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Conserved domains on  [gi|1724813840|ref|WP_147335100|]
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WG repeat-containing protein, partial [Phocaeicola vulgatus]

Protein Classification

WG repeat-containing protein( domain architecture ID 10632905)

WG repeat-containing protein may form a beta solenoid structure

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 42-76 8.03e-08

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


:

Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 47.05  E-value: 8.03e-08
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1724813840  42 YGFMTEDGTVVIKYKYDEATPFKDGIAKIGKDGKY 76
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSEGLAAVKKNGKW 35
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 168-203 2.97e-06

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


:

Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 42.82  E-value: 2.97e-06
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1724813840 168 FGFIDSAGNIIVKPTYNFIGSFNNqGICWVNIGGKY 203
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSE-GLAAVKKNGKW 35
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 134-167 4.91e-04

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


:

Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 36.65  E-value: 4.91e-04
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1724813840 134 WGLIDKTGKEILKTDYEAMGDLNKKLIYVLKGKK 167
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSEGLAAVKKNGK 34
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 76-108 2.03e-03

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


:

Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 35.11  E-value: 2.03e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1724813840  76 YSLINEDGEIITKRKYTYIGEFYNGVCPVAEGG 108
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSEGLAAVKKNG 33
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 215-236 3.64e-03

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


:

Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 34.34  E-value: 3.64e-03
                          10        20
                  ....*....|....*....|..
gi 1724813840 215 FGLINENGREIIPAKYEDVGNF 236
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPF 22
 
Name Accession Description Interval E-value
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 42-76 8.03e-08

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 47.05  E-value: 8.03e-08
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1724813840  42 YGFMTEDGTVVIKYKYDEATPFKDGIAKIGKDGKY 76
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSEGLAAVKKNGKW 35
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 168-203 2.97e-06

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 42.82  E-value: 2.97e-06
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1724813840 168 FGFIDSAGNIIVKPTYNFIGSFNNqGICWVNIGGKY 203
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSE-GLAAVKKNGKW 35
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 134-167 4.91e-04

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 36.65  E-value: 4.91e-04
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1724813840 134 WGLIDKTGKEILKTDYEAMGDLNKKLIYVLKGKK 167
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSEGLAAVKKNGK 34
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 76-108 2.03e-03

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 35.11  E-value: 2.03e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1724813840  76 YSLINEDGEIITKRKYTYIGEFYNGVCPVAEGG 108
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSEGLAAVKKNG 33
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 215-236 3.64e-03

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 34.34  E-value: 3.64e-03
                          10        20
                  ....*....|....*....|..
gi 1724813840 215 FGLINENGREIIPAKYEDVGNF 236
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPF 22
 
Name Accession Description Interval E-value
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 42-76 8.03e-08

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 47.05  E-value: 8.03e-08
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1724813840  42 YGFMTEDGTVVIKYKYDEATPFKDGIAKIGKDGKY 76
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSEGLAAVKKNGKW 35
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 168-203 2.97e-06

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 42.82  E-value: 2.97e-06
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1724813840 168 FGFIDSAGNIIVKPTYNFIGSFNNqGICWVNIGGKY 203
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSE-GLAAVKKNGKW 35
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 134-167 4.91e-04

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 36.65  E-value: 4.91e-04
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1724813840 134 WGLIDKTGKEILKTDYEAMGDLNKKLIYVLKGKK 167
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSEGLAAVKKNGK 34
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 76-108 2.03e-03

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 35.11  E-value: 2.03e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1724813840  76 YSLINEDGEIITKRKYTYIGEFYNGVCPVAEGG 108
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPFSEGLAAVKKNG 33
WG_beta_rep pfam14903
WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the ...
 215-236 3.64e-03

WG containing repeat; This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).


Pssm-ID: 464361 [Multi-domain]  Cd Length: 35  Bit Score: 34.34  E-value: 3.64e-03
                          10        20
                  ....*....|....*....|..
gi 1724813840 215 FGLINENGREIIPAKYEDVGNF 236
Cdd:pfam14903   1 WGYIDKKGKIVIPPKYDEAGPF 22
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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