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Conserved domains on  [gi|1475491739|ref|WP_118835421|]
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single-stranded DNA-binding protein, partial [Escherichia coli]

Protein Classification

single stranded DNA-binding domain-containing protein( domain architecture ID 489)

single stranded DNA-binding domain-containing protein may bind preferentially to single-stranded DNA

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RPA_2b-aaRSs_OBF_like super family cl09930
Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with ...
1-71 6.80e-53

Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.; This superfamily includes two oligonucleotide/oligosaccharide binding fold (OBF) domain families. One of these contains the OBF domains of the large (RPA1, 70kDa), middle (RPA2, RPA4, 32kDa) and small (RPA3, 14 kDa) subunits of human heterotrimeric Replication protein A (RPA), and similar domains. RPA is a nuclear single-strand (ss) DNA-binding protein involved in most aspects of DNA metabolism. This family includes the four OBF domains of RPA1 [DNA-binding domain (DBD)-A, DBD-B, DBD-C, and RPA1N], the OBF domain of RPA2 (RPA2 DBD-D), RPA3, and the OBF domain of RPA4. The major DNA binding activity of human RPA and Saccharomyces cerevisiae RPA appears to be associated with DBD-A and -B, of RPA1. RPA1 DBD-C shows only weak ssDNA-binding activity and is involved in trimerization. The other OBF domain family in this superfamily is the N-terminal, anticodon recognition domain of class 2b aminoacyl-tRNA synthetases (aaRSs). aaRSs catalyze the specific attachment of amino acids to their cognate tRNAs during protein biosynthesis. Class 2b aaRSs include the homodimeric aspartyl-, asparaginyl-, and lysyl-tRNA synthetases.


The actual alignment was detected with superfamily member PRK13732:

Pssm-ID: 471953 [Multi-domain]  Cd Length: 175  Bit Score: 161.82  E-value: 6.80e-53
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1475491739   1 MAVCGINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK13732    1 MAVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAEVAGEY 71
 
Name Accession Description Interval E-value
PRK13732 PRK13732
single-stranded DNA-binding protein; Provisional
1-71 6.80e-53

single-stranded DNA-binding protein; Provisional


Pssm-ID: 184284 [Multi-domain]  Cd Length: 175  Bit Score: 161.82  E-value: 6.80e-53
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1475491739   1 MAVCGINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK13732    1 MAVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAEVAGEY 71
ssb TIGR00621
single stranded DNA-binding protein (ssb); All proteins in this family for which functions are ...
5-71 4.91e-36

single stranded DNA-binding protein (ssb); All proteins in this family for which functions are known are single-stranded DNA binding proteins that function in many processes including transcription, repair, replication and recombination. Members encoded between genes for ribosomal proteins S6 and S18 should be annotated as primosomal protein N (PriB). Forms in gamma-protoeobacteria are much shorter and poorly recognized by this model. Additional members of this family include phage proteins. Eukaryotic members are organellar proteins. [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273179 [Multi-domain]  Cd Length: 164  Bit Score: 118.68  E-value: 4.91e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1475491739   5 GINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQtGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:TIGR00621   3 MVNKVILVGRLTRDPELRYTPSGNAVANFTLATNRRWKDQD-GEWKEETEWHDIVIFGRLAEVAAQY 68
Ssb COG0629
Single-stranded DNA-binding protein [Replication, recombination and repair];
6-71 2.91e-31

Single-stranded DNA-binding protein [Replication, recombination and repair];


Pssm-ID: 440394  Cd Length: 116  Bit Score: 104.92  E-value: 2.91e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDkQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:COG0629     1 MNKVTLVGRLGKDPELRYTPSGTAVANFRLAVNRRYKD-QDGEWKDETDWHRVVAWGKLAENAAEY 65
SSB pfam00436
Single-strand binding protein family; This family includes single stranded binding proteins ...
6-71 1.20e-25

Single-strand binding protein family; This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.


Pssm-ID: 425680  Cd Length: 103  Bit Score: 90.37  E-value: 1.20e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKelTEWHRVVLFGKLAEVAGEY 71
Cdd:pfam00436   1 MNKVILVGRLTRDPELRYTPNGNAVANFTLATNRRFKDRGEGDEE--TDFHRVVVFGKLAEVAAQY 64
SSB_OBF cd04496
SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs ...
9-71 4.44e-22

SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.


Pssm-ID: 239942  Cd Length: 100  Bit Score: 81.12  E-value: 4.44e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1475491739   9 VVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKqtGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:cd04496     1 VILIGRLGKDPELRYTPSGTPVARFSLAVNRRRKDR--DEEEEETDWIRVVAFGKLAENAAKY 61
 
Name Accession Description Interval E-value
PRK13732 PRK13732
single-stranded DNA-binding protein; Provisional
1-71 6.80e-53

single-stranded DNA-binding protein; Provisional


Pssm-ID: 184284 [Multi-domain]  Cd Length: 175  Bit Score: 161.82  E-value: 6.80e-53
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1475491739   1 MAVCGINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK13732    1 MAVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTEWHRVVLFGKLAEVAGEY 71
PRK09010 PRK09010
single-stranded DNA-binding protein; Provisional
1-71 9.57e-48

single-stranded DNA-binding protein; Provisional


Pssm-ID: 236362 [Multi-domain]  Cd Length: 177  Bit Score: 148.84  E-value: 9.57e-48
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1475491739   1 MAVCGINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK09010    1 MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMKEQTEWHRVVLFGKLAEVAGEY 71
PRK05733 PRK05733
single-stranded DNA-binding protein; Provisional
5-71 6.56e-41

single-stranded DNA-binding protein; Provisional


Pssm-ID: 235585 [Multi-domain]  Cd Length: 172  Bit Score: 131.20  E-value: 6.56e-41
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1475491739   5 GINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK05733    4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTEWHRVSLFGKVAEIAGEY 70
PRK06863 PRK06863
single-stranded DNA-binding protein; Provisional
1-71 3.82e-37

single-stranded DNA-binding protein; Provisional


Pssm-ID: 136097 [Multi-domain]  Cd Length: 168  Bit Score: 121.61  E-value: 3.82e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1475491739   1 MAvcGINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK06863    1 MA--GINKVIIVGHLGNDPEIRTMPNGEAVANISVATSESWTDKNTGERREVTEWHRIVFYRRQAEVAGEY 69
ssb TIGR00621
single stranded DNA-binding protein (ssb); All proteins in this family for which functions are ...
5-71 4.91e-36

single stranded DNA-binding protein (ssb); All proteins in this family for which functions are known are single-stranded DNA binding proteins that function in many processes including transcription, repair, replication and recombination. Members encoded between genes for ribosomal proteins S6 and S18 should be annotated as primosomal protein N (PriB). Forms in gamma-protoeobacteria are much shorter and poorly recognized by this model. Additional members of this family include phage proteins. Eukaryotic members are organellar proteins. [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 273179 [Multi-domain]  Cd Length: 164  Bit Score: 118.68  E-value: 4.91e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1475491739   5 GINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQtGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:TIGR00621   3 MVNKVILVGRLTRDPELRYTPSGNAVANFTLATNRRWKDQD-GEWKEETEWHDIVIFGRLAEVAAQY 68
PRK06958 PRK06958
single-stranded DNA-binding protein; Provisional
6-71 2.51e-33

single-stranded DNA-binding protein; Provisional


Pssm-ID: 180777 [Multi-domain]  Cd Length: 182  Bit Score: 112.20  E-value: 2.51e-33
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK06958    4 VNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGEFKEATEWHRVAFFGRLAEIVGEY 69
Ssb COG0629
Single-stranded DNA-binding protein [Replication, recombination and repair];
6-71 2.91e-31

Single-stranded DNA-binding protein [Replication, recombination and repair];


Pssm-ID: 440394  Cd Length: 116  Bit Score: 104.92  E-value: 2.91e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDkQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:COG0629     1 MNKVTLVGRLGKDPELRYTPSGTAVANFRLAVNRRYKD-QDGEWKDETDWHRVVAWGKLAENAAEY 65
PRK06341 PRK06341
single-stranded DNA-binding protein; Provisional
6-71 1.64e-26

single-stranded DNA-binding protein; Provisional


Pssm-ID: 235782 [Multi-domain]  Cd Length: 166  Bit Score: 94.48  E-value: 1.64e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTEWHRVVLFGK-LAEVAGEY 71
Cdd:PRK06341    5 VNKVILIGNLGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTEWHRVVIFNEgLCKVAEQY 71
SSB pfam00436
Single-strand binding protein family; This family includes single stranded binding proteins ...
6-71 1.20e-25

Single-strand binding protein family; This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.


Pssm-ID: 425680  Cd Length: 103  Bit Score: 90.37  E-value: 1.20e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKelTEWHRVVLFGKLAEVAGEY 71
Cdd:pfam00436   1 MNKVILVGRLTRDPELRYTPNGNAVANFTLATNRRFKDRGEGDEE--TDFHRVVVFGKLAEVAAQY 64
PRK08763 PRK08763
single-stranded DNA-binding protein; Provisional
5-71 2.46e-24

single-stranded DNA-binding protein; Provisional


Pssm-ID: 181549 [Multi-domain]  Cd Length: 164  Bit Score: 88.84  E-value: 2.46e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1475491739   5 GINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQtGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK08763    4 GINKVILVGNLGNDPDIKYTQSGMTITRISLATTSVRKDRE-GNTQERTEWHRVKFFGKLGEIAGEY 69
PRK06642 PRK06642
single-stranded DNA-binding protein; Provisional
6-71 4.15e-22

single-stranded DNA-binding protein; Provisional


Pssm-ID: 135984  Cd Length: 152  Bit Score: 82.85  E-value: 4.15e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTEWHRVVLFGK-LAEVAGEY 71
Cdd:PRK06642    5 LNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTEWHRVVIFSEgLVSVVERY 71
SSB_OBF cd04496
SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs ...
9-71 4.44e-22

SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.


Pssm-ID: 239942  Cd Length: 100  Bit Score: 81.12  E-value: 4.44e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1475491739   9 VVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKqtGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:cd04496     1 VILIGRLGKDPELRYTPSGTPVARFSLAVNRRRKDR--DEEEEETDWIRVVAFGKLAENAAKY 61
PRK08486 PRK08486
single-stranded DNA-binding protein; Provisional
7-71 1.33e-16

single-stranded DNA-binding protein; Provisional


Pssm-ID: 236275 [Multi-domain]  Cd Length: 182  Bit Score: 69.49  E-value: 1.33e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1475491739   7 NKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRdKQTGEIKELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK08486    3 NKVILVGNLTRDVELRYLPSGSAIATIGLATSRRFK-KQDGEKGEEVCFIDIRLFGRTAEIANQY 66
PRK07459 PRK07459
single-stranded DNA-binding protein; Provisional
5-71 1.17e-13

single-stranded DNA-binding protein; Provisional


Pssm-ID: 180986  Cd Length: 121  Bit Score: 60.47  E-value: 1.17e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1475491739   5 GINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQtgeikelTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK07459    2 SLNSVTLVGRAGRDPEVRYFESGSVVCNLTLAVNRRSRDDE-------PDWFNLEIWGKTAQVAADY 61
PRK06751 PRK06751
single-stranded DNA-binding protein; Provisional
6-71 7.45e-10

single-stranded DNA-binding protein; Provisional


Pssm-ID: 168659 [Multi-domain]  Cd Length: 173  Bit Score: 51.72  E-value: 7.45e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQtGEIKelTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK06751    2 MNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQ-GERE--ADFINCVIWRKQAENVANY 64
PRK07275 PRK07275
single-stranded DNA-binding protein; Provisional
6-48 2.02e-08

single-stranded DNA-binding protein; Provisional


Pssm-ID: 180915 [Multi-domain]  Cd Length: 162  Bit Score: 47.58  E-value: 2.02e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDkQTGE 48
Cdd:PRK07275    2 INNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKS-QNGE 43
PRK07772 PRK07772
single-stranded DNA-binding protein; Provisional
9-50 1.37e-07

single-stranded DNA-binding protein; Provisional


Pssm-ID: 236092 [Multi-domain]  Cd Length: 186  Bit Score: 45.80  E-value: 1.37e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1475491739   9 VVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIK 50
Cdd:PRK07772    7 ITVVGNLTADPELRFTPSGAAVANFTVASTPRTFDRQTNEWK 48
PRK06752 PRK06752
single-stranded DNA-binding protein; Validated
6-71 3.03e-06

single-stranded DNA-binding protein; Validated


Pssm-ID: 168660  Cd Length: 112  Bit Score: 41.17  E-value: 3.03e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1475491739   6 INKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDkQTGEikELTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK06752    2 MNRVVLIGRLTKEPELYYTKQGVAYARVCVAVNRGFRN-SLGE--QQVDFINCVVWRKSAENVTEY 64
PRK07274 PRK07274
single-stranded DNA-binding protein; Provisional
7-71 4.77e-06

single-stranded DNA-binding protein; Provisional


Pssm-ID: 180914  Cd Length: 131  Bit Score: 40.90  E-value: 4.77e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1475491739   7 NKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDkQTGEiKElTEWHRVVLFGKLAEVAGEY 71
Cdd:PRK07274    3 NKVILIGRLTATPELVKTANDKSVARVTLAVNRRFKN-QNGE-RE-ADFINVVLWGKLAETLASY 64
PRK06293 PRK06293
single-stranded DNA-binding protein; Provisional
9-62 2.34e-05

single-stranded DNA-binding protein; Provisional


Pssm-ID: 180517 [Multi-domain]  Cd Length: 161  Bit Score: 39.50  E-value: 2.34e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1475491739   9 VVLVGRLGKDPEVRYIPNGGAVANLQVATseswrdKQTGEIKELTEWHRVVLFG 62
Cdd:PRK06293    4 GYIVGRLGADPEERMTSKGKRVVVLRLGV------KSRVGSKDETVWCRCNIWG 51
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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