|
Name |
Accession |
Description |
Interval |
E-value |
| FabH |
COG0332 |
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ... |
6-340 |
1.07e-62 |
|
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis
Pssm-ID: 440101 [Multi-domain] Cd Length: 323 Bit Score: 202.26 E-value: 1.07e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 6 RARIAAVTAHLPTRYRTMDEIREKIAKSGEYapppglLEDLTGVRGVHVRGDGEDASDLATAAARAALDEAGLRIGDIDL 85
Cdd:COG0332 2 NVRILGTGSYLPERVVTNDDLEKRLDTSDEW------IEERTGIRERRIAAPDETTSDLAVEAARKALEAAGIDPEDIDL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 86 LLFAATAADLIEPATSHLVAAKMGAT-CPVFDVKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVTRWNvpDRQA 164
Cdd:COG0332 76 IIVATVTPDYLFPSTACLVQHKLGAKnAAAFDINAACSGFVYALSVAAALIRSGQAKNVLVVGAETLSRIVDWT--DRST 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 165 LLralpgyTASDAGAAMVLTagpAGEDGPGITAMRFVSNSAAWEACTVSGGGTMHQRSVHDDHT-TLRLNG-DLRQGLLD 242
Cdd:COG0332 154 CV------LFGDGAGAVVLE---ASEEGPGILGSVLGSDGSGADLLVVPAGGSRNPPSPVDEGDhYLRMDGrEVFKFAVR 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 243 ILPD----ALAVAG---DELaaaragAFVAFHQIAMPQYRQMLDLFSLPESVCLPAVAEHGNCAAASLPLQLVKAREADR 315
Cdd:COG0332 225 NLPEvireALEKAGltlDDI------DWFIPHQANLRIIEAVAKRLGLPEEKVVVNIDRYGNTSAASIPLALDEALREGR 298
|
330 340
....*....|....*....|....*
gi 1817702832 316 VEAGDTVAMLGVASGLSFGLALVRW 340
Cdd:COG0332 299 IKPGDLVLLAGFGAGLTWGAAVLRW 323
|
|
| KAS_III |
cd00830 |
Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty ... |
6-338 |
1.15e-50 |
|
Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Pssm-ID: 238426 [Multi-domain] Cd Length: 320 Bit Score: 171.18 E-value: 1.15e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 6 RARIAAVTAHLPTRYRTMDEIREKIAKSGEYapppglLEDLTGVRGVHVRGDGEDASDLATAAARAALDEAGLRIGDIDL 85
Cdd:cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEW------IRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 86 LLFAATAADLIEPATSHLVAAKMGAT-CPVFDVKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVTRWNvpDRqa 164
Cdd:cd00830 75 IIVATSTPDYLFPATACLVQARLGAKnAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWT--DR-- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 165 LLRALPGytasDAGAAMVLTagpAGEDGPGITAMRFVSNSAAWEACTVSGGGTMHQRSVHDDHT-TLRLNGDLR-----Q 238
Cdd:cd00830 151 STAVLFG----DGAGAVVLE---ATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDpYLVMDGREVfkfavR 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 239 GLLDILPDALAVAG---DELaaaragAFVAFHQIAMPQYRQMLDLFSLPESVCLPAVAEHGNCAAASLPLQLVKAREADR 315
Cdd:cd00830 224 LMPESIEEALEKAGltpDDI------DWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEGK 297
|
330 340
....*....|....*....|...
gi 1817702832 316 VEAGDTVAMLGVASGLSFGLALV 338
Cdd:cd00830 298 LKKGDLVLLLGFGAGLTWGAALL 320
|
|
| PRK09258 |
PRK09258 |
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed |
5-340 |
7.38e-36 |
|
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Pssm-ID: 181732 Cd Length: 338 Bit Score: 132.70 E-value: 7.38e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 5 ARARIAAVTAHLPTRYRTMDEIREKIAksgeyaP-------PPGLLEDLTGVRGVHVRGDGEDASDLATAAARAALDEAG 77
Cdd:PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLA------PlyerlrlPPGQLEALTGIRERRWWPEGTQLSDGAIAAGRKALAEAG 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 78 LRIGDIDLLLFAATAADLIEPATSHLVAAKMG--ATCPVFDVKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVT 155
Cdd:PRK09258 78 IDPSDIGLLINTSVCRDYLEPATACRVHHNLGlpKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 156 -----RWNVPD--RQALLRALPGYTASDAGAAMVLTAGPAGEDGPGItaMRFVSNSAAwEACTVSGGGTMHQRSvhdDHT 228
Cdd:PRK09258 158 eatidRLLAPEttREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRL--LGGVTRAAT-EHHELCQGGRDGMRT---DAV 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 229 TLRLNGdlrqglLDILPDALAVAGDELA-AARAGAFVAFHQIAMPQYRQMLDLFSLPESVCLPAVAEHGNCAAASLPLQL 307
Cdd:PRK09258 232 GLLKEG------VELAVDTWEAFLAQLGwAVEQVDRVICHQVGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITL 305
|
330 340 350
....*....|....*....|....*....|...
gi 1817702832 308 VKAREADRVEAGDTVAMLGVASGLSFGLALVRW 340
Cdd:PRK09258 306 AMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338
|
|
| PRK09352 |
PRK09352 |
beta-ketoacyl-ACP synthase 3; |
6-340 |
1.52e-33 |
|
beta-ketoacyl-ACP synthase 3;
Pssm-ID: 236475 [Multi-domain] Cd Length: 319 Bit Score: 125.96 E-value: 1.52e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 6 RARIAAVTAHLPTRYRTMDEIREKIAKSGEYapppglLEDLTGVRGVHVRGDGEDASDLATAAARAALDEAGLRIGDIDL 85
Cdd:PRK09352 3 YAKILGTGSYLPERVVTNDDLEKMVDTSDEW------IVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 86 LLFAATAADLIEPATSHLVAAKMGAT-CPVFDVKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVTRWNvpDRQa 164
Cdd:PRK09352 77 IIVATTTPDYAFPSTACLVQARLGAKnAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIVDWT--DRS- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 165 llralpgyTA---SDAGAAMVLTAGpageDGPGITAMRFVSNSAAWEACTVSGGGTMHQRSVHddhtTLRLNGdlRQ--- 238
Cdd:PRK09352 154 --------TCvlfGDGAGAVVLGAS----EEPGILSTHLGSDGSYGDLLYLPGGGSRGPASPG----YLRMEG--REvfk 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 239 ----GLLDILPDALAVAG---DELaaaragafVAF--HQ--------IAmpqyrqmlDLFSLPESVCLPAVAEHGNCAAA 301
Cdd:PRK09352 216 favrELAKVAREALEAAGltpEDI--------DWLvpHQanlriidaTA--------KKLGLPMEKVVVTVDKYGNTSAA 279
|
330 340 350
....*....|....*....|....*....|....*....
gi 1817702832 302 SLPLQLVKAREADRVEAGDTVAMLGVASGLSFGLALVRW 340
Cdd:PRK09352 280 SIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318
|
|
| init_cond_enzymes |
cd00827 |
"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, ... |
7-338 |
5.52e-33 |
|
"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Pssm-ID: 238423 [Multi-domain] Cd Length: 324 Bit Score: 124.47 E-value: 5.52e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 7 ARIAAVTAHLPTRYRTMDEIREkiaksgeyAPPPGLLEDLTGVRGVHVRGDGEDASDLATAAARAALDEAGLRIGDIDLL 86
Cdd:cd00827 2 VGIEAIGAYLPRYRVDNEELAE--------GLGVDPGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 87 LFAATAADLIEPATSHLVAAKMGAT-CPVFDVKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVTRWNVPdrqal 165
Cdd:cd00827 74 IVATESPIDKGKSAATYLAELLGLTnAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSA----- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 166 lralPGYTASDAGAAMVLTAGPaGEDGPGI-------TAMRFVSNSAAWEACTVSGGGTMHQRSVHDDHTTlrlnGDLRQ 238
Cdd:cd00827 149 ----LEPTLGDGAAAMLVSRNP-GILAAGIvsthstsDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAG----RAVFE 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 239 GLLDILPDALAVAGDELAAARAGAFVAFHQIAMPQYRQ-----MLDLFSLPESVCLPAVAEHGNCAAASLPLQLVKAREA 313
Cdd:cd00827 220 AAHKLIAKVVRKALDRAGLSEDIDYFVPHQPNGKKILEavakkLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLES 299
|
330 340
....*....|....*....|....*
gi 1817702832 314 DRVEAGDTVAMLGVASGLSFGLALV 338
Cdd:cd00827 300 GKLKAGDRVLLFSYGSGFTAEAFVL 324
|
|
| PRK12879 |
PRK12879 |
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed |
4-340 |
6.68e-32 |
|
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Pssm-ID: 237245 [Multi-domain] Cd Length: 325 Bit Score: 121.51 E-value: 6.68e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 4 PARARIAAVTAHLPTRYRTMDEIREKIAKSGEYapppglLEDLTGVRGVHVRGDGEDASDLATAAARAALDEAGLRIGDI 83
Cdd:PRK12879 2 MSYARITGIGTYVPPRVLTNDDLETFIDTSDEW------IVQRTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 84 DLLLFAATAADLIEPATSHLVAAKMGA-TCPVFDVKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVTRWNvpDR 162
Cdd:PRK12879 76 DLIIVATTTPDYLFPSTASQVQARLGIpNAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVTDYT--DR 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 163 QallralpgyTA---SDAGAAMVLTagpAGEDGPGITAMRFVSNSAAWEACTVSGGGTMHQRSVHDDHTTLRLNG----- 234
Cdd:PRK12879 154 T---------TCilfGDGAGAVVLE---ATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGrevfk 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 235 DLRQGLLDILPDALAVAG---DELAAARAgafvafHQIAMPQYRQMLDLFSLPESVCLPAVAEHGNCAAASLPLQLVKAR 311
Cdd:PRK12879 222 WAVRTMPKGARQVLEKAGltkDDIDWVIP------HQANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLAL 295
|
330 340
....*....|....*....|....*....
gi 1817702832 312 EADRVEAGDTVAMLGVASGLSFGLALVRW 340
Cdd:PRK12879 296 EQGKIKPGDTLLLYGFGAGLTWAALLVKW 324
|
|
| PRK07204 |
PRK07204 |
beta-ketoacyl-ACP synthase III; |
7-334 |
3.02e-23 |
|
beta-ketoacyl-ACP synthase III;
Pssm-ID: 235964 Cd Length: 329 Bit Score: 98.37 E-value: 3.02e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 7 ARIAAVTAHLPTRYRTMDEIREKIAKsgeyapPPGLLEDLTGVRGVHVrGDGEDASDLATAAARAALDEAGLRIGDIDLL 86
Cdd:PRK07204 5 ISIKGIGTYLPKRKVDSLELDKKLDL------PEGWVLKKSGVKTRHF-VDGETSSYMGAEAAKKAVEDAKLTLDDIDCI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 87 LFAATAADLIEPATSHLVAAKMG---ATCPVFDVKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVTRWNVPDRQ 163
Cdd:PRK07204 78 ICASGTIQQAIPCTASLIQEQLGlqhSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGLNWGQNESC 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 164 ALLralpgytaSDAGAAMVLTAGpagEDGPGITAMRFVSNSAAWEACTVSGGGTM-HQRSVHDDH-----------TTLR 231
Cdd:PRK07204 158 ILF--------GDGAAAVVITKG---DHSSRILASHMETYSSGAHLSEIRGGGTMiHPREYSEERkedflfdmngrAIFK 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 232 LNGDLRQGLLDILpdaLAVAGDELAAARAGAFvafHQIAMPQYRQMLDLFSLPESVCLPAVAEHGNCAAASLPLQLVKAR 311
Cdd:PRK07204 227 LSSKYLMKFIDKL---LMDAGYTLADIDLIVP---HQASGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAI 300
|
330 340
....*....|....*....|...
gi 1817702832 312 EADRVEAGDTVAMLGVASGLSFG 334
Cdd:PRK07204 301 KQKKVQRGNKILLLGTSAGLSIG 323
|
|
| PLN02326 |
PLN02326 |
3-oxoacyl-[acyl-carrier-protein] synthase III |
4-340 |
2.13e-21 |
|
3-oxoacyl-[acyl-carrier-protein] synthase III
Pssm-ID: 215185 Cd Length: 379 Bit Score: 93.65 E-value: 2.13e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 4 PARARIAAVTAHLPTRYRTMDEIREKIAKSGEYAPPPglledlTGVRGVHVRGDGEDASDLATAAARAALDEAGLRIGDI 83
Cdd:PLN02326 45 GSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATR------TGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDV 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 84 DLLLFA-ATAADLIEPATShlVAAKMGATCPV-FDVKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVTRWNvpD 161
Cdd:PLN02326 119 DLVLLCtSSPDDLFGSAPQ--VQAALGCTNALaFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYVDWT--D 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 162 RQALLraLPGytasDAGAAMVLTAGPAGE----------DGPGITAMRFVSNSAAWEACTVSGGGTMHQRSVHDDHTTLR 231
Cdd:PLN02326 195 RGTCI--LFG----DGAGAVVLQACDDDEdgllgfdmhsDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQ 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 232 LNG-DLRQGLLDILPD----ALAVAG------DELaaaragafvAFHQIAMPQYRQMLDLFSLPESVCLPAVAEHGNCAA 300
Cdd:PLN02326 269 MNGkEVFKFAVRCVPQviesALQKAGltaesiDWL---------LLHQANQRIIDAVAQRLGIPPEKVISNLANYGNTSA 339
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1817702832 301 ASLPLQLVKAREADRVEAGDTVAMLGVASGLSFGLALVRW 340
Cdd:PLN02326 340 ASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379
|
|
| PRK05963 |
PRK05963 |
beta-ketoacyl-ACP synthase III; |
8-340 |
1.17e-18 |
|
beta-ketoacyl-ACP synthase III;
Pssm-ID: 180328 [Multi-domain] Cd Length: 326 Bit Score: 85.16 E-value: 1.17e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 8 RIAAVTAHLPTRYRTMDEIREKIAKSgeyappPGLLEDLTGVRGVHVRGDGEDASDLATAAARAALDEAGLRIGDIDLLL 87
Cdd:PRK05963 5 RIAGFGHAVPDRRVENAEIEAQLGLE------TGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 88 FAATAADLIEPATSHLVAAKMG-ATCPVFDVKNACNSVLNAMETAASFIETGRyRTVLIVCGETgsLVTRWNVPDR-QAL 165
Cdd:PRK05963 79 LATSTPDHLLPPSAPLLAHRLGlQNSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANI--LSRRINMAERaSAV 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 166 LRAlpgytasDAGAAMVLtaGPAGEDGPGITAMRFVSNSAAWEACTVSGGGT----MHQRSVHDDHTTLRLNGDLRQGLL 241
Cdd:PRK05963 156 LFA-------DAAGAVVL--APSAKANSGVLGSQLISDGSHYDLIKIPAGGSarpfAPERDASEFLMTMQDGRAVFTEAV 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 242 DILP----DALAVAGdelaaARAGAFVAF--HQIAMPQYRQMLDLFSLPESVCLPAVAEHGNCAAASLPLQLVKAREADR 315
Cdd:PRK05963 227 RMMSgasqNVLASAA-----MTPQDIDRFfpHQANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANLEQP 301
|
330 340
....*....|....*....|....*
gi 1817702832 316 VEAGDTVAMLGVASGLSFGLALVRW 340
Cdd:PRK05963 302 LREGERLLFAAAGAGMTGGAVVMRV 326
|
|
| fabH |
CHL00203 |
3-oxoacyl-acyl-carrier-protein synthase 3; Provisional |
47-340 |
1.62e-17 |
|
3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Pssm-ID: 164577 [Multi-domain] Cd Length: 326 Bit Score: 81.91 E-value: 1.62e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 47 TGVRGVHVRGDGEDASDLATAAARAALDEAGLRIGDIDLLLFA-ATAADLIEPATShlVAAKMGATCPV-FDVKNACNSV 124
Cdd:CHL00203 37 TGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILAtSTPDDLFGSASQ--LQAEIGATRAVaFDITAACSGF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 125 LNAMETAASFIETGRYRTVLIVCGETGSLVTRWNvpDRQALLRALPGYTASDAGAAMV-----LTAGPAGEDGPGITAMR 199
Cdd:CHL00203 115 ILALVTATQFIQNGSYKNILVVGADTLSKWIDWS--DRKTCILFGDGAGAAIIGASYEnsilgFKLCTDGKLNSHLQLMN 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 200 FVSNSAAWEACTVSGGG----TMHQRSVHdDHTTLRLNGDLRQGLldilpDALAVAGDELaaaragAFVAFHQIAMPQYR 275
Cdd:CHL00203 193 KPVNNQSFGTTKLPQGQyqsiSMNGKEVY-KFAVFQVPAVIIKCL-----NALNISIDEV------DWFILHQANKRILE 260
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1817702832 276 QMLDLFSLPESVCLPAVAEHGNCAAASLPLQLVKAREADRVEAGDTVAMLGVASGLSFGLALVRW 340
Cdd:CHL00203 261 AIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325
|
|
| ACP_syn_III_C |
pfam08541 |
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on ... |
266-340 |
9.84e-14 |
|
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Pssm-ID: 430060 Cd Length: 90 Bit Score: 65.99 E-value: 9.84e-14
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1817702832 266 FHQIAMPQYRQMLDLFSLPESVCLPAVAEHGNCAAASLPLQLVKAREADRVEAGDTVAMLGVASGLSFGLALVRW 340
Cdd:pfam08541 16 PHQANLRIIDAVAKRLGLPPEKVVVNLDEYGNTSAASIPLALDEAVEEGKLKPGDLVLLVGFGAGLTWGAALLRW 90
|
|
| ACP_syn_III |
pfam08545 |
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl- ... |
115-195 |
1.60e-12 |
|
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.
Pssm-ID: 430064 [Multi-domain] Cd Length: 80 Bit Score: 62.15 E-value: 1.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 115 FDVKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVTRWNvpDRQalLRALPGytasDAGAAMVLTAGPagEDGPG 194
Cdd:pfam08545 1 FDINAACSGFVYALSTAAALIRSGRAKNVLVIGAETLSKILDWT--DRS--TAVLFG----DGAGAVVLEATD--EPGAR 70
|
.
gi 1817702832 195 I 195
Cdd:pfam08545 71 I 71
|
|
| PRK06840 |
PRK06840 |
3-oxoacyl-ACP synthase; |
9-340 |
1.04e-10 |
|
3-oxoacyl-ACP synthase;
Pssm-ID: 235872 Cd Length: 339 Bit Score: 61.95 E-value: 1.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 9 IAAVTAHLPTRYRTMDEIREKiakSGeyaPPPGLLEDLTGVRGVHVRGDGEDASDLATAAARAALDEAGLRIGDIDLLL- 87
Cdd:PRK06840 7 IVGTGVYLPKDVMTAEEIAEK---TG---IPEEVVIEKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIy 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 88 FAATAADLIEPATSHLVAAKMGAT-CPVFDVKNACNSVLNAMETAAS-FIETGRYRTVLIVCGETGSLVTRWNVPDRQAL 165
Cdd:PRK06840 81 IGSEHKDYPVWSSAPKIQHEIGAKnAWAFDIMAVCASFPIALKVAKDlLYSDPSIENVLLVGGYRNSDLVDYDNPRTRFM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 166 lralpgYTASDAGAAMVLTAGPAGEDgpgITAMRFVSNSAAWEACTVSGGGTMHQRSVHD-----------DHTTL--RL 232
Cdd:PRK06840 161 ------FNFAAGGSAALLKKDAGKNR---ILGSAIITDGSFSEDVRVPAGGTKQPASPETvenrqhyldviDPESMkeRL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 233 NGDLRQGLLDILPDALAVAGDELAAARAGAFVAFHQIAmpqYRQMLDLFSLPESVCLpAVAEHGNCAAASLPLQLVKARE 312
Cdd:PRK06840 232 DEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSA---HIALLEGLGLTEEQAI-YLDEYGHLGQLDQILSLHLALE 307
|
330 340
....*....|....*....|....*...
gi 1817702832 313 ADRVEAGDTVAMLGVASGLSFGLALVRW 340
Cdd:PRK06840 308 QGKLKDGDLVVLVSAGTGYTWAATVIRW 335
|
|
| SCP-x_thiolase |
cd00829 |
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; ... |
53-160 |
7.84e-06 |
|
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Pssm-ID: 238425 [Multi-domain] Cd Length: 375 Bit Score: 47.26 E-value: 7.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 53 HVRGDGEDASDLATAAARAALDEAGLRIGDIDLLLFAATAADLIEPATSHLVAAKMGAT-CPVFDVKNACNSVLNAMETA 131
Cdd:cd00829 8 FGRRSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLgKPATRVEAAGASGSAAVRAA 87
|
90 100
....*....|....*....|....*....
gi 1817702832 132 ASFIETGRYRTVLIVCGETGSLVTRWNVP 160
Cdd:cd00829 88 AAAIASGLADVVLVVGAEKMSDVPTGDEA 116
|
|
| PRK07515 |
PRK07515 |
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed |
73-163 |
3.30e-05 |
|
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Pssm-ID: 236037 Cd Length: 372 Bit Score: 45.25 E-value: 3.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 73 LDEAGLRIGDIDLLLFAATAADLIEPATSHLVAAKMGATCPVFDVKNACNSVLNAMETAASFIETGRYRTVLIVCGE--T 150
Cdd:PRK07515 107 LARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEicS 186
|
90
....*....|...
gi 1817702832 151 GSLVTRwnvpDRQ 163
Cdd:PRK07515 187 GHLNFR----DRD 195
|
|
| PksG |
COG3425 |
3-hydroxy-3-methylglutaryl CoA synthase [Lipid transport and metabolism]; ... |
73-188 |
2.13e-04 |
|
3-hydroxy-3-methylglutaryl CoA synthase [Lipid transport and metabolism]; 3-hydroxy-3-methylglutaryl CoA synthase is part of the Pathway/BioSystem: Isoprenoid biosynthesis
Pssm-ID: 442651 [Multi-domain] Cd Length: 382 Bit Score: 42.86 E-value: 2.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 73 LDEAGLRIGDIDLLLFAataadliepATSHLVAAKMGAT-----------CPVFDVKNACNSVLNAMETAASFIETGRYR 141
Cdd:COG3425 63 LDRAGIDPSDIGAVYVG---------TESGPDASKPIATyvhgalglppnCRAFELKFACYAGTAALQAALGWVASGPNK 133
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1817702832 142 TVLIVC-----GETGSlvtrwnvpdrqallralPG-YTASDAGAAMVLTAGPA 188
Cdd:COG3425 134 KALVIAsdiarYGPGS-----------------AGeYTQGAGAVAMLVGADPR 169
|
|
| PRK12880 |
PRK12880 |
beta-ketoacyl-ACP synthase III; |
6-152 |
7.77e-04 |
|
beta-ketoacyl-ACP synthase III;
Pssm-ID: 171793 Cd Length: 353 Bit Score: 40.72 E-value: 7.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 6 RARIAAVTAHLPTRYRTMDEIREKIAKSGEyapppGLLEDLTGVRGVHVR---GDGEDASDLATAAARAALDEAGLRIGD 82
Cdd:PRK12880 7 KAKISGICVSVPEHKICIDDELESVFSNDI-----KTLKRMKKVIGLNTRyicDENTCVSDLGKHAANTLLQGLNIDKNS 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1817702832 83 IDLLLFAATAADLIEPATSHLVAAKMG--ATCPVFDVKNACNSVLNAMETAASFIETGRYRtVLIVCGETGS 152
Cdd:PRK12880 82 LDALIVVTQSPDFFMPSTACYLHQLLNlsSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLS 152
|
|
| cond_enzymes |
cd00327 |
Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) ... |
56-149 |
1.01e-03 |
|
Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Pssm-ID: 238201 [Multi-domain] Cd Length: 254 Bit Score: 40.12 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 56 GDGEDASDLATAAARAALDEAGLRIGDIDLLLFAATAADLIEPATSHLVAAKMG-ATCPVFDVKNACNSVLNAMETAASF 134
Cdd:cd00327 2 GLGITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGiSGGPAYSVNQACATGLTALALAVQQ 81
|
90
....*....|....*
gi 1817702832 135 IETGRYRTVLIVCGE 149
Cdd:cd00327 82 VQNGKADIVLAGGSE 96
|
|
| CHS_like |
cd00831 |
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, ... |
18-337 |
1.11e-03 |
|
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Pssm-ID: 238427 [Multi-domain] Cd Length: 361 Bit Score: 40.29 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 18 TRYRTMDEIREkiaksgEYAPPPGLLEDLTGVRGVHVrgdgEDASDLATAAARAALDEAGLRIGDIDLLLFaATAADLIE 97
Cdd:cd00831 52 TRYLVLPGGEE------TYAPRPEMSPSLDERNDIAL----EEARELAEEAARGALDEAGLRPSDIDHLVV-NTSTGNPT 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 98 PATSHLVAAKMG-----ATCPVFdvKNACNSVLNAMETAASFIETGRYRTVLIVCGETGSLVTRWnvPDRQALL--RALP 170
Cdd:cd00831 121 PSLDAMLINRLGlrpdvKRYNLG--GMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLWYRG--PDHRSMLvgNALF 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 171 GytasDAGAAMVLTAGPAGEDG-PGITAMRfvsnsAAWEACTVSGGGTMHqRSVHDDHTTLRLNGDL----RQGLLDILP 245
Cdd:cd00831 197 G----DGAAAVLLSNDPRDRRReRPLFELV-----RAASTLLPDSEDAMG-WHLGEEGLTFVLSRDVprlvEKNLERVLR 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 246 DALAVAGDELAAARAGafvafHQIAMPQYRQMLD----LFSLPESVCLPA---VAEHGNCAAASLPLQLVKAREADRVEA 318
Cdd:cd00831 267 KLLARLGIGLFKLAFD-----HWCVHPGGRAVLDavekALGLSPEDLEASrmvLRRYGNMSSSSVLYVLAYMEAKGRVKR 341
|
330
....*....|....*....
gi 1817702832 319 GDTVAMLGVASGLSFGLAL 337
Cdd:cd00831 342 GDRGLLIAFGPGFTCESAV 360
|
|
| decarbox_cond_enzymes |
cd00825 |
decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new ... |
98-317 |
7.51e-03 |
|
decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Pssm-ID: 238421 [Multi-domain] Cd Length: 332 Bit Score: 37.62 E-value: 7.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 98 PATSHLVAAKMGATCPVFDVKNACNSVLNAMETAASFIETGRYRTVLIVCGEtgsLVTRWNVPDRQALLRALPGYTASDA 177
Cdd:cd00825 73 PGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSE---ELAAPMDCEFDAMGALSTPEKASRT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1817702832 178 GAAMVLTAGPAgeDGPGITAMRFVSNSAAWEACTVSGGGTMHQrsvHDDHTTLRLNGDLRQGLLDILPDALAVAGdelAA 257
Cdd:cd00825 150 FDAAADGFVFG--DGAGALVVEELEHALARGAHIYAEIVGTAA---TIDGAGMGAFAPSAEGLARAAKEALAVAG---LT 221
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1817702832 258 ARAGAFVAFHQIAMPQYRQMLDLFSLPESVCLPAV-----AEHGNCAAASLPLQLVKAREADRVE 317
Cdd:cd00825 222 VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAvsatkAMTGNLSSAAVVLAVDEAVLMLEHG 286
|
|
| |
