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Conserved domains on  [gi|1444981579|ref|WP_115597491|]
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amino acid permease [Corynebacterium amycolatum]

Protein Classification

amino acid permease( domain architecture ID 11435488)

amino acid permease facilitates the transport of amino acids; similar to Aspergillus nidulans proline-specific permease which is required for high-affinity proline transport

Gene Ontology:  GO:0016020|GO:0015171|GO:0003333

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
7-487 0e+00

Amino acid permease [Amino acid transport and metabolism];


:

Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 699.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   7 EETSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQ 86
Cdd:COG0833     1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  87 EYGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIK 166
Cdd:COG0833    81 TYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 167 VITVIVFLVLGVGMIFGILGGSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRT 246
Cdd:COG0833   161 VITVIAFIIVGLLMIFGIIGGHAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQ 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 247 IFWRILLFYIGAIAVIGFLIAYTDPnllnaaedNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLF 326
Cdd:COG0833   241 VFWRILLFYILAIFVIAALIPYTDA--------GVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLW 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 327 SLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQN 406
Cdd:COG0833   313 SLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQG 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 407 IPLDSLPYKANFFPAGAVLALIMCFFVVAGQALDPirtgeniFAILSPYLGIPVFVLLWFIHKKVTGSKLVDPATADMSR 486
Cdd:COG0833   393 GDLEDLKYKAPLFPFGPIFAFILCLIVIIGQAFDP-------EQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSP 465

                  .
gi 1444981579 487 E 487
Cdd:COG0833   466 E 466
 
Name Accession Description Interval E-value
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
7-487 0e+00

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 699.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   7 EETSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQ 86
Cdd:COG0833     1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  87 EYGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIK 166
Cdd:COG0833    81 TYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 167 VITVIVFLVLGVGMIFGILGGSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRT 246
Cdd:COG0833   161 VITVIAFIIVGLLMIFGIIGGHAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQ 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 247 IFWRILLFYIGAIAVIGFLIAYTDPnllnaaedNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLF 326
Cdd:COG0833   241 VFWRILLFYILAIFVIAALIPYTDA--------GVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLW 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 327 SLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQN 406
Cdd:COG0833   313 SLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQG 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 407 IPLDSLPYKANFFPAGAVLALIMCFFVVAGQALDPirtgeniFAILSPYLGIPVFVLLWFIHKKVTGSKLVDPATADMSR 486
Cdd:COG0833   393 GDLEDLKYKAPLFPFGPIFAFILCLIVIIGQAFDP-------EQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSP 465

                  .
gi 1444981579 487 E 487
Cdd:COG0833   466 E 466
PRK10836 PRK10836
lysine transporter; Provisional
4-477 0e+00

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 564.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   4 TQSEETSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPVPG 83
Cdd:PRK10836    1 MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  84 SFQEYGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFA 163
Cdd:PRK10836   81 SFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 164 TIKVITVIVFLVLGVGMIFGIL-GGSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPR 242
Cdd:PRK10836  161 LIKVTTVIVFIIVGVLMIIGIFkGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPR 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 243 AIRTIFWRILLFYIGAIAVIGFLIAYTDPNLLNAAEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVST 322
Cdd:PRK10836  241 AVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYAST 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 323 RMLFSLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCL 402
Cdd:PRK10836  321 RMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGY 400
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1444981579 403 KAQNIPLDSLPYKANFFPAGAVLALIMCFFVVAGQALDPIRTGE-NIFAILSPYLGIPVFVLLWFIHKKVTGSKLV 477
Cdd:PRK10836  401 VLQGHDLNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFLKDTiDWGGVAATYIGIPLFLIIWFGYKLIKGTHFV 476
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
17-480 5.29e-137

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 403.59  E-value: 5.29e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  17 QRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPV-PGSFQEYGRRYVSE 95
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  96 SFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKVITVIVFLV 175
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 176 LGVGMIFGILGGSSP-GFENWTTGDApFVNGGM-----GLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIFW 249
Cdd:TIGR00913 161 LSIILNCGGGPNHGYiGFRYWHDPGA-FAGGTIggrfkGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFW 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 250 RILLFYIGAIAVIGFLIAYTDPNLLNA-AEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSL 328
Cdd:TIGR00913 240 RILVFYILTLFLIGFLVPYNDPRLLSSsSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYAL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 329 ARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQNIP 408
Cdd:TIGR00913 320 AHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRS 399
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1444981579 409 LDSLPYKANFFPAGAVLALIMCFFVVAGQ---ALDPIrtGENIFAILSPYLGIPVFVLLWFIHKKVTGSKLVDPA 480
Cdd:TIGR00913 400 LDELPYKSQTGPYGSYYALFFNILILIAQgyvAFAPV--KFSAKSFFEAYLSLPIFIALYIGHKVYKRDKLIIKL 472
AA_permease pfam00324
Amino acid permease;
24-469 4.22e-119

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 357.40  E-value: 4.22e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  24 HLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQEYGRRYVSESFGFAMGW 103
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 104 NYWFNWAITVAAELVAAALVMRYW--FPDVPSI-VWSALFLAILFGLNALSARAFGEGEFWFATIKVITVIVFLVLGVGM 180
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYLwVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 181 IFGILGGSSPGFENWT--TGDAPFVNG-GMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIFWRILLFYIG 257
Cdd:pfam00324 161 LSGGNPNDGAIFRYLGdnGGKNNFPPGfGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 258 AIAVIGFLIAYTDPNLLNAAedNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSLARQGQAPRY 337
Cdd:pfam00324 241 SLLAIGLLVPWNDPGLLNDS--ASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKF 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 338 FGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQNIPLDSLPYKAN 417
Cdd:pfam00324 319 LKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKAP 398
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1444981579 418 FFPAGAVLALIMCFFVVAGQALDPIRTGENIFAILSP------YLGIPVFVLLWFIHK 469
Cdd:pfam00324 399 LGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKNWGAgsfaaaYLIVLLFLIILIGVK 456
 
Name Accession Description Interval E-value
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
7-487 0e+00

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 699.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   7 EETSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQ 86
Cdd:COG0833     1 SSGSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  87 EYGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIK 166
Cdd:COG0833    81 TYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIK 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 167 VITVIVFLVLGVGMIFGILGGSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRT 246
Cdd:COG0833   161 VITVIAFIIVGLLMIFGIIGGHAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQ 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 247 IFWRILLFYIGAIAVIGFLIAYTDPnllnaaedNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLF 326
Cdd:COG0833   241 VFWRILLFYILAIFVIAALIPYTDA--------GVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLW 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 327 SLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQN 406
Cdd:COG0833   313 SLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQG 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 407 IPLDSLPYKANFFPAGAVLALIMCFFVVAGQALDPirtgeniFAILSPYLGIPVFVLLWFIHKKVTGSKLVDPATADMSR 486
Cdd:COG0833   393 GDLEDLKYKAPLFPFGPIFAFILCLIVIIGQAFDP-------EQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSP 465

                  .
gi 1444981579 487 E 487
Cdd:COG0833   466 E 466
PRK10836 PRK10836
lysine transporter; Provisional
4-477 0e+00

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 564.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   4 TQSEETSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPVPG 83
Cdd:PRK10836    1 MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  84 SFQEYGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFA 163
Cdd:PRK10836   81 SFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 164 TIKVITVIVFLVLGVGMIFGIL-GGSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPR 242
Cdd:PRK10836  161 LIKVTTVIVFIIVGVLMIIGIFkGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPR 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 243 AIRTIFWRILLFYIGAIAVIGFLIAYTDPNLLNAAEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVST 322
Cdd:PRK10836  241 AVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYAST 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 323 RMLFSLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCL 402
Cdd:PRK10836  321 RMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGY 400
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1444981579 403 KAQNIPLDSLPYKANFFPAGAVLALIMCFFVVAGQALDPIRTGE-NIFAILSPYLGIPVFVLLWFIHKKVTGSKLV 477
Cdd:PRK10836  401 VLQGHDLNDLPYRSGFFPLGPIFAFVLCLIITLGQNYEAFLKDTiDWGGVAATYIGIPLFLIIWFGYKLIKGTHFV 476
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
5-470 1.35e-161

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 465.36  E-value: 1.35e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   5 QSEETSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGgALIAYALIGIMVWLVMQSLGEMAAYLPVPGS 84
Cdd:COG1113     2 STSAAASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPA-VLLSYLIAGLIVFLVMRALGEMAVANPVSGS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  85 FQEYGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFAT 164
Cdd:COG1113    81 FSDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 165 IKVITVIVFLVLGVGMI---FGILGGSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIP 241
Cdd:COG1113   161 IKVVAIVAFIVVGLLLIffgFGLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 242 RAIRTIFWRILLFYIGAIAVIGFLIAYTDPNLlnaaedniSISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVS 321
Cdd:COG1113   241 KAINSVIWRILLFYVGSLFVILALVPWNQIGA--------GGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYST 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 322 TRMLFSLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKC 401
Cdd:COG1113   313 SRMLYSLAERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRR 392
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1444981579 402 LKAQNIPldSLPYKANFFPAGAVLALIMCFFVVAGQALDPirtgENIFAILSPYLGIPVFVLLWFIHKK 470
Cdd:COG1113   393 LPREGAA--ALKFKMPGFPYTSYLTLAFLAAVLVLMAFDP----DTRIALIVGPVWLALLVVGYFLVRR 455
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
17-480 5.29e-137

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 403.59  E-value: 5.29e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  17 QRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPV-PGSFQEYGRRYVSE 95
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  96 SFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKVITVIVFLV 175
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 176 LGVGMIFGILGGSSP-GFENWTTGDApFVNGGM-----GLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIFW 249
Cdd:TIGR00913 161 LSIILNCGGGPNHGYiGFRYWHDPGA-FAGGTIggrfkGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFW 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 250 RILLFYIGAIAVIGFLIAYTDPNLLNA-AEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSL 328
Cdd:TIGR00913 240 RILVFYILTLFLIGFLVPYNDPRLLSSsSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYAL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 329 ARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQNIP 408
Cdd:TIGR00913 320 AHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKAQGRS 399
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1444981579 409 LDSLPYKANFFPAGAVLALIMCFFVVAGQ---ALDPIrtGENIFAILSPYLGIPVFVLLWFIHKKVTGSKLVDPA 480
Cdd:TIGR00913 400 LDELPYKSQTGPYGSYYALFFNILILIAQgyvAFAPV--KFSAKSFFEAYLSLPIFIALYIGHKVYKRDKLIIKL 472
AA_permease pfam00324
Amino acid permease;
24-469 4.22e-119

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 357.40  E-value: 4.22e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  24 HLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQEYGRRYVSESFGFAMGW 103
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 104 NYWFNWAITVAAELVAAALVMRYW--FPDVPSI-VWSALFLAILFGLNALSARAFGEGEFWFATIKVITVIVFLVLGVGM 180
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYLwVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 181 IFGILGGSSPGFENWT--TGDAPFVNG-GMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIFWRILLFYIG 257
Cdd:pfam00324 161 LSGGNPNDGAIFRYLGdnGGKNNFPPGfGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 258 AIAVIGFLIAYTDPNLLNAAedNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSLARQGQAPRY 337
Cdd:pfam00324 241 SLLAIGLLVPWNDPGLLNDS--ASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKF 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 338 FGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQNIPLDSLPYKAN 417
Cdd:pfam00324 319 LKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDELPFKAP 398
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1444981579 418 FFPAGAVLALIMCFFVVAGQALDPIRTGENIFAILSP------YLGIPVFVLLWFIHK 469
Cdd:pfam00324 399 LGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKNWGAgsfaaaYLIVLLFLIILIGVK 456
PRK11387 PRK11387
S-methylmethionine permease;
6-441 1.12e-113

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 343.37  E-value: 1.12e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   6 SEETSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGGALIAYALIGIMVWLVMQSLGEMAAYLPVPGSF 85
Cdd:PRK11387    2 PEPTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAF 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  86 QEYGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATI 165
Cdd:PRK11387   82 HVYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLI 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 166 KVITVIVFLVLGVGMIFGIL----GGSSPGFENwTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIP 241
Cdd:PRK11387  162 KVVTILAFIVLGGAAIFGFIpmqdGSPAPGLRN-LTAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 242 RAIRTIFWRILLFYIGAIAVIGFLIAytdpnllnAAEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVS 321
Cdd:PRK11387  241 VAIRTTIARLVIFFVGTVLVLAALIP--------MQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYAS 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 322 TRMLFSLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVgdgAAYTFLLTLSALAGF---ITWFGISFSHYRF 398
Cdd:PRK11387  313 GRMLWSLSNEGTLPACFARLTKRGIPLTALSVSMLGGLLALFSSVV---APDTVFVALSAISGFavvAVWLSICASHFMF 389
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 1444981579 399 RKCLKAQNIPLDSLPYKANFFPAGAVLALIMCFFVVAGQALDP 441
Cdd:PRK11387  390 RRRHLRDGKALSELAYRAPWYPLTPILGFVLCLLACVGLAFDP 432
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
10-409 9.87e-88

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 275.98  E-value: 9.87e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  10 SSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGgALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQEYG 89
Cdd:TIGR01773   4 SQSGLKLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPA-ALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  90 RRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKVIT 169
Cdd:TIGR01773  83 DDAIGRWAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIA 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 170 VIVFLVLGVGMIFGILGGSSP-GFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIF 248
Cdd:TIGR01773 163 IIAFIILGAVAIFGFAPGSEVsGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVI 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 249 WRILLFYIGAIAVIGFLIAYTDPNLlnaaednISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSL 328
Cdd:TIGR01773 243 WRIIVFYLGSIFIVVALLPWNSPNL-------LEVGSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSL 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 329 ARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQNIP 408
Cdd:TIGR01773 316 AERGDAPRVFMKLNKKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANGEA 395

                  .
gi 1444981579 409 L 409
Cdd:TIGR01773 396 I 396
PRK10238 PRK10238
aromatic amino acid transporter AroP;
8-441 1.01e-87

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 276.07  E-value: 1.01e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   8 ETSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGgALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQE 87
Cdd:PRK10238    2 EGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPG-IILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  88 YGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKV 167
Cdd:PRK10238   81 FAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 168 ITVIVFLVLGVGMIFGILGGSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTI 247
Cdd:PRK10238  161 IAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 248 FWRILLFYIGAIAVIGFLIAYTdpnllnaaEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFS 327
Cdd:PRK10238  241 IYRILIFYIGSLAVLLSLMPWT--------RVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFG 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 328 LARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQNI 407
Cdd:PRK10238  313 LAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGV 392
                         410       420       430
                  ....*....|....*....|....*....|....
gi 1444981579 408 pldSLPYKANFFPAGAVLALIMCFFVVAGQALDP 441
Cdd:PRK10238  393 ---VTRFPALLYPLGNWICLLFMAAVLVIMLMTP 423
PRK10249 PRK10249
phenylalanine transporter; Provisional
3-475 1.08e-87

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 276.10  E-value: 1.08e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   3 STQSEETSSHNH-KLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGgALIAYALIGIMVWLVMQSLGEMAAYLPV 81
Cdd:PRK10249    5 STVSEDTASNQEpTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPA-VLLGYGVAGIIAFLIMRQLGEMVVEEPV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  82 PGSFQEYGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFW 161
Cdd:PRK10249   84 SGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFW 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 162 FATIKVITVIVFLVLGVGMIFGILGGSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIP 241
Cdd:PRK10249  164 FALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIP 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 242 RAIRTIFWRILLFYIGAIAVIGFLIAYTdpnllnaaEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVS 321
Cdd:PRK10249  244 KAVNQVVYRILLFYIGSLVVLLALYPWV--------EVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSN 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 322 TRMLFSLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKC 401
Cdd:PRK10249  316 SRMLFGLSVQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAA 395
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1444981579 402 LKAQNiplDSLPYKANFFPAG-----AVLALIMCFFVvagqALDPIRtgenifaiLSPYLgIPVFVLLWFIHKKVTGSK 475
Cdd:PRK10249  396 MRRQG---RETQFKALLYPFGnylciAFLGMILLLMC----TMDDMR--------LSAIL-LPVWIVFLFVAFKTLRRK 458
PRK10746 PRK10746
putative transport protein YifK; Provisional
14-441 1.10e-84

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 268.61  E-value: 1.10e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  14 HKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGgALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQEYGRRYV 93
Cdd:PRK10746    6 PELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS-VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYM 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  94 SESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKVITVIVF 173
Cdd:PRK10746   85 SPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVM 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 174 LVLGVGMIFGILG--GSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIFWRI 251
Cdd:PRK10746  165 IVIGLGVIFFGFGngGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRI 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 252 LLFYIGAIAVIGFLIAYTdpnllnaaEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSLARQ 331
Cdd:PRK10746  245 LIFYVGAIFVIVTIFPWN--------EIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKN 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 332 GQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLV--GDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAqniPL 409
Cdd:PRK10746  317 RQLPAAMAKVSRHGVPVAGVAVSILILLVGSCLNYIipNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKA---AI 393
                         410       420       430
                  ....*....|....*....|....*....|..
gi 1444981579 410 DSLPYKANFFPAGAVLALIMCFFVVAGQALDP 441
Cdd:PRK10746  394 ASHPFRSILFPWANYLTMAFLICVLIGMYFNE 425
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
4-400 2.04e-77

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 249.65  E-value: 2.04e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   4 TQSEETSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGgALIAYALIGIMVWLVMQSLGEMAAYLPVPG 83
Cdd:PRK11049    6 VVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPS-IIFVYMIIGFMLFFVMRAMGELLLSNLEYK 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  84 SFQEYGRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFA 163
Cdd:PRK11049   85 SFSDFASDLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFA 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 164 TIKVITVIVFLVLGVGMI---FGILGGSSPGFEN-WTTGdAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERT 239
Cdd:PRK11049  165 MIKIVAIVALIVVGLVMVamhFQSPTGVEASFAHlWNDG-GMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKS 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 240 IPRAIRTIFWRILLFYIGAIAVIgflIAYTDPNLLNAAEdnisiSPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMY 319
Cdd:PRK11049  244 LPRAINSIPIRIIMFYVFALIVI---MSVTPWSSVVPDK-----SPFVELFVLVGLPAAASVINFVVLTSAASSANSGVF 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 320 VSTRMLFSLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAG-----FITSLVgdgAAYTFLLTLSALAGFITWFGISFS 394
Cdd:PRK11049  316 STSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGvvllyVNPSVI---GAFTLVTTVSAILFMFVWTIILCS 392

                  ....*.
gi 1444981579 395 HYRFRK 400
Cdd:PRK11049  393 YLVYRK 398
proY PRK10580
putative proline-specific permease; Provisional
13-435 2.65e-69

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 228.17  E-value: 2.65e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  13 NHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGgALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQEYGRRY 92
Cdd:PRK10580    4 KNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPS-VLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQEN 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  93 VSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKVITVIV 172
Cdd:PRK10580   83 LGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIII 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 173 FLVLGVGMIF-GILGGSSP-GFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIFWR 250
Cdd:PRK10580  163 MIVAGIGIIIwGIGNGGQPtGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMR 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 251 ILLFYIGAIAVIGFLIAYTdpnllnaaEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSLAR 330
Cdd:PRK10580  243 ILVFYVGTLFVIMSIYPWN--------QVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAE 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 331 QGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQNIPLD 410
Cdd:PRK10580  315 QGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKAL 394
                         410       420
                  ....*....|....*....|....*
gi 1444981579 411 SLPYKANFFPagAVLALIMCFFVVA 435
Cdd:PRK10580  395 KFKVPGGVAT--TIGGLIFLVFIIG 417
PRK15049 PRK15049
L-asparagine permease;
10-403 6.33e-64

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 215.25  E-value: 6.33e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  10 SSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGGALIaYALIGIMVWLVMQSLGEMAAYLPVPGSFQEYG 89
Cdd:PRK15049   20 NAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV-YLICGLFSFFILRALGELVLHRPSSGSFVSYA 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  90 RRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYW--FPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKV 167
Cdd:PRK15049   99 REFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKV 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 168 ITVIVFLVlgVGMIF----GILGGSSPGFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRA 243
Cdd:PRK15049  179 LAIVTFLV--VGTVFlgsgQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKA 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 244 IRTIFWRILLFYIGAIAVIGFLIAYtdpNLLNAAEdnisiSPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTR 323
Cdd:PRK15049  257 INSVIWRIGLFYVGSVVLLVMLLPW---SAYQAGQ-----SPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGR 328
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 324 MLFSLARQGQAPRYFGKLSGHGVPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLK 403
Cdd:PRK15049  329 ILRSMAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIK 408
PRK10197 PRK10197
GABA permease;
27-405 5.06e-53

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 184.83  E-value: 5.06e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  27 MIAIGGAIGTGLFVASGATISQAGPGgALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQEYGRRYVSESFGFAMGWNYW 106
Cdd:PRK10197    1 MLSIAGVIGASLFVGSSVAIAEAGPA-VLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYW 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 107 FNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKVITVIVFLVLGVGMIFGILG 186
Cdd:PRK10197   80 WFWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 187 GSSPGFENWTTGDAPFVNGGMG-LLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIFWRILLFYIGAIAVIGFL 265
Cdd:PRK10197  160 YAEVSGISRLWDSGGFMPNGFGaVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVAL 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 266 IAYTDPNLLnaaedniSISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSLARQGQAPRYFGKLSGHG 345
Cdd:PRK10197  240 IPWNMPGLK-------AVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSK 312
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 346 VPLRALIATAVIGMAGFITSLVGDGAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKAQ 405
Cdd:PRK10197  313 TPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE 372
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
9-434 3.02e-46

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 166.61  E-value: 3.02e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579   9 TSSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATISQAGPGgALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQEY 88
Cdd:COG0531     2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPA-AILAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  89 GRRYVSESFGFAMGWNYWFNWAITVAAELVAAALVMRYWFPDVPSIVWSALFLAILFGLNALSARAFGegefwfatiKVI 168
Cdd:COG0531    81 ARRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESA---------KVN 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 169 TVIVFLVLGVGMIFGILGGSSPGFENWTTgDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIF 248
Cdd:COG0531   152 NILTVLKLLVLLLFIVVGLFAFDPANFTP-FLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSL 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 249 WRILLFYIGAIAVIGFLIAYTDPNLLNAaednisisPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSL 328
Cdd:COG0531   231 LIVGVLYILVSLALTGVVPYDELAASGA--------PLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 329 ARQGQAPRYFGKLSG-HGVPLRALIATAVIGMAGFITSLvgdgAAYTFLLTLSALAGFITWFGISFSHYRFRKclkaqNI 407
Cdd:COG0531   303 ARDGLLPKVFAKVHPrFGTPVNAILLTGVIALLLLLLGA----ASFTALASLASVGVLLAYLLVALAVIVLRR-----RR 373
                         410       420
                  ....*....|....*....|....*..
gi 1444981579 408 PLDSLPYKAnFFPAGAVLALIMCFFVV 434
Cdd:COG0531   374 PDLPRPFRV-PLPLIPILGILLCLFLL 399
AA_permease_2 pfam13520
Amino acid permease;
28-437 2.15e-28

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 116.64  E-value: 2.15e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  28 IAIGGAIGTGLFVASGAtisqAGPGGALIAYALIGIMVWLVMQSL--GEMAAYLPVPGSFQEYGRRYVSESFGFAMGWNY 105
Cdd:pfam13520   9 LVIGSVIGSGIFVAPLV----ASGGPALIVWGWIAAIIFSLAVGLvyAELSSALPRSGGIYVYLENAFGKFVAFLAGWSN 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 106 WFNWAITVAAELVAAALVMRYWFP------DVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKVITVIVFLVLgVG 179
Cdd:pfam13520  85 WFAYVLGLASSASVAASYLLSALGpdlvptTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIII-LG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 180 MIFGILGGSSPGFENWTTgdaPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAedPERTIPRAIRTIFWRILLFYIGAI 259
Cdd:pfam13520 164 LVTADGGGFNLLSGEWHT---FFPDGWPGVFAGFLGVLWSFTGFESAANVSEEV--KKRNVPKAIFIGVIIVGVLYILVN 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 260 AVIGFLIaytdpNLLNAAEDNISISPFTLVFERAGIAIAAGLMNAVILTSVLSAGNSGMYVSTRMLFSLARQGQAP--RY 337
Cdd:pfam13520 239 IAFFGVV-----PDDEIALSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRF 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 338 FGKLSGHGVPLRALIATAVIGMAGFITSLVGDgAAYTFLLTLSALAGFITWFGISFSHYRFRKCLKaqNIPLDSLPYKAN 417
Cdd:pfam13520 314 FAKVNKFGSPIRAIILTAILSLILLLLFLLSP-AAYNALLSLSAYGYLLSYLLPIIGLLILRKKRP--DLGRIPGRWPVA 390
                         410       420
                  ....*....|....*....|
gi 1444981579 418 FFPAGAVLALIMCFFVVAGQ 437
Cdd:pfam13520 391 IFGILFSLFLIVALFFPPVG 410
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
10-385 5.84e-14

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 74.08  E-value: 5.84e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  10 SSHNHKLQRRLRARHLNMIAIGGAIGTGLFVASGATI-SQAGPgGALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQEY 88
Cdd:TIGR00906  20 SREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVArNDSGP-AIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLY 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  89 GRRYVSESFGFAMGWNYWFNWAITVAAELvaaalvmRYWFPDVPSIVWSAL--FLAILFGLNalsARAFGEGEFWFATIK 166
Cdd:TIGR00906  99 SYVTVGELWAFITGWNLILEYVIGTAAVA-------RSWSAYFDELLNKQIgqFRRTYFKLN---YDGLAEYPDFFAVCL 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 167 VITVIVFLVLGVG----------------MIFGILGGSSPG-FENWTTGDAPFVNGGM-----GLLAVFVVAGYSFQGTE 224
Cdd:TIGR00906 169 ILLLAVLLSFGVKesawvnkiftainilvLLFVIIAGFTKAdVANWSITEEKGAGGFMpygftGVLSGAATCFFAFIGFD 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 225 MVGVAAGEAEDPERTIPRAIRTIFWRILLFYIGAIAVIGFLIAY--TDPNllnaaednisiSPFTLVFERAGIAIAAGLM 302
Cdd:TIGR00906 249 AIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYylLDPD-----------APFPVAFEYVGWDPAKYIV 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 303 NAVILTSVLSAGNSGMYVSTRMLFSLARQGQAPRYFGKLSGH-GVPlraLIATAVIGMAGFITSLVGDGAAYTFLLTLSA 381
Cdd:TIGR00906 318 AVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINSKtKTP---INATVVSGAIAALMAFLFDLKALVDLLSIGT 394

                  ....
gi 1444981579 382 LAGF 385
Cdd:TIGR00906 395 LLAY 398
frlA PRK11357
amino acid permease;
16-389 2.03e-08

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 56.40  E-value: 2.03e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  16 LQRRLRARHLNMIAIGGAIGTGLFVASGATISQAG-PGGALIAYALIGIMVWLVMQSLGEMAAYLPVPGSFQEYGRRYVS 94
Cdd:PRK11357    6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGtPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  95 ESFGFAMGWNYWfnWAITVAAELVAAALVMRY--WFPDVPSIVWSALFLAILFGLNALSARAFGEGEFWFATIKVITVIV 172
Cdd:PRK11357   86 RPLAFLSGWASF--WANDAPSLSIMALAIVSNlgFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIP 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 173 FLVLGVGMIFGILGGSspgFENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRA-IRTIFWRI 251
Cdd:PRK11357  164 FTIVIGLGIFWFKAEN---FAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRAlIGSCLLVL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 252 LLFYIGAIAVIGFLiaytDPNLLNAAEDNIS--ISPFTLVFERAGIAIAagLMNAVILTSVLSagnSGMYVSTRMLFSLA 329
Cdd:PRK11357  241 VLYTLLALVISGLM----PFDKLANSETPISdaLTWIPALGSTAGIFVA--ITAMIVILGSLS---SCVMYQPRLEYAMA 311
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1444981579 330 RQGQAPRYFGKLS-GHGVPLRALIATAVIGMAG-FITSLVGDGAAYTFLLTLSALAGFITWF 389
Cdd:PRK11357  312 KDNLFFKCFGHVHpKYNTPDVSIILQGALGIFFiFVSDLTSLLGYFTLVMCFKNTLTFGSII 373
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
28-335 2.59e-08

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 56.29  E-value: 2.59e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579  28 IAIGGAIGTGLFVASGATISQAG-PGGALIAYALIGIMVWLVMQSLGEMAAYLPVPGSfqEYGrrYVSESFG----FAMG 102
Cdd:TIGR00911  52 IIVGTIIGSGIFVSPKGVLKNAGsVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGG--EYN--YILEVFGpllaFLRL 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 103 W--NYWFNWAITVAAELVAAALVMRYWFPDVPSIVW-----SALFLAILFGLNALSARAFGEGEFWFATIKVItvIVFLV 175
Cdd:TIGR00911 128 WieLLVIRPGSQAVNALNFAIYILTPVFPDCEVPEWairlvAVLCVLLLTLVNCLSVKWATRVQDIFTACKLL--ALLLI 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 176 LGVGMIFGILGG-SSPGFENWTTGDAPFVnggMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIRTIFWRILLF 254
Cdd:TIGR00911 206 IITGWVQLGKGGvESLNPKNAFEGTETSA---GGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFI 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 255 YIgaIAVIGFLIAYTDPNLLNAAEdnISISPFTLVFERAGIAIAaglmnAVILTSVLSAGNSGMYVSTRMLFSLARQGQA 334
Cdd:TIGR00911 283 YV--LTNIAYFTVLSPEELLASLA--VAVDFGERLLGVMSWAMP-----ALVGLSCFGSVNGSLFSSSRLFFVGGREGHL 353

                  .
gi 1444981579 335 P 335
Cdd:TIGR00911 354 P 354
PRK11021 PRK11021
putative transporter; Provisional
139-353 4.79e-07

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 51.83  E-value: 4.79e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 139 LFLAILFGLNALSARAFGEGEFwfatikVITVIVFLVlgVGMIFGiLGGSSPGFENWTTGDAPFVNGGMGLLAVfvvAGY 218
Cdd:PRK11021  121 LTLALLWLLNLRGASSSANLQT------VIALLIVAL--VVAIWW-AGDIKPADIPFPAPGSIEWSGLFAALGV---MFW 188
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 219 SFQGTEMVGVAAGEAEDPERTIPRAIRTIFWRILLFYIGAIAVIGFLIAYTDPNLLNAAEDNISISPF-TLVFERAGI-A 296
Cdd:PRK11021  189 CFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGDKQAAAASLPGIFVQLFgGYALWVICViG 268
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1444981579 297 IAAGLMNAVILTSVLSagnsgmyvstRMLFSLARQGQAPRYFGKLSGHGVPLRALIA 353
Cdd:PRK11021  269 YLACFASVNIYTQSFA----------RLVWSQAREGRPPSYLARLSARGVPVNALNA 315
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
192-357 8.60e-06

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 48.20  E-value: 8.60e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 192 FENWTTGDAPFVNGGMGLLAVFVVAGYSFQGTEMVGVAAGEAEDPERTIPRAIrtIFWRILLFYIGAIAVIGFLIAYTDP 271
Cdd:TIGR00907 202 FTNFNNSTGGWKPGGFAFLLGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAI--IGAVAIGIVTGFCFNIVLFFSMGDI 279
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444981579 272 N-LLNAAEDNISISPFTLVFERAGIAIAAGLmnaVILTSVLSAGNSGMYVSTRMLFSLARQGQAP--RYFGKLSGH-GVP 347
Cdd:TIGR00907 280 DsLISSTTGQPIAQIFYNALGNKAGAIFLLC---LILVTSFFCAITCMTANSRMIYAFSRDGGLPfsPLWSRVNPRtQVP 356
                         170
                  ....*....|
gi 1444981579 348 LRALIATAVI 357
Cdd:TIGR00907 357 LNAVWLSAVW 366
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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