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Conserved domains on  [gi|1624566405|ref|WP_136409448|]
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DUF4062 domain-containing protein [Muribaculum gordoncarteri]

Protein Classification

DUF4062 domain-containing protein( domain architecture ID 10594013)

DUF4062 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4062 pfam13271
Domain of unknown function (DUF4062); This presumed domain is functionally uncharacterized. ...
 8-104 3.07e-09

Domain of unknown function (DUF4062); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. There is a conserved SST sequence motif.


:

Pssm-ID: 463823  Cd Length: 78  Bit Score: 54.52  E-value: 3.07e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624566405    8 RVFISSTFADMQRERTllhkhvlpIIKDYCRKYGWDfefvdlRWGITEEQADENLTLQICLNEIKLCQeIsprpnFLILA 87
Cdd:pfam13271    1 KVFISSTFYDLKEERE--------ALIEALLELGHI------PVGMEEFPASDESPLDVCLREVDECD-I-----YILIL 60

                           90
                   ....*....|....*..
gi 1624566405   88 GERYGWIPDTDHIPIEL 104
Cdd:pfam13271   61 GGRYGSIDPDGISYTEL 77
 
Name Accession Description Interval E-value
DUF4062 pfam13271
Domain of unknown function (DUF4062); This presumed domain is functionally uncharacterized. ...
 8-104 3.07e-09

Domain of unknown function (DUF4062); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. There is a conserved SST sequence motif.


Pssm-ID: 463823  Cd Length: 78  Bit Score: 54.52  E-value: 3.07e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624566405    8 RVFISSTFADMQRERTllhkhvlpIIKDYCRKYGWDfefvdlRWGITEEQADENLTLQICLNEIKLCQeIsprpnFLILA 87
Cdd:pfam13271    1 KVFISSTFYDLKEERE--------ALIEALLELGHI------PVGMEEFPASDESPLDVCLREVDECD-I-----YILIL 60

                           90
                   ....*....|....*..
gi 1624566405   88 GERYGWIPDTDHIPIEL 104
Cdd:pfam13271   61 GGRYGSIDPDGISYTEL 77
 
Name Accession Description Interval E-value
DUF4062 pfam13271
Domain of unknown function (DUF4062); This presumed domain is functionally uncharacterized. ...
 8-104 3.07e-09

Domain of unknown function (DUF4062); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. There is a conserved SST sequence motif.


Pssm-ID: 463823  Cd Length: 78  Bit Score: 54.52  E-value: 3.07e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1624566405    8 RVFISSTFADMQRERTllhkhvlpIIKDYCRKYGWDfefvdlRWGITEEQADENLTLQICLNEIKLCQeIsprpnFLILA 87
Cdd:pfam13271    1 KVFISSTFYDLKEERE--------ALIEALLELGHI------PVGMEEFPASDESPLDVCLREVDECD-I-----YILIL 60

                           90
                   ....*....|....*..
gi 1624566405   88 GERYGWIPDTDHIPIEL 104
Cdd:pfam13271   61 GGRYGSIDPDGISYTEL 77
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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