|
Name |
Accession |
Description |
Interval |
E-value |
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
3-321 |
3.66e-57 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 190.07 E-value: 3.66e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGEIW--NPWSGgayrnACMQNSRYTFHYTGFP-PGDIDEFLGVEQVF 79
Cdd:COG2072 9 VVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWrdNRYPG-----LRLDTPSHLYSLPFFPnWSDDPDFPTGDEIL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 80 RYLSAVAGEDALRESIRLNTEVVSLRKDAGHRVIRCASEGKDTEDiFDRVIIATGELWQPRRPPLPGEENFSGTLITSRD 159
Cdd:COG2072 84 AYLEAYADKFGLRRPIRFGTEVTSARWDEADGRWTVTTDDGETLT-ARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSAD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 160 YQEPEAFKGKNILIIGGGVSGADIASDLVPFARSVSLSVKKMGLYLPRQFPTGPNDMMHSYLGRCLLSQMNYEDFIGYLD 239
Cdd:COG2072 163 WRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRPNYDPERGRPANYLGLEAPPALNRRDARAWLR 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 240 TMMPDYMQAYRASSLLPD--MANNNAVhVNEKIIPNVAAGLIK-VKPQAERFTGEGaIKFVDASQEKYDVIITCTGYEmP 316
Cdd:COG2072 243 RLLRAQVKDPELGLLTPDypPGCKRPL-LSTDYYEALRRGNVElVTGGIERITEDG-VVFADGTEHEVDVIVWATGFR-A 319
|
....*
gi 1816379684 317 DYSFI 321
Cdd:COG2072 320 DLPWL 324
|
|
| FMO-like |
pfam00743 |
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ... |
3-313 |
7.66e-39 |
|
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.
Pssm-ID: 395602 [Multi-domain] Cd Length: 531 Bit Score: 143.77 E-value: 7.66e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGEIW----NPWSGGA--YRNACMQNSRYTFHYTGFP-PGDIDEFLGV 75
Cdd:pfam00743 4 VAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWrfteNVEEGRAsiYKSVITNTSKEMSCFSDFPfPEDYPNFMHN 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 76 EQVFRYLSAVAGEDALRESIRLNTEVVSLRK-----DAGHRVIRCASEGKDTEDIFDRVIIATGELWQPRRP--PLPGEE 148
Cdd:pfam00743 84 SKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKrpdfsTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPleSFPGIE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 149 NFSGTLITSRDYQEPEAFKGKNILIIGGGVSGADIASDLVPFARSVSLSVKKMGLYLPRQFPTG-PNDMMHSYLGRCLLS 227
Cdd:pfam00743 164 KFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGyPWDMLFSTRFTSFLR 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 228 QMNYEDFigyLDTMMPDYMQA---YRASSLLP-DMANNNAVHVNEKIIPNVAAGLIKVKPQAERFTGEGAIkFVDAS-QE 302
Cdd:pfam00743 244 NILPTSI---SNWLMEKQMNRrfnHENYGLKPkNRALSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAI-FEDGTvEE 319
|
330
....*....|.
gi 1816379684 303 KYDVIITCTGY 313
Cdd:pfam00743 320 DIDVVIFATGY 330
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
2-219 |
1.72e-25 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 105.71 E-value: 1.72e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 2 NIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGEIWN--------PWS---------GGAYRNACMQNSRYTFHYTGF 64
Cdd:PLN02172 12 HVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVytpksesdPLSldptrsivhSSVYESLRTNLPRECMGYRDF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 65 P--PGDIDE------FLGVEQVFRYLSAVAGEDALRESIRLNTEVVSLRKDAGH-RVIRCASEGKDTEDIFDRVIIATGE 135
Cdd:PLN02172 92 PfvPRFDDEsrdsrrYPSHREVLAYLQDFAREFKIEEMVRFETEVVRVEPVDGKwRVQSKNSGGFSKDEIFDAVVVCNGH 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 136 LWQPRRPPLPGEENFSGTLITSRDYQEPEAFKGKNILIIGGGVSGADIASDLVPFARSVSLSVKKMGLYLPRQFPTGPND 215
Cdd:PLN02172 172 YTEPNVAHIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASRASESDTYEKLPVPQNN 251
|
....*
gi 1816379684 216 M-MHS 219
Cdd:PLN02172 252 LwMHS 256
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
1-196 |
2.56e-23 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 97.39 E-value: 2.56e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 1 MNIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIgeiwnPWSGGAYRNACMQnsrytfhytgfPPGDIDEFLGVEQVFR 80
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTC-----PYGGCVLSKALLG-----------AAEAPEIASLWADLYK 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 81 YLSAVAGEDALRESIRLNTEVVSLRKDAGHRVIRCASEGKDTEDIFDRVIIATGElwQPRRPPLPGEENFSGTLI-TSRD 159
Cdd:pfam07992 65 RKEEVVKKLNNGIEVLLGTEVVSIDPGAKKVVLEELVDGDGETITYDRLVIATGA--RPRLPPIPGVELNVGFLVrTLDS 142
|
170 180 190
....*....|....*....|....*....|....*...
gi 1816379684 160 YQEPE-AFKGKNILIIGGGVSGADIASDLVPFARSVSL 196
Cdd:pfam07992 143 AEALRlKLLPKRVVVVGGGYIGVELAAALAKLGKEVTL 180
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
3-196 |
5.58e-20 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 88.25 E-value: 5.58e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKN------TRIGEIWNpwsggayrnacmqnsrytfhYTGFPPGD-----IDE 71
Cdd:COG0492 3 VVIIGAGPAGLTAAIYAARAGLKTLVIEGGepggqlATTKEIEN--------------------YPGFPEGIsgpelAER 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 72 FlgVEQVFRYlsavagedalrESIRLNTEVVSLRKDAGHRVIrcasEGKDTEDIF-DRVIIATGelWQPRRPPLPGEENF 150
Cdd:COG0492 63 L--REQAERF-----------GAEILLEEVTSVDKDDGPFRV----TTDDGTEYEaKAVIIATG--AGPRKLGLPGEEEF 123
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1816379684 151 SGTLITSRDYQEPEAFKGKNILIIGGGVSGADIASDLVPFARSVSL 196
Cdd:COG0492 124 EGRGVSYCATCDGFFFRGKDVVVVGGGDSALEEALYLTKFASKVTL 169
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
3-184 |
1.14e-13 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 70.93 E-value: 1.14e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGeiwnpwsGgayrnacMqnSRYtfhytGFPP---------GDID--E 71
Cdd:COG0493 124 VAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPG-------G-------L--LRY-----GIPEfrlpkdvldREIEliE 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 72 FLGVEqvfrylsavagedalresIRLNTEVvslrkdaghrvircaseGKD--TEDI---FDRVIIATGeLWQPRRPPLPG 146
Cdd:COG0493 183 ALGVE------------------FRTNVEV-----------------GKDitLDELleeFDAVFLATG-AGKPRDLGIPG 226
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1816379684 147 EE--------NFsgtLITSRDYQEPEAF--KGKNILIIGGGVSGADIA 184
Cdd:COG0493 227 EDlkgvhsamDF---LTAVNLGEAPDTIlaVGKRVVVIGGGNTAMDCA 271
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
3-185 |
2.00e-13 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 70.59 E-value: 2.00e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNtrigeiwnPWSGGAYRNACMQ-----NSRYTFHYTGfppgDIDEFlGV-- 75
Cdd:PRK06292 6 VIVIGAGPAGYVAARRAAKLGKKVALIEKG--------PLGGTCLNVGCIPskaliAAAEAFHEAK----HAEEF-GIha 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 76 -------EQVFRYLSAVAgeDALRESIRLntevvSLRKDAGHRVI----RCASEGK---DTEDI-FDRVIIATGElwqpR 140
Cdd:PRK06292 73 dgpkidfKKVMARVRRER--DRFVGGVVE-----GLEKKPKIDKIkgtaRFVDPNTvevNGERIeAKNIVIATGS----R 141
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1816379684 141 RPPLPGEEN-FSGTLITSRDYQEPEAFkGKNILIIGGGVSGADIAS 185
Cdd:PRK06292 142 VPPIPGVWLiLGDRLLTSDDAFELDKL-PKSLAVIGGGVIGLELGQ 186
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
3-182 |
1.74e-12 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 67.50 E-value: 1.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGEIWnpwsggayrnacmqnsRYtfhytGFP----PGDIdeflgVEQV 78
Cdd:PRK12810 146 VAVVGSGPAGLAAADQLARAGHKVTVFERADRIGGLL----------------RY-----GIPdfklEKEV-----IDRR 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 79 FRYLSAvagedalrESI--RLNTEVvslrkdaghrvircaseGKDT-----EDIFDRVIIATGeLWQPRRPPLPGEEnFS 151
Cdd:PRK12810 200 IELMEA--------EGIefRTNVEV-----------------GKDItaeelLAEYDAVFLGTG-AYKPRDLGIPGRD-LD 252
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1816379684 152 G--------TLITSR----DYQEPEAFKGKNILIIGGGVSGAD 182
Cdd:PRK12810 253 GvhfamdflIQNTRRvlgdETEPFISAKGKHVVVIGGGDTGMD 295
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
1-188 |
2.43e-12 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 67.29 E-value: 2.43e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 1 MNIAIIGAGPAGIISARNAIKAGH---SVVLFEKNTRIGeiwnpwSGGAYRNAC-----------MQ------------- 53
Cdd:COG4529 6 KRIAIIGGGASGTALAIHLLRRAPeplRITLFEPRPELG------RGVAYSTDSpehllnvpagrMSafpddpdhflrwl 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 54 NSRYTFHYTGFPPGDideFLGvEQVF-RYLSAVAGE--DALRESIRL---NTEVVSLRKDAGHRVIRCASegkDTEDIFD 127
Cdd:COG4529 80 RENGARAAPAIDPDA---FVP-RRLFgEYLRERLAEalARAPAGVRLrhiRAEVVDLERDDGGYRVTLAD---GETLRAD 152
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1816379684 128 RVIIATGELWqPRRPPLPGEEnfSGTLItsRDYQEPEAFK----GKNILIIGGGVSGADIASDLV 188
Cdd:COG4529 153 AVVLATGHPP-PAPPPGLAAG--SPRYI--ADPWPPGALArippDARVLIIGTGLTAIDVVLSLA 212
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
10-188 |
4.98e-12 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 65.32 E-value: 4.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 10 PAGIISARNAIKAG-HSVVLFEKNtRIGEIWNPWsggaYRNacMQNSRYTFHYTGFPPGDI--------------DEFLG 74
Cdd:pfam13738 1 PAGIGCAIALKKAGlEDYLILEKG-NIGNSFYRY----PTH--MTFFSPSFTSNGFGIPDLnaispgtspaftfnREHPS 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 75 VEQVFRYLSAVAGEDALResIRLNTEVVSLRKDAGHRVIRCasegkDTEDIF-DRVIIATGELWQPRRPplpgeeNFSGT 153
Cdd:pfam13738 74 GNEYAEYLRRVADHFELP--INLFEEVTSVKKEDDGFVVTT-----SKGTYQaRYVIIATGEFDFPNKL------GVPEL 140
|
170 180 190
....*....|....*....|....*....|....*
gi 1816379684 154 LITSRDYQEPEAFKGKNILIIGGGVSGADIASDLV 188
Cdd:pfam13738 141 PKHYSYVKDFHPYAGQKVVVIGGYNSAVDAALELV 175
|
|
| TIGR00275 |
TIGR00275 |
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ... |
4-134 |
7.81e-12 |
|
flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 272992 [Multi-domain] Cd Length: 400 Bit Score: 65.31 E-value: 7.81e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 4 AIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGE---IwnpwSGGA---YRNACMQNSRYTFHYTG----------FPPG 67
Cdd:TIGR00275 1 IIIGGGAAGLMAAITAARAGLSVLLLEKNKKIGKkllI----SGGGrcnLTNSCPTPEFVAYYPRNgkflrsalsrFSNK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 68 DIDEF---LGVE-------QVF-RYLSAVAGEDALRE-------SIRLNTEVVSLRKDAGHRVIRCasegkDTEDI-FDR 128
Cdd:TIGR00275 77 DLIDFfesLGLElkveedgRVFpCSDSAADVLDALLNelkelgvEILTNSKVKSIEKEDGGFGVET-----SGGEYeADK 151
|
....*.
gi 1816379684 129 VIIATG 134
Cdd:TIGR00275 152 VIIATG 157
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
4-134 |
8.46e-12 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 65.46 E-value: 8.46e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 4 AIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGE---IwnpwSGGAyR----NACMQNSRYTFHYT----------GFPP 66
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLLEKNPKVGRkilI----SGGG-RcnftNSEPLPEFLNYYGGnphflksalsRFTP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 67 GDIDEF---LGVE-------QVF----------RYLsavagEDALRES---IRLNTEVVSLRKDAGHRVIRCaSEGKDTE 123
Cdd:COG2081 76 EDLIAFfegLGIEtkeessgRVFpdsskasdilRAL-----LAELREAgveIRLRTRVTGIEKEDGGFGVET-PDGETVR 149
|
170
....*....|.
gi 1816379684 124 diFDRVIIATG 134
Cdd:COG2081 150 --ADAVVLATG 158
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
3-184 |
1.42e-11 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 64.82 E-value: 1.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGEIwnpwsggayrnacmqnSRYtfhytGFP----PGDIdeflgveqV 78
Cdd:PRK11749 143 VAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGL----------------LRY-----GIPefrlPKDI--------V 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 79 FRYLsavageDALRE---SIRLNTEVvslrkdaghrvircaseGKDT--EDIFDR---VIIATGeLWQPRRPPLPGeENF 150
Cdd:PRK11749 194 DREV------ERLLKlgvEIRTNTEV-----------------GRDItlDELRAGydaVFIGTG-AGLPRFLGIPG-ENL 248
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1816379684 151 SGT------LITSR----DYQEPeafKGKNILIIGGGVSGADIA 184
Cdd:PRK11749 249 GGVysavdfLTRVNqavaDYDLP---VGKRVVVIGGGNTAMDAA 289
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
3-140 |
5.23e-11 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 62.98 E-value: 5.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGE---IwnpwSGGAyR----NACMQNSRYTFHYTG-----------F 64
Cdd:pfam03486 3 VIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRkilI----SGGG-RcnvtNLSEEPDNFLSRYPGnpkflksalsrF 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 65 PPGDIDEF---LGVE-------QVF-RYLSAVAGEDALRE-------SIRLNTEVVSLRKDAGHRVIRCASEGKDTediF 126
Cdd:pfam03486 78 TPWDFIAFfesLGVPlkeedhgRLFpDSDKASDIVDALLNelkelgvKIRLRTRVLSVEKDDDGRFRVKTGGEELE---A 154
|
170
....*....|....
gi 1816379684 127 DRVIIATGELWQPR 140
Cdd:pfam03486 155 DSLVLATGGLSWPK 168
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
3-185 |
1.34e-10 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 62.03 E-value: 1.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNT------RIGEIwnP----WSGGAYRNACMQNSRYTFHytgFPPGDIDef 72
Cdd:COG1249 6 LVVIGAGPGGYVAAIRAAQLGLKVALVEKGRlggtclNVGCI--PskalLHAAEVAHEARHAAEFGIS---AGAPSVD-- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 73 lgVEQVFRYLSAVAGedalresiRLNTEVVSLRKDAGHRVIRcaSEGK----------DTEDI-FDRVIIATGElwQPRR 141
Cdd:COG1249 79 --WAALMARKDKVVD--------RLRGGVEELLKKNGVDVIR--GRARfvdphtvevtGGETLtADHIVIATGS--RPRV 144
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1816379684 142 PPLPGEEnfSGTLITSRDYQEPEAFkGKNILIIGGGVSGADIAS 185
Cdd:COG1249 145 PPIPGLD--EVRVLTSDEALELEEL-PKSLVVIGGGYIGLEFAQ 185
|
|
| NAD_binding_9 |
pfam13454 |
FAD-NAD(P)-binding; |
4-136 |
2.33e-10 |
|
FAD-NAD(P)-binding;
Pssm-ID: 433222 [Multi-domain] Cd Length: 155 Bit Score: 58.06 E-value: 2.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 4 AIIGAGPAGIISA----RNAIKAGHSVVLFEKNtrigeiwNPWSGGAYRNAC----MQNSRYTF--HYTGFPP------- 66
Cdd:pfam13454 1 AIVGGGPSGLALLerllARAPKRPLEITLFDPS-------PPGAGGVYRTDQspehLLNVPASRmsLFPDDPPhflewlr 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 67 --GDIDEFLGVE-------QVF-RYLSAVAGE--DALRESIRL---NTEVVSLRKDAGHRVIRCASEGKDTediFDRVII 131
Cdd:pfam13454 74 arGALDEAPGLDpddfpprALYgRYLRDRFEEalARAPAGVTVrvhRARVTDLRPRGDGYRVLLADGRTLA---ADAVVL 150
|
....*
gi 1816379684 132 ATGEL 136
Cdd:pfam13454 151 ATGHG 155
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
1-145 |
6.39e-08 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 53.34 E-value: 6.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 1 MNIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIG----------------------------------------EIW- 39
Cdd:COG3380 4 PDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGgrmatrrldggrfdhgaqyftardprfqalveewlaaglvAPWt 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 40 -NPWSGGAYRNACMQNSRYTfHYTGfPPGdideflgveqvfryLSAVA---GEDAlreSIRLNTEVVSLRKDAGHRVIRC 115
Cdd:COG3380 84 fDFVVLDADGLVSPRDDGEP-RYVG-VPG--------------MNALAkhlAAGL---DVRLGTRVTALERDGDGWRLTD 144
|
170 180 190
....*....|....*....|....*....|
gi 1816379684 116 ASEgkDTEDIFDRVIIAtgelwqprrPPLP 145
Cdd:COG3380 145 EDG--EEYGPFDAVVLA---------IPAP 163
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
2-142 |
1.63e-07 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 52.55 E-value: 1.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 2 NIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGeiwnpwsgGAyrnacMQNSRYTFhytgfpPGDIDEFLGVEQVFRy 81
Cdd:COG1148 142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPELG--------GR-----AAQLHKTF------PGLDCPQCILEPLIA- 201
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1816379684 82 lsAVAGEDALResIRLNTEVVSLRKDAGHRVIRCASEGKDTEDI-FDRVIIATGelWQPRRP 142
Cdd:COG1148 202 --EVEANPNIT--VYTGAEVEEVSGYVGNFTVTIKKGPREEIEIeVGAIVLATG--FKPYDP 257
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
3-184 |
2.76e-07 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 51.53 E-value: 2.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNtrigeiwnPWSGGAYrnacmqnsryTFHYTGF--PPGDIDEflGVEqvfr 80
Cdd:PRK12770 21 VAIIGAGPAGLAAAGYLACLGYEVHVYDKL--------PEPGGLM----------LFGIPEFriPIERVRE--GVK---- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 81 ylsavagedALRE---SIRLNTEVVSLRKDAGHRVIRCASEGKDTEDI---FDRVIIATGElWQPRRPPLPGEeNFSGTL 154
Cdd:PRK12770 77 ---------ELEEagvVFHTRTKVCCGEPLHEEEGDEFVERIVSLEELvkkYDAVLIATGT-WKSRKLGIPGE-DLPGVY 145
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1816379684 155 -------------ITSRDYQEPEAFKGKNILIIGGGVSGADIA 184
Cdd:PRK12770 146 saleylfriraakLGYLPWEKVPPVEGKKVVVVGAGLTAVDAA 188
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
2-36 |
4.57e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 51.04 E-value: 4.57e-07
10 20 30
....*....|....*....|....*....|....*
gi 1816379684 2 NIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIG 36
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLG 35
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
1-36 |
5.96e-07 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 50.60 E-value: 5.96e-07
10 20 30
....*....|....*....|....*....|....*.
gi 1816379684 1 MNIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIG 36
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVG 37
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
3-36 |
7.50e-07 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 50.30 E-value: 7.50e-07
10 20 30
....*....|....*....|....*....|....
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIG 36
Cdd:COG1231 10 VVIVGAGLAGLAAARELRKAGLDVTVLEARDRVG 43
|
|
| lipoamide_DH |
TIGR01350 |
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ... |
2-185 |
1.69e-06 |
|
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Pssm-ID: 273568 [Multi-domain] Cd Length: 460 Bit Score: 49.18 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 2 NIAIIGAGPAGIISARNAIKAGHSVVLFEKNTrigeiwnpwSGGAYRNA-C-----MQNSRYTFHYtgfppgdIDEF--L 73
Cdd:TIGR01350 3 DVIVIGGGPGGYVAAIRAAQLGLKVALVEKEY---------LGGTCLNVgCiptkaLLHSAEVYDE-------IKHAkdL 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 74 GVEQvfrylsavagedalrESIRLNTEVVSLRKDA----------------------GHRVIRCASE----GKDTED--I 125
Cdd:TIGR01350 67 GIEV---------------ENVSVDWEKMQKRKNKvvkklvggvsgllkknkvtvikGEAKFLDPGTvsvtGENGEEtlE 131
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 126 FDRVIIATGElwQPRRPPLPGEENfSGTLITSRDYQEPEAFKgKNILIIGGGVSGADIAS 185
Cdd:TIGR01350 132 AKNIIIATGS--RPRSLPGPFDFD-GKVVITSTGALNLEEVP-ESLVIIGGGVIGIEFAS 187
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
95-177 |
2.71e-06 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 48.27 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 95 IRLNTEVVSLrkDAGHRVIRCASEGKDTediFDRVIIATGElwQPRRPPLPGEENfSGTLiTSRDYQEPEA-------FK 167
Cdd:COG0446 53 VRTGTEVTAI--DPEAKTVTLRDGETLS---YDKLVLATGA--RPRPPPIPGLDL-PGVF-TLRTLDDADAlrealkeFK 123
|
90
....*....|
gi 1816379684 168 GKNILIIGGG 177
Cdd:COG0446 124 GKRAVVIGGG 133
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
1-117 |
2.95e-06 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 48.01 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 1 MNIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGE-------------------IW-------NPWSGGAYRNACMQN 54
Cdd:COG0654 4 TDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPdgrgialsprslellrrlgLWdrllargAPIRGIRVRDGSDGR 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1816379684 55 SRYTFHY--TGFPPGdidefLGVEQ--VFRYLSAVAgeDALRESIRLNTEVVSLRKDAGHRVIRCAS 117
Cdd:COG0654 84 VLARFDAaeTGLPAG-----LVVPRadLERALLEAA--RALGVELRFGTEVTGLEQDADGVTVTLAD 143
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
8-134 |
4.52e-06 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 47.27 E-value: 4.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 8 AGPAGIISARNAIKAGHSVVLFEKNTRIG-------------EIWNPWSGGAYRNACMQNSRYTF---HYTGFPPGDIDE 71
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGdkicgggllpralEELEPLGLDEPLERPVRGARFYSpggKSVELPPGRGGG 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1816379684 72 FlgveQVFR-----YLSAVAGEDALResIRLNTEVVSLRKDAGHRVIRCasegKDTEDI-FDRVIIATG 134
Cdd:COG0644 81 Y----VVDRarfdrWLAEQAEEAGAE--VRTGTRVTDVLRDDGRVVVRT----GDGEEIrADYVVDADG 139
|
|
| PRK09564 |
PRK09564 |
coenzyme A disulfide reductase; Reviewed |
94-196 |
1.39e-05 |
|
coenzyme A disulfide reductase; Reviewed
Pssm-ID: 181958 [Multi-domain] Cd Length: 444 Bit Score: 46.19 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 94 SIRLNTEVVSLRKDAGHRVIRCASEGKDTEDIFDRVIIATGElwQPRRPPLPG--EENFSgTLITSRDYQE-PEAFKG-- 168
Cdd:PRK09564 72 DVKTEHEVVKVDAKNKTITVKNLKTGSIFNDTYDKLMIATGA--RPIIPPIKNinLENVY-TLKSMEDGLAlKELLKDee 148
|
90 100
....*....|....*....|....*....
gi 1816379684 169 -KNILIIGGGVSGADIASDLVPFARSVSL 196
Cdd:PRK09564 149 iKNIVIIGAGFIGLEAVEAAKHLGKNVRI 177
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
1-38 |
1.66e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 45.84 E-value: 1.66e-05
10 20 30
....*....|....*....|....*....|....*...
gi 1816379684 1 MNIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGEI 38
Cdd:PRK06753 1 MKIAIIGAGIGGLTAAALLQEQGHEVKVFEKNESVKEV 38
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
5-36 |
2.26e-05 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 41.75 E-value: 2.26e-05
10 20 30
....*....|....*....|....*....|..
gi 1816379684 5 IIGAGPAGIISARNAIKAGHSVVLFEKNTRIG 36
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLG 32
|
|
| Lys_Orn_oxgnase |
pfam13434 |
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold ... |
2-187 |
2.93e-05 |
|
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold oxidoreductases that catalyze NADPH-dependent hydroxylation and are involved in siderophore biosynthesis. This family includes L-ornithine 5-monooxygenase, which catalyzes the hydroxylation of L-ornithine at the N5 position, and L-lysine 6-monooxygenase, which catalyzes the hydroxylation of lysine at the N6 position (EC:1.14.13.59).
Pssm-ID: 433204 [Multi-domain] Cd Length: 338 Bit Score: 45.27 E-value: 2.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 2 NIAIIGAGPAGI-ISARNAIKAGHSVVLFEKNTRIGeiWNPwsGGAYRNACMQN-------------SRYTF----HYTG 63
Cdd:pfam13434 4 DLIGIGIGPFNLsLAALLEEIPELDALFFERQPEFA--WHP--GMLLPGATMQTsflkdlvtlrdptSPFSFlnylHEHG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 64 FPPGDIdeFLGVEQVFR-----YLSAVAGedALRESIRLNTEVVSLRKDAG----HRVIRCASEGKDTEDIFDR-VIIAT 133
Cdd:pfam13434 80 RLYSFY--NLETFFPSRrefndYLQWAAS--HLPNRLRFGQEVESVEPDAErgepLLRVRVRDADGEETTFLARnLVLGT 155
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1816379684 134 GElwQPRRPP-LPGeenfSGTLITSRDY--QEPEAFKGKNILIIGGGVSGADIASDL 187
Cdd:pfam13434 156 GG--EPYIPEcARG----GERVFHSSEYleRIDRLAAKKRIAVVGSGQSAAEIFRDL 206
|
|
| COG2509 |
COG2509 |
FAD-dependent dehydrogenase [General function prediction only]; |
3-134 |
3.02e-05 |
|
FAD-dependent dehydrogenase [General function prediction only];
Pssm-ID: 441999 [Multi-domain] Cd Length: 466 Bit Score: 45.49 E-value: 3.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGE----IWNPWSGGayrnACMQNSRYTFhytGF-------------- 64
Cdd:COG2509 33 VVIVGAGPAGLFAALELAEAGLKPLVLERGKDVEErtcpVAEFWRKG----KCNPESNIQF---GEggagtfsdgklntr 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 65 ---PPGDIDEflgVEQVFryLSAVAGED-------------------ALRESI-------RLNTEVVSLRKDAGH-RVIR 114
Cdd:COG2509 106 skdPQGLIRY---VLEIF--VKFGAPEEilyaakphigtdklpkvvkNIREYIeelggeiRFNTRVTDILIEDGRvKGVV 180
|
170 180
....*....|....*....|.
gi 1816379684 115 CAsegkDTEDIF-DRVIIATG 134
Cdd:COG2509 181 TN----DGEEIEaDAVILAPG 197
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
1-36 |
5.49e-05 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 44.34 E-value: 5.49e-05
10 20 30
....*....|....*....|....*....|....*.
gi 1816379684 1 MNIAIIGAGPAGIISARnAIKAGHSVVLFEKNTRIG 36
Cdd:COG2907 4 MRIAVIGSGISGLTAAW-LLSRRHDVTLFEANDRLG 38
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
3-36 |
7.23e-05 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 44.07 E-value: 7.23e-05
10 20 30
....*....|....*....|....*....|....*.
gi 1816379684 3 IAIIGAGPAGIISArnAI--KAGHSVVLFEKNTRIG 36
Cdd:COG1233 6 VVVIGAGIGGLAAA--ALlaRAGYRVTVLEKNDTPG 39
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
3-50 |
7.50e-05 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 43.93 E-value: 7.50e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGeiwnpwSGGAYRNA 50
Cdd:pfam01266 2 VVVIGGGIVGLSTAYELARRGLSVTLLERGDDPG------SGASGRNA 43
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
2-38 |
7.94e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 44.11 E-value: 7.94e-05
10 20 30
....*....|....*....|....*....|....*..
gi 1816379684 2 NIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGEI 38
Cdd:PRK07208 6 SVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGI 42
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
2-134 |
1.50e-04 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 42.88 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 2 NIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIgeiwnpwsggayrnacmqnsrytfhytgFPPGDIDeflgveqvfry 81
Cdd:COG0446 126 RAVVIGGGPIGLELAEALRKRGLKVTLVERAPRL----------------------------LGVLDPE----------- 166
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1816379684 82 LSAVAgEDALRES---IRLNTEVVSLRKDAGHRVIrcaSEGKDTEDiFDRVIIATG 134
Cdd:COG0446 167 MAALL-EEELREHgveLRLGETVVAIDGDDKVAVT---LTDGEEIP-ADLVVVAPG 217
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
80-133 |
1.50e-04 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 43.18 E-value: 1.50e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1816379684 80 RYLSAVAgeDALRESIRLNTEVVSLRKDAGHRVIRCASegkDTEDIFDRVIIAT 133
Cdd:COG2907 215 EYVRRLT--AGLKDRIRLNTPVRSVRRDADGVEVRTAD---GEEERFDHVVFAT 263
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
1-50 |
1.60e-04 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 42.97 E-value: 1.60e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 1816379684 1 MNIAIIGAGPAGIISARNAIKAGHSVVLFEKNtRIGeiwnpwSGGAYRNA 50
Cdd:COG0665 3 ADVVVIGGGIAGLSTAYHLARRGLDVTVLERG-RPG------SGASGRNA 45
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
3-184 |
2.75e-04 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 42.41 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKntrigeiwNPWSGGayrnacMQnsRYtfhytGFPPgdideflgveqvFRyl 82
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDA--------NEQAGG------MM--RY-----GIPR------------FR-- 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 83 savagedaLRESIrLNTEVVSLRKDAGHrvIRCASE-GKD--TEDI---FDRVIIATGELwQPRRPPLPGEENFSgtlIT 156
Cdd:PRK12814 241 --------LPESV-IDADIAPLRAMGAE--FRFNTVfGRDitLEELqkeFDAVLLAVGAQ-KASKMGIPGEELPG---VI 305
|
170 180 190
....*....|....*....|....*....|....
gi 1816379684 157 S-----RDYQEPEAFK-GKNILIIGGGVSGADIA 184
Cdd:PRK12814 306 SgidflRNVALGTALHpGKKVVVIGGGNTAIDAA 339
|
|
| IucD |
COG3486 |
Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport and catabolism] ... |
80-187 |
3.11e-04 |
|
Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442709 [Multi-domain] Cd Length: 440 Bit Score: 42.08 E-value: 3.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 80 RYLSAVAgeDALrESIRLNTEVVSLR--KDAGHRVIRCASEGKDTEDIFDR-VIIATGelwqpRRPPLPG--EENFSGTL 154
Cdd:COG3486 103 DYCRWAA--EQL-DNVRFGTEVEAVEydDDAGAFRVTVRDGTGERETYRARnLVLGTG-----TRPYLPEcfRGLPGERV 174
|
90 100 110
....*....|....*....|....*....|....*
gi 1816379684 155 ITSRDY--QEPEAFKGKNILIIGGGVSGADIASDL 187
Cdd:COG3486 175 FHSSEYlhRKEDLQAAKRVTVVGSGQSAAEIFLDL 209
|
|
| PRK04965 |
PRK04965 |
NADH:flavorubredoxin reductase NorW; |
86-196 |
3.37e-04 |
|
NADH:flavorubredoxin reductase NorW;
Pssm-ID: 179902 [Multi-domain] Cd Length: 377 Bit Score: 41.83 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 86 AGEDALRESIRL--NTEVVSLrkDAGHRVIRCASEGKDtediFDRVIIATGElwQPRRPPLPGeenfSGTLITSRDYQEP 163
Cdd:PRK04965 64 AGEFAEQFNLRLfpHTWVTDI--DAEAQVVKSQGNQWQ----YDKLVLATGA--SAFVPPIPG----RELMLTLNSQQEY 131
|
90 100 110
....*....|....*....|....*....|....*...
gi 1816379684 164 EAFKG-----KNILIIGGGVSGADIASDLVPFARSVSL 196
Cdd:PRK04965 132 RAAETqlrdaQRVLVVGGGLIGTELAMDLCRAGKAVTL 169
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
1-38 |
3.48e-04 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 41.54 E-value: 3.48e-04
10 20 30
....*....|....*....|....*....|....*...
gi 1816379684 1 MNIAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIGEI 38
Cdd:TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYK 38
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
88-142 |
4.56e-04 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 41.61 E-value: 4.56e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1816379684 88 EDALRES---IRLNTEVVSLRKDAGHRVIRCASEGKDTEDIFDRVIIATGelwqpRRP 142
Cdd:COG1249 216 EKALEKEgidILTGAKVTSVEKTGDGVTVTLEDGGGEEAVEADKVLVATG-----RRP 268
|
|
| FAD_oxidored |
pfam12831 |
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ... |
3-36 |
4.84e-04 |
|
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.
Pssm-ID: 432816 [Multi-domain] Cd Length: 420 Bit Score: 41.44 E-value: 4.84e-04
10 20 30
....*....|....*....|....*....|....
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIG 36
Cdd:pfam12831 2 VVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLG 35
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
3-36 |
5.65e-04 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 41.78 E-value: 5.65e-04
10 20 30
....*....|....*....|....*....|....
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKNTRIG 36
Cdd:PLN02976 696 IIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIG 729
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
3-185 |
8.27e-04 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 41.01 E-value: 8.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 3 IAIIGAGPAGIISARNAIKAGHSVVLFEKntrigeiwNPWSGG-------AYRnacmqnsrytfhytgFPPGDID----- 70
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEA--------GPKLGGmmrygipAYR---------------LPREVLDaeiqr 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 71 -EFLGVEqvfrylsavagedalresIRLNTEV---VSLRKDAGHrvircasegkdtediFDRVIIATGELwQPRRPPLPG 146
Cdd:PRK12771 197 iLDLGVE------------------VRLGVRVgedITLEQLEGE---------------FDAVFVAIGAQ-LGKRLPIPG 242
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1816379684 147 EEnfSGTLITS----RDYQEPEA-FKGKNILIIGGGVSGADIAS 185
Cdd:PRK12771 243 ED--AAGVLDAvdflRAVGEGEPpFLGKRVVVIGGGNTAMDAAR 284
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
102-185 |
1.43e-03 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 40.13 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1816379684 102 VSLRKDAGHRVIrcasEGKDtedifdrVIIATGElwQPRRppLPGEEnFSG-TLITSRDYQEPEAFKgKNILIIGGGVSG 180
Cdd:PRK06416 122 VRVMTEDGEQTY----TAKN-------IILATGS--RPRE--LPGIE-IDGrVIWTSDEALNLDEVP-KSLVVIGGGYIG 184
|
....*
gi 1816379684 181 ADIAS 185
Cdd:PRK06416 185 VEFAS 189
|
|
| PRK15317 |
PRK15317 |
alkyl hydroperoxide reductase subunit F; Provisional |
129-196 |
2.59e-03 |
|
alkyl hydroperoxide reductase subunit F; Provisional
Pssm-ID: 237942 [Multi-domain] Cd Length: 517 Bit Score: 39.37 E-value: 2.59e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1816379684 129 VIIATGELWqpRRPPLPGEENF-----------SGTLitsrdyqepeaFKGKNILIIGGGVSGADIASDLVPFARSVSL 196
Cdd:PRK15317 314 VILATGARW--RNMNVPGEDEYrnkgvaycphcDGPL-----------FKGKRVAVIGGGNSGVEAAIDLAGIVKHVTV 379
|
|
| PRK12409 |
PRK12409 |
D-amino acid dehydrogenase small subunit; Provisional |
2-43 |
6.85e-03 |
|
D-amino acid dehydrogenase small subunit; Provisional
Pssm-ID: 237093 [Multi-domain] Cd Length: 410 Bit Score: 38.08 E-value: 6.85e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1816379684 2 NIAIIGAGPAGIISARNAIKAGHSVVLFEKN------TRI----------GEIWNPWS 43
Cdd:PRK12409 3 HIAVIGAGITGVTTAYALAQRGYQVTVFDRHryaameTSFanggqlsasnAEVWNHWA 60
|
|
| |
