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Conserved domains on  [gi|1815988396|ref|WP_163135278|]
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MULTISPECIES: DUF2970 domain-containing protein [Agarivorans]

Protein Classification

DUF2970 domain-containing protein( domain architecture ID 10567708)

DUF2970 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2970 pfam11174
Protein of unknown function (DUF2970); This short family is conserved in Proteobacteria. The ...
 3-55 1.28e-10

Protein of unknown function (DUF2970); This short family is conserved in Proteobacteria. The function is not known.


:

Pssm-ID: 463234  Cd Length: 56  Bit Score: 50.17  E-value: 1.28e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 1815988396  3 VLKSVLGALFGVQSDKQRQHDFSQGKAWKFILVGIIMVTLFVLAVAALVSVIT 55
Cdd:pfam11174  4 TLKSVLWAFFGVRSGKNRERDFARLSPLHYIIVGLILAALFVLGLILLVNLVL 56
 
Name Accession Description Interval E-value
DUF2970 pfam11174
Protein of unknown function (DUF2970); This short family is conserved in Proteobacteria. The ...
 3-55 1.28e-10

Protein of unknown function (DUF2970); This short family is conserved in Proteobacteria. The function is not known.


Pssm-ID: 463234  Cd Length: 56  Bit Score: 50.17  E-value: 1.28e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 1815988396  3 VLKSVLGALFGVQSDKQRQHDFSQGKAWKFILVGIIMVTLFVLAVAALVSVIT 55
Cdd:pfam11174  4 TLKSVLWAFFGVRSGKNRERDFARLSPLHYIIVGLILAALFVLGLILLVNLVL 56
 
Name Accession Description Interval E-value
DUF2970 pfam11174
Protein of unknown function (DUF2970); This short family is conserved in Proteobacteria. The ...
 3-55 1.28e-10

Protein of unknown function (DUF2970); This short family is conserved in Proteobacteria. The function is not known.


Pssm-ID: 463234  Cd Length: 56  Bit Score: 50.17  E-value: 1.28e-10
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 1815988396  3 VLKSVLGALFGVQSDKQRQHDFSQGKAWKFILVGIIMVTLFVLAVAALVSVIT 55
Cdd:pfam11174  4 TLKSVLWAFFGVRSGKNRERDFARLSPLHYIIVGLILAALFVLGLILLVNLVL 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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