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Conserved domains on  [gi|1545325011|ref|WP_126493946|]
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MULTISPECIES: hypothetical protein [Enterobacteriaceae]

Protein Classification

glycoside hydrolase family protein( domain architecture ID 581038)

glycoside hydrolase family protein may catalyze the hydrolysis of glycosidic bonds in complex sugars

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glyco_hydro super family cl23725
Glycosyl hydrolases; A functionally diverse superfamily containing glycosyl hydrolase families ...
 17-117 1.64e-03

Glycosyl hydrolases; A functionally diverse superfamily containing glycosyl hydrolase families 1,5,10,17,44,72, and others.


The actual alignment was detected with superfamily member pfam01229:

Pssm-ID: 474034  Cd Length: 472  Bit Score: 37.59  E-value: 1.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1545325011  17 YINNHYLGSQDASSERLCLGEILEQLSLLPGVEktTLRSTVPEDDDW-CWNDIADRVLPPLSACRDDVTVAALIARL--- 92
Cdd:pfam01229 220 FISLHAYSKKGAGSSILILEEEMASEYMLNEVK--QVRELIPEFPDLpVYNTEANPSWSPPQPWHDDPTYAAYVVKViaq 297

                          90       100
                  ....*....|....*....|....*
gi 1545325011  93 QQYPPDALCMGTFwlEDDFLSLDNS 117
Cdd:pfam01229 298 HQDLPDANSYWTF--RDVFEENDNA 320
 
Name Accession Description Interval E-value
Glyco_hydro_39 pfam01229
Glycosyl hydrolases family 39;
17-117 1.64e-03

Glycosyl hydrolases family 39;


Pssm-ID: 426141  Cd Length: 472  Bit Score: 37.59  E-value: 1.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1545325011  17 YINNHYLGSQDASSERLCLGEILEQLSLLPGVEktTLRSTVPEDDDW-CWNDIADRVLPPLSACRDDVTVAALIARL--- 92
Cdd:pfam01229 220 FISLHAYSKKGAGSSILILEEEMASEYMLNEVK--QVRELIPEFPDLpVYNTEANPSWSPPQPWHDDPTYAAYVVKViaq 297

                          90       100
                  ....*....|....*....|....*
gi 1545325011  93 QQYPPDALCMGTFwlEDDFLSLDNS 117
Cdd:pfam01229 298 HQDLPDANSYWTF--RDVFEENDNA 320
 
Name Accession Description Interval E-value
Glyco_hydro_39 pfam01229
Glycosyl hydrolases family 39;
17-117 1.64e-03

Glycosyl hydrolases family 39;


Pssm-ID: 426141  Cd Length: 472  Bit Score: 37.59  E-value: 1.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1545325011  17 YINNHYLGSQDASSERLCLGEILEQLSLLPGVEktTLRSTVPEDDDW-CWNDIADRVLPPLSACRDDVTVAALIARL--- 92
Cdd:pfam01229 220 FISLHAYSKKGAGSSILILEEEMASEYMLNEVK--QVRELIPEFPDLpVYNTEANPSWSPPQPWHDDPTYAAYVVKViaq 297

                          90       100
                  ....*....|....*....|....*
gi 1545325011  93 QQYPPDALCMGTFwlEDDFLSLDNS 117
Cdd:pfam01229 298 HQDLPDANSYWTF--RDVFEENDNA 320
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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