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Conserved domains on  [gi|1675104307|ref|WP_138618697|]
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FlgO family outer membrane protein [Pseudoalteromonas sp. S2721]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FlgO pfam17680
FlgO protein; This entry represents the FlgO protein. Mutation of this protein in Vibrio ...
 75-205 2.28e-53

FlgO protein; This entry represents the FlgO protein. Mutation of this protein in Vibrio cholerae has been shown to reduce motility. FlgO is an outer membrane protein that localizes throughout the membrane and not at the flagellar pole. Although FlgO and FlgP do not specifically localize to the flagellum, they are required for flagellar stability. Proteins in this family mostly contain an N-terminal lipoprotein attachment motif.


:

Pssm-ID: 435970  Cd Length: 130  Bit Score: 167.68  E-value: 2.28e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104307  75 RGIMQDLVENLQYVSDNTPVAVSSFVYLDaDYNSTNLLGNQIAESFIHELHAFGVPVIDFKTTDYMRVTPSGDYVFSRDY 154
Cdd:pfam17680   1 YQLADQLLANLDPLLLRRPIAVTSFVDLD-DLQQTSTLGRQLSESLITELQQRGYSVVEYKLTDSIRVTEEGEFALSRDL 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1675104307 155 LELSQDQNFNYVLAGTLVNHQSGVLVNARIVGLASKAVVGSAQGFIPQSVV 205
Cdd:pfam17680  80 RELAETQNADYVLVGTYTVTRDGVLVNARLIDLKDNQVLAAAQYFIPLNVL 130
 
Name Accession Description Interval E-value
FlgO pfam17680
FlgO protein; This entry represents the FlgO protein. Mutation of this protein in Vibrio ...
 75-205 2.28e-53

FlgO protein; This entry represents the FlgO protein. Mutation of this protein in Vibrio cholerae has been shown to reduce motility. FlgO is an outer membrane protein that localizes throughout the membrane and not at the flagellar pole. Although FlgO and FlgP do not specifically localize to the flagellum, they are required for flagellar stability. Proteins in this family mostly contain an N-terminal lipoprotein attachment motif.


Pssm-ID: 435970  Cd Length: 130  Bit Score: 167.68  E-value: 2.28e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104307  75 RGIMQDLVENLQYVSDNTPVAVSSFVYLDaDYNSTNLLGNQIAESFIHELHAFGVPVIDFKTTDYMRVTPSGDYVFSRDY 154
Cdd:pfam17680   1 YQLADQLLANLDPLLLRRPIAVTSFVDLD-DLQQTSTLGRQLSESLITELQQRGYSVVEYKLTDSIRVTEEGEFALSRDL 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1675104307 155 LELSQDQNFNYVLAGTLVNHQSGVLVNARIVGLASKAVVGSAQGFIPQSVV 205
Cdd:pfam17680  80 RELAETQNADYVLVGTYTVTRDGVLVNARLIDLKDNQVLAAAQYFIPLNVL 130
 
Name Accession Description Interval E-value
FlgO pfam17680
FlgO protein; This entry represents the FlgO protein. Mutation of this protein in Vibrio ...
 75-205 2.28e-53

FlgO protein; This entry represents the FlgO protein. Mutation of this protein in Vibrio cholerae has been shown to reduce motility. FlgO is an outer membrane protein that localizes throughout the membrane and not at the flagellar pole. Although FlgO and FlgP do not specifically localize to the flagellum, they are required for flagellar stability. Proteins in this family mostly contain an N-terminal lipoprotein attachment motif.


Pssm-ID: 435970  Cd Length: 130  Bit Score: 167.68  E-value: 2.28e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104307  75 RGIMQDLVENLQYVSDNTPVAVSSFVYLDaDYNSTNLLGNQIAESFIHELHAFGVPVIDFKTTDYMRVTPSGDYVFSRDY 154
Cdd:pfam17680   1 YQLADQLLANLDPLLLRRPIAVTSFVDLD-DLQQTSTLGRQLSESLITELQQRGYSVVEYKLTDSIRVTEEGEFALSRDL 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1675104307 155 LELSQDQNFNYVLAGTLVNHQSGVLVNARIVGLASKAVVGSAQGFIPQSVV 205
Cdd:pfam17680  80 RELAETQNADYVLVGTYTVTRDGVLVNARLIDLKDNQVLAAAQYFIPLNVL 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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