NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1798378092|ref|WP_159592627|]
View 

acyltransferase family protein [Hydrogenophaga sp. BPS33]

Protein Classification

acyltransferase family protein( domain architecture ID 229463)

acyltransferase family protein similar to Curvularia lunata acyltransferase clz18, part of the gene cluster that mediates the biosynthesis of squalestatin S1 (SQS1, also known as zaragozic acid A), a heavily oxidized fungal polyketide that offers potent cholesterol lowering activity by targeting squalene synthase (SS)

EC:  2.3.1.-
Gene Ontology:  GO:0016747

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Acyl_transf_3 super family cl21495
Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain ...
6-367 7.25e-13

Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain is found in a wide range of acyltransferase enzymes, including, mainly, bacterial proteins which catalyze the transfer of acyl groups, other than amino-acyl, from one compound to another, such as Glucans biosynthesis protein C (OPGC) or protein OatA from Listeria monocytogenes serovar 1/2a and Staphylococcus aureus, an integral membrane protein which is responsible for O-acetylation at the C6-hydroxyl group of N-acetylmuramyl residues, forming the corresponding N,6-O-diacetylmuramic acid of the peptidoglycan, a modification that determines lysozyme resistance. This domain is also present in eukaryotic proteins, namely O-acyltransferase like protein (OACYL) from mouse and RHY1 (Regulator of hypoxia-inducible factor 1) and NRF6 (Nose resistant to fluoxetine protein 6) from Caenorhabditis elegans.


The actual alignment was detected with superfamily member PRK03854:

Pssm-ID: 473885  Cd Length: 375  Bit Score: 69.28  E-value: 7.25e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092   6 TPGQSGRTGFIDRLRVVLAALVIAHHAAITYGGAgSWFYREVTDagrpgSLLLTLFCAVNQSFFMGMFFLLAGYFTPGSL 85
Cdd:PRK03854    2 NPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSH-TWHVNSAEP-----SLWLTLLNDFIHAFRMQVFFVISGYFSYMLF 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  86 QRKGLRRFLLDRGVRLGVPLLVFGFVLGPMAVALGCIPKGQSVftPWGDWLGSGAF------VLGPLWFAWALLLFTLAW 159
Cdd:PRK03854   76 LRYPPKRWLKVRLERVGIPMLTAIPLLTLPQFIMLQYVKGKAE--DWPTLSLYEKYntlaweLISHLWFLLVLVVLTLLC 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 160 ILWSRASPRTAWPRSGTQASMPSGPNWLLSAVLVGLA-ALGIRQWIPVGQNVLGLQLGYFA-----SYVFLFFLGCRASA 233
Cdd:PRK03854  154 VAIFKRLRRNLENSDPRPATFGSLGKLSLIFLLLGLGyAAIRRTIFIVYPPILSSGLFNFIvmqtlFYLPFFLLGALAFI 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 234 GRWLERVSLERARDWGLASLVAIPLLPL---GAVLSGAMdgkavdfNGGLSAAAVLYALWepfvawgIMAVLLVQFRLRF 310
Cdd:PRK03854  234 FPALKALFTTPSRGCTLGAALAFVAYLLnqrYGSGDAWM-------YETESVITMVMGLW-------MVNVVFSLGHRLL 299
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1798378092 311 NVPSQRWKRWGEEAYGAFFIHAPVVVALSVLIAPWPLPSLLKFLLVSVFGTALSFLL 367
Cdd:PRK03854  300 NFPSPRVTYLVNASLFIYLVHHPLTLFFGALITPHISSNWLGFLLGLVFVFGIAFAL 356
 
Name Accession Description Interval E-value
opgC PRK03854
glucans biosynthesis protein MdoC;
6-367 7.25e-13

glucans biosynthesis protein MdoC;


Pssm-ID: 235167  Cd Length: 375  Bit Score: 69.28  E-value: 7.25e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092   6 TPGQSGRTGFIDRLRVVLAALVIAHHAAITYGGAgSWFYREVTDagrpgSLLLTLFCAVNQSFFMGMFFLLAGYFTPGSL 85
Cdd:PRK03854    2 NPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSH-TWHVNSAEP-----SLWLTLLNDFIHAFRMQVFFVISGYFSYMLF 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  86 QRKGLRRFLLDRGVRLGVPLLVFGFVLGPMAVALGCIPKGQSVftPWGDWLGSGAF------VLGPLWFAWALLLFTLAW 159
Cdd:PRK03854   76 LRYPPKRWLKVRLERVGIPMLTAIPLLTLPQFIMLQYVKGKAE--DWPTLSLYEKYntlaweLISHLWFLLVLVVLTLLC 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 160 ILWSRASPRTAWPRSGTQASMPSGPNWLLSAVLVGLA-ALGIRQWIPVGQNVLGLQLGYFA-----SYVFLFFLGCRASA 233
Cdd:PRK03854  154 VAIFKRLRRNLENSDPRPATFGSLGKLSLIFLLLGLGyAAIRRTIFIVYPPILSSGLFNFIvmqtlFYLPFFLLGALAFI 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 234 GRWLERVSLERARDWGLASLVAIPLLPL---GAVLSGAMdgkavdfNGGLSAAAVLYALWepfvawgIMAVLLVQFRLRF 310
Cdd:PRK03854  234 FPALKALFTTPSRGCTLGAALAFVAYLLnqrYGSGDAWM-------YETESVITMVMGLW-------MVNVVFSLGHRLL 299
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1798378092 311 NVPSQRWKRWGEEAYGAFFIHAPVVVALSVLIAPWPLPSLLKFLLVSVFGTALSFLL 367
Cdd:PRK03854  300 NFPSPRVTYLVNASLFIYLVHHPLTLFFGALITPHISSNWLGFLLGLVFVFGIAFAL 356
Acyl_transf_3 pfam01757
Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain ...
15-369 1.33e-10

Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain is found in a wide range of acyltransferase enzymes, including, mainly, bacterial proteins which catalyze the transfer of acyl groups, other than amino-acyl, from one compound to another, such as Glucans biosynthesis protein C (OPGC) or protein OatA from Listeria monocytogenes serovar 1/2a and Staphylococcus aureus, an integral membrane protein which is responsible for O-acetylation at the C6-hydroxyl group of N-acetylmuramyl residues, forming the corresponding N,6-O-diacetylmuramic acid of the peptidoglycan, a modification that determines lysozyme resistance. This domain is also present in eukaryotic proteins, namely O-acyltransferase like protein (OACYL) from mouse and RHY1 (Regulator of hypoxia-inducible factor 1) and NRF6 (Nose resistant to fluoxetine protein 6) from Caenorhabditis elegans.


Pssm-ID: 426413 [Multi-domain]  Cd Length: 330  Bit Score: 61.80  E-value: 1.33e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  15 FIDRLRVVLAALVIAHHAAITYGgagswfyrevTDAGRPGSLLLTLFCAVNQSFFMGMFFLLAGYFTPGSL-QRKGLRRF 93
Cdd:pfam01757   3 YLDLLRGIAILLVVIGHVLLAFG----------YGGFGLPLELALLFLVFLGRFGVPLFFFISGYLLAALRrRRRSLFKF 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  94 LLDRGVRLGVPLLVFGFVLGPMAVALGCIPKGQSVFTPWGDWLGSGAF--VLGPLWFAWALLLFTLAWILWSRASPRTAW 171
Cdd:pfam01757  73 IKKRLLRLLIPYLLWSLLYALLLLLVAGLSVGGALLLLLLLNNGPLFFlgVNGHLWFLSALFVFYLLLPLLLRLLRKLKK 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 172 PrsgtqasmpsgpnWLLSAVLVGLAALGIRQWIPVGQNVLGLQLGYFASYVFLFFLGcrASAGRWLERVSLERARDWGLA 251
Cdd:pfam01757 153 S-------------LLLLLLLLLLLLFLLYILILLVGVPFTVLVLFIFLYLPFFLLG--ALLARYRKRIRSKRLKLLIII 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 252 SlvaipllpLGAVLSGAMDGKAVDFNGGLSAAAVLYALWEPFVAWGIMAVLLVQFRLRFNVPSQRWKRW-GEEAYGAFFI 330
Cdd:pfam01757 218 L--------LALALLALILLLLFLFGLDPLALEFYGYPSLLLLLLGILLLLLLALLLANLRSLRRLLSYlGKYSFGIYLI 289
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1798378092 331 HAPVVVALSVLIAPW--PLPSLLKFLLVSVFGTALSFLLAR 369
Cdd:pfam01757 290 HPPILLLLGKLLGLLglPLLPILLFLLLLVLTLLVSVLLAR 330
WecH COG3274
Surface polysaccharide O-acyltransferase WecH [Cell wall/membrane/envelope biogenesis];
10-381 9.49e-09

Surface polysaccharide O-acyltransferase WecH [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442505 [Multi-domain]  Cd Length: 345  Bit Score: 56.54  E-value: 9.49e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  10 SGRTGFIDRLRVVLAALVIAHHAAITYggagswfyreVTDAGRPGSLLLTLFCAVNQSFFMG--MFFLLAGYFTPGSLQR 87
Cdd:COG3274     6 KKRIVYLDLLRVLAIFAVVLIHVTAPF----------VSSPGLIGSLNWWVANLLDSLSRFAvpLFFMISGALLLDRKKE 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  88 kGLRRFLLDRGVRLGVPLLVFGFVLGPMAVALGCIPKGQSVFTPWGDWLGSGAFvlgPLWFAWALLLFTLAW----ILWS 163
Cdd:COG3274    76 -DLKDFYKKRLRRILIPLLFWSLIYLLFFTFLGGFSFNSLSEFLKNLLTGGVSY---HLWFLYMIIGLYLFTpllrKLVR 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 164 RASPRTAWPrsgtqasmpsgpnWLLSAVLVGLAALGIRQWIPVGqnvLGLQLGYFASYVFLFFLGCRASAGRWLervsLE 243
Cdd:COG3274   152 KASKRELLY-------------FLLLWLILSLLLPYLNTLLGID---LFFTLTLFLGYLGYFLLGYYLARYKAR----LK 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 244 RARDWGLAS-LVAIPLLPLGAVLSGAMDGKAVDFngglsaaavLYALWEPFVAwgIMAVLLVQFRLRFNVPSQRWKRW-- 320
Cdd:COG3274   212 KRRLIALLLfLVGLALTFLGTYLLSLQTGKFNEL---------FYSYLSPNVV--LMSVALFLLLKNLSFRSSKLSRLls 280
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1798378092 321 --GEEAYGAFFIHAPVVVAL-SVLIAPWPLPSLLKFLLVSVFGTALSFLLARTLRALPGVTRVL 381
Cdd:COG3274   281 rlSKYSFGIYLIHPLVLDLLtKLGLNLLNINPLLGIPLVALLTFVLSLLIVLLLRKIPLLRKLV 344
 
Name Accession Description Interval E-value
opgC PRK03854
glucans biosynthesis protein MdoC;
6-367 7.25e-13

glucans biosynthesis protein MdoC;


Pssm-ID: 235167  Cd Length: 375  Bit Score: 69.28  E-value: 7.25e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092   6 TPGQSGRTGFIDRLRVVLAALVIAHHAAITYGGAgSWFYREVTDagrpgSLLLTLFCAVNQSFFMGMFFLLAGYFTPGSL 85
Cdd:PRK03854    2 NPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSH-TWHVNSAEP-----SLWLTLLNDFIHAFRMQVFFVISGYFSYMLF 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  86 QRKGLRRFLLDRGVRLGVPLLVFGFVLGPMAVALGCIPKGQSVftPWGDWLGSGAF------VLGPLWFAWALLLFTLAW 159
Cdd:PRK03854   76 LRYPPKRWLKVRLERVGIPMLTAIPLLTLPQFIMLQYVKGKAE--DWPTLSLYEKYntlaweLISHLWFLLVLVVLTLLC 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 160 ILWSRASPRTAWPRSGTQASMPSGPNWLLSAVLVGLA-ALGIRQWIPVGQNVLGLQLGYFA-----SYVFLFFLGCRASA 233
Cdd:PRK03854  154 VAIFKRLRRNLENSDPRPATFGSLGKLSLIFLLLGLGyAAIRRTIFIVYPPILSSGLFNFIvmqtlFYLPFFLLGALAFI 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 234 GRWLERVSLERARDWGLASLVAIPLLPL---GAVLSGAMdgkavdfNGGLSAAAVLYALWepfvawgIMAVLLVQFRLRF 310
Cdd:PRK03854  234 FPALKALFTTPSRGCTLGAALAFVAYLLnqrYGSGDAWM-------YETESVITMVMGLW-------MVNVVFSLGHRLL 299
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1798378092 311 NVPSQRWKRWGEEAYGAFFIHAPVVVALSVLIAPWPLPSLLKFLLVSVFGTALSFLL 367
Cdd:PRK03854  300 NFPSPRVTYLVNASLFIYLVHHPLTLFFGALITPHISSNWLGFLLGLVFVFGIAFAL 356
Acyl_transf_3 pfam01757
Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain ...
15-369 1.33e-10

Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain is found in a wide range of acyltransferase enzymes, including, mainly, bacterial proteins which catalyze the transfer of acyl groups, other than amino-acyl, from one compound to another, such as Glucans biosynthesis protein C (OPGC) or protein OatA from Listeria monocytogenes serovar 1/2a and Staphylococcus aureus, an integral membrane protein which is responsible for O-acetylation at the C6-hydroxyl group of N-acetylmuramyl residues, forming the corresponding N,6-O-diacetylmuramic acid of the peptidoglycan, a modification that determines lysozyme resistance. This domain is also present in eukaryotic proteins, namely O-acyltransferase like protein (OACYL) from mouse and RHY1 (Regulator of hypoxia-inducible factor 1) and NRF6 (Nose resistant to fluoxetine protein 6) from Caenorhabditis elegans.


Pssm-ID: 426413 [Multi-domain]  Cd Length: 330  Bit Score: 61.80  E-value: 1.33e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  15 FIDRLRVVLAALVIAHHAAITYGgagswfyrevTDAGRPGSLLLTLFCAVNQSFFMGMFFLLAGYFTPGSL-QRKGLRRF 93
Cdd:pfam01757   3 YLDLLRGIAILLVVIGHVLLAFG----------YGGFGLPLELALLFLVFLGRFGVPLFFFISGYLLAALRrRRRSLFKF 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  94 LLDRGVRLGVPLLVFGFVLGPMAVALGCIPKGQSVFTPWGDWLGSGAF--VLGPLWFAWALLLFTLAWILWSRASPRTAW 171
Cdd:pfam01757  73 IKKRLLRLLIPYLLWSLLYALLLLLVAGLSVGGALLLLLLLNNGPLFFlgVNGHLWFLSALFVFYLLLPLLLRLLRKLKK 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 172 PrsgtqasmpsgpnWLLSAVLVGLAALGIRQWIPVGQNVLGLQLGYFASYVFLFFLGcrASAGRWLERVSLERARDWGLA 251
Cdd:pfam01757 153 S-------------LLLLLLLLLLLLFLLYILILLVGVPFTVLVLFIFLYLPFFLLG--ALLARYRKRIRSKRLKLLIII 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 252 SlvaipllpLGAVLSGAMDGKAVDFNGGLSAAAVLYALWEPFVAWGIMAVLLVQFRLRFNVPSQRWKRW-GEEAYGAFFI 330
Cdd:pfam01757 218 L--------LALALLALILLLLFLFGLDPLALEFYGYPSLLLLLLGILLLLLLALLLANLRSLRRLLSYlGKYSFGIYLI 289
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1798378092 331 HAPVVVALSVLIAPW--PLPSLLKFLLVSVFGTALSFLLAR 369
Cdd:pfam01757 290 HPPILLLLGKLLGLLglPLLPILLFLLLLVLTLLVSVLLAR 330
WecH COG3274
Surface polysaccharide O-acyltransferase WecH [Cell wall/membrane/envelope biogenesis];
10-381 9.49e-09

Surface polysaccharide O-acyltransferase WecH [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442505 [Multi-domain]  Cd Length: 345  Bit Score: 56.54  E-value: 9.49e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  10 SGRTGFIDRLRVVLAALVIAHHAAITYggagswfyreVTDAGRPGSLLLTLFCAVNQSFFMG--MFFLLAGYFTPGSLQR 87
Cdd:COG3274     6 KKRIVYLDLLRVLAIFAVVLIHVTAPF----------VSSPGLIGSLNWWVANLLDSLSRFAvpLFFMISGALLLDRKKE 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  88 kGLRRFLLDRGVRLGVPLLVFGFVLGPMAVALGCIPKGQSVFTPWGDWLGSGAFvlgPLWFAWALLLFTLAW----ILWS 163
Cdd:COG3274    76 -DLKDFYKKRLRRILIPLLFWSLIYLLFFTFLGGFSFNSLSEFLKNLLTGGVSY---HLWFLYMIIGLYLFTpllrKLVR 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 164 RASPRTAWPrsgtqasmpsgpnWLLSAVLVGLAALGIRQWIPVGqnvLGLQLGYFASYVFLFFLGCRASAGRWLervsLE 243
Cdd:COG3274   152 KASKRELLY-------------FLLLWLILSLLLPYLNTLLGID---LFFTLTLFLGYLGYFLLGYYLARYKAR----LK 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 244 RARDWGLAS-LVAIPLLPLGAVLSGAMDGKAVDFngglsaaavLYALWEPFVAwgIMAVLLVQFRLRFNVPSQRWKRW-- 320
Cdd:COG3274   212 KRRLIALLLfLVGLALTFLGTYLLSLQTGKFNEL---------FYSYLSPNVV--LMSVALFLLLKNLSFRSSKLSRLls 280
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1798378092 321 --GEEAYGAFFIHAPVVVAL-SVLIAPWPLPSLLKFLLVSVFGTALSFLLARTLRALPGVTRVL 381
Cdd:COG3274   281 rlSKYSFGIYLIHPLVLDLLtKLGLNLLNINPLLGIPLVALLTFVLSLLIVLLLRKIPLLRKLV 344
NolL COG3594
Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism];
11-265 1.03e-05

Fucose 4-O-acetylase or related acetyltransferase [Carbohydrate transport and metabolism];


Pssm-ID: 442813  Cd Length: 270  Bit Score: 46.50  E-value: 1.03e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  11 GRTGFIDRLRVVLAALVIAHHAAITYGGAGSWFYrevtdagrpgSLLLTLFcavnqSFFMGMFFLLAGYFTPGSlqRKGL 90
Cdd:COG3594     6 KRDPWIDNAKGILIILVVLGHAIGPLIGDGDWLR----------ALYLFIY-----SFHMPLFFFISGYFSKPS--RNGF 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092  91 RRFLLDRGVRLGVPLLVFGFVLGPMAVALGciPKGQSVFTPWGDWLGsgafVLGPLWFAWALLLFTLAWILWSRasprta 170
Cdd:COG3594    69 KKFLKKKFKRLLVPYLIFQLIYSLFKFLVE--GGEPLDLSLLLLLLD----PNGALWFLPALFVWRLLLPLLRR------ 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1798378092 171 wprsgtqasMPSGPnwLLSAVLVGLAAlgirQWIPVGQNVLGLQLgyfASYVFLFFLgcrasAGRWLERVSLERARDWGL 250
Cdd:COG3594   137 ---------LRRWP--LLIALAIGLLA----GYLPSIGLPLSLDR---TLVFLPFFL-----LGYLLRKYHLERLRRLRV 193
                         250
                  ....*....|....*
gi 1798378092 251 AsLVAIPLLPLGAVL 265
Cdd:COG3594   194 L-LLAVAVFLAAALL 207
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH