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Conserved domains on  [gi|1655025392|ref|WP_137551600|]
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DUF987 family protein, partial [Escherichia coli]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF987 super family cl05604
Protein of unknown function (DUF987); Family of bacterial proteins that are related to the ...
 1-52 5.51e-32

Protein of unknown function (DUF987); Family of bacterial proteins that are related to the hypothetical protein yeeT.


The actual alignment was detected with superfamily member pfam06174:

Pssm-ID: 368775  Cd Length: 65  Bit Score: 104.63  E-value: 5.51e-32
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 1655025392  1 RQHPASRLFPFCTGKYRWHGSAEAYTGREVQDIPGVLAVFAERRKDSFGPYV 52
Cdd:pfam06174 14 RQHPASRPFKYCTGKYKWHGSASDYTGRDVDDIPGVLAVYAERRSDANGPYA 65
 
Name Accession Description Interval E-value
DUF987 pfam06174
Protein of unknown function (DUF987); Family of bacterial proteins that are related to the ...
 1-52 5.51e-32

Protein of unknown function (DUF987); Family of bacterial proteins that are related to the hypothetical protein yeeT.


Pssm-ID: 368775  Cd Length: 65  Bit Score: 104.63  E-value: 5.51e-32
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 1655025392  1 RQHPASRLFPFCTGKYRWHGSAEAYTGREVQDIPGVLAVFAERRKDSFGPYV 52
Cdd:pfam06174 14 RQHPASRPFKYCTGKYKWHGSASDYTGRDVDDIPGVLAVYAERRSDANGPYA 65
 
Name Accession Description Interval E-value
DUF987 pfam06174
Protein of unknown function (DUF987); Family of bacterial proteins that are related to the ...
 1-52 5.51e-32

Protein of unknown function (DUF987); Family of bacterial proteins that are related to the hypothetical protein yeeT.


Pssm-ID: 368775  Cd Length: 65  Bit Score: 104.63  E-value: 5.51e-32
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 1655025392  1 RQHPASRLFPFCTGKYRWHGSAEAYTGREVQDIPGVLAVFAERRKDSFGPYV 52
Cdd:pfam06174 14 RQHPASRPFKYCTGKYKWHGSASDYTGRDVDDIPGVLAVYAERRSDANGPYA 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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