFDRDINGAARDVQAAINAAQSLLPSGMpsRPTYRKANPSDAPIMILTLTSD---TYSQGELYDFA---STQ---LAPT 165
Cdd:TIGR00914 97 FKDGTDLYFARQLVNERLQQARDNLPEGV--SPEMGPISTGLGEIFLYTVEAEegaRKKDGGAYTLTdlrTIQdwiIRPQ 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 166 ISQIDGVADVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAEYQPLI 245
Cdd:TIGR00914 175 LRTVPGVAEVNSIGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIERRGEQYLVRAPGQVQSMDDIRNIV 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 246 IHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSP 325
Cdd:TIGR00914 255 IATGEGVPIRIRDVARVQIGKELRTGAATENGKEVVLGTVFMLIGENSRTVAQAVGDKLETINKTLPEGVEIVTTYDRSQ 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 326 TIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALtiATGFVVDDAIV 405
Cdd:TIGR00914 335 LVDAAIATVKKNLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGMVFQGISANLMSLGAL--DFGLIVDGAVV 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 406 VLENIARHLEAGM----------KPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISL 475
Cdd:TIGR00914 413 IVENAHRRLAEAQhhhgrqltlkERLHEVFAASREVRRPLIFGQLIITLVFLPIFTLTGVEGKMFHPMAFTVVLALAGAM 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 476 LVSLTLTPMMCGWMLKASKPREQKRLrgfgrmLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQ 555
Cdd:TIGR00914 493 ILSLTFVPAAVALFIRGKVAEKENRL------MRVLKRRYEPLLERVLAWPAVVLGAAAVSIVLVVWIASRVGGEFIPSL 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 556 DTGVL------MGGIQADQSISFQamrgklQDFMKIIRDDPAVDNVTGFTGGSRVNSGMM-------FITLKPRDERSE- 621
Cdd:TIGR00914 567 NEGDLayqalrIPGTSLAQSVAMQ------QTLEKLIKSFPEVARVFAKTGTAEIATDPMppnasdtYIILKPESQWPEg 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 622 --TAQQIIDRLRVKLAKEPG-ANLFLMAVQ---DIRVGGRQSNASYQytLLSDDLAALREWEPKIRKKLATLPELADVNS 695
Cdd:TIGR00914 641 kkTKEDLIEEIQEATVRIPGnNYEFTQPIQmrfNELISGVRSDVAVK--VFGDDLDDLDATAEKISAVLKGVPGAADVKV 718
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 696 DQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKA 775
Cdd:TIGR00914 719 EQTTGLPYLTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRLPESLRESPQALRQLPIPLPLSED 798
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 776 -----IPLSYFAKWQPANAPLSVNHQGLSAASTISFNL---PTGKSLSDASAAIDRamtQLGVPSTVRGSFAGTAQVFQE 847
Cdd:TIGR00914 799 arkqfIPLSDVADLRVSPGPNQISRENGKRRVVVSANVrgrDLGSFVDDAKKAIAE---QVKLPPGYWITWGGQFEQLQS 875
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 848 TMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDF 927
Cdd:TIGR00914 876 ATKRLQIVVPVTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAVLNGLVMISF 955
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 928 ---ALEAQRhgnlTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVV 1004
Cdd:TIGR00914 956 irkLLEEGP----SLDEAVYEGALTRVRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATLLTLFVLPAL 1031
|
....*...
gi 1425910443 1005 YLFFDRLR 1012
Cdd:TIGR00914 1032 YRLVHRRR 1039
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
327-1014 |
1.29e-23 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 107.64 E-value: 1.29e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 327 IRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVV 406
Cdd:COG1033 213 AEAIQSDLAIFFPLALLLILLLLFLFFRSLRGVLLPLLVVLLAVIWTLGLMGLLGIPLSPLTILVPPLLLAIGIDYGIHL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 407 LENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFlplLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMC 486
Cdd:COG1033 293 LNRYREERRKGLDKREALREALRKLGPPVLLTSLTTAIGF---LSLLFSDIPPIRDFGIVAAIGVLLAFLTSLTLLPALL 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 487 GWM-LKASKPREQKRLRGFGRMLVALqqgygksLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDtgvlmggiq 565
Cdd:COG1033 370 SLLpRPKPKTRRLKKPPELGRLLAKL-------ARFVLRRPKVILVVALVLAVVSLYGISRLKVEYDFEDY--------- 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 566 adqsisfqamrgkLQDFMKIIRDDPAVDNVTGftggsrvnsGMMFITLkprdersetaqqIIDrlrvklAKEPGANLflm 645
Cdd:COG1033 434 -------------LPEDSPIRQDLDFIEENFG---------GSDPLEV------------VVD------TGEPDGLK--- 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 646 avqdirvggrqsnasyqytllsdDLAALREWEpKIRKKLATLPELADVNSdqqdngaemnLVydrDTMARLgidvqaaNS 725
Cdd:COG1033 471 -----------------------DPEVLKEID-RLQDYLESLPEVGKVLS----------LA---DLVKEL-------NQ 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 726 LLNNafGQRQISTIyqPMNQYKVVMEVDPRYTQDISALEKMfvINNEGKAIPLSYFAKWQPANAplsvnhqglsaastis 805
Cdd:COG1033 507 ALNE--GDPKYYAL--PESRELLAQLLLLLSSPPGDDLSRF--VDEDYSAARVTVRLKDLDSEE---------------- 564
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 806 fnlptgksLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMN----SQVILIIAAIATVYIVLGILYESYVHPLTIL 881
Cdd:COG1033 565 --------IKALVEEVRAFLAENFPPDGVEVTLTGSAVLFAAINEsvieSQIRSLLLALLLIFLLLLLAFRSLRLGLISL 636
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 882 --STLPSAGVGALLAleLFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGnLTPQEAIFQACLLRFRPIMMTTL 959
Cdd:COG1033 637 ipNLLPILLTFGLMG--LLGIPLNIATAVVASIALGIGVDYTIHFLSRYREERRKG-GDLEEAIRRALRTTGKAILFTSL 713
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 1425910443 960 AALFGALPLVLSGGDGseLRQpLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLR 1014
Cdd:COG1033 714 TLAAGFGVLLFSSFPP--LAD-FGLLLALGLLVALLAALLLLPALLLLLDPRIAK 765
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
281-500 |
9.01e-16 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 82.22 E-value: 9.01e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 281 ILLMIRKLPEANIIQTVDSIRAKLPELQEtiPAAIDLQIAqDRSPTIRASLEEVEQTLIISVALVILVVFLFL----RSG 356
Cdd:COG1033 553 VTVRLKDLDSEEIKALVEEVRAFLAENFP--PDGVEVTLT-GSAVLFAAINESVIESQIRSLLLALLLIFLLLllafRSL 629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 357 RATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVL 436
Cdd:COG1033 630 RLGLISLIPNLLPILLTFGLMGLLGIPLNIATAVVASIALGIGVDYTIHFLSRYREERRKGGDLEEAIRRALRTTGKAIL 709
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1425910443 437 SMSLSLVAVFlplLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMlkasKPREQKR 500
Cdd:COG1033 710 FTSLTLAAGF---GVLLFSSFPPLADFGLLLALGLLVALLAALLLLPALLLLL----DPRIAKK 766
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
793-1020 |
4.12e-09 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 60.64 E-value: 4.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 793 VNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQL------GVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIV 866
Cdd:COG1033 155 VSPDGKATLIVVTLDPDPLSSDLDRKEVVAEIRAIIakyedpGVEVYLTGFPVLRGDIAEAIQSDLAIFFPLALLLILLL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 867 LGILYESyvhPLTILSTLPSAGVGALLAL---ELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGnLTPQEAI 943
Cdd:COG1033 235 LFLFFRS---LRGVLLPLLVVLLAVIWTLglmGLLGIPLSPLTILVPPLLLAIGIDYGIHLLNRYREERRKG-LDKREAL 310
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1425910443 944 FQACLLRFRPIMMTTLAALFGALPLVLSGgdgSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPK 1020
Cdd:COG1033 311 REALRKLGPPVLLTSLTTAIGFLSLLFSD---IPPIRDFGIVAAIGVLLAFLTSLTLLPALLSLLPRPKPKTRRLKK 384
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
154-499 |
8.99e-09 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 59.77 E-value: 8.99e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 154 LYDFAST--QLAPTISQIDGVADVDVGGSS-LPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQI- 229
Cdd:TIGR00914 693 LDDLDATaeKISAVLKGVPGAADVKVEQTTgLPYLTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIv 772
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 230 ----QTNDELKTAAEYQPLIIHYNNGGA---VRLGDVATVtDSVQDVRNAGMTNAKPAILLmirklpEAN-----IIQTV 297
Cdd:TIGR00914 773 irlpESLRESPQALRQLPIPLPLSEDARkqfIPLSDVADL-RVSPGPNQISRENGKRRVVV------SANvrgrdLGSFV 845
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 298 DSIRAKLPElQETIPAAIDL----QIAQDRSPTIRASLeeveqtlIISVALVILVVFLFLRSGRA--TIIPAVSVPVSLI 371
Cdd:TIGR00914 846 DDAKKAIAE-QVKLPPGYWItwggQFEQLQSATKRLQI-------VVPVTLLLIFVLLYAAFGNVkdALLVFTGIPFALT 917
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 372 GTFAAMYLCGFSlnnlslMALTIATGFV------VDDAIVVLENIARHLEAGMKPLQAALQGT----REVGFTVLSMSLS 441
Cdd:TIGR00914 918 GGVFALWLRGIP------LSISAAVGFIalsgvaVLNGLVMISFIRKLLEEGPSLDEAVYEGAltrvRPVLMTALVASLG 991
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1425910443 442 LVAVflplLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQK 499
Cdd:TIGR00914 992 FVPM----AIATGTGAEVQRPLATVVIGGIITATLLTLFVLPALYRLVHRRRHKGRKE 1045
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
295-631 |
9.43e-09 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 59.39 E-value: 9.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 295 QTVDSIRAKLPELQE-------TIPAAIDLQIAQdrsptirASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVP 367
Cdd:COG2409 132 EAVDALRDAVAAAPApgltvyvTGPAALAADLNE-------AFEEDLGRAELITLPVALVVLLLVFRSLVAALLPLLTAG 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 368 VSLIGTFAAMYLCGFSLNnLSLMALTIATGFV----VDDAIVVlenIARH---LEAGMKPLQA---ALQGTREV----GF 433
Cdd:COG2409 205 LAVGVALGLLALLAAFTD-VSSFAPNLLTMLGlgvgIDYALFL---VSRYreeLRAGEDREEAvarAVATAGRAvlfsGL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 434 TV----LSMSLSLVAVFlplllmgglpgrllREFAVTLSVAIGISLLVSLTLTPMMCG----WMLKASKPREQKRLRGFG 505
Cdd:COG2409 281 TVaialLGLLLAGLPFL--------------RSMGPAAAIGVAVAVLAALTLLPALLAllgrRVFWPRRPRRRRAAAPES 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 506 RMlvalqqgYGKSLKWVLNHTRLVGVV------LLGTIALNIWLYISIPKTF----------------FPEQDTGVLMGG 563
Cdd:COG2409 347 GF-------WRRLARAVVRRPVPVLVAavavllALALPALGLRLGLPDADSLpadspsrqgydalaehFPPGSNGPLTVV 419
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1425910443 564 IQADQSISfQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDE-RSETAQQIIDRLR 631
Cdd:COG2409 420 VESDDDLD-PADLAALDALAAALAAVPGVASVQPPTRPEGTDGDAARLQVVPDGDpDSPEAIDLVDRLR 487
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
816-1012 |
3.22e-08 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 57.54 E-value: 3.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 816 DASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLAL 895
Cdd:TIGR00921 159 DVERSLERTNPPSGKFLDVTGSPAINYDIEREFGKDMGTTMAISGILVVLVLLLDFKRWWRPLLPLVIILFGVAWVLGIM 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 896 ELFNAPFSLIALIGIMLLIGIVKKNAIMMVDfALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSggdG 975
Cdd:TIGR00921 239 GWLGIPLYATTLLAVPMLIGVGIDYGIQTLN-RYEEERDIGRAKGEAIVTAVRRTGRAVLIALLTTSAGFAALALS---E 314
|
170 180 190
....*....|....*....|....*....|....*..
gi 1425910443 976 SELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLR 1012
Cdd:TIGR00921 315 FPMVSEFGLGLVAGLITAYLLTLLVLPALLQSIDIGR 351
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
324-483 |
3.86e-07 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 54.07 E-value: 3.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 324 SPTIRASLEEVEQ-----TLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGF 398
Cdd:TIGR00921 180 SPAINYDIEREFGkdmgtTMAISGILVVLVLLLDFKRWWRPLLPLVIILFGVAWVLGIMGWLGIPLYATTLLAVPMLIGV 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 399 VVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFlplLLMGGLPGRLLREFAVTLSVAIGISLLVS 478
Cdd:TIGR00921 260 GIDYGIQTLNRYEEERDIGRAKGEAIVTAVRRTGRAVLIALLTTSAGF---AALALSEFPMVSEFGLGLVAGLITAYLLT 336
|
....*
gi 1425910443 479 LTLTP 483
Cdd:TIGR00921 337 LLVLP 341
|
|
| PRK13023 |
PRK13023 |
protein translocase subunit SecDF; |
292-502 |
3.95e-06 |
|
protein translocase subunit SecDF;
Pssm-ID: 171842 [Multi-domain] Cd Length: 758 Bit Score: 50.77 E-value: 3.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 292 NIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASL------------------EEVEQTLIISVALVILVV--FL 351
Cdd:PRK13023 216 NQVVSAPTVSGPLDTSELQIEGAFDLQAANNMAVVLRSGAlpqavtvleertiasalgEDYASAAVLAALLAALVVglFM 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 352 FLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREV 431
Cdd:PRK13023 296 VLSYGILGVIALVALVVNIIILTAVLSLIGASISLASIAGLVLTIGLAVDAHILIYERVREDRRKGYSVVQAMESGFYRA 375
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1425910443 432 GFTVLSMSLSlvaVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLR 502
Cdd:PRK13023 376 LSTIVDANLT---TLIAALVLFLLGSGTVHGFALTVAIGIGTTLFTTLTFTRLLIAQWVRTAKPKEVPKRR 443
|
|
| SecD |
COG0342 |
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular ... |
314-497 |
2.20e-04 |
|
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440111 [Multi-domain] Cd Length: 434 Bit Score: 44.72 E-value: 2.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 314 AIDLQIAQDR--SPT-----IRASLeeveQTLIISVALVILVVFLFLRsgRATIIPAVSVPVSLIGTFAAMYLCGFslnN 386
Cdd:COG0342 250 PAPLEIVEERtvGPTlgadsIEKGL----IAGLIGLLLVALFMLLYYR--LPGLVANIALALNVVLLLGVLSLLGA---T 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 387 LSL-----MALTIATGfvVDDAIVVLENIARHLEAGmKPLQAALqgtrEVGF-------------TVLSMS----LSLVA 444
Cdd:COG0342 321 LTLpgiagIILTIGMA--VDANVLIFERIREELRAG-RSLRAAI----EAGFkrafstildanvtTLIAAVvlfvLGTGP 393
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1425910443 445 VflplllmgglpgrllREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPRE 497
Cdd:COG0342 394 V---------------KGFAVTLILGILISMFTAVPVTRPLLNLLLGRRRLKK 431
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
312-501 |
4.29e-04 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 43.82 E-value: 4.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 312 PAAI--DLQIAQDRSPTIrasleeveqTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAM----YLCGFSLN 385
Cdd:pfam03176 129 PAATvaDLRDAGDRDLGL---------IEAVTLVVIFIILLIVYRSVVAALLPLLTVGLSLGAAQGLVailaHILGIGLS 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 386 NLS---LMALTIATGfvVDDAIVVLENIARHLEAGMKPLQAALQGTREVG-----------FTVLSMSLSLVAVFlplll 451
Cdd:pfam03176 200 TFAlnlLVVLLIAVG--TDYALFLVSRYREELRAGEDREEAVIRAVRGTGkvvtaagltvaIAMLALSFARLPVF----- 272
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1425910443 452 mgglpgrllREFAVTLSVAIGISLLVSLTLTPMMCG----WMLKASKPREQKRL 501
Cdd:pfam03176 273 ---------AQVGPTIAIGVLVDVLAALTLLPALLAllgrWGLWPPKRDRTARW 317
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
786-1019 |
1.80e-03 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 41.89 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 786 PANAPLSVNHQGLSAASTISFNLPTGKSLSDAS-AAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQ----VILIIAAI 860
Cdd:pfam03176 73 PDTAALFVSPDGKAAYVVVTLEGDPGTTEADESvAAVRDAVEQAPPPEGLKAYLTGPAATVADLRDAGdrdlGLIEAVTL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 861 ATVYIVLGILYESYVHPLTILSTLpSAGVGALLALELFNAPFSLIAL------IGIMLLIGIVKKNAIMMVDFALEAQRH 934
Cdd:pfam03176 153 VVIFIILLIVYRSVVAALLPLLTV-GLSLGAAQGLVAILAHILGIGLstfalnLLVVLLIAVGTDYALFLVSRYREELRA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 935 GnLTPQEAIFQAcllrfrpiMMTTLAALFGA--------LPLVLsggdgSELR--QPLGITIVGGLVMSQLLTLYTTPVV 1004
Cdd:pfam03176 232 G-EDREEAVIRA--------VRGTGKVVTAAgltvaiamLALSF-----ARLPvfAQVGPTIAIGVLVDVLAALTLLPAL 297
|
250
....*....|....*
gi 1425910443 1005 YLFFDRLRLRFSRKP 1019
Cdd:pfam03176 298 LALLGRWGLWPPKRD 312
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
329-641 |
2.51e-03 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 41.76 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 329 ASLEEVEQTL-------------IIS--VALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALT 393
Cdd:PRK13024 246 APLKIIESRSvgptlgqdaidagIIAgiIGFALIFLFMLVYYGLPGLIANIALLLYIFLTLGALSSLGAVLTLPGIAGLV 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 394 IATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSL-SLVA-----VFLPLLLmgglpgrllREFAVTL 467
Cdd:PRK13024 326 LGIGMAVDANVLIFERIKEELRKGKSLKKAFKKGFKNAFSTILDSNItTLIAaailfFFGTGPV---------KGFATTL 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 468 SVAIGISLLVSLTLTPMMCGWMLKaskpREQKRLRGFGR---MLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALniwly 544
Cdd:PRK13024 397 IIGILASLFTAVFLTRLLLELLVK----RGDKKPFLFGVkkkKIHNINEGVTIFDRIDFVKKRKWFLIFSIVLVI----- 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1425910443 545 ISIPKTFFPEQDTGV-LMGG----IQADQSISFQAMRGKLqdfmkiirDDPAVDNVTGFTGGSRVNSGMmfITLKPRDER 619
Cdd:PRK13024 468 AGIIIFFIFGLNLGIdFTGGtryeIRTDQPVDLEQVRADL--------KELGLGEVNIVTFGSDNNQVL--VRTYGILSD 537
|
330 340
....*....|....*....|...
gi 1425910443 620 SETAQQ-IIDRLRVKLAKEPGAN 641
Cdd:PRK13024 538 DEEADTeIVAKLKNALKNDKGGT 560
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
338-404 |
6.65e-03 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 40.61 E-value: 6.65e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1425910443 338 LIISVALVILVVFLFLRSGRATIIpaVSVPV--SLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAI 404
Cdd:COG4258 645 LLLALLLILLLLLLRLRSLRRALR--VLLPPllAVLLTLAILGLLGIPLNLFHLIALLLVLGIGIDYAL 711
|
|
| |
