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Conserved domains on  [gi|1509896861|ref|WP_122649032|]
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DUF3274 domain-containing protein, partial [Burkholderia pseudomallei]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3274 super family cl13178
Protein of unknown function (DUF3274); This bacterial family of proteins has no known function.
 3-106 4.59e-53

Protein of unknown function (DUF3274); This bacterial family of proteins has no known function.


The actual alignment was detected with superfamily member pfam11678:

Pssm-ID: 371665  Cd Length: 286  Bit Score: 167.36  E-value: 4.59e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509896861   3 VDEQSHNWRIVPSRSLGSMLSaaatggryQTYVIQREETPDEVRKRMRTDADQLEANNYHSGVLLSSENHRWVTAMDVAI 82
Cdd:pfam11678 152 VRSVSHALREGKSLAQGSHVF--------GMYLVEREETPREARERMQTDEDALEANSYHSGILNNPENHRWVTAMDVAI 223

                          90       100
                  ....*....|....*....|....
gi 1509896861  83 GQAVTLDDPDWRQLLLLMADWKMT 106
Cdd:pfam11678 224 GQAKSLDDPVWRQLLIAMADWKLD 247
 
Name Accession Description Interval E-value
DUF3274 pfam11678
Protein of unknown function (DUF3274); This bacterial family of proteins has no known function.
 3-106 4.59e-53

Protein of unknown function (DUF3274); This bacterial family of proteins has no known function.


Pssm-ID: 371665  Cd Length: 286  Bit Score: 167.36  E-value: 4.59e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509896861   3 VDEQSHNWRIVPSRSLGSMLSaaatggryQTYVIQREETPDEVRKRMRTDADQLEANNYHSGVLLSSENHRWVTAMDVAI 82
Cdd:pfam11678 152 VRSVSHALREGKSLAQGSHVF--------GMYLVEREETPREARERMQTDEDALEANSYHSGILNNPENHRWVTAMDVAI 223

                          90       100
                  ....*....|....*....|....
gi 1509896861  83 GQAVTLDDPDWRQLLLLMADWKMT 106
Cdd:pfam11678 224 GQAKSLDDPVWRQLLIAMADWKLD 247
 
Name Accession Description Interval E-value
DUF3274 pfam11678
Protein of unknown function (DUF3274); This bacterial family of proteins has no known function.
 3-106 4.59e-53

Protein of unknown function (DUF3274); This bacterial family of proteins has no known function.


Pssm-ID: 371665  Cd Length: 286  Bit Score: 167.36  E-value: 4.59e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509896861   3 VDEQSHNWRIVPSRSLGSMLSaaatggryQTYVIQREETPDEVRKRMRTDADQLEANNYHSGVLLSSENHRWVTAMDVAI 82
Cdd:pfam11678 152 VRSVSHALREGKSLAQGSHVF--------GMYLVEREETPREARERMQTDEDALEANSYHSGILNNPENHRWVTAMDVAI 223

                          90       100
                  ....*....|....*....|....
gi 1509896861  83 GQAVTLDDPDWRQLLLLMADWKMT 106
Cdd:pfam11678 224 GQAKSLDDPVWRQLLIAMADWKLD 247
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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