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Conserved domains on  [gi|1675104320|ref|WP_138618709|]
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flagellar assembly protein FlgT [Pseudoalteromonas sp. S2721]

Protein Classification

flagellar assembly protein FlgT( domain architecture ID 11243942)

flagellar assembly protein FlgT is required to form and stabilize the two unique basal body ring structures, the T ring and the H ring, of the sodium-driven flagellar motor

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FlgT_M pfam16539
Flagellar assembly protein T, middle domain; FlgT_M is the middle region of a family of ...
 117-272 1.64e-41

Flagellar assembly protein T, middle domain; FlgT_M is the middle region of a family of flagellar proteins that make up part of the basal body of the flagellum. The flagellum is a large macromolecular assembly composed of three major parts: the basal body, the hook, and the filament. The basal body has two unique ring structures, the T ring and the H ring. FlgT is required to form and stabilize both ring structures. FlgT-N and FlgT-M are thought to be involved in the H-ring and the T-ring formation, respectively. and FlgT-M is also required for the stable association of FlgT with the basal body.


:

Pssm-ID: 435409  Cd Length: 163  Bit Score: 143.72  E-value: 1.64e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104320 117 EECPANQYTKFIAVTQSQLANREQARMGQIFDVNKAISEHLYASLNNTQMAAKPTAYYNMPLRVDH-------FFTQQYD 189
Cdd:pfam16539   1 GQCHASQYKKAIALTQFQLQYRQQARYGQLYDLGEALSRRLQNRLQGSSRSAVSNATADSRIDDLLdlnagvaPTYLSDD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104320 190 YSNALLEEITSRSNSQYVLLSRIRDLSVNHKINNDYAFWQDDSFKRAYKVDYVLFDGTTYEKLWQKSYQTEGIWPYKKTE 269
Cdd:pfam16539  81 ESLRLITDLAEDTDAQYVLSGVIRDLSVEDEHSSGLGFWTDDDPQRQFALELTLYDGISGELLFQKRYRTSAPWDFERTS 160


                  ...
gi 1675104320 270 IID 272
Cdd:pfam16539 161 QVD 163
FlgT_N pfam16548
Flagellar assembly protein T, N-terminal domain; FlgT_N is the N-terminal domain of a family ...
 28-113 1.73e-19

Flagellar assembly protein T, N-terminal domain; FlgT_N is the N-terminal domain of a family of flagellar proteins that make up part of the basal body of the flagellum. The flagellum is a large macromolecular assembly composed of three major parts: the basal body, the hook, and the filament. The basal body has two unique ring structures, the T ring and the H ring. FlgT is required to form and stabilize both ring structures. FlgT-N contributes to the construction of the H-ring structure, and adopts a two-layer alpha-beta sandwich architecture composed of a four-stranded anti-parallel beta-sheet and two alpha helices.


:

Pssm-ID: 465169  Cd Length: 87  Bit Score: 82.36  E-value: 1.73e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104320  28 WFESTGHAVIKNGDtSQAKSAAIKDAITQALVFSGARVSSVQTLVDGVLTQDQLKISSHGEIQKIELISEDRHNDTYAIT 107
Cdd:pfam16548   2 WVEVTGKAAIIGND-DIAREQAREDALSQALLYAGAQVSSISSLQPLLEGSLTETQFSNGEVRNVELLSERVSDGRLTVT 80


                  ....*.
gi 1675104320 108 LRLDIF 113
Cdd:pfam16548  81 LRADIY 86
FlgT_C pfam16538
Flagellar assembly protein T, C-terminal domain; FlgT_C is the C-terminal domain of a family ...
 316-390 8.98e-19

Flagellar assembly protein T, C-terminal domain; FlgT_C is the C-terminal domain of a family of flagellar proteins that make up part of the basal body of the flagellum. The flagellum is a large macromolecular assembly composed of three major parts: the basal body, the hook, and the filament. The basal body has two unique ring structures, the T ring and the H ring. FlgT is required to form and stabilize both ring structures. FlgT_C is not essential but stabilizes the H-ring structure..


:

Pssm-ID: 435408  Cd Length: 77  Bit Score: 79.96  E-value: 8.98e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1675104320 316 NDRLIINLGKAHGIEQGQILNIAHHNYLTDAQGNKLPHKITTLNQVKVTQLYQQSAVAISIDQQPLPNIQINDIV 390
Cdd:pfam16538   1 GNRVTINLGRKHGVKPGDKLQLVRSAQFIDALGEPRNKLTQSDATLTVEQVYEEFAIASLVQENLAYNIQIGDIV 75
 
Name Accession Description Interval E-value
FlgT_M pfam16539
Flagellar assembly protein T, middle domain; FlgT_M is the middle region of a family of ...
 117-272 1.64e-41

Flagellar assembly protein T, middle domain; FlgT_M is the middle region of a family of flagellar proteins that make up part of the basal body of the flagellum. The flagellum is a large macromolecular assembly composed of three major parts: the basal body, the hook, and the filament. The basal body has two unique ring structures, the T ring and the H ring. FlgT is required to form and stabilize both ring structures. FlgT-N and FlgT-M are thought to be involved in the H-ring and the T-ring formation, respectively. and FlgT-M is also required for the stable association of FlgT with the basal body.


Pssm-ID: 435409  Cd Length: 163  Bit Score: 143.72  E-value: 1.64e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104320 117 EECPANQYTKFIAVTQSQLANREQARMGQIFDVNKAISEHLYASLNNTQMAAKPTAYYNMPLRVDH-------FFTQQYD 189
Cdd:pfam16539   1 GQCHASQYKKAIALTQFQLQYRQQARYGQLYDLGEALSRRLQNRLQGSSRSAVSNATADSRIDDLLdlnagvaPTYLSDD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104320 190 YSNALLEEITSRSNSQYVLLSRIRDLSVNHKINNDYAFWQDDSFKRAYKVDYVLFDGTTYEKLWQKSYQTEGIWPYKKTE 269
Cdd:pfam16539  81 ESLRLITDLAEDTDAQYVLSGVIRDLSVEDEHSSGLGFWTDDDPQRQFALELTLYDGISGELLFQKRYRTSAPWDFERTS 160


                  ...
gi 1675104320 270 IID 272
Cdd:pfam16539 161 QVD 163
FlgT_N pfam16548
Flagellar assembly protein T, N-terminal domain; FlgT_N is the N-terminal domain of a family ...
 28-113 1.73e-19

Flagellar assembly protein T, N-terminal domain; FlgT_N is the N-terminal domain of a family of flagellar proteins that make up part of the basal body of the flagellum. The flagellum is a large macromolecular assembly composed of three major parts: the basal body, the hook, and the filament. The basal body has two unique ring structures, the T ring and the H ring. FlgT is required to form and stabilize both ring structures. FlgT-N contributes to the construction of the H-ring structure, and adopts a two-layer alpha-beta sandwich architecture composed of a four-stranded anti-parallel beta-sheet and two alpha helices.


Pssm-ID: 465169  Cd Length: 87  Bit Score: 82.36  E-value: 1.73e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104320  28 WFESTGHAVIKNGDtSQAKSAAIKDAITQALVFSGARVSSVQTLVDGVLTQDQLKISSHGEIQKIELISEDRHNDTYAIT 107
Cdd:pfam16548   2 WVEVTGKAAIIGND-DIAREQAREDALSQALLYAGAQVSSISSLQPLLEGSLTETQFSNGEVRNVELLSERVSDGRLTVT 80


                  ....*.
gi 1675104320 108 LRLDIF 113
Cdd:pfam16548  81 LRADIY 86
FlgT_C pfam16538
Flagellar assembly protein T, C-terminal domain; FlgT_C is the C-terminal domain of a family ...
 316-390 8.98e-19

Flagellar assembly protein T, C-terminal domain; FlgT_C is the C-terminal domain of a family of flagellar proteins that make up part of the basal body of the flagellum. The flagellum is a large macromolecular assembly composed of three major parts: the basal body, the hook, and the filament. The basal body has two unique ring structures, the T ring and the H ring. FlgT is required to form and stabilize both ring structures. FlgT_C is not essential but stabilizes the H-ring structure..


Pssm-ID: 435408  Cd Length: 77  Bit Score: 79.96  E-value: 8.98e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1675104320 316 NDRLIINLGKAHGIEQGQILNIAHHNYLTDAQGNKLPHKITTLNQVKVTQLYQQSAVAISIDQQPLPNIQINDIV 390
Cdd:pfam16538   1 GNRVTINLGRKHGVKPGDKLQLVRSAQFIDALGEPRNKLTQSDATLTVEQVYEEFAIASLVQENLAYNIQIGDIV 75
 
Name Accession Description Interval E-value
FlgT_M pfam16539
Flagellar assembly protein T, middle domain; FlgT_M is the middle region of a family of ...
 117-272 1.64e-41

Flagellar assembly protein T, middle domain; FlgT_M is the middle region of a family of flagellar proteins that make up part of the basal body of the flagellum. The flagellum is a large macromolecular assembly composed of three major parts: the basal body, the hook, and the filament. The basal body has two unique ring structures, the T ring and the H ring. FlgT is required to form and stabilize both ring structures. FlgT-N and FlgT-M are thought to be involved in the H-ring and the T-ring formation, respectively. and FlgT-M is also required for the stable association of FlgT with the basal body.


Pssm-ID: 435409  Cd Length: 163  Bit Score: 143.72  E-value: 1.64e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104320 117 EECPANQYTKFIAVTQSQLANREQARMGQIFDVNKAISEHLYASLNNTQMAAKPTAYYNMPLRVDH-------FFTQQYD 189
Cdd:pfam16539   1 GQCHASQYKKAIALTQFQLQYRQQARYGQLYDLGEALSRRLQNRLQGSSRSAVSNATADSRIDDLLdlnagvaPTYLSDD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104320 190 YSNALLEEITSRSNSQYVLLSRIRDLSVNHKINNDYAFWQDDSFKRAYKVDYVLFDGTTYEKLWQKSYQTEGIWPYKKTE 269
Cdd:pfam16539  81 ESLRLITDLAEDTDAQYVLSGVIRDLSVEDEHSSGLGFWTDDDPQRQFALELTLYDGISGELLFQKRYRTSAPWDFERTS 160


                  ...
gi 1675104320 270 IID 272
Cdd:pfam16539 161 QVD 163
FlgT_N pfam16548
Flagellar assembly protein T, N-terminal domain; FlgT_N is the N-terminal domain of a family ...
 28-113 1.73e-19

Flagellar assembly protein T, N-terminal domain; FlgT_N is the N-terminal domain of a family of flagellar proteins that make up part of the basal body of the flagellum. The flagellum is a large macromolecular assembly composed of three major parts: the basal body, the hook, and the filament. The basal body has two unique ring structures, the T ring and the H ring. FlgT is required to form and stabilize both ring structures. FlgT-N contributes to the construction of the H-ring structure, and adopts a two-layer alpha-beta sandwich architecture composed of a four-stranded anti-parallel beta-sheet and two alpha helices.


Pssm-ID: 465169  Cd Length: 87  Bit Score: 82.36  E-value: 1.73e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1675104320  28 WFESTGHAVIKNGDtSQAKSAAIKDAITQALVFSGARVSSVQTLVDGVLTQDQLKISSHGEIQKIELISEDRHNDTYAIT 107
Cdd:pfam16548   2 WVEVTGKAAIIGND-DIAREQAREDALSQALLYAGAQVSSISSLQPLLEGSLTETQFSNGEVRNVELLSERVSDGRLTVT 80


                  ....*.
gi 1675104320 108 LRLDIF 113
Cdd:pfam16548  81 LRADIY 86
FlgT_C pfam16538
Flagellar assembly protein T, C-terminal domain; FlgT_C is the C-terminal domain of a family ...
 316-390 8.98e-19

Flagellar assembly protein T, C-terminal domain; FlgT_C is the C-terminal domain of a family of flagellar proteins that make up part of the basal body of the flagellum. The flagellum is a large macromolecular assembly composed of three major parts: the basal body, the hook, and the filament. The basal body has two unique ring structures, the T ring and the H ring. FlgT is required to form and stabilize both ring structures. FlgT_C is not essential but stabilizes the H-ring structure..


Pssm-ID: 435408  Cd Length: 77  Bit Score: 79.96  E-value: 8.98e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1675104320 316 NDRLIINLGKAHGIEQGQILNIAHHNYLTDAQGNKLPHKITTLNQVKVTQLYQQSAVAISIDQQPLPNIQINDIV 390
Cdd:pfam16538   1 GNRVTINLGRKHGVKPGDKLQLVRSAQFIDALGEPRNKLTQSDATLTVEQVYEEFAIASLVQENLAYNIQIGDIV 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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