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Concise Results
Standard Results
Full Results
BCCT family transporter [Comamonas kerstersii]
Protein Classification
BCCT family transporter ( domain architecture ID 10003438 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Bacillus subtilis glycine betaine transporter OpuD
List of domain hits
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
9-512
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 657.22
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 9 TTAAR K PRMTFA P A V VL PS L L VLG A LLVLCGFY P QR A DQLFGS A QA W VV TNF D WFY TVA V TG F L VF LVLI A W S R YG D IRL 88
Cdd:COG1292 3 DKNKE K FKKKID P P V FI PS A L LIL A FVLWGLLF P EA A GAVLNA A FS W IT TNF G WFY LLL V LL F V VF CLYL A F S K YG K IRL 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 89 G P DDAKPEFS FA SW T AMLF A AGMGIGL MYF GV G EPL Q H Y L N PP TQ - E A G T P A AAR E A LTS TFFHWG FQ AWAIY GVM GL V L 167
Cdd:COG1292 83 G G DDAKPEFS TF SW F AMLF S AGMGIGL VFW GV A EPL Y H F L S PP PG v E P G S P E AAR W A MAY TFFHWG LH AWAIY ALV GL A L 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 168 AYF GF R YN LPLT MR S G LYPLL QK RI N GPIG HSV D AF A LVG T IA G L AT T LG Y GALQ LA AGLN LVT G WDTGT T A f R I AV I V V 247
Cdd:COG1292 163 AYF AY R RG LPLT IS S A LYPLL GD RI Y GPIG KVI D IL A VFA T VF G V AT S LG L GALQ IN AGLN YLF G IPNSL T V - Q I II I A V 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 248 VVG L AGL SA A SGLDKG V KRLS EV N LLITFA LL G FVL LC GPT V F L L QA F SENI G N YL SSL V G MSL R T FT Y E vak D D GW F GG 327
Cdd:COG1292 242 ITA L FTI SA V SGLDKG I KRLS NL N MVLALL LL L FVL IV GPT L F I L NL F VQSL G D YL QNF V P MSL W T DA Y G --- D T GW L GG 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 328 WT IL YWAWWI S W S PFVG M FIARISRGRT V REF IV GVL FI PT A F NL LW MT VFG NG AI WIDTHVAQGALS A T A SN V D A L LF R 407
Cdd:COG1292 319 WT VF YWAWWI A W A PFVG L FIARISRGRT I REF VL GVL LV PT L F TF LW FS VFG GT AI HLELNGGGDLAE A V A AG V E A A LF A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 408 FF E Y LPL AKAV S WI A VL L ITL FFVTSADSG AY V VDAIA S R G HPQS P V WQR L FW AAVL G MT A V VLLLAGGL K ALQ AMTLV T 487
Cdd:COG1292 399 LL E Q LPL GTIL S VL A II L VII FFVTSADSG SL V LAMLT S G G DEEP P R WQR I FW GVLI G LV A A VLLLAGGL S ALQ TASII T 478
490 500
....*....|....*....|....*
gi 1757329025 488 ALP VAAIMV L L C IG L WRGMKA D LAH 512
Cdd:COG1292 479 ALP FSFVLL L M C VS L VKALRE D PRR 503
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
9-512
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 657.22
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 9 TTAAR K PRMTFA P A V VL PS L L VLG A LLVLCGFY P QR A DQLFGS A QA W VV TNF D WFY TVA V TG F L VF LVLI A W S R YG D IRL 88
Cdd:COG1292 3 DKNKE K FKKKID P P V FI PS A L LIL A FVLWGLLF P EA A GAVLNA A FS W IT TNF G WFY LLL V LL F V VF CLYL A F S K YG K IRL 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 89 G P DDAKPEFS FA SW T AMLF A AGMGIGL MYF GV G EPL Q H Y L N PP TQ - E A G T P A AAR E A LTS TFFHWG FQ AWAIY GVM GL V L 167
Cdd:COG1292 83 G G DDAKPEFS TF SW F AMLF S AGMGIGL VFW GV A EPL Y H F L S PP PG v E P G S P E AAR W A MAY TFFHWG LH AWAIY ALV GL A L 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 168 AYF GF R YN LPLT MR S G LYPLL QK RI N GPIG HSV D AF A LVG T IA G L AT T LG Y GALQ LA AGLN LVT G WDTGT T A f R I AV I V V 247
Cdd:COG1292 163 AYF AY R RG LPLT IS S A LYPLL GD RI Y GPIG KVI D IL A VFA T VF G V AT S LG L GALQ IN AGLN YLF G IPNSL T V - Q I II I A V 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 248 VVG L AGL SA A SGLDKG V KRLS EV N LLITFA LL G FVL LC GPT V F L L QA F SENI G N YL SSL V G MSL R T FT Y E vak D D GW F GG 327
Cdd:COG1292 242 ITA L FTI SA V SGLDKG I KRLS NL N MVLALL LL L FVL IV GPT L F I L NL F VQSL G D YL QNF V P MSL W T DA Y G --- D T GW L GG 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 328 WT IL YWAWWI S W S PFVG M FIARISRGRT V REF IV GVL FI PT A F NL LW MT VFG NG AI WIDTHVAQGALS A T A SN V D A L LF R 407
Cdd:COG1292 319 WT VF YWAWWI A W A PFVG L FIARISRGRT I REF VL GVL LV PT L F TF LW FS VFG GT AI HLELNGGGDLAE A V A AG V E A A LF A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 408 FF E Y LPL AKAV S WI A VL L ITL FFVTSADSG AY V VDAIA S R G HPQS P V WQR L FW AAVL G MT A V VLLLAGGL K ALQ AMTLV T 487
Cdd:COG1292 399 LL E Q LPL GTIL S VL A II L VII FFVTSADSG SL V LAMLT S G G DEEP P R WQR I FW GVLI G LV A A VLLLAGGL S ALQ TASII T 478
490 500
....*....|....*....|....*
gi 1757329025 488 ALP VAAIMV L L C IG L WRGMKA D LAH 512
Cdd:COG1292 479 ALP FSFVLL L M C VS L VKALRE D PRR 503
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
40-509
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 596.06
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 40 FY P QRADQLFGS A QA W VVT NF D WFY TVA V TG FLVF LVLI A W SRYG D IRLG P DD A KPEFS FA SW T AMLFAAGMGIGL MYF G 119
Cdd:pfam02028 18 IF P EALSAVVNT A LD W ITD NF G WFY LLL V LI FLVF ALFL A F SRYG N IRLG G DD D KPEFS TF SW F AMLFAAGMGIGL VFW G 97
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 120 V G EPL Q HYL N - PP TQ E A GTP A AA RE A LTS TFFHWG FQ AWAIY GVMG L V LAYF GF R YN LPL TMR S G LYPLL QK RI N GPIG H 198
Cdd:pfam02028 98 V A EPL S HYL S p PP GG E P GTP E AA QQ A MAY TFFHWG LH AWAIY ALVA L A LAYF AY R KG LPL LIS S A LYPLL GD RI D GPIG K 177
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 199 SV D AF A LVG T IA G L AT T LG Y GALQ LA AGL NLVT G WDTGT T A f RI A V I VVVVG L AGL SA A SGLDKG V KRLS EV N LLITF AL 278
Cdd:pfam02028 178 AI D IL A IIA T VF G V AT S LG L GALQ IN AGL SYLF G IPNTL T T - QL A I I AIITA L FTI SA V SGLDKG I KRLS NL N MYLAV AL 256
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 279 L G FVL LC GPT V F L L QA F SENI G N YL SSL V G MS LR T FTYE va KDD GW F GGWTI L YWAWWI S W S PFVGMFIARISRGRT V RE 358
Cdd:pfam02028 257 L L FVL IA GPT L F I L NT F VQSL G D YL QNF V P MS FY T DPFG -- DTG GW L GGWTI F YWAWWI A W A PFVGMFIARISRGRT I RE 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 359 FI V GVL FI PT A F NL LW MT VFG NG AI WIDTHVAQGALS A TASNVD A L LF RFF E Y LPL AKAV S WI A V LLI TL FFVTSADSG A 438
Cdd:pfam02028 335 FI L GVL LV PT L F TF LW FS VFG GT AI YLELNGPGDLAD A VEAGPP A A LF ALL E Q LPL GTIL S VL A L LLI II FFVTSADSG T 414
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1757329025 439 Y V VDAIA S R G HPQS P V WQR L FW AAV LG MT A V VLLLAGGL K ALQ AMTLVT ALP VAA I MV L L CI G L WRGMKAD 509
Cdd:pfam02028 415 L V IAMLS S G G DLNP P R WQR V FW GVL LG AV A A VLLLAGGL E ALQ SASIIA ALP FSF I LL L M CI S L FKALREE 485
PRK09928
PRK09928 choline transport protein BetT; Provisional
40-684
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 558.93
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 40 FYPQRADQLFGSAQA WV VTN F D W F Y TV A V T GFL VF LVL IA W SR Y G D I R LGP DDA KPEFS FA SW T AMLFAAG M GI G LM Y F G 119
Cdd:PRK09928 36 LFTDFSNRWINRTLN WV SKT F G W Y Y LL A A T LYI VF VIF IA C SR F G S I K LGP EQS KPEFS LL SW A AMLFAAG I GI D LM F F S 115
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 120 V G EP LQH Y LN PP TQEAG T PA AAR E A LTS T F FH W G FQA W AI Y GV MG LV L A YF GF RYNLPLT M RS G LYP LLQ KRINGPIGHS 199
Cdd:PRK09928 116 V A EP VTQ Y MQ PP EGAGQ T IE AAR Q A MVW T L FH Y G LTG W SM Y AL MG MA L G YF SY RYNLPLT I RS A LYP IFG KRINGPIGHS 195
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 200 VD AF A LV GTI A G L ATTLG Y G AL QL AA GL NLVTGWDTGTT A f RI A V I VVV V GL A GL S AA SG LD KG VKR LSE V N L L ITFA L L 279
Cdd:PRK09928 196 VD IA A VI GTI F G I ATTLG I G VV QL NY GL SVLFDIPESLA A - QA A L I ALS V II A TI S VT SG VN KG IRV LSE L N V L LALG L I 274
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 280 G FVL LC G P T V FLL Q A FSE N I G N Y LSSLV GM S L RT F TYEVAKD dg W FGG WT ILY WAWW IS WSPFVG M F I ARISRGRT V R E F 359
Cdd:PRK09928 275 L FVL FM G D T S FLL N A LVL N V G D Y VNRFM GM T L NS F AFDRPTE -- W MNN WT LFF WAWW VA WSPFVG L F L ARISRGRT I R Q F 352
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 360 IV G V L F IP TA F N LLW MTV FGN G A IWIDT H VAQGALSATASNVDALLFRFFEYL P LAKAVSWI A VLLIT LF F VTSADSGA Y 439
Cdd:PRK09928 353 VL G T L I IP FT F T LLW LSI FGN S A LYEII H GNAAFAEEAMAHPERGFYSLLAQY P AFTFSASV A TITGL LF Y VTSADSGA L 432
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 440 V VDAIA S R --- GHPQS P V W Q R L FW AAVL G MTAVVL L LAG G LK ALQ AM T LVTA LP VAAIMVLLCI GL WRGM K AD --- L A H A 513
Cdd:PRK09928 433 V LGNFT S K lkd INSDA P N W L R V FW SVAI G LLTLGM L MTN G IS ALQ NT T VIMG LP FSFVIFFVMA GL YKSL K VE dyr R A S A 512
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 514 GQ D L AP ATSFWTGQ - H W RK RL EQIVRQ P TEADVN R F L KVSVL PAM Q EV VA E M R KQ G VDARVQ d DTAVT E GADA G SVR L I V 592
Cdd:PRK09928 513 NR D T AP RLVGLQDR l N W KQ RL SRVMNY P GTRYTR R M L DTVCR PAM E EV AQ E L R LR G AYVELN - ELPPE E DERL G HLD L L V 591
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 593 PITGLRD FVY GVR P VTRRL PGF MLTEVTDDEANV R RH vvepi TF FED G RE G Y D VQYLRQ E EL I A DIL RN YER Y L SLMADQ 672
Cdd:PRK09928 592 HLGDEQN FVY QIW P QRYSV PGF TYRARSGKSTYY R LE ----- TF LLE G SQ G N D LMDYSK E QV I N DIL DQ YER H L NFLHLH 666
650
....*....|..
gi 1757329025 673 R tvlln R APG HT 684
Cdd:PRK09928 667 R ----- E APG NS 673
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
62-509
3.70e-167
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 486.86
E-value: 3.70e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 62 W F Y TVA VT G FL V F LVL IA W SRYG D IRLG P DD A KPEFS FA SW T AMLFAAGMG I GLM YF GV G EPL QH YL N PP TQEAG T P - A A 140
Cdd:TIGR00842 2 W A Y ILT VT L FL G F VLY IA F SRYG K IRLG R DD E KPEFS TL SW L AMLFAAGMG A GLM FW GV A EPL TY YL T PP FGAGP T S t T A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 141 ARE AL TS T F FHWG FQA WAIY GVM GL V LAYF G FR YN LPL TMR S G L Y PLL QKRI NGPIG HSV D AF ALV G T IA G L AT T LG Y GA 220
Cdd:TIGR00842 82 QEQ AL AY T L FHWG IHP WAIY ALV GL A LAYF H FR KG LPL RLS S A L V PLL GEKV NGPIG KAI D IL ALV A T VF G V AT S LG L GA 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 221 L Q LA AGL NLV t GWDTGTTAFRIAV I VV V VG LA GL S A ASG LD KG V K R LS EV N LLIT F A LL G FVL LC GPTVFLL QA F SEN IG 300
Cdd:TIGR00842 162 P Q IN AGL SAL - FGIPDSFWLQALI I LC V TA LA CI S V ASG VG KG I K I LS NI N MALA F L LL L FVL IV GPTVFLL NS F VDS IG 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 301 NYL SSLVG MS L RT FTYE va KDD GW F GGWT IL YWAWWISWSPFVGMFIARISRGRT V REFI V GVL FI PTAF NL LW MT VFGN 380
Cdd:TIGR00842 241 NYL QNFPQ MS F RT DPDD -- GKG GW P GGWT VF YWAWWISWSPFVGMFIARISRGRT I REFI F GVL LG PTAF TW LW FS VFGN 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 381 G A IWIDTHVAQGAL - SATAS N VDAL LF RFFEY LPL AKAVSWI A VL LI TL FF V TSADS GAY V VDAIA SRG --- HPQS P V W Q 456
Cdd:TIGR00842 319 S A LLLQQNGGFING p FVVET N GARA LF GLLAA LPL GTITMAL A LI LI II FF I TSADS ASL V LANTT SRG gql GEEP P K W V 398
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1757329025 457 R L FWA AVL G - MTA V V L LLA G G L K ALQ AM T LVT ALP VAAI M VLLCIG L WRGM K A D 509
Cdd:TIGR00842 399 R V FWA VAI G l IAL V L L FSG G S L A ALQ TT T IIA ALP FSFV M LVVMFS L IKDL K Q D 452
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
9-512
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 657.22
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 9 TTAAR K PRMTFA P A V VL PS L L VLG A LLVLCGFY P QR A DQLFGS A QA W VV TNF D WFY TVA V TG F L VF LVLI A W S R YG D IRL 88
Cdd:COG1292 3 DKNKE K FKKKID P P V FI PS A L LIL A FVLWGLLF P EA A GAVLNA A FS W IT TNF G WFY LLL V LL F V VF CLYL A F S K YG K IRL 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 89 G P DDAKPEFS FA SW T AMLF A AGMGIGL MYF GV G EPL Q H Y L N PP TQ - E A G T P A AAR E A LTS TFFHWG FQ AWAIY GVM GL V L 167
Cdd:COG1292 83 G G DDAKPEFS TF SW F AMLF S AGMGIGL VFW GV A EPL Y H F L S PP PG v E P G S P E AAR W A MAY TFFHWG LH AWAIY ALV GL A L 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 168 AYF GF R YN LPLT MR S G LYPLL QK RI N GPIG HSV D AF A LVG T IA G L AT T LG Y GALQ LA AGLN LVT G WDTGT T A f R I AV I V V 247
Cdd:COG1292 163 AYF AY R RG LPLT IS S A LYPLL GD RI Y GPIG KVI D IL A VFA T VF G V AT S LG L GALQ IN AGLN YLF G IPNSL T V - Q I II I A V 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 248 VVG L AGL SA A SGLDKG V KRLS EV N LLITFA LL G FVL LC GPT V F L L QA F SENI G N YL SSL V G MSL R T FT Y E vak D D GW F GG 327
Cdd:COG1292 242 ITA L FTI SA V SGLDKG I KRLS NL N MVLALL LL L FVL IV GPT L F I L NL F VQSL G D YL QNF V P MSL W T DA Y G --- D T GW L GG 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 328 WT IL YWAWWI S W S PFVG M FIARISRGRT V REF IV GVL FI PT A F NL LW MT VFG NG AI WIDTHVAQGALS A T A SN V D A L LF R 407
Cdd:COG1292 319 WT VF YWAWWI A W A PFVG L FIARISRGRT I REF VL GVL LV PT L F TF LW FS VFG GT AI HLELNGGGDLAE A V A AG V E A A LF A 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 408 FF E Y LPL AKAV S WI A VL L ITL FFVTSADSG AY V VDAIA S R G HPQS P V WQR L FW AAVL G MT A V VLLLAGGL K ALQ AMTLV T 487
Cdd:COG1292 399 LL E Q LPL GTIL S VL A II L VII FFVTSADSG SL V LAMLT S G G DEEP P R WQR I FW GVLI G LV A A VLLLAGGL S ALQ TASII T 478
490 500
....*....|....*....|....*
gi 1757329025 488 ALP VAAIMV L L C IG L WRGMKA D LAH 512
Cdd:COG1292 479 ALP FSFVLL L M C VS L VKALRE D PRR 503
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
40-509
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 596.06
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 40 FY P QRADQLFGS A QA W VVT NF D WFY TVA V TG FLVF LVLI A W SRYG D IRLG P DD A KPEFS FA SW T AMLFAAGMGIGL MYF G 119
Cdd:pfam02028 18 IF P EALSAVVNT A LD W ITD NF G WFY LLL V LI FLVF ALFL A F SRYG N IRLG G DD D KPEFS TF SW F AMLFAAGMGIGL VFW G 97
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 120 V G EPL Q HYL N - PP TQ E A GTP A AA RE A LTS TFFHWG FQ AWAIY GVMG L V LAYF GF R YN LPL TMR S G LYPLL QK RI N GPIG H 198
Cdd:pfam02028 98 V A EPL S HYL S p PP GG E P GTP E AA QQ A MAY TFFHWG LH AWAIY ALVA L A LAYF AY R KG LPL LIS S A LYPLL GD RI D GPIG K 177
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 199 SV D AF A LVG T IA G L AT T LG Y GALQ LA AGL NLVT G WDTGT T A f RI A V I VVVVG L AGL SA A SGLDKG V KRLS EV N LLITF AL 278
Cdd:pfam02028 178 AI D IL A IIA T VF G V AT S LG L GALQ IN AGL SYLF G IPNTL T T - QL A I I AIITA L FTI SA V SGLDKG I KRLS NL N MYLAV AL 256
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 279 L G FVL LC GPT V F L L QA F SENI G N YL SSL V G MS LR T FTYE va KDD GW F GGWTI L YWAWWI S W S PFVGMFIARISRGRT V RE 358
Cdd:pfam02028 257 L L FVL IA GPT L F I L NT F VQSL G D YL QNF V P MS FY T DPFG -- DTG GW L GGWTI F YWAWWI A W A PFVGMFIARISRGRT I RE 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 359 FI V GVL FI PT A F NL LW MT VFG NG AI WIDTHVAQGALS A TASNVD A L LF RFF E Y LPL AKAV S WI A V LLI TL FFVTSADSG A 438
Cdd:pfam02028 335 FI L GVL LV PT L F TF LW FS VFG GT AI YLELNGPGDLAD A VEAGPP A A LF ALL E Q LPL GTIL S VL A L LLI II FFVTSADSG T 414
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1757329025 439 Y V VDAIA S R G HPQS P V WQR L FW AAV LG MT A V VLLLAGGL K ALQ AMTLVT ALP VAA I MV L L CI G L WRGMKAD 509
Cdd:pfam02028 415 L V IAMLS S G G DLNP P R WQR V FW GVL LG AV A A VLLLAGGL E ALQ SASIIA ALP FSF I LL L M CI S L FKALREE 485
PRK09928
PRK09928 choline transport protein BetT; Provisional
40-684
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 558.93
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 40 FYPQRADQLFGSAQA WV VTN F D W F Y TV A V T GFL VF LVL IA W SR Y G D I R LGP DDA KPEFS FA SW T AMLFAAG M GI G LM Y F G 119
Cdd:PRK09928 36 LFTDFSNRWINRTLN WV SKT F G W Y Y LL A A T LYI VF VIF IA C SR F G S I K LGP EQS KPEFS LL SW A AMLFAAG I GI D LM F F S 115
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 120 V G EP LQH Y LN PP TQEAG T PA AAR E A LTS T F FH W G FQA W AI Y GV MG LV L A YF GF RYNLPLT M RS G LYP LLQ KRINGPIGHS 199
Cdd:PRK09928 116 V A EP VTQ Y MQ PP EGAGQ T IE AAR Q A MVW T L FH Y G LTG W SM Y AL MG MA L G YF SY RYNLPLT I RS A LYP IFG KRINGPIGHS 195
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 200 VD AF A LV GTI A G L ATTLG Y G AL QL AA GL NLVTGWDTGTT A f RI A V I VVV V GL A GL S AA SG LD KG VKR LSE V N L L ITFA L L 279
Cdd:PRK09928 196 VD IA A VI GTI F G I ATTLG I G VV QL NY GL SVLFDIPESLA A - QA A L I ALS V II A TI S VT SG VN KG IRV LSE L N V L LALG L I 274
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 280 G FVL LC G P T V FLL Q A FSE N I G N Y LSSLV GM S L RT F TYEVAKD dg W FGG WT ILY WAWW IS WSPFVG M F I ARISRGRT V R E F 359
Cdd:PRK09928 275 L FVL FM G D T S FLL N A LVL N V G D Y VNRFM GM T L NS F AFDRPTE -- W MNN WT LFF WAWW VA WSPFVG L F L ARISRGRT I R Q F 352
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 360 IV G V L F IP TA F N LLW MTV FGN G A IWIDT H VAQGALSATASNVDALLFRFFEYL P LAKAVSWI A VLLIT LF F VTSADSGA Y 439
Cdd:PRK09928 353 VL G T L I IP FT F T LLW LSI FGN S A LYEII H GNAAFAEEAMAHPERGFYSLLAQY P AFTFSASV A TITGL LF Y VTSADSGA L 432
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 440 V VDAIA S R --- GHPQS P V W Q R L FW AAVL G MTAVVL L LAG G LK ALQ AM T LVTA LP VAAIMVLLCI GL WRGM K AD --- L A H A 513
Cdd:PRK09928 433 V LGNFT S K lkd INSDA P N W L R V FW SVAI G LLTLGM L MTN G IS ALQ NT T VIMG LP FSFVIFFVMA GL YKSL K VE dyr R A S A 512
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 514 GQ D L AP ATSFWTGQ - H W RK RL EQIVRQ P TEADVN R F L KVSVL PAM Q EV VA E M R KQ G VDARVQ d DTAVT E GADA G SVR L I V 592
Cdd:PRK09928 513 NR D T AP RLVGLQDR l N W KQ RL SRVMNY P GTRYTR R M L DTVCR PAM E EV AQ E L R LR G AYVELN - ELPPE E DERL G HLD L L V 591
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 593 PITGLRD FVY GVR P VTRRL PGF MLTEVTDDEANV R RH vvepi TF FED G RE G Y D VQYLRQ E EL I A DIL RN YER Y L SLMADQ 672
Cdd:PRK09928 592 HLGDEQN FVY QIW P QRYSV PGF TYRARSGKSTYY R LE ----- TF LLE G SQ G N D LMDYSK E QV I N DIL DQ YER H L NFLHLH 666
650
....*....|..
gi 1757329025 673 R tvlln R APG HT 684
Cdd:PRK09928 667 R ----- E APG NS 673
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
62-509
3.70e-167
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 486.86
E-value: 3.70e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 62 W F Y TVA VT G FL V F LVL IA W SRYG D IRLG P DD A KPEFS FA SW T AMLFAAGMG I GLM YF GV G EPL QH YL N PP TQEAG T P - A A 140
Cdd:TIGR00842 2 W A Y ILT VT L FL G F VLY IA F SRYG K IRLG R DD E KPEFS TL SW L AMLFAAGMG A GLM FW GV A EPL TY YL T PP FGAGP T S t T A 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 141 ARE AL TS T F FHWG FQA WAIY GVM GL V LAYF G FR YN LPL TMR S G L Y PLL QKRI NGPIG HSV D AF ALV G T IA G L AT T LG Y GA 220
Cdd:TIGR00842 82 QEQ AL AY T L FHWG IHP WAIY ALV GL A LAYF H FR KG LPL RLS S A L V PLL GEKV NGPIG KAI D IL ALV A T VF G V AT S LG L GA 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 221 L Q LA AGL NLV t GWDTGTTAFRIAV I VV V VG LA GL S A ASG LD KG V K R LS EV N LLIT F A LL G FVL LC GPTVFLL QA F SEN IG 300
Cdd:TIGR00842 162 P Q IN AGL SAL - FGIPDSFWLQALI I LC V TA LA CI S V ASG VG KG I K I LS NI N MALA F L LL L FVL IV GPTVFLL NS F VDS IG 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 301 NYL SSLVG MS L RT FTYE va KDD GW F GGWT IL YWAWWISWSPFVGMFIARISRGRT V REFI V GVL FI PTAF NL LW MT VFGN 380
Cdd:TIGR00842 241 NYL QNFPQ MS F RT DPDD -- GKG GW P GGWT VF YWAWWISWSPFVGMFIARISRGRT I REFI F GVL LG PTAF TW LW FS VFGN 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 381 G A IWIDTHVAQGAL - SATAS N VDAL LF RFFEY LPL AKAVSWI A VL LI TL FF V TSADS GAY V VDAIA SRG --- HPQS P V W Q 456
Cdd:TIGR00842 319 S A LLLQQNGGFING p FVVET N GARA LF GLLAA LPL GTITMAL A LI LI II FF I TSADS ASL V LANTT SRG gql GEEP P K W V 398
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1757329025 457 R L FWA AVL G - MTA V V L LLA G G L K ALQ AM T LVT ALP VAAI M VLLCIG L WRGM K A D 509
Cdd:TIGR00842 399 R V FWA VAI G l IAL V L L FSG G S L A ALQ TT T IIA ALP FSFV M LVVMFS L IKDL K Q D 452
PRK09950
PRK09950 putative transporter; Provisional
40-512
1.56e-62
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 216.58
E-value: 1.56e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 40 FY PQ RADQLFGSAQA WV VTN F DWFYTVA V TGFLVFLVLI A W S R YG D IRLG pd DA KPE F S FA SW TA M LFA AG M G IGLM Y F G 119
Cdd:PRK09950 29 LF PQ QSAAAANTIFQ WV TRT F GSPVQLF V LLAMILVLYL A T S K YG N IRLG -- EG KPE Y S TL SW LF M FIC AG L G SSTL Y W G 106
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 120 V G E PLQH Y LN P PTQE A G - T P A A AREALTST FFHWG FQ AWA I Y GVMG L VL AY - F GF R Y N LP L TMRSGLYPLLQKRIN GP I G 197
Cdd:PRK09950 107 V M E WAYY Y QT P GLNI A P r S P K A LEYSVSYS FFHWG IS AWA T Y ALAS L IM AY h F HV R K N KG L SLSGIIAAITGVKPQ GP W G 186
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 198 HS VD AFA L VG T IAG L ATT L GYG A LQLAA GL NLV TG WDT g TTAFRIA VI VVVVGLAG LS AAS G L D K G VK RLS EVNLLIT F A 277
Cdd:PRK09950 187 RL VD LMF L IA T VGA L TIS L VVT A ATFTR GL SAL TG LPN - NFTVQAF VI LLSGVIFC LS SYI G I D N G LQ RLS KMVGWGA F L 265
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 278 LLGF VL LC GPT V F LLQAFSEN IG NYLSSLVG MSL R T ftye VAKD DG W F G - G WT IL YW A WWIS WS P F V G MF IA R I SRGR TV 356
Cdd:PRK09950 266 FALL VL IV GPT E F ITNNIINS IG LTTQNFLQ MSL F T ---- DPMG DG S F T r N WT VF YW L WWIS YT P G V A MF VT R V SRGR KI 341
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 357 R E F I V G VLFIPTAFNLLWMT V FGNG AI -- W I DTHVAQGALSA T ASN v DALLFRFFEY LP LA K AVSWIAVLLITL F FVTSA 434
Cdd:PRK09950 342 K E V I W G LILGSSVGCWFFFG V LESY AI hq F I NGVINVPQILN T LGG - ETAVQQLLSS LP AG K LFLAAYLGIMII F LASHM 420
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 435 D SG AY VVD A IAS R G -- HPQS P VWQ - RLFW AA V LGMTAV - V L LLAGG L KALQAMTLV TALP VAA I MVLLCI G LW R GM K A D L 510
Cdd:PRK09950 421 D AV AY TMA A TST R N lr EGDD P DRG l RLFW CV V ITLIPL s I L FTGAS L DTMKTTVVL TALP FLV I LLIKVY G FI R WL K Q D Y 500
..
gi 1757329025 511 A H 512
Cdd:PRK09950 501 A D 502
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
41-507
2.03e-59
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 208.05
E-value: 2.03e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 41 YPQR A DQLFGSAQAW V VTNFD W FYTVAVTGF L VFLVLIAWSR Y GDI RLG pd D A KPEFS F ASW TA M L FA AGMGIGLMYF G V 120
Cdd:PRK03356 32 DLDA A NVVINAVFSY V TNVWG W AFEWYMVVM L FGWFWLVFGP Y AKK RLG -- D E KPEFS T ASW IF M M FA SCTSAAVLFW G S 109
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 121 G E PLQHYLN PP TQ - E AGTPA A AREA L TSTF FHWG FQA WA I Y GVMGLVLA YF G F RYNLPLTMR S G - L Y PL L - Q K RIN G PI G 197
Cdd:PRK03356 110 I E IYYYIST PP FG l E PNSTG A KELG L AYSL FHWG PLP WA T Y SFLSVAFG YF F F VRKMDVIRP S S t L V PL V g E K HAK G LF G 189
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 198 HS VD A F A LV GT I AGLA T T LG YGALQLAAGLNLVT G WDT g T TAFRIAV I VVVVG L AGLSA A S GL D KGV KRL S E V NLLIT F A 277
Cdd:PRK03356 190 TI VD N F Y LV AL I FAMG T S LG LATPLVTECMQWLF G IPH - T LQLDAII I TCWII L NAICV A C GL Q KGV RIA S D V RSYLS F L 268
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 278 L LG F V LLC G P T V F LLQA F SENI G NY L SS L VG M SLR T FTY eva KDD G WFG GWT IL YWAWW ISWSPFVGM F I ARISRGRTVR 357
Cdd:PRK03356 269 M LG W V FIV G G T S F IMNY F TDSV G ML L MY L PR M LFY T DPI --- GKG G FPQ GWT VF YWAWW VIYAIQMSI F L ARISRGRTVR 345
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1757329025 358 E FIV G VLFIP TA FNLLWM TV F G NGAIW - I D THVAQGALSATASN V DALLFRFFEY LPL AK A VS W IAVL L ITLFF VT SADS 436
Cdd:PRK03356 346 E LCF G MVLGL TA STWILW TV L G SNTLL l M D KNIINIPNLIEQYG V ARAIIETWAA LPL ST A TM W GFFI L CFIAT VT LINA 425
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1757329025 437 GA Y VVDAIAS R G --- HPQS P VWQ R LF W AAVL G MTAV VLL LA GGLK AL Q AMTLVTAL P VAAIMVLLCIGLWRGM K 507
Cdd:PRK03356 426 CS Y TLAMSTC R E vrd GEEP P LLV R IG W SILV G IIGI VLL AL GGLK PI Q TAIIAGGC P LFFVNIMVTLSFIKDA K 499
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
