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Conserved domains on  [gi|1693744191|ref|WP_140398777|]
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serine aminopeptidase domain-containing protein, partial [Priestia aryabhattai]

Protein Classification

alpha/beta fold hydrolase domain-containing protein( domain architecture ID 1002311)

alpha/beta fold hydrolase domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Hydrolase_4 super family cl38349
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
 3-110 1.12e-19

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


The actual alignment was detected with superfamily member pfam12146:

Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 81.11  E-value: 1.12e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693744191   3 PARTAFDWFTRDHEVIDAYVNDSNCGGIFTAGFFYDLLTGIKQI-SNLANIKlvpsnLPIYLISGEHDPVGSYTKGVlKV 81
Cdd:pfam12146 139 PNNLLPDSLSRDPEVVAAYAADPLVHGGISARTLYELLDAGERLlRRAAAIT-----VPLLLLHGGADRVVDPAGSR-EF 212

                          90       100
                  ....*....|....*....|....*....
gi 1693744191  82 YndfKKAGLQDISYRFFKECRHELLNELN 110
Cdd:pfam12146 213 Y---ERAGSTDKTLKLYPGLYHELLNEPD 238
 
Name Accession Description Interval E-value
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
 3-110 1.12e-19

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 81.11  E-value: 1.12e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693744191   3 PARTAFDWFTRDHEVIDAYVNDSNCGGIFTAGFFYDLLTGIKQI-SNLANIKlvpsnLPIYLISGEHDPVGSYTKGVlKV 81
Cdd:pfam12146 139 PNNLLPDSLSRDPEVVAAYAADPLVHGGISARTLYELLDAGERLlRRAAAIT-----VPLLLLHGGADRVVDPAGSR-EF 212

                          90       100
                  ....*....|....*....|....*....
gi 1693744191  82 YndfKKAGLQDISYRFFKECRHELLNELN 110
Cdd:pfam12146 213 Y---ERAGSTDKTLKLYPGLYHELLNEPD 238
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
20-123 1.98e-12

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 61.56  E-value: 1.98e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693744191  20 AYVNDSNCGgiFTAGFFYDLLTgikqISNLANIKLvpsnlPIYLISGEHDPVGSyTKGVLKVYNDFKKaglqDISYRFFK 99
Cdd:COG2267   133 AYRADPLLG--PSARWLRALRL----AEALARIDV-----PVLVLHGGADRVVP-PEAARRLAARLSP----DVELVLLP 196

                          90       100
                  ....*....|....*....|....
gi 1693744191 100 ECRHELLNELNKDEVIEDILNWLN 123
Cdd:COG2267   197 GARHELLNEPAREEVLAAILAWLE 220
 
Name Accession Description Interval E-value
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
 3-110 1.12e-19

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 81.11  E-value: 1.12e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693744191   3 PARTAFDWFTRDHEVIDAYVNDSNCGGIFTAGFFYDLLTGIKQI-SNLANIKlvpsnLPIYLISGEHDPVGSYTKGVlKV 81
Cdd:pfam12146 139 PNNLLPDSLSRDPEVVAAYAADPLVHGGISARTLYELLDAGERLlRRAAAIT-----VPLLLLHGGADRVVDPAGSR-EF 212

                          90       100
                  ....*....|....*....|....*....
gi 1693744191  82 YndfKKAGLQDISYRFFKECRHELLNELN 110
Cdd:pfam12146 213 Y---ERAGSTDKTLKLYPGLYHELLNEPD 238
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
20-123 1.98e-12

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 61.56  E-value: 1.98e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693744191  20 AYVNDSNCGgiFTAGFFYDLLTgikqISNLANIKLvpsnlPIYLISGEHDPVGSyTKGVLKVYNDFKKaglqDISYRFFK 99
Cdd:COG2267   133 AYRADPLLG--PSARWLRALRL----AEALARIDV-----PVLVLHGGADRVVP-PEAARRLAARLSP----DVELVLLP 196

                          90       100
                  ....*....|....*....|....
gi 1693744191 100 ECRHELLNELNKDEVIEDILNWLN 123
Cdd:COG2267   197 GARHELLNEPAREEVLAAILAWLE 220
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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