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Conserved domains on  [gi|1719555987|ref|WP_145840168|]
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S9 family peptidase [Shewanella algae]

Protein Classification

S9 family peptidase( domain architecture ID 12012107)

peptidase S9 family protein, an oligopeptidase which may cleave the prolyl bond of short peptides, similar to oligopeptidase B, which cleaves on the C-terminal side of lysyl and argininyl residues

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DPPIV_N pfam00930
Dipeptidyl peptidase IV (DPP IV) N-terminal region; This family is an alignment of the region ...
 132-456 6.04e-113

Dipeptidyl peptidase IV (DPP IV) N-terminal region; This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry.


:

Pssm-ID: 395744 [Multi-domain]  Cd Length: 352  Bit Score: 345.84  E-value: 6.04e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 132 PAAGKLYYFSLADAKVTLLPTGDAFATDAKLSPKGNFVSFVAEQNLYVLQLKDHKLTALTQDGGGAIKNAMAEFVAQEE- 210
Cdd:pfam00930  20 SYTADYYIYDLETNRVEPLPPGEGKIQDAKWSPDGDRLAFVRDNNLYVRELATGKEIQITSDGSDGIFNGVADWVYEEEv 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 211 MDRMTGYWWAPDESAIAYTRIDESGVELVTRNEIYADG--IKLTEQRYPYAGKPNVEIALGVVSLASGQTQWMDLG---S 285
Cdd:pfam00930 100 LGSNSAVWWSPDGSRLAFLRFDESEVPIITLPYYTDEGpgPEVREIKYPKAGAPNPTVELFVYDLASGKTVEVVPPddlS 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 286 EKDIYLPRVKWLPDSKhLSFQWQNRSQQQLDLRQVDSREGKgAVTLVSERSDAWVNLNHD-LYFLKQQPGFIWASERDGF 364
Cdd:pfam00930 180 DADYYITRVKWVPDGK-LLVQWLNRDQNRLKVVLCDAETGR-TVVILEETSDGWVELHQDpHFIKRDGSGFLWISERDGY 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 365 NHIYLFDDKGKVKRQLTQGKWAVDEIEHLDEKQGWVYFSGRKDSVVERHLYRVSLN-GGEIERISRRGGMH--NAVFADK 441
Cdd:pfam00930 258 NHLYLYDLDGKSPIQLTSGNWEVTSILGVDETRDLVYFTATEDSPTERHLYSVSLDsGGEPTCLTDDSGDHdySASFSPN 337

                         330
                  ....*....|....*
gi 1719555987 442 ESVYLDYFNSLSQPP 456
Cdd:pfam00930 338 GSYYVLTYSGPDTPP 352
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
496-743 6.01e-63

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


:

Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 210.26  E-value: 6.01e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 496 TLKAKDGKALQYRLFKPvnfDSQAKYPVVVRVYGGPHAQlvvnsWSEQDYYTQYLLQQGFAVFQLDNRGSAHRGtafeqv 575
Cdd:COG1506     1 TFKSADGTTLPGWLYLP---ADGKKYPVVVYVHGGPGSR-----DDSFLPLAQALASRGYAVLAPDYRGYGESA------ 66

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 576 iyRHLGEAEVEDQKTGVDFLRTLPWVKADSIAIYGHSYGGYMALMSLFKAPDYFKAAISGAPVTDWALYDT---HYTERY 652
Cdd:COG1506    67 --GDWGGDEVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGVSDLRSYYGttrEYTERL 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 653 LGHPDDNARGYEASSVFPYVSKYGSGLLMYHGMADDNVLFENSTRVYKALQDEGKLFRMIDYPGSKHSMRGdKVRTHLYR 732
Cdd:COG1506   145 MGGPWEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSG-AGAPDYLE 223

                         250
                  ....*....|.
gi 1719555987 733 SLTDFLETELK 743
Cdd:COG1506   224 RILDFLDRHLK 234
COG4946 super family cl27624
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ...
 36-195 8.69e-04

Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];


The actual alignment was detected with superfamily member COG4946:

Pssm-ID: 443973 [Multi-domain]  Cd Length: 1072  Bit Score: 42.72  E-value: 8.69e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987   36 RLYSSPALAgASPRglkLSPDGKRVTYLAGRKDNQyfyDLWQMDVATGQvsllldasrleagelsdeekARR-----ERQ 110
Cdd:COG4946     55 RLTSHPGYE-SFPR---FSPDGKWIAFTSDYDGNT---DVYVMPAEGGE--------------------PKRltyhpAND 107

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987  111 RVYGqgimeyfWADDSQALL--------IPAAGKLYYFSLADAKVTLLPTGDAFatDAKLSPKGNFVSFV---------- 172
Cdd:COG4946    108 RVVG-------WTPDGKSVLfasnrgspPSRSNQLYTVPVDGGLPERLPLPPAG--DGSFSPDGKKLAYTrigrefrtwk 178

                          170       180
                   ....*....|....*....|....*...
gi 1719555987  173 -----AEQNLYVLQLKDHKLTALTQDGG 195
Cdd:COG4946    179 ryrggTAGDIWIYDLGTGEFTRLTDFGG 206
 
Name Accession Description Interval E-value
DPPIV_N pfam00930
Dipeptidyl peptidase IV (DPP IV) N-terminal region; This family is an alignment of the region ...
 132-456 6.04e-113

Dipeptidyl peptidase IV (DPP IV) N-terminal region; This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry.


Pssm-ID: 395744 [Multi-domain]  Cd Length: 352  Bit Score: 345.84  E-value: 6.04e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 132 PAAGKLYYFSLADAKVTLLPTGDAFATDAKLSPKGNFVSFVAEQNLYVLQLKDHKLTALTQDGGGAIKNAMAEFVAQEE- 210
Cdd:pfam00930  20 SYTADYYIYDLETNRVEPLPPGEGKIQDAKWSPDGDRLAFVRDNNLYVRELATGKEIQITSDGSDGIFNGVADWVYEEEv 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 211 MDRMTGYWWAPDESAIAYTRIDESGVELVTRNEIYADG--IKLTEQRYPYAGKPNVEIALGVVSLASGQTQWMDLG---S 285
Cdd:pfam00930 100 LGSNSAVWWSPDGSRLAFLRFDESEVPIITLPYYTDEGpgPEVREIKYPKAGAPNPTVELFVYDLASGKTVEVVPPddlS 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 286 EKDIYLPRVKWLPDSKhLSFQWQNRSQQQLDLRQVDSREGKgAVTLVSERSDAWVNLNHD-LYFLKQQPGFIWASERDGF 364
Cdd:pfam00930 180 DADYYITRVKWVPDGK-LLVQWLNRDQNRLKVVLCDAETGR-TVVILEETSDGWVELHQDpHFIKRDGSGFLWISERDGY 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 365 NHIYLFDDKGKVKRQLTQGKWAVDEIEHLDEKQGWVYFSGRKDSVVERHLYRVSLN-GGEIERISRRGGMH--NAVFADK 441
Cdd:pfam00930 258 NHLYLYDLDGKSPIQLTSGNWEVTSILGVDETRDLVYFTATEDSPTERHLYSVSLDsGGEPTCLTDDSGDHdySASFSPN 337

                         330
                  ....*....|....*
gi 1719555987 442 ESVYLDYFNSLSQPP 456
Cdd:pfam00930 338 GSYYVLTYSGPDTPP 352
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
496-743 6.01e-63

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 210.26  E-value: 6.01e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 496 TLKAKDGKALQYRLFKPvnfDSQAKYPVVVRVYGGPHAQlvvnsWSEQDYYTQYLLQQGFAVFQLDNRGSAHRGtafeqv 575
Cdd:COG1506     1 TFKSADGTTLPGWLYLP---ADGKKYPVVVYVHGGPGSR-----DDSFLPLAQALASRGYAVLAPDYRGYGESA------ 66

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 576 iyRHLGEAEVEDQKTGVDFLRTLPWVKADSIAIYGHSYGGYMALMSLFKAPDYFKAAISGAPVTDWALYDT---HYTERY 652
Cdd:COG1506    67 --GDWGGDEVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGVSDLRSYYGttrEYTERL 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 653 LGHPDDNARGYEASSVFPYVSKYGSGLLMYHGMADDNVLFENSTRVYKALQDEGKLFRMIDYPGSKHSMRGdKVRTHLYR 732
Cdd:COG1506   145 MGGPWEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSG-AGAPDYLE 223

                         250
                  ....*....|.
gi 1719555987 733 SLTDFLETELK 743
Cdd:COG1506   224 RILDFLDRHLK 234
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
544-744 5.62e-60

Prolyl oligopeptidase family;


Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 201.30  E-value: 5.62e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 544 DYYTQYLLQQGFAVFQLDNRGSAHRGTAFEQVIYRHLGEAEVEDQKTGVDFLRTLPWVKADSIAIYGHSYGGYMALMSLF 623
Cdd:pfam00326   4 SWNAQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQGYTDPDRLAIWGGSYGGYLTGAALN 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 624 KAPDYFKAAISGAPVTDWALYDTH----YTERYLGH--PDDNARGYEA-SSVFPY--VSKYGSgLLMYHGMADDNVLFEN 694
Cdd:pfam00326  84 QRPDLFKAAVAHVPVVDWLAYMSDtslpFTERYMEWgnPWDNEEGYDYlSPYSPAdnVKVYPP-LLLIHGLLDDRVPPWQ 162

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1719555987 695 STRVYKALQDEGKLFRMIDYPGSKHSMRGDKVRTHLYRSLTDFLETELKG 744
Cdd:pfam00326 163 SLKLVAALQRKGVPFLLLIFPDEGHGIGKPRNKVEEYARELAFLLEYLGG 212
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
 356-432 1.86e-05

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 45.43  E-value: 1.86e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1719555987 356 IWASERDGFNHIYLFDDKGKVKRQLTQGKWAVDEIEHL-DEKqgWVYF-SGRKDSvveRHLYRVSLNGGEIERISRRGG 432
Cdd:COG0823     2 AFTLSRDGNSDIYVVDLDGGEPRRLTNSPGIDTSPAWSpDGR--RIAFtSDRGGG---PQIYVVDADGGEPRRLTFGGG 75
COG4946 COG4946
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ...
 36-195 8.69e-04

Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];


Pssm-ID: 443973 [Multi-domain]  Cd Length: 1072  Bit Score: 42.72  E-value: 8.69e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987   36 RLYSSPALAgASPRglkLSPDGKRVTYLAGRKDNQyfyDLWQMDVATGQvsllldasrleagelsdeekARR-----ERQ 110
Cdd:COG4946     55 RLTSHPGYE-SFPR---FSPDGKWIAFTSDYDGNT---DVYVMPAEGGE--------------------PKRltyhpAND 107

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987  111 RVYGqgimeyfWADDSQALL--------IPAAGKLYYFSLADAKVTLLPTGDAFatDAKLSPKGNFVSFV---------- 172
Cdd:COG4946    108 RVVG-------WTPDGKSVLfasnrgspPSRSNQLYTVPVDGGLPERLPLPPAG--DGSFSPDGKKLAYTrigrefrtwk 178

                          170       180
                   ....*....|....*....|....*...
gi 1719555987  173 -----AEQNLYVLQLKDHKLTALTQDGG 195
Cdd:COG4946    179 ryrggTAGDIWIYDLGTGEFTRLTDFGG 206
 
Name Accession Description Interval E-value
DPPIV_N pfam00930
Dipeptidyl peptidase IV (DPP IV) N-terminal region; This family is an alignment of the region ...
 132-456 6.04e-113

Dipeptidyl peptidase IV (DPP IV) N-terminal region; This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry.


Pssm-ID: 395744 [Multi-domain]  Cd Length: 352  Bit Score: 345.84  E-value: 6.04e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 132 PAAGKLYYFSLADAKVTLLPTGDAFATDAKLSPKGNFVSFVAEQNLYVLQLKDHKLTALTQDGGGAIKNAMAEFVAQEE- 210
Cdd:pfam00930  20 SYTADYYIYDLETNRVEPLPPGEGKIQDAKWSPDGDRLAFVRDNNLYVRELATGKEIQITSDGSDGIFNGVADWVYEEEv 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 211 MDRMTGYWWAPDESAIAYTRIDESGVELVTRNEIYADG--IKLTEQRYPYAGKPNVEIALGVVSLASGQTQWMDLG---S 285
Cdd:pfam00930 100 LGSNSAVWWSPDGSRLAFLRFDESEVPIITLPYYTDEGpgPEVREIKYPKAGAPNPTVELFVYDLASGKTVEVVPPddlS 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 286 EKDIYLPRVKWLPDSKhLSFQWQNRSQQQLDLRQVDSREGKgAVTLVSERSDAWVNLNHD-LYFLKQQPGFIWASERDGF 364
Cdd:pfam00930 180 DADYYITRVKWVPDGK-LLVQWLNRDQNRLKVVLCDAETGR-TVVILEETSDGWVELHQDpHFIKRDGSGFLWISERDGY 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 365 NHIYLFDDKGKVKRQLTQGKWAVDEIEHLDEKQGWVYFSGRKDSVVERHLYRVSLN-GGEIERISRRGGMH--NAVFADK 441
Cdd:pfam00930 258 NHLYLYDLDGKSPIQLTSGNWEVTSILGVDETRDLVYFTATEDSPTERHLYSVSLDsGGEPTCLTDDSGDHdySASFSPN 337

                         330
                  ....*....|....*
gi 1719555987 442 ESVYLDYFNSLSQPP 456
Cdd:pfam00930 338 GSYYVLTYSGPDTPP 352
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
496-743 6.01e-63

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 210.26  E-value: 6.01e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 496 TLKAKDGKALQYRLFKPvnfDSQAKYPVVVRVYGGPHAQlvvnsWSEQDYYTQYLLQQGFAVFQLDNRGSAHRGtafeqv 575
Cdd:COG1506     1 TFKSADGTTLPGWLYLP---ADGKKYPVVVYVHGGPGSR-----DDSFLPLAQALASRGYAVLAPDYRGYGESA------ 66

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 576 iyRHLGEAEVEDQKTGVDFLRTLPWVKADSIAIYGHSYGGYMALMSLFKAPDYFKAAISGAPVTDWALYDT---HYTERY 652
Cdd:COG1506    67 --GDWGGDEVDDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGVSDLRSYYGttrEYTERL 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 653 LGHPDDNARGYEASSVFPYVSKYGSGLLMYHGMADDNVLFENSTRVYKALQDEGKLFRMIDYPGSKHSMRGdKVRTHLYR 732
Cdd:COG1506   145 MGGPWEDPEAYAARSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFSG-AGAPDYLE 223

                         250
                  ....*....|.
gi 1719555987 733 SLTDFLETELK 743
Cdd:COG1506   224 RILDFLDRHLK 234
Peptidase_S9 pfam00326
Prolyl oligopeptidase family;
544-744 5.62e-60

Prolyl oligopeptidase family;


Pssm-ID: 459761 [Multi-domain]  Cd Length: 213  Bit Score: 201.30  E-value: 5.62e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 544 DYYTQYLLQQGFAVFQLDNRGSAHRGTAFEQVIYRHLGEAEVEDQKTGVDFLRTLPWVKADSIAIYGHSYGGYMALMSLF 623
Cdd:pfam00326   4 SWNAQLLADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQGYTDPDRLAIWGGSYGGYLTGAALN 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 624 KAPDYFKAAISGAPVTDWALYDTH----YTERYLGH--PDDNARGYEA-SSVFPY--VSKYGSgLLMYHGMADDNVLFEN 694
Cdd:pfam00326  84 QRPDLFKAAVAHVPVVDWLAYMSDtslpFTERYMEWgnPWDNEEGYDYlSPYSPAdnVKVYPP-LLLIHGLLDDRVPPWQ 162

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1719555987 695 STRVYKALQDEGKLFRMIDYPGSKHSMRGDKVRTHLYRSLTDFLETELKG 744
Cdd:pfam00326 163 SLKLVAALQRKGVPFLLLIFPDEGHGIGKPRNKVEEYARELAFLLEYLGG 212
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
496-721 3.12e-14

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 72.69  E-value: 3.12e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 496 TLKAKDGKALQYRLFKPvnfDSQAKYPVVVrvyggphaqLVVNSWSEQDYY---TQYLLQQGFAVFQLD---NRGSAHRG 569
Cdd:COG0412     7 TIPTPDGVTLPGYLARP---AGGGPRPGVV---------VLHEIFGLNPHIrdvARRLAAAGYVVLAPDlygRGGPGDDP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 570 TAFEQVIYRHLGEAEVEDQKTGVDFLRTLPWVKADSIAIYGHSYGGYMALMSLFKAPDyFKAAISgapvtdwalydthyt 649
Cdd:COG0412    75 DEARALMGALDPELLAADLRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAAARGPD-LAAAVS--------------- 138

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1719555987 650 erYLGHPDDNARGYEASSV-FPyvskygsgLLMYHGMADDNVLFENSTRVYKALQDEGKLFRMIDYPGSKHSM 721
Cdd:COG0412   139 --FYGGLPADDLLDLAARIkAP--------VLLLYGEKDPLVPPEQVAALEAALAAAGVDVELHVYPGAGHGF 201
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
492-739 3.59e-14

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 72.34  E-value: 3.59e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 492 PEFGTLKAKDGKALQYRLFKPvnfDSQAKYPVVVrVYG-GPHAqlvvNSWSEqdyYTQYLLQQGFAVFQLDNRGsaHRGT 570
Cdd:COG2267     3 RRLVTLPTRDGLRLRGRRWRP---AGSPRGTVVL-VHGlGEHS----GRYAE---LAEALAAAGYAVLAFDLRG--HGRS 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 571 AFEQVIYRHLgEAEVEDQKTGVDFLRTLPwvkADSIAIYGHSYGGYMALMSLFKAPDYFKAAISGAPvtdwalydthyte 650
Cdd:COG2267    70 DGPRGHVDSF-DDYVDDLRAALDALRARP---GLPVVLLGHSMGGLIALLYAARYPDRVAGLVLLAP------------- 132

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 651 RYLGHPDD--NARGYEASSVFPYVSKYGSGLLMYHGMADDNVLFENSTRVYKALQDEGKLFRmidYPGSKHSMRGDKVRT 728
Cdd:COG2267   133 AYRADPLLgpSARWLRALRLAEALARIDVPVLVLHGGADRVVPPEAARRLAARLSPDVELVL---LPGARHELLNEPARE 209

                         250
                  ....*....|.
gi 1719555987 729 HLYRSLTDFLE 739
Cdd:COG2267   210 EVLAAILAWLE 220
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
 496-742 4.53e-13

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 69.94  E-value: 4.53e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 496 TLKAKDGKALQYRLFKPVNfdSQAKYPVVVrvYGGPHAQlVVNSWSEqdyYTQYLLQQGFAVFQLDNRGS-AHRGTafeq 574
Cdd:COG1073    14 TFKSRDGIKLAGDLYLPAG--ASKKYPAVV--VAHGNGG-VKEQRAL---YAQRLAELGFNVLAFDYRGYgESEGE---- 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 575 viYRHLGEAEVEDQKTGVDFLRTLPWVKADSIAIYGHSYGGYMALMSLFKAPDyFKAAISGAPVTD-WALYDTHYTERYL 653
Cdd:COG1073    82 --PREEGSPERRDARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPR-VKAVILDSPFTSlEDLAAQRAKEARG 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 654 GHPDDNARGYEAS---------SVFPYVSKYGSGLLMYHGMADDNVLFENSTRVYKALQDEGKLFRmidYPGSKHSMRGD 724
Cdd:COG1073   159 AYLPGVPYLPNVRlasllndefDPLAKIEKISRPLLFIHGEKDEAVPFYMSEDLYEAAAEPKELLI---VPGAGHVDLYD 235

                         250
                  ....*....|....*...
gi 1719555987 725 KVRTHLYRSLTDFLETEL 742
Cdd:COG1073   236 RPEEEYFDKLAEFFKKNL 253
COG4099 COG4099
Predicted peptidase [General function prediction only];
499-719 3.99e-11

Predicted peptidase [General function prediction only];


Pssm-ID: 443275 [Multi-domain]  Cd Length: 235  Bit Score: 63.83  E-value: 3.99e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 499 AKDGKALQYRLFKPVNFDSQAKYPVVVRVYGG------PHAQLVV--NSWSEQDYYTQYllqqGFAVF--QldnrgsAHR 568
Cdd:COG4099    27 PSDGDTLPYRLYLPKGYDPGKKYPLVLFLHGAgergtdNEKQLTHgaPKFINPENQAKF----PAIVLapQ------CPE 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 569 GTAFEQVIYRHLGEAEVEDqktgvdFLRTLPwVKADSIAIYGHSYGGYMALMSLFKAPDYFKAA--ISGAPvtdwalyDT 646
Cdd:COG4099    97 DDYWSDTKALDAVLALLDD------LIAEYR-IDPDRIYLTGLSMGGYGTWDLAARYPDLFAAAvpICGGG-------DP 162

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1719555987 647 HYTERYLGHPddnargyeassvfpyvskygsgLLMYHGMADDNVLFENSTRVYKALQDEGKLFRMIDYPGSKH 719
Cdd:COG4099   163 ANAANLKKVP----------------------VWIFHGAKDDVVPVEESRAMVEALKAAGADVKYTEYPGVGH 213
BD-FAE pfam20434
BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, ...
 516-702 1.11e-10

BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, previously known as bifunctional carbohydrate esterase (CE)), which is active on complex natural xylans and was identified as the basis of a monophyletic clade gathering all homologs identified in PULs (polysaccharide utilization loci) predicted to act on xylan. It adopts an alpha-beta-hydrolase fold with the catalytic triad Ser-Asp-His. This new family of proteins is a new candidate for biomass processing due to its capacity to remove ferulic acid and acetic acid from natural corn and birchwood xylan substrates.


Pssm-ID: 466583 [Multi-domain]  Cd Length: 215  Bit Score: 61.81  E-value: 1.11e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 516 DSQAKYPVVVRVYGGphAQLVVNSWSEQDYYT---QYLLQQGFAVFQLDnrgsahrgtafeqviYRHLGE----AEVEDQ 588
Cdd:pfam20434   8 NAKGPYPVVIWIHGG--GWNSGDKEADMGFMTntvKALLKAGYAVASIN---------------YRLSTDakfpAQIQDV 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 589 KTGVDFLR----TLPwVKADSIAIYGHSYGGYMALMS---------LFKAPDYF----------KAAISGAPVTD-WALY 644
Cdd:pfam20434  71 KAAIRFLRanaaKYG-IDTNKIALMGFSAGGHLALLAglsnnnkefEGNVGDYTpesskesfkvNAVVDFYGPTDlLDMD 149

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1719555987 645 --DTHYTERYL------GHPDDNARGYEASSVFPYVSKYGSGLLMYHGMADDNVLFENSTRVYKAL 702
Cdd:pfam20434 150 scGTHNDAKSPetlllgAPPLENPDLAKSASPITYVDKNDPPFLIIHGDKDPLVPYCQSVLLHEKL 215
Fes COG2382
Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];
502-738 3.31e-07

Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];


Pssm-ID: 441948 [Multi-domain]  Cd Length: 314  Bit Score: 52.93  E-value: 3.31e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 502 GKALQYRLFKPVNFD-SQAKYPVVVRVYGGPHaqlvvnswSEQDYytqylLQQGFAVFQLDNRGSAHRGTAFeqVI---- 576
Cdd:COG2382    92 GRTRRVWVYLPPGYDnPGKKYPVLYLLDGGGG--------DEQDW-----FDQGRLPTILDNLIAAGKIPPM--IVvmpd 156

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 577 YRHLGEAEVEDQKTG--VDFLRT--LPWVKA--------DSIAIYGHSYGGYMALMSLFKAPDYFKAAI--SGAPVTDWA 642
Cdd:COG2382   157 GGDGGDRGTEGPGNDafERFLAEelIPFVEKnyrvsadpEHRAIAGLSMGGLAALYAALRHPDLFGYVGsfSGSFWWPPG 236

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 643 LYDTHYTERYLGHPDDNargyeassvfpyvskygSGLLMYHGMADDNVLFENSTRVYKALQDEGKLFRMIDYPGsKHSMR 722
Cdd:COG2382   237 DADRGGWAELLAAGAPK-----------------KPLRFYLDVGTEDDLLEANRALAAALKAKGYDVEYREFPG-GHDWA 298

                         250
                  ....*....|....*.
gi 1719555987 723 GdkVRTHLYRSLTDFL 738
Cdd:COG2382   299 V--WRAALPDFLPWLF 312
FrmB COG0627
S-formylglutathione hydrolase FrmB [Defense mechanisms];
602-720 8.21e-07

S-formylglutathione hydrolase FrmB [Defense mechanisms];


Pssm-ID: 440392 [Multi-domain]  Cd Length: 249  Bit Score: 50.99  E-value: 8.21e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 602 KADSIAIYGHSYGGYMALMSLFKAPDYFKA--AISGAPVTDWALYDTHYTERYLGHPDDNArgYEASSVFPYVSKYGSG- 678
Cdd:COG0627   111 DRERRAIAGLSMGGHGALTLALRHPDLFRAvaAFSGILDPSQPPWGEKAFDAYFGPPDRAA--WAANDPLALAEKLRAGl 188

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1719555987 679 -LLMYHGmADDNVLFENSTRVYKALQDEGKLFRMIDYPGsKHS 720
Cdd:COG0627   189 pLYIDCG-TADPFFLEANRQLHAALRAAGIPHTYRERPG-GHS 229
Aes COG0657
Acetyl esterase/lipase [Lipid transport and metabolism];
508-743 2.67e-06

Acetyl esterase/lipase [Lipid transport and metabolism];


Pssm-ID: 440422 [Multi-domain]  Cd Length: 207  Bit Score: 48.72  E-value: 2.67e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 508 RLFKPVnfDSQAKYPVVVRVYGGphaQLVVNSWSEQDYYTQYLL-QQGFAVFQLDnrgsahrgtafeqviYRHLGE---- 582
Cdd:COG0657     2 DVYRPA--GAKGPLPVVVYFHGG---GWVSGSKDTHDPLARRLAaRAGAAVVSVD---------------YRLAPEhpfp 61

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 583 AEVEDQKTGVDFLRTLP---WVKADSIAIYGHSYGGYMALMSLFKAPDY----FKAAISGAPVTDwalydthyterylgh 655
Cdd:COG0657    62 AALEDAYAALRWLRANAaelGIDPDRIAVAGDSAGGHLAAALALRARDRggprPAAQVLIYPVLD--------------- 126

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 656 pddnargYEASSVFPYVskygSGL---LMYHGMADdnVLFENSTRVYKALQDEGKLFRMIDYPGSKH---SMRGDKVRTH 729
Cdd:COG0657   127 -------LTASPLRADL----AGLpptLIVTGEAD--PLVDESEALAAALRAAGVPVELHVYPGGGHgfgLLAGLPEARA 193

                         250
                  ....*....|....
gi 1719555987 730 LYRSLTDFLETELK 743
Cdd:COG0657   194 ALAEIAAFLRRALA 207
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
 547-644 4.15e-06

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 48.75  E-value: 4.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 547 TQYLLQQGFAVFQLDNRG---SA-HRG--TAFEQViyrhlgeaeVEDQKTGVDFLRTL-PWVKadsIAIYGHSYGGYMAL 619
Cdd:pfam12146  24 ADALAAQGFAVYAYDHRGhgrSDgKRGhvPSFDDY---------VDDLDTFVDKIREEhPGLP---LFLLGHSMGGLIAA 91

                          90       100
                  ....*....|....*....|....*
gi 1719555987 620 MSLFKAPDYFKAAISGAPVTDWALY 644
Cdd:pfam12146  92 LYALRYPDKVDGLILSAPALKIKPY 116
COG2936 COG2936
Predicted acyl esterase [General function prediction only];
501-648 5.37e-06

Predicted acyl esterase [General function prediction only];


Pssm-ID: 442179 [Multi-domain]  Cd Length: 555  Bit Score: 49.92  E-value: 5.37e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 501 DGKALQYRLFKPVnfDSQAKYPVVV-------RVYGGPHAQLVVNswseqdyytqYLLQQGFAVFQLDNRGSaHR--GTa 571
Cdd:COG2936    21 DGVRLAADIYRPK--DAEGPVPVILertpygkRDGTAGRDLGPHP----------YFAERGYAVVVQDVRGT-GGseGE- 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1719555987 572 feqviYRHLGEAEVEDQKTGVDFLRTLPWvkAD-SIAIYGHSYGGYMALMSLFKAPDYFKAAISGAPVTDWalY-DTHY 648
Cdd:COG2936    87 -----FDPYRVDEQTDGYDTIDWLAKQPW--SNgKVGMIGISYGGFTQLAAAADRPPALKAIVPQAPTSDR--YdDDHY 156
Axe1 COG3458
Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, ...
 518-675 8.00e-06

Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442681 [Multi-domain]  Cd Length: 318  Bit Score: 48.65  E-value: 8.00e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 518 QAKYPVVVRV--YGG----PHAQLvvnSWSEQdyytqyllqqGFAVFQLDNRG-----------SAHRGTAF-------- 572
Cdd:COG3458    79 EGPLPAVVEFhgYGGgrglPHEDL---DWAAA----------GYAVLVMDTRGqgsswgdtpdpGGYSGGALpgymtrgi 145

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 573 ---EQVIYRHLgeaeVEDQKTGVDFLRTLPWVKADSIAIYGHSYGGYMALMSLFKAPDyFKAAISGAPvtdwALydTHYT 649
Cdd:COG3458   146 ddpDTYYYRRV----YLDAVRAVDALRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAAAADVP----FL--CDFR 214

                         170       180
                  ....*....|....*....|....*.
gi 1719555987 650 eRYLGHPDdnARGYEasSVFPYVSKY 675
Cdd:COG3458   215 -RALELGR--AGPYP--EIRRYLRRH 235
Peptidase_S15 pfam02129
X-Pro dipeptidyl-peptidase (S15 family);
501-720 1.27e-05

X-Pro dipeptidyl-peptidase (S15 family);


Pssm-ID: 396621 [Multi-domain]  Cd Length: 264  Bit Score: 47.33  E-value: 1.27e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 501 DGKALQYRLFKPVnfDSQAKYPVVVR--VYGGPhaqlvvNSWSEQDYYT---QYLLQQGFAVFQLDNRGSAHRGTAFEQv 575
Cdd:pfam02129   1 DGVRLAADIYRPT--KTGGPVPALLTrsPYGAR------RDGASDLALAhpeWEFAARGYAVVYQDVRGTGGSEGVFTV- 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 576 iyrhLGEAEVEDQKTGVDFLRTLPWVkADSIAIYGHSYGGYMALMSLFKAPDYFKAAISGAPVTDWALY----------- 644
Cdd:pfam02129  72 ----GGPQEAADGKDVIDWLAGQPWC-NGKVGMTGISYLGTTQLAAAATGPPGLKAIAPESGISDLYDYyreggavrapg 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 645 --------------------------------------------DTHYTERYLGHPDDNARgYEASSVFPYVSKYGSGLL 680
Cdd:pfam02129 147 glgwedldllaealtsrraddgdayraaaryeaagdellaeldrQLFLLEWLLQTGDYDAF-WQDRNYLEDADKVKAPVL 225

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1719555987 681 MYHGMADDNVLfENSTRVYKALQDEGKLFRMIDYPGSkHS 720
Cdd:pfam02129 226 LVGGWQDWNVK-NGAIKLYEALRAPGVKKKLILGPWT-HV 263
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
 356-432 1.86e-05

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 45.43  E-value: 1.86e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1719555987 356 IWASERDGFNHIYLFDDKGKVKRQLTQGKWAVDEIEHL-DEKqgWVYF-SGRKDSvveRHLYRVSLNGGEIERISRRGG 432
Cdd:COG0823     2 AFTLSRDGNSDIYVVDLDGGEPRRLTNSPGIDTSPAWSpDGR--RIAFtSDRGGG---PQIYVVDADGGEPRRLTFGGG 75
YbbA COG2819
Predicted hydrolase of the alpha/beta superfamily [General function prediction only];
593-637 4.24e-05

Predicted hydrolase of the alpha/beta superfamily [General function prediction only];


Pssm-ID: 442067 [Multi-domain]  Cd Length: 250  Bit Score: 45.75  E-value: 4.24e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1719555987 593 DFLRT--LPWV------KADSIAIYGHSYGGYMALMSLFKAPDYFKAAISGAP 637
Cdd:COG2819   111 RFLEEelKPYIdkryrtDPERTGLIGHSLGGLFSLYALLKYPDLFGRYIAISP 163
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
 522-646 6.90e-05

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 45.19  E-value: 6.90e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 522 PVVVRVYGGPHaqlVVNSWSEQDYYtqyLLQQGFAVFQLDNRGSAHRGTAFEQVIYRHLGEAEVEDQktgvdFLRTLPWv 601
Cdd:pfam00561   1 PPVLLLHGLPG---SSDLWRKLAPA---LARDGFRVIALDLRGFGKSSRPKAQDDYRTDDLAEDLEY-----ILEALGL- 68

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1719555987 602 kaDSIAIYGHSYGGYMALMSLFKAPDYFKAAISGAPVTDWALYDT 646
Cdd:pfam00561  69 --EKVNLVGHSMGGLIALAYAAKYPDRVKALVLLGALDPPHELDE 111
COG4188 COG4188
Predicted dienelactone hydrolase [General function prediction only];
511-620 3.17e-04

Predicted dienelactone hydrolase [General function prediction only];


Pssm-ID: 443342 [Multi-domain]  Cd Length: 326  Bit Score: 43.56  E-value: 3.17e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 511 KPVNFDSQAKYPVVVrV---YGGphaqlvvnSWSEQDYYTQYLLQQGFAVFQLDNRGS-AHRGTAFEQVIYRHLGEAE-- 584
Cdd:COG4188    52 APADAPAGGPFPLVV-LshgLGG--------SREGYAYLAEHLASHGYVVAAPDHPGSnAADLSAALDGLADALDPEElw 122

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1719555987 585 --VEDQKTGVDFLRTL-----PW---VKADSIAIYGHSYGGYMALM 620
Cdd:COG4188   123 erPLDLSFVLDQLLALnksdpPLagrLDLDRIGVIGHSLGGYTALA 168
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
 137-242 8.32e-04

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 40.81  E-value: 8.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 137 LYYFSLADAKVTLLPTGDAFATDAKLSPKGNFVSFVAE----QNLYVLQLKDHKLTALTQDGGgaiknamaefvaqeemd 212
Cdd:COG0823    13 IYVVDLDGGEPRRLTNSPGIDTSPAWSPDGRRIAFTSDrgggPQIYVVDADGGEPRRLTFGGG----------------- 75

                          90       100       110
                  ....*....|....*....|....*....|
gi 1719555987 213 RMTGYWWAPDESAIAYTRIDESGVELVTRN 242
Cdd:COG0823    76 YNASPSWSPDGKRLAFVSRSDGRFDIYVLD 105
COG4946 COG4946
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ...
 36-195 8.69e-04

Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];


Pssm-ID: 443973 [Multi-domain]  Cd Length: 1072  Bit Score: 42.72  E-value: 8.69e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987   36 RLYSSPALAgASPRglkLSPDGKRVTYLAGRKDNQyfyDLWQMDVATGQvsllldasrleagelsdeekARR-----ERQ 110
Cdd:COG4946     55 RLTSHPGYE-SFPR---FSPDGKWIAFTSDYDGNT---DVYVMPAEGGE--------------------PKRltyhpAND 107

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987  111 RVYGqgimeyfWADDSQALL--------IPAAGKLYYFSLADAKVTLLPTGDAFatDAKLSPKGNFVSFV---------- 172
Cdd:COG4946    108 RVVG-------WTPDGKSVLfasnrgspPSRSNQLYTVPVDGGLPERLPLPPAG--DGSFSPDGKKLAYTrigrefrtwk 178

                          170       180
                   ....*....|....*....|....*...
gi 1719555987  173 -----AEQNLYVLQLKDHKLTALTQDGG 195
Cdd:COG4946    179 ryrggTAGDIWIYDLGTGEFTRLTDFGG 206
COG4946 COG4946
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ...
 49-176 1.56e-03

Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];


Pssm-ID: 443973 [Multi-domain]  Cd Length: 1072  Bit Score: 41.95  E-value: 1.56e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987   49 RGLKLSPDGKRVTYLAGRkdnqyfYDLWQMDVATGQVSLLLDASrleagelsdeekarrerqrvYGQGIMEYFWADDSQA 128
Cdd:COG4946    392 FNPVWSPDGKKIAFTDNR------GRLWVVDLASGKVRKVDTDG--------------------YGDGISDLAWSPDSKW 445

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1719555987  129 LLIPAAG-------KLYyfSLADAKVTLLPTGDAFATDAKLSPKGNFVSFVAEQN 176
Cdd:COG4946    446 LAYSKPGpnqlsqiFLY--DVETGKTVQLTDGRYDDGSPAFSPDGKYLYFLSSRD 498
Esterase pfam00756
Putative esterase; This family contains Esterase D. However it is not clear if all members of ...
 508-640 1.69e-03

Putative esterase; This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family.


Pssm-ID: 395613 [Multi-domain]  Cd Length: 246  Bit Score: 40.91  E-value: 1.69e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 508 RLFKPVNFDSQAKYPVVVRVYGGPHAQLvvnsWSEQDYYTQYLLQQGFAVFQLDnrgSAHRGTAFEQVIYRHLGEAEVED 587
Cdd:pfam00756  11 QVYLPEDYPPGRKYPVLYLLDGTGWFQN----GPAKEGLDRLAASGEIPPVIIV---GSPRGGEVSFYSDWDRGLNATEG 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1719555987 588 QKTG--VDFLRT--LPWVKA------DSIAIYGHSYGGYMALMSLFKAPDYFKAAISGAPVTD 640
Cdd:pfam00756  84 PGAYayETFLTQelPPLLDAnfptapDGRALAGQSMGGLGALYLALKYPDLFGSVSSFSPILN 146
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
 296-423 1.74e-03

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 39.66  E-value: 1.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 296 WLPDSKHLSFqWQNRSQQQlDLRQVDsREGKGAVTLVSERSDAWvnlnhdlyflkqQPGF-------IWASERDGFNHIY 368
Cdd:COG0823    38 WSPDGRRIAF-TSDRGGGP-QIYVVD-ADGGEPRRLTFGGGYNA------------SPSWspdgkrlAFVSRSDGRFDIY 102

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1719555987 369 LFDDKGKVKRQLTQGK----WAVDEiehldekqGWVYFSGRKDSvvERHLYRVSLNGGE 423
Cdd:COG0823   103 VLDLDGGAPRRLTDGPgspsWSPDG--------RRIVFSSDRGG--RPDLYVVDLDGRK 151
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
 73-259 2.22e-03

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 39.27  E-value: 2.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987  73 YDLWQMDVATGQVSLLLDASRLEAG-ELS-DeekarrerqrvyGQGImeYFWADDSQALLIpaagklYYFSLADAKVTLL 150
Cdd:COG0823    11 SDIYVVDLDGGEPRRLTNSPGIDTSpAWSpD------------GRRI--AFTSDRGGGPQI------YVVDADGGEPRRL 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 151 PTGDAFATDAKLSPKGNFVSFVAEQN----LYVLQLKDHKLTALTQDGGGAIknamaefvaqeemdrmtgywWAPDESAI 226
Cdd:COG0823    71 TFGGGYNASPSWSPDGKRLAFVSRSDgrfdIYVLDLDGGAPRRLTDGPGSPS--------------------WSPDGRRI 130

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1719555987 227 AYTRiDESGvelvtRNEIYADGIKLTEQRYPYA 259
Cdd:COG0823   131 VFSS-DRGG-----RPDLYVVDLDGRKRRLTPA 157
TolB COG0823
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ...
 356-439 3.70e-03

Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440585 [Multi-domain]  Cd Length: 158  Bit Score: 38.88  E-value: 3.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1719555987 356 IWASERDGFNHIYLFDDKGKVKRQLTQGK-------WAVDeiehldekqG-WVYFSGRKDSVVErhLYRVSLNGGEIERI 427
Cdd:COG0823    46 AFTSDRGGGPQIYVVDADGGEPRRLTFGGgynaspsWSPD---------GkRLAFVSRSDGRFD--IYVLDLDGGAPRRL 114

                          90
                  ....*....|..
gi 1719555987 428 SRrgGMHNAVFA 439
Cdd:COG0823   115 TD--GPGSPSWS 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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