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Conserved domains on  [gi|1494899597|ref|WP_121638438|]
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MULTISPECIES: DUF1496 domain-containing protein [Pseudoalteromonas]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1496 super family cl06431
Protein of unknown function (DUF1496); This family consists of several bacterial proteins of ...
 31-83 2.49e-20

Protein of unknown function (DUF1496); This family consists of several bacterial proteins of around 90 residues in length. Members of this family seem to be found exclusively in the Orders Vibrionales and Enterobacteriales. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam07383:

Pssm-ID: 429436  Cd Length: 51  Bit Score: 76.64  E-value: 2.49e-20
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1494899597  31 IDANEIINNgyICWYDNKRYSEGALVQVHSFTLVCAAKNPQHNNSELIWLKLD 83
Cdd:pfam07383   1 WTAGGLVNR--CCYYEDKAYSEGAVIKVEGVLLQCARDNEQEGNGPLIWLELK 51
 
Name Accession Description Interval E-value
DUF1496 pfam07383
Protein of unknown function (DUF1496); This family consists of several bacterial proteins of ...
 31-83 2.49e-20

Protein of unknown function (DUF1496); This family consists of several bacterial proteins of around 90 residues in length. Members of this family seem to be found exclusively in the Orders Vibrionales and Enterobacteriales. The function of this family is unknown.


Pssm-ID: 429436  Cd Length: 51  Bit Score: 76.64  E-value: 2.49e-20
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1494899597  31 IDANEIINNgyICWYDNKRYSEGALVQVHSFTLVCAAKNPQHNNSELIWLKLD 83
Cdd:pfam07383   1 WTAGGLVNR--CCYYEDKAYSEGAVIKVEGVLLQCARDNEQEGNGPLIWLELK 51
 
Name Accession Description Interval E-value
DUF1496 pfam07383
Protein of unknown function (DUF1496); This family consists of several bacterial proteins of ...
 31-83 2.49e-20

Protein of unknown function (DUF1496); This family consists of several bacterial proteins of around 90 residues in length. Members of this family seem to be found exclusively in the Orders Vibrionales and Enterobacteriales. The function of this family is unknown.


Pssm-ID: 429436  Cd Length: 51  Bit Score: 76.64  E-value: 2.49e-20
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1494899597  31 IDANEIINNgyICWYDNKRYSEGALVQVHSFTLVCAAKNPQHNNSELIWLKLD 83
Cdd:pfam07383   1 WTAGGLVNR--CCYYEDKAYSEGAVIKVEGVLLQCARDNEQEGNGPLIWLELK 51
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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