NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1559334854|ref|WP_128150676|]
View 

cell division protein ZapA [Apibacter raozihei]

Protein Classification

cell division protein ZapA( domain architecture ID 10524298)

cell division protein ZapA interacts with FtsZ, a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the cell cycle

CATH:  1.10.20.30
Gene Ontology:  GO:0000917
SCOP:  4001324

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ZapA pfam05164
Cell division protein ZapA; ZapA is a cell division protein which interacts with FtsZ. FtsZ is ...
 5-87 1.47e-12

Cell division protein ZapA; ZapA is a cell division protein which interacts with FtsZ. FtsZ is part of a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the bacterial cell cycle. The interaction of FtsZ with ZapA drives its polymerization and promotes FtsZ filament bundling thereby contributing to the spatio-temporal tuning of the Z-ring.


:

Pssm-ID: 461565 [Multi-domain]  Cd Length: 85  Bit Score: 57.56  E-value: 1.47e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559334854  5 VNIRVAGRNYPLVVQEDEEQVLRNAAKRLEEYVVRFEKNYSISEKQDALAMSALQLASELENLLKEKTKEQEEILLRIKK 84
Cdd:pfam05164  1 VTVTILGREYTLACPEGEEEYLRKAAKYVDEKIKEIRESGGVLSTERLAVLAALNLADELLKLKREAEELEEELEERLEE 80


                 ...
gi 1559334854 85 ISN 87
Cdd:pfam05164 81 LAE 83
 
Name Accession Description Interval E-value
ZapA pfam05164
Cell division protein ZapA; ZapA is a cell division protein which interacts with FtsZ. FtsZ is ...
 5-87 1.47e-12

Cell division protein ZapA; ZapA is a cell division protein which interacts with FtsZ. FtsZ is part of a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the bacterial cell cycle. The interaction of FtsZ with ZapA drives its polymerization and promotes FtsZ filament bundling thereby contributing to the spatio-temporal tuning of the Z-ring.


Pssm-ID: 461565 [Multi-domain]  Cd Length: 85  Bit Score: 57.56  E-value: 1.47e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559334854  5 VNIRVAGRNYPLVVQEDEEQVLRNAAKRLEEYVVRFEKNYSISEKQDALAMSALQLASELENLLKEKTKEQEEILLRIKK 84
Cdd:pfam05164  1 VTVTILGREYTLACPEGEEEYLRKAAKYVDEKIKEIRESGGVLSTERLAVLAALNLADELLKLKREAEELEEELEERLEE 80


                 ...
gi 1559334854 85 ISN 87
Cdd:pfam05164 81 LAE 83
ZapA COG3027
Cell division protein ZapA, inhibits GTPase activity of FtsZ [Cell cycle control, cell ...
 1-91 1.32e-11

Cell division protein ZapA, inhibits GTPase activity of FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442263 [Multi-domain]  Cd Length: 94  Bit Score: 55.27  E-value: 1.32e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559334854  1 MSQKVNIRVAGRNYPLVVQEDEEQVLRNAAKRLEEYVVRFEKNYSISEKQDALAMSALQLASELENLLKEKTKEQEEILL 80
Cdd:COG3027    2 SMNRVTVTILGREYRLACPEGEEEHLREAAAYVDEKMREIREKGGVLGTERLAVLAALNLADELLKLKEELEELEERLEE 81

                         90
                 ....*....|.
gi 1559334854 81 RIKKISNLVTE 91
Cdd:COG3027   82 LEEKLDEALEE 92
PLN02372 PLN02372
violaxanthin de-epoxidase
 18-84 2.06e-03

violaxanthin de-epoxidase


Pssm-ID: 215212 [Multi-domain]  Cd Length: 455  Bit Score: 35.20  E-value: 2.06e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559334854  18 VQEDEEQVLRNA---AKRLEEYVVRFEKNYSISEKQDALAMSALQLASELENLLKEKTKEQEEILLRIKK 84
Cdd:PLN02372  370 VEEGEKTIVKEArqiEEELEKEVEKLGKEEESLFKRVALEEGLKELEQDEENFLKELSKEEKELLEKLKM 439
 
Name Accession Description Interval E-value
ZapA pfam05164
Cell division protein ZapA; ZapA is a cell division protein which interacts with FtsZ. FtsZ is ...
 5-87 1.47e-12

Cell division protein ZapA; ZapA is a cell division protein which interacts with FtsZ. FtsZ is part of a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the bacterial cell cycle. The interaction of FtsZ with ZapA drives its polymerization and promotes FtsZ filament bundling thereby contributing to the spatio-temporal tuning of the Z-ring.


Pssm-ID: 461565 [Multi-domain]  Cd Length: 85  Bit Score: 57.56  E-value: 1.47e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559334854  5 VNIRVAGRNYPLVVQEDEEQVLRNAAKRLEEYVVRFEKNYSISEKQDALAMSALQLASELENLLKEKTKEQEEILLRIKK 84
Cdd:pfam05164  1 VTVTILGREYTLACPEGEEEYLRKAAKYVDEKIKEIRESGGVLSTERLAVLAALNLADELLKLKREAEELEEELEERLEE 80


                 ...
gi 1559334854 85 ISN 87
Cdd:pfam05164 81 LAE 83
ZapA COG3027
Cell division protein ZapA, inhibits GTPase activity of FtsZ [Cell cycle control, cell ...
 1-91 1.32e-11

Cell division protein ZapA, inhibits GTPase activity of FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442263 [Multi-domain]  Cd Length: 94  Bit Score: 55.27  E-value: 1.32e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559334854  1 MSQKVNIRVAGRNYPLVVQEDEEQVLRNAAKRLEEYVVRFEKNYSISEKQDALAMSALQLASELENLLKEKTKEQEEILL 80
Cdd:COG3027    2 SMNRVTVTILGREYRLACPEGEEEHLREAAAYVDEKMREIREKGGVLGTERLAVLAALNLADELLKLKEELEELEERLEE 81

                         90
                 ....*....|.
gi 1559334854 81 RIKKISNLVTE 91
Cdd:COG3027   82 LEEKLDEALEE 92
PLN02372 PLN02372
violaxanthin de-epoxidase
 18-84 2.06e-03

violaxanthin de-epoxidase


Pssm-ID: 215212 [Multi-domain]  Cd Length: 455  Bit Score: 35.20  E-value: 2.06e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559334854  18 VQEDEEQVLRNA---AKRLEEYVVRFEKNYSISEKQDALAMSALQLASELENLLKEKTKEQEEILLRIKK 84
Cdd:PLN02372  370 VEEGEKTIVKEArqiEEELEKEVEKLGKEEESLFKRVALEEGLKELEQDEENFLKELSKEEKELLEKLKM 439
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH