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Conserved domains on  [gi|1442955680|ref|WP_115257118|]
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MULTISPECIES: DUF202 domain-containing protein [Citrobacter]

Protein Classification

DUF202 domain-containing protein( domain architecture ID 10496000)

DUF202 domain-containing protein similar to Escherichia coli inner membrane protein YidG

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF202 pfam02656
Domain of unknown function (DUF202); This family consists of hypothetical proteins some of ...
 12-72 5.15e-06

Domain of unknown function (DUF202); This family consists of hypothetical proteins some of which are putative membrane proteins. No functional information or experimental verification of function is known. This domain is around 100 amino acids long.


:

Pssm-ID: 396980  Cd Length: 68  Bit Score: 41.06  E-value: 5.15e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1442955680  12 DPGLQPERTSLAWFRTLLGYGALIALALKHNWH--QAGFLFWVSIGVLAIVAIIL----WRYTRSRN 72
Cdd:pfam02656   1 RDGLANERTFLAWLRTSLALIALGVALLRFFLHggPTGLALILGLILIVLGILTLlyglRRYLRRVR 67
 
Name Accession Description Interval E-value
DUF202 pfam02656
Domain of unknown function (DUF202); This family consists of hypothetical proteins some of ...
 12-72 5.15e-06

Domain of unknown function (DUF202); This family consists of hypothetical proteins some of which are putative membrane proteins. No functional information or experimental verification of function is known. This domain is around 100 amino acids long.


Pssm-ID: 396980  Cd Length: 68  Bit Score: 41.06  E-value: 5.15e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1442955680  12 DPGLQPERTSLAWFRTLLGYGALIALALKHNWH--QAGFLFWVSIGVLAIVAIIL----WRYTRSRN 72
Cdd:pfam02656   1 RDGLANERTFLAWLRTSLALIALGVALLRFFLHggPTGLALILGLILIVLGILTLlyglRRYLRRVR 67
 
Name Accession Description Interval E-value
DUF202 pfam02656
Domain of unknown function (DUF202); This family consists of hypothetical proteins some of ...
 12-72 5.15e-06

Domain of unknown function (DUF202); This family consists of hypothetical proteins some of which are putative membrane proteins. No functional information or experimental verification of function is known. This domain is around 100 amino acids long.


Pssm-ID: 396980  Cd Length: 68  Bit Score: 41.06  E-value: 5.15e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1442955680  12 DPGLQPERTSLAWFRTLLGYGALIALALKHNWH--QAGFLFWVSIGVLAIVAIIL----WRYTRSRN 72
Cdd:pfam02656   1 RDGLANERTFLAWLRTSLALIALGVALLRFFLHggPTGLALILGLILIVLGILTLlyglRRYLRRVR 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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