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Conserved domains on  [gi|1724454818|ref|WP_147197213|]
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flagellar motor stator protein MotA [Rummeliibacillus stabekisii]

Protein Classification

flagellar motor stator protein MotA( domain architecture ID 10013003)

motility protein A (MotA) is a flagellar motor stator protein which is energized by a proton (H(+)) motive force

Gene Symbol:  motA
Gene Ontology:  GO:0006935|GO:1902600|GO:0120101
PubMed:  6090403|32931735

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-259 1.99e-155

flagellar motor protein MotA; Validated


:

Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 433.23  E-value: 1.99e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   1 MDLSSIVGLIMGVVALIVGMYFKGVTPDALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTEQKLGKDTDIIK 80
Cdd:PRK08124    1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPSKEELIE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  81 LFSEWADLARREGLLALEGKVAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVL 160
Cdd:PRK08124   81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQSPEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGVL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 161 GAVVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIEQ 240
Cdd:PRK08124  161 GAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIEE 240

                         250
                  ....*....|....*....
gi 1724454818 241 KLASYLTKEDRKKILGESG 259
Cdd:PRK08124  241 KLLGYLSPKERKKLEEGAE 259
 
Name Accession Description Interval E-value
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-259 1.99e-155

flagellar motor protein MotA; Validated


Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 433.23  E-value: 1.99e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   1 MDLSSIVGLIMGVVALIVGMYFKGVTPDALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTEQKLGKDTDIIK 80
Cdd:PRK08124    1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPSKEELIE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  81 LFSEWADLARREGLLALEGKVAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVL 160
Cdd:PRK08124   81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQSPEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGVL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 161 GAVVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIEQ 240
Cdd:PRK08124  161 GAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIEE 240

                         250
                  ....*....|....*....
gi 1724454818 241 KLASYLTKEDRKKILGESG 259
Cdd:PRK08124  241 KLLGYLSPKERKKLEEGAE 259
MotA COG1291
Flagellar motor component MotA [Cell motility];
3-261 2.11e-103

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 301.22  E-value: 2.11e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   3 LSSIVGLIMGVVALIVGMYFKGVTPDALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTEQKLgKDTDIIKLF 82
Cdd:COG1291     1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKA-DYEELIELL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  83 SEWADLARREGLLALEGKVAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVLGA 162
Cdd:COG1291    80 VELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTDPEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIGT 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 163 VVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIEQKL 242
Cdd:COG1291   160 VLGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEKL 239

                         250
                  ....*....|....*....
gi 1724454818 243 ASYLTKEDRKKILGESGAS 261
Cdd:COG1291   240 RSFLPPSERPSFEEEELKG 258
MotA_ExbB pfam01618
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ...
 103-216 6.20e-32

MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.


Pssm-ID: 460268  Cd Length: 120  Bit Score: 114.11  E-value: 6.20e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 103 EIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVLGAVVGLVAALKDMND----IEK 178
Cdd:pfam01618   4 SPEDRFLKKGLQLVVDGTDPEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagpgLSA 83

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1724454818 179 LGHAISAAFIATLLGIFTGyVLWHPFANKLKRKSSNEV 216
Cdd:pfam01618  84 LAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
 
Name Accession Description Interval E-value
PRK08124 PRK08124
flagellar motor protein MotA; Validated
 1-259 1.99e-155

flagellar motor protein MotA; Validated


Pssm-ID: 181238 [Multi-domain]  Cd Length: 263  Bit Score: 433.23  E-value: 1.99e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   1 MDLSSIVGLIMGVVALIVGMYFKGVTPDALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTEQKLGKDTDIIK 80
Cdd:PRK08124    1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDPSKEELIE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  81 LFSEWADLARREGLLALEGKVAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVL 160
Cdd:PRK08124   81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQSPEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGVL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 161 GAVVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIEQ 240
Cdd:PRK08124  161 GAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIEE 240

                         250
                  ....*....|....*....
gi 1724454818 241 KLASYLTKEDRKKILGESG 259
Cdd:PRK08124  241 KLLGYLSPKERKKLEEGAE 259
MotA COG1291
Flagellar motor component MotA [Cell motility];
3-261 2.11e-103

Flagellar motor component MotA [Cell motility];


Pssm-ID: 440902 [Multi-domain]  Cd Length: 258  Bit Score: 301.22  E-value: 2.11e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   3 LSSIVGLIMGVVALIVGMYFKGVTPDALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTEQKLgKDTDIIKLF 82
Cdd:COG1291     1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKA-DYEELIELL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  83 SEWADLARREGLLALEGKVAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVLGA 162
Cdd:COG1291    80 VELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTDPEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIGT 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 163 VVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIEQKL 242
Cdd:COG1291   160 VLGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEKL 239

                         250
                  ....*....|....*....
gi 1724454818 243 ASYLTKEDRKKILGESGAS 261
Cdd:COG1291   240 RSFLPPSERPSFEEEELKG 258
motC PRK09109
flagellar motor protein; Reviewed
 1-246 1.10e-68

flagellar motor protein; Reviewed


Pssm-ID: 181654 [Multi-domain]  Cd Length: 246  Bit Score: 212.50  E-value: 1.10e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   1 MDLSSIVGLIMGVVALIVGMYFKGVTPDALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTEQKLGKDtDIIK 80
Cdd:PRK09109    1 MDVLSLIGLILAFVAIIGGQVLEGGHLGSLLNGPAFLIVIGGTLGAVLLQTPLAVFKRAFKILRWVFFPPRSDLE-GGID 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  81 LFSEWADLARREGLLALEGKVAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVL 160
Cdd:PRK09109   80 RIVEWSNTARKEGLLGLEDVADREPDPFARKGLQLLVDGAEPESIRSVLEVEIDTQEHRDLQAAKVFESMGGYAPTIGII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 161 GAVVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIEQ 240
Cdd:PRK09109  160 GAVMGLIHVMENLADPSQLGSGIAVAFVATIYGVASANLLFLPVANKLKSIIHRQSRYREMLVEGLVAIAEGENPRSIEL 239


                  ....*.
gi 1724454818 241 KLASYL 246
Cdd:PRK09109  240 KLQGYL 245
PRK06926 PRK06926
flagellar motor protein MotP; Reviewed
 2-253 8.51e-62

flagellar motor protein MotP; Reviewed


Pssm-ID: 180755 [Multi-domain]  Cd Length: 271  Bit Score: 195.70  E-value: 8.51e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   2 DLSSIVGLIMGVVALIVGMYFKGVTPD--ALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTEQKLGKDtDII 79
Cdd:PRK06926    5 DYLTPVGIFLGITIVVLGVISNSGLSGflSFIDLTSILIVTGGLCAALFISFSPKDLKLAPRVLKQAFQSQEDDVE-ELV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  80 KLFSEWADLARREGLLALEGKVAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGV 159
Cdd:PRK06926   84 QTFVSLSEKARREGLLSLEAELEEVKDPFIKKGLLLAIDGWEPETIRDIMMAEIAAMEERHRKGRRIFEKAGEYAPAWGM 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 160 LGAVVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIE 239
Cdd:PRK06926  164 IGTLVGLVLMLKNLNDPSTLGPNMAIALLTTLYGTLLANLVFLPIAAKLEEKTEEEVFVKQVIIEGVIGVQSGQNPRILE 243

                         250
                  ....*....|....
gi 1724454818 240 QKLASYLTKEDRKK 253
Cdd:PRK06926  244 EKLSVFSSKEDWTK 257
PRK08456 PRK08456
flagellar motor protein MotA; Validated
 1-253 6.28e-56

flagellar motor protein MotA; Validated


Pssm-ID: 181434 [Multi-domain]  Cd Length: 257  Bit Score: 180.31  E-value: 6.28e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   1 MDLSSIVGLIMGVVALIVGMYFKGVTPDALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTEQKLGKDtDIIK 80
Cdd:PRK08456    1 MDLSTILGMVLAVASISVGDILEGGNPLHVIHLSSFIIVVPTALFAAMTATHKKYVKAAYKELKIVFKNPGVNLN-ERIK 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  81 LFSEWADLARREGLLALEGKVAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVL 160
Cdd:PRK08456   80 QLVELATLARKDGVLALEGRVAQIEDEFLKNGLSMLVDGKDLEEIKESMEIQIEEMEEYYHGAAHYWITAGETCPTMGLV 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 161 GAVVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIEQ 240
Cdd:PRK08456  160 GAVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMGSYALFGPWGHKLKAKSKDIIKEKTVILEGILGIAEGANPRDLEE 239

                         250
                  ....*....|...
gi 1724454818 241 KLASYLTKEDRKK 253
Cdd:PRK08456  240 KLLNYLSPGEPKK 252
PRK08990 PRK08990
flagellar motor protein PomA; Reviewed
 1-252 6.89e-46

flagellar motor protein PomA; Reviewed


Pssm-ID: 181604 [Multi-domain]  Cd Length: 254  Bit Score: 154.43  E-value: 6.89e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   1 MDLSSIVGLImGVVALIVGMYFKGVTPDALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTeQKLGKDTDIIK 80
Cdd:PRK08990    1 MDLATLIGLI-GAFAFVIMAMVLGGGIGMFVDVPSILIVFGGSLFVVLMKFNLGQFFGAVKIAGKAFM-FKIDKPEDLIE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  81 LFSEWADLARREGLLALEGkvAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVL 160
Cdd:PRK08990   79 QIVEMADAARKGGFLALEE--AEISNSFMQKGVDLLVDGHDGDVVRAALEKDIALTEERHETGIGIFRAFGDVAPAMGMI 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 161 GAVVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIEQ 240
Cdd:PRK08990  157 GTLIGLVAMLSNMDDPKSIGPAMAVALLTTLYGAVLANMVAIPIADKLSLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEG 236

                         250
                  ....*....|..
gi 1724454818 241 KLASYLTKEDRK 252
Cdd:PRK08990  237 FLKNYLAEKKRK 248
MotA_ExbB pfam01618
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ...
 103-216 6.20e-32

MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.


Pssm-ID: 460268  Cd Length: 120  Bit Score: 114.11  E-value: 6.20e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 103 EIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVLGAVVGLVAALKDMND----IEK 178
Cdd:pfam01618   4 SPEDRFLKKGLQLVVDGTDPEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagpgLSA 83

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1724454818 179 LGHAISAAFIATLLGIFTGyVLWHPFANKLKRKSSNEV 216
Cdd:pfam01618  84 LAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
PRK06743 PRK06743
flagellar motor protein MotP; Reviewed
 8-254 7.46e-29

flagellar motor protein MotP; Reviewed


Pssm-ID: 136027  Cd Length: 254  Bit Score: 110.06  E-value: 7.46e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   8 GLIMGVVALIVGMYFKGVTPDALMN---PAAIFIIILGTMATVTIAFPMSELKRLPK-LFKILF-TEQKLGKDTDiikLF 82
Cdd:PRK06743    2 GIIVGFAIVIAAIMLGGGGIKAFKNfldVSSILIVIGGTTATIVVAYRFGEIKKYTKsIFTVLHrREEDLEQLTD---LF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  83 SEWADLARREGLLALEGKVAEIDDPFLKNGLSLAIDGQNADYIRDVLSEEVEAMEERHSAGAGMFTQAGTYAPTLGVLGA 162
Cdd:PRK06743   79 VDFSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEDELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGT 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 163 VVGLVAALKDMNDIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQKMLMIEGILSVLEGEAPRVIEQKL 242
Cdd:PRK06743  159 LIGLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKL 238

                         250
                  ....*....|..
gi 1724454818 243 ASYLTKEDRKKI 254
Cdd:PRK06743  239 DTYVYETKIKKV 250
PRK09110 PRK09110
flagellar motor stator protein MotA;
6-237 7.00e-17

flagellar motor stator protein MotA;


Pssm-ID: 181655 [Multi-domain]  Cd Length: 283  Bit Score: 78.28  E-value: 7.00e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   6 IVGLIMgVVALIVGMY-FKGVTPDALMNPAAiFIIILGT-MATVTIAFPMSELKRLPKLFKILFTEQKLGKD--TDIIKL 81
Cdd:PRK09110    4 IIGYIV-VLGSVFGGYlLAGGHLGALIQPAE-LLIIGGAaLGAFIVGNPGKAIKATLKALPKLFKGPKYKKAdyMDLLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  82 FSEWADLARREGLLALEgkvAEIDDP--------------------FLKNGLSLAIDGQ-NADYIRDVLSEEVEAMEERH 140
Cdd:PRK09110   82 LYELLRKARQEGMMALE---AHIENPeespifakypkilkdhhlvdFICDYLRLMISGNmNPHEIEALMDEEIETHHHEA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 141 SAGAGMFTQAGTYAPTLGVLGAVVGLVAALKDMN-DIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLKRKSSNEVRQK 219
Cdd:PRK09110  159 EVPAHALQKVADALPAFGIVAAVLGVVKTMGSIDqPPAVLGALIGAALVGTFLGILLAYGFVGPLAARLEQVVEEDTKMY 238

                         250
                  ....*....|....*...
gi 1724454818 220 MLMIEGILSVLEGEAPRV 237
Cdd:PRK09110  239 QCIKVTLLASLNGYAPQI 256
PRK12482 PRK12482
flagellar motor stator protein MotA;
6-230 6.20e-08

flagellar motor stator protein MotA;


Pssm-ID: 171532 [Multi-domain]  Cd Length: 287  Bit Score: 52.44  E-value: 6.20e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818   6 IVGLIMGVVALIVGMYFKGVTPDALMNPAAIFIIILGTMATVTIAFPMSELKRLPKLFKILFTEQKLGKD--TDIIKLFS 83
Cdd:PRK12482    4 LFGLLVVMGCVFGGYLMSGGSLSSIWQPGEIIIILGAGIGAMILGNPKSVLKEMWHQIKGVIRRKEYGVEfqRQLLLLLY 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818  84 EWADLARREGLLALEGKVAE-------------IDDP----FLKNGLSLAIDGQ-NADYIRDVLSEEVEAMEERHSAGAG 145
Cdd:PRK12482   84 ELLEMVQEGGLKRLDQHIEIpeesslfqkypliLQQKrlitFISDNFRLMAMGKiNQHELEGILDQELDAVEEELLQPSR 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1724454818 146 MFTQAGTYAPTLGVLGAVVGLVAALKDMN-DIEKLGHAISAAFIATLLGIFTGYVLWHPFANKLkrksSNEVRQKMLMIE 224
Cdd:PRK12482  164 SLQRIAEAMPGFGICAAVLGIIITMQSIDgSIAEIGLKVAAALVGTFLGVFICYCLMDPLANAM----EQEIKKELSLLE 239


                  ....*.
gi 1724454818 225 GILSVL 230
Cdd:PRK12482  240 CVRTVL 245
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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