|
Name |
Accession |
Description |
Interval |
E-value |
| PRK05759 |
PRK05759 |
F0F1 ATP synthase subunit B; Validated |
42-193 |
3.09e-26 |
|
F0F1 ATP synthase subunit B; Validated
Pssm-ID: 180240 [Multi-domain] Cd Length: 156 Bit Score: 98.31 E-value: 3.09e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 42 AEFIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAE 121
Cdd:PRK05759 5 GTLIGQLIAFLILVWFIMKFVWPPIMKALEERQKKIADGLAAAERAKKELELAQAKYEAQLAEARAEAAEIIEQAKKRAA 84
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1469895551 122 SERARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALeDDAEQKKLIERYIQE 193
Cdd:PRK05759 85 QIIEEAKAEAEAEAARIKAQAQAEIEQERKRAREELRKQVADLAVAGAEKILGREL-DAAAQSDLIDKLIAE 155
|
|
| AtpF |
COG0711 |
FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]; FoF1-type ... |
42-193 |
3.53e-26 |
|
FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit b or b' is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440475 [Multi-domain] Cd Length: 152 Bit Score: 97.94 E-value: 3.53e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 42 AEFIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAE 121
Cdd:COG0711 1 GTLFWQLINFLILVLLLKKFAWPPILKALDERQEKIADGLAEAERAKEEAEAALAEYEEKLAEARAEAAEIIAEARKEAE 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1469895551 122 SERARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALeDDAEQKKLIERYIQE 193
Cdd:COG0711 81 AIAEEAKAEAEAEAERIIAQAEAEIEQERAKALAELRAEVADLAVAIAEKILGKEL-DAAAQAALVDRFIAE 151
|
|
| ATP-synt_Fo_b |
cd06503 |
F-type ATP synthase, membrane subunit b; Membrane subunit b is a component of the Fo complex ... |
44-174 |
5.61e-26 |
|
F-type ATP synthase, membrane subunit b; Membrane subunit b is a component of the Fo complex of FoF1-ATP synthase. The F-type ATP synthases (FoF1-ATPase) consist of two structural domains: the F1 (assembly factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha (or A), beta (B), gamma (C), delta (D) and epsilon (E) subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons through the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Candidatus Methanoperedens.
Pssm-ID: 349951 [Multi-domain] Cd Length: 132 Bit Score: 96.74 E-value: 5.61e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 44 FIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESE 123
Cdd:cd06503 2 LIWQIINFLILLFILKKFLWKPILKALDEREEKIAESLEEAEKAKEEAEELLAEYEEKLAEARAEAQEIIEEARKEAEKI 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1469895551 124 RARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVG 174
Cdd:cd06503 82 KEEILAEAKEEAERILEQAKAEIEQEKEKALAELRKEVADLAVEAAEKILG 132
|
|
| ATP_synt_b |
TIGR01144 |
ATP synthase, F0 subunit b; This model describes the F1/F0 ATP synthase b subunit in bacteria ... |
48-193 |
5.84e-20 |
|
ATP synthase, F0 subunit b; This model describes the F1/F0 ATP synthase b subunit in bacteria only. Scoring just below the trusted cutoff are the N-terminal domains of Mycobacterial b/delta fusion proteins and a subunit from an archaeon, Methanosarcina barkeri, in which the ATP synthase homolog differs in architecture and is not experimentally confirmed. This model helps resolve b from the related b' subunit. Within the family is an example from a sodium-translocating rather than proton-translocating ATP synthase. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 130214 [Multi-domain] Cd Length: 147 Bit Score: 81.68 E-value: 5.84e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 48 LIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESERARI 127
Cdd:TIGR01144 2 LISFILLVWFCMKYVWPPLAKAIETRQKKIADGLASAERAKKEAALAQKKAQVILKEAKDEAQEIIENANKRGSEILEEA 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1469895551 128 IEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDAeQKKLIERYIQE 193
Cdd:TIGR01144 82 KAEAREEREKIKAQARAEIEAEKEQAREELRKQVADLSVLGAEKIIERNIDKQA-QKDLIDKLVAE 146
|
|
| ATP-synt_B |
pfam00430 |
ATP synthase B/B' CF(0); Part of the CF(0) (base unit) of the ATP synthase. The base unit is ... |
44-174 |
6.05e-12 |
|
ATP synthase B/B' CF(0); Part of the CF(0) (base unit) of the ATP synthase. The base unit is thought to translocate protons through membrane (inner membrane in mitochondria, thylakoid membrane in plants, cytoplasmic membrane in bacteria). The B subunits are thought to interact with the stalk of the CF(1) subunits. This domain should not be confused with the ab CF(1) proteins (in the head of the ATP synthase) which are found in pfam00006
Pssm-ID: 425677 [Multi-domain] Cd Length: 132 Bit Score: 60.40 E-value: 6.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 44 FIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESE 123
Cdd:pfam00430 2 LVTQLIAFLILVGVLIKFAWKPLGKVLDKRRELIADEIAEAEERRKDAAAALAEAEQQLKEARAEAQEIIENAKKRAEKL 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1469895551 124 RARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVG 174
Cdd:pfam00430 82 KEEIVAAAEAEAERIIEQAAAEIEQEKDRALAELRQQVVALAVQIAEKLLE 132
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK05759 |
PRK05759 |
F0F1 ATP synthase subunit B; Validated |
42-193 |
3.09e-26 |
|
F0F1 ATP synthase subunit B; Validated
Pssm-ID: 180240 [Multi-domain] Cd Length: 156 Bit Score: 98.31 E-value: 3.09e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 42 AEFIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAE 121
Cdd:PRK05759 5 GTLIGQLIAFLILVWFIMKFVWPPIMKALEERQKKIADGLAAAERAKKELELAQAKYEAQLAEARAEAAEIIEQAKKRAA 84
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1469895551 122 SERARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALeDDAEQKKLIERYIQE 193
Cdd:PRK05759 85 QIIEEAKAEAEAEAARIKAQAQAEIEQERKRAREELRKQVADLAVAGAEKILGREL-DAAAQSDLIDKLIAE 155
|
|
| AtpF |
COG0711 |
FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]; FoF1-type ... |
42-193 |
3.53e-26 |
|
FoF1-type ATP synthase, membrane subunit b or b' [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit b or b' is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440475 [Multi-domain] Cd Length: 152 Bit Score: 97.94 E-value: 3.53e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 42 AEFIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAE 121
Cdd:COG0711 1 GTLFWQLINFLILVLLLKKFAWPPILKALDERQEKIADGLAEAERAKEEAEAALAEYEEKLAEARAEAAEIIAEARKEAE 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1469895551 122 SERARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALeDDAEQKKLIERYIQE 193
Cdd:COG0711 81 AIAEEAKAEAEAEAERIIAQAEAEIEQERAKALAELRAEVADLAVAIAEKILGKEL-DAAAQAALVDRFIAE 151
|
|
| ATP-synt_Fo_b |
cd06503 |
F-type ATP synthase, membrane subunit b; Membrane subunit b is a component of the Fo complex ... |
44-174 |
5.61e-26 |
|
F-type ATP synthase, membrane subunit b; Membrane subunit b is a component of the Fo complex of FoF1-ATP synthase. The F-type ATP synthases (FoF1-ATPase) consist of two structural domains: the F1 (assembly factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha (or A), beta (B), gamma (C), delta (D) and epsilon (E) subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons through the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Candidatus Methanoperedens.
Pssm-ID: 349951 [Multi-domain] Cd Length: 132 Bit Score: 96.74 E-value: 5.61e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 44 FIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESE 123
Cdd:cd06503 2 LIWQIINFLILLFILKKFLWKPILKALDEREEKIAESLEEAEKAKEEAEELLAEYEEKLAEARAEAQEIIEEARKEAEKI 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1469895551 124 RARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVG 174
Cdd:cd06503 82 KEEILAEAKEEAERILEQAKAEIEQEKEKALAELRKEVADLAVEAAEKILG 132
|
|
| ATP_synt_b |
TIGR01144 |
ATP synthase, F0 subunit b; This model describes the F1/F0 ATP synthase b subunit in bacteria ... |
48-193 |
5.84e-20 |
|
ATP synthase, F0 subunit b; This model describes the F1/F0 ATP synthase b subunit in bacteria only. Scoring just below the trusted cutoff are the N-terminal domains of Mycobacterial b/delta fusion proteins and a subunit from an archaeon, Methanosarcina barkeri, in which the ATP synthase homolog differs in architecture and is not experimentally confirmed. This model helps resolve b from the related b' subunit. Within the family is an example from a sodium-translocating rather than proton-translocating ATP synthase. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 130214 [Multi-domain] Cd Length: 147 Bit Score: 81.68 E-value: 5.84e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 48 LIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESERARI 127
Cdd:TIGR01144 2 LISFILLVWFCMKYVWPPLAKAIETRQKKIADGLASAERAKKEAALAQKKAQVILKEAKDEAQEIIENANKRGSEILEEA 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1469895551 128 IEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDAeQKKLIERYIQE 193
Cdd:TIGR01144 82 KAEAREEREKIKAQARAEIEAEKEQAREELRKQVADLSVLGAEKIIERNIDKQA-QKDLIDKLVAE 146
|
|
| PRK14473 |
PRK14473 |
F0F1 ATP synthase subunit B; Provisional |
44-198 |
1.29e-18 |
|
F0F1 ATP synthase subunit B; Provisional
Pssm-ID: 172948 [Multi-domain] Cd Length: 164 Bit Score: 78.81 E-value: 1.29e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 44 FIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESE 123
Cdd:PRK14473 11 LIAQLINFLLLIFLLRTFLYRPVLNLLNERTRRIEESLRDAEKVREQLANAKRDYEAELAKARQEAAKIVAQAQERARAQ 90
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1469895551 124 RARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDAeQKKLIERYIQEAGSLN 198
Cdd:PRK14473 91 EAEIIAQARREAEKIKEEARAQAEQERQRMLSELKSQIADLVTLTASRVLGAELQARG-HDALIAESLAALGRRN 164
|
|
| PRK14471 |
PRK14471 |
F0F1 ATP synthase subunit B; Provisional |
35-194 |
2.15e-17 |
|
F0F1 ATP synthase subunit B; Provisional
Pssm-ID: 184695 [Multi-domain] Cd Length: 164 Bit Score: 75.60 E-value: 2.15e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 35 DILIPKMAEFIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVL 114
Cdd:PRK14471 2 DLLTPDFGLFFWQTILFLILLLLLAKFAWKPILGAVKEREDSIKNALASAEEARKEMQNLQADNERLLKEARAERDAILK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 115 EARKDAESERARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDAEQKKLIERYIQEA 194
Cdd:PRK14471 82 EAREIKEKMIADAKEEAQVEGDKMIEQAKASIESEKNAAMAEIKNQVANLSVEIAEKVLRKELSNKEKQHKLVEKMLGDV 161
|
|
| PRK14472 |
PRK14472 |
F0F1 ATP synthase subunit B; Provisional |
49-193 |
1.21e-16 |
|
F0F1 ATP synthase subunit B; Provisional
Pssm-ID: 172947 [Multi-domain] Cd Length: 175 Bit Score: 74.07 E-value: 1.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 49 IAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESERARII 128
Cdd:PRK14472 26 VTFVIVLLILKKIAWGPILSALEEREKGIQSSIDRAHSAKDEAEAILRKNRELLAKADAEADKIIREGKEYAEKLRAEIT 105
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1469895551 129 EAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDaEQKKLIERYIQE 193
Cdd:PRK14472 106 EKAHTEAKKMIASAKEEIEQEKRRALDVLRNEVADLAVKGAEKIIRTSLDAD-KQKKVVDSMIQD 169
|
|
| PRK13453 |
PRK13453 |
F0F1 ATP synthase subunit B; Provisional |
45-195 |
1.96e-13 |
|
F0F1 ATP synthase subunit B; Provisional
Pssm-ID: 184060 Cd Length: 173 Bit Score: 65.32 E-value: 1.96e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 45 IPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESER 124
Cdd:PRK13453 22 IVTVLTFIVLLALLKKFAWGPLKDVMDKRERDINRDIDDAEQAKLNAQKLEEENKQKLKETQEEVQKILEDAKVQARQQQ 101
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1469895551 125 ARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDaEQKKLIERYIQEAG 195
Cdd:PRK13453 102 EQIIHEANVRANGMIETAQSEINSQKERAIADINNQVSELSVLIASKVLRKEISEQ-DQKALVDKYLKEAG 171
|
|
| PRK13461 |
PRK13461 |
F0F1 ATP synthase subunit B; Provisional |
44-196 |
1.23e-12 |
|
F0F1 ATP synthase subunit B; Provisional
Pssm-ID: 184064 [Multi-domain] Cd Length: 159 Bit Score: 62.76 E-value: 1.23e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 44 FIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESE 123
Cdd:PRK13461 8 IIATIINFIILLLILKHFFFDKIKAVIDSRQSEIDNKIEKADEDQKKARELKLKNERELKNAKEEGKKIVEEYKSKAENV 87
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1469895551 124 RARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALeDDAEQKKLIERYIQEAGS 196
Cdd:PRK13461 88 YEEIVKEAHEEADLIIERAKLEAQREKEKAEYEIKNQAVDLAVLLSSKALEESI-DESEHRRLIKDFISKVGI 159
|
|
| ATP-synt_B |
pfam00430 |
ATP synthase B/B' CF(0); Part of the CF(0) (base unit) of the ATP synthase. The base unit is ... |
44-174 |
6.05e-12 |
|
ATP synthase B/B' CF(0); Part of the CF(0) (base unit) of the ATP synthase. The base unit is thought to translocate protons through membrane (inner membrane in mitochondria, thylakoid membrane in plants, cytoplasmic membrane in bacteria). The B subunits are thought to interact with the stalk of the CF(1) subunits. This domain should not be confused with the ab CF(1) proteins (in the head of the ATP synthase) which are found in pfam00006
Pssm-ID: 425677 [Multi-domain] Cd Length: 132 Bit Score: 60.40 E-value: 6.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 44 FIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESE 123
Cdd:pfam00430 2 LVTQLIAFLILVGVLIKFAWKPLGKVLDKRRELIADEIAEAEERRKDAAAALAEAEQQLKEARAEAQEIIENAKKRAEKL 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1469895551 124 RARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVG 174
Cdd:pfam00430 82 KEEIVAAAEAEAERIIEQAAAEIEQEKDRALAELRQQVVALAVQIAEKLLE 132
|
|
| PRK13428 |
PRK13428 |
F0F1 ATP synthase subunit delta; Provisional |
41-193 |
1.04e-11 |
|
F0F1 ATP synthase subunit delta; Provisional
Pssm-ID: 184048 [Multi-domain] Cd Length: 445 Bit Score: 62.83 E-value: 1.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 41 MAEFIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEktkqEAIAKRAESDSI----VTDARRQAADIVLEA 116
Cdd:PRK13428 1 MSTFIGQLIGFAVIVFLVWRFVVPPVRRLMAARQDTVRQQLAESA----TAADRLAEADQAhtkaVEDAKAEAARVVEEA 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1469895551 117 RKDAESERARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDAEQKKLIERYIQE 193
Cdd:PRK13428 77 REDAERIAEQLRAQADAEAERIKVQGARQVQLLRAQLTRQLRLELGHESVRQAGELVRNHVADPAQQSATVDRFLDE 153
|
|
| PRK13460 |
PRK13460 |
F0F1 ATP synthase subunit B; Provisional |
31-199 |
2.09e-11 |
|
F0F1 ATP synthase subunit B; Provisional
Pssm-ID: 139585 [Multi-domain] Cd Length: 173 Bit Score: 60.04 E-value: 2.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 31 AAGVDILIPKMAEFIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAA 110
Cdd:PRK13460 6 AKGLSLLDVNPGLVVWTLVTFLVVVLVLKKFAWDVILKALDERASGVQNDINKASELRLEAEALLKDYEARLNSAKDEAN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 111 DIVLEARKDAESERARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDaEQKKLIERY 190
Cdd:PRK13460 86 AIVAEAKSDALKLKNKLLEETNNEVKAQKDQAVKEIELAKGKALSQLQNQIVEMTITIASKVLEKQLKKE-DYKAFIETE 164
|
....*....
gi 1469895551 191 IQEAGSLNA 199
Cdd:PRK13460 165 LAKLGKLSA 173
|
|
| PRK13455 |
PRK13455 |
F0F1 ATP synthase subunit B; Provisional |
31-196 |
1.17e-07 |
|
F0F1 ATP synthase subunit B; Provisional
Pssm-ID: 184062 [Multi-domain] Cd Length: 184 Bit Score: 49.80 E-value: 1.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 31 AAGVDILIPKMAEFIpALIAFLIIWIVLAKVALPGIMKTM-EERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQA 109
Cdd:PRK13455 17 AAGGPFFSLSNTDFV-VTLAFLLFIGILVYFKVPGMIGGMlDKRAEGIRSELEEARALREEAQTLLASYERKQREVQEQA 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 110 ADIVLEARKDAESErariIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDD---AEQKKL 186
Cdd:PRK13455 96 DRIVAAAKDEAQAA----AEQAKADLEASIARRLAAAEDQIASAEAAAVKAVRDRAVSVAVAAAADVIAKQmtaADANAL 171
|
170
....*....|
gi 1469895551 187 IERYIQEAGS 196
Cdd:PRK13455 172 IDEAIKEVEA 181
|
|
| PRK09173 |
PRK09173 |
F0F1 ATP synthase subunit B; Validated |
47-193 |
2.68e-07 |
|
F0F1 ATP synthase subunit B; Validated
Pssm-ID: 169691 [Multi-domain] Cd Length: 159 Bit Score: 48.20 E-value: 2.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 47 ALIAFLIIWIVLAKVALPGIM-KTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESera 125
Cdd:PRK09173 7 AFVGLVLFLALVVYLKVPGMIaRSLDARADRIKNELAEARRLREEAQQLLAEYQRKRKEAEKEAADIVAAAEREAEA--- 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1469895551 126 rIIEAAHKEAEEIIAKAHTTVEDERKSIYAGA----ASSIADLSVAVATKIVGEALeDDAEQKKLIERYIQE 193
Cdd:PRK09173 84 -LTAEAKRKTEEYVARRNKLAEQKIAQAETDAinavRSSAVDLAIAAAEKLLAEKV-DAKAASELFKDALAQ 153
|
|
| PRK06231 |
PRK06231 |
F0F1 ATP synthase subunit B; Validated |
34-193 |
5.15e-07 |
|
F0F1 ATP synthase subunit B; Validated
Pssm-ID: 180481 [Multi-domain] Cd Length: 205 Bit Score: 48.30 E-value: 5.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 34 VDILIPKMAEFIPALIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIV 113
Cdd:PRK06231 41 INELFPNFWVFIAHLIAFSILLLLGIFLFWKPTQRFLNKRKELIEAEINQANELKQQAQQLLENAKQRHENALAQAKEII 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 114 LEARKDAESERARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALeDDAEQKKLIERYIQE 193
Cdd:PRK06231 121 DQANYEALQLKSELEKEANRQANLIIFQARQEIEKERRELKEQLQKESVELAMLAAEELIKKKV-DREDDDKLVDEFIRE 199
|
|
| PRK09174 |
PRK09174 |
F0F1 ATP synthase subunit B; |
49-183 |
1.50e-06 |
|
F0F1 ATP synthase subunit B;
Pssm-ID: 169692 [Multi-domain] Cd Length: 204 Bit Score: 46.71 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 49 IAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESErariI 128
Cdd:PRK09174 61 ITFGLFYLFMSRVILPRIGGIIETRRDRIAQDLDQAARLKQEADAAVAAYEQELAQARAKAHSIAQAAREAAKAK----A 136
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1469895551 129 EAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDAEQ 183
Cdd:PRK09174 137 EAERAAIEASLEKKLKEAEARIAAIKAKAMADVGSIAEETAAAIVEQLIGGTADK 191
|
|
| PRK07353 |
PRK07353 |
F0F1 ATP synthase subunit B'; Validated |
49-176 |
1.99e-06 |
|
F0F1 ATP synthase subunit B'; Validated
Pssm-ID: 235999 [Multi-domain] Cd Length: 140 Bit Score: 45.38 E-value: 1.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 49 IAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESERARII 128
Cdd:PRK07353 13 VQFVLLTFILNALFYKPVGKVVEEREDYIRTNRAEAKERLAEAEKLEAQYEQQLASARKQAQAVIAEAEAEADKLAAEAL 92
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1469895551 129 EAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEA 176
Cdd:PRK07353 93 AEAQAEAQASKEKARREIEQQKQAALAQLEQQVDALSRQILEKLLAAK 140
|
|
| PRK13454 |
PRK13454 |
F0F1 ATP synthase subunit B'; Provisional |
48-173 |
3.53e-06 |
|
F0F1 ATP synthase subunit B'; Provisional
Pssm-ID: 184061 [Multi-domain] Cd Length: 181 Bit Score: 45.59 E-value: 3.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 48 LIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESErari 127
Cdd:PRK13454 38 LVTLVAIYFVLTRVALPRIGAVLAERQGTITNDLAAAEELKQKAVEAEKAYNKALADARAEAQRIVAETRAEIQAE---- 113
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1469895551 128 IEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIV 173
Cdd:PRK13454 114 LDVAIAKADAEIAAKAAESEKRIAEIRAGALESVEEVAKDTAEALV 159
|
|
| PRK07352 |
PRK07352 |
F0F1 ATP synthase subunit B; Validated |
47-195 |
1.61e-05 |
|
F0F1 ATP synthase subunit B; Validated
Pssm-ID: 180941 [Multi-domain] Cd Length: 174 Bit Score: 43.41 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 47 ALIAFLIIWivlakvALPGIM-KTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESERA 125
Cdd:PRK07352 30 AIVIGLLYY------FGRGFLgKILEERREAILQALKEAEERLRQAAQALAEAQQKLAQAQQEAERIRADAKARAEAIRA 103
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 126 RIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDAeQKKLIERYIQEAG 195
Cdd:PRK07352 104 EIEKQAIEDMARLKQTAAADLSAEQERVIAQLRREAAELAIAKAESQLPGRLDEDA-QQRLIDRSIANLG 172
|
|
| PRK14474 |
PRK14474 |
F0F1 ATP synthase subunit B; Provisional |
48-197 |
2.52e-05 |
|
F0F1 ATP synthase subunit B; Provisional
Pssm-ID: 184696 [Multi-domain] Cd Length: 250 Bit Score: 43.65 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 48 LIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESERARI 127
Cdd:PRK14474 12 IINFLILVYLLRRFLYKPIIQVMKKRQQRIANRWQDAEQRQQEAGQEAERYRQKQQSLEQQRASFMAQAQEAADEQRQHL 91
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 128 IEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVGEALEDDAEQkKLIERYIQEAGSL 197
Cdd:PRK14474 92 LNEAREDVATARDEWLEQLEREKQEFFKALQQQTGQQMVKIIRAALADLANATLEQ-QIVGIFIARLEHL 160
|
|
| atpG |
CHL00118 |
ATP synthase CF0 B' subunit; Validated |
49-174 |
3.42e-04 |
|
ATP synthase CF0 B' subunit; Validated
Pssm-ID: 214369 [Multi-domain] Cd Length: 156 Bit Score: 39.58 E-value: 3.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 49 IAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEA--IAKRAESDsiVTDARRQAADIVLEARKDAESERAR 126
Cdd:CHL00118 30 LQFLLLMVLLNIILYKPLLKVLDERKEYIRKNLTKASEILAKAneLTKQYEQE--LSKARKEAQLEITQSQKEAKEIVEN 107
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1469895551 127 IIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVG 174
Cdd:CHL00118 108 ELKQAQKYIDSLLNEATKQLEAQKEKALKSLEEQVDTLSDQIEEKLLI 155
|
|
| NtpE |
COG1390 |
Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]; Archaeal ... |
95-194 |
3.81e-04 |
|
Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 [Energy production and conversion]; Archaeal/vacuolar-type H+-ATPase subunit E/Vma4 is part of the Pathway/BioSystem: A/V-type ATP synthase
Pssm-ID: 441000 [Multi-domain] Cd Length: 196 Bit Score: 39.93 E-value: 3.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 95 RAESDSIVTDARRQAADIVLEARKDAESERARIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKIVg 174
Cdd:COG1390 16 EAEAEEILEEAEEEAEKILEEAEEEAEEIKEEILEKAEREAEREKRRIISSAELEARKELLEAKEELIEEVFEEALEKL- 94
|
90 100
....*....|....*....|
gi 1469895551 175 EALEDDAEQKKLIERYIQEA 194
Cdd:COG1390 95 KNLPKDPEYKELLKKLLKEA 114
|
|
| PRK08476 |
PRK08476 |
F0F1 ATP synthase subunit B'; Validated |
48-136 |
9.55e-04 |
|
F0F1 ATP synthase subunit B'; Validated
Pssm-ID: 181442 [Multi-domain] Cd Length: 141 Bit Score: 38.13 E-value: 9.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 48 LIAFLIIWIVLAKVALPGIMKTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESERARI 127
Cdd:PRK08476 14 FVVFLLLIVILNSWLYKPLLKFMDNRNASIKNDLEKVKTNSSDVSEIEHEIETILKNAREEANKIRQKAIAKAKEEAEKK 93
|
....*....
gi 1469895551 128 IEAAHKEAE 136
Cdd:PRK08476 94 IEAKKAELE 102
|
|
| PRK01558 |
PRK01558 |
V-type ATP synthase subunit E; Provisional |
102-172 |
4.14e-03 |
|
V-type ATP synthase subunit E; Provisional
Pssm-ID: 179302 Cd Length: 198 Bit Score: 36.66 E-value: 4.14e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1469895551 102 VTDARRQAADIVLEARKDAEseraRIIEAAHKEAEEIIAKAHTTVEDERKSIYAGAASSIADLSVAVATKI 172
Cdd:PRK01558 17 LEEAERLANEIILEAKEEAE----EIIAKAEEEAKELKAKAEKEANDYKRHALEASRQAGRDLLISFEKSI 83
|
|
| fliH |
PRK06669 |
flagellar assembly protein H; Validated |
75-182 |
5.05e-03 |
|
flagellar assembly protein H; Validated
Pssm-ID: 235850 [Multi-domain] Cd Length: 281 Bit Score: 36.92 E-value: 5.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 75 KKIEESLDEAektKQEAIAKRAESDSIVTDARRQAAdivlEARKDAESERARIIEAAHKEA----------------EEI 138
Cdd:PRK06669 70 EIVEAAEEEA---KEELLKKTDEASSIIEKLQMQIE----REQEEWEEELERLIEEAKAEGyeegyekgreegleevREL 142
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1469895551 139 IAKAHTTVE---DERKSIYAGAASSIADLSVAVATKIVGEALEDDAE 182
Cdd:PRK06669 143 IEQLNKIIEkliKKREEILESSEEEIVELALDIAKKVIKEISENSKE 189
|
|
| PRK02292 |
PRK02292 |
V-type ATP synthase subunit E; Provisional |
99-149 |
5.12e-03 |
|
V-type ATP synthase subunit E; Provisional
Pssm-ID: 235026 [Multi-domain] Cd Length: 188 Bit Score: 36.51 E-value: 5.12e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1469895551 99 DSIVTDARRQAADIVLEARKDAESERARIIEAAHKEAEEIIAKAHTTVEDE 149
Cdd:PRK02292 4 ETVVEDIRDEARARASEIRAEADEEAEEIIAEAEADAEEILEDREAEAERE 54
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
68-194 |
5.56e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 37.43 E-value: 5.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 68 KTMEERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDArrQAADIVLEARKDAESERARIIEAAHKEAEEiIAKAhttve 147
Cdd:PTZ00121 1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEA--EAAEEKAEAAEKKKEEAKKKADAAKKKAEE-KKKA----- 1393
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1469895551 148 DERKSIYAGAASSIADLSVAVATKIVGEALEDDAEQKKLIERYIQEA 194
Cdd:PTZ00121 1394 DEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKA 1440
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
71-197 |
6.89e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 36.84 E-value: 6.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1469895551 71 EERGKKIEESLDEAEKTKQEAIAKRAESDSIVTDARRQAADIVLEARKDAESERARIIEAAHKEAEEIIAKAHTTVEDER 150
Cdd:COG1196 336 EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLER 415
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1469895551 151 KSIYAGAASSIADLSVAVATKIVGEALEDDAEQKKLIERYIQEAGSL 197
Cdd:COG1196 416 LERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL 462
|
|
| |
