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Conserved domains on  [gi|1819734808|ref|WP_165387516|]
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SLATT domain-containing protein [Vibrio vulnificus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SLATT_4 NF033632
SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally ...
 12-157 2.71e-38

SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally predicted to function as pore-forming effectors in a class of conflict systems which are reliant on the production of second messenger nucleotide or nucleotide derivatives. SLATT domains are predicted to initiate cell suicide responses upon their activation. This SLATT family is often coupled to the SMODS nucleotide synthetase and is sometimes further embedded in other conflict systems like CRISPR/Cas or R-M systems.


:

Pssm-ID: 468118  Cd Length: 154  Bit Score: 128.17  E-value: 2.71e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819734808  12 EAKRIEEDALYSSKGHYNCADNWKSVHYWIGIPAAILAGVASVSAFSENTA-------AAGYISVLVAILSALSTFLDPN 84
Cdd:NF033632    1 ELREWYERVLYTHKAHEKAADRLRKYHLWLGIPSIILSALTGTGVFASLGDeiwakklITGVLSLLAAILTALQTFLNPS 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1819734808  85 ARQNSHKSSGAAFGTLKNQARR-FYEIEvHLELDEKKLKKQLDALFLRRDELNTTSFSISASAYRKAKTDIESG 157
Cdd:NF033632   81 ERAEKHRSAANRYLALREKYLSlLLDIK-DGAISDEELRERRDELREELDELYSDAPPTPSKAYKKAQKALKIG 153
 
Name Accession Description Interval E-value
SLATT_4 NF033632
SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally ...
 12-157 2.71e-38

SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally predicted to function as pore-forming effectors in a class of conflict systems which are reliant on the production of second messenger nucleotide or nucleotide derivatives. SLATT domains are predicted to initiate cell suicide responses upon their activation. This SLATT family is often coupled to the SMODS nucleotide synthetase and is sometimes further embedded in other conflict systems like CRISPR/Cas or R-M systems.


Pssm-ID: 468118  Cd Length: 154  Bit Score: 128.17  E-value: 2.71e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819734808  12 EAKRIEEDALYSSKGHYNCADNWKSVHYWIGIPAAILAGVASVSAFSENTA-------AAGYISVLVAILSALSTFLDPN 84
Cdd:NF033632    1 ELREWYERVLYTHKAHEKAADRLRKYHLWLGIPSIILSALTGTGVFASLGDeiwakklITGVLSLLAAILTALQTFLNPS 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1819734808  85 ARQNSHKSSGAAFGTLKNQARR-FYEIEvHLELDEKKLKKQLDALFLRRDELNTTSFSISASAYRKAKTDIESG 157
Cdd:NF033632   81 ERAEKHRSAANRYLALREKYLSlLLDIK-DGAISDEELRERRDELREELDELYSDAPPTPSKAYKKAQKALKIG 153
 
Name Accession Description Interval E-value
SLATT_4 NF033632
SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally ...
 12-157 2.71e-38

SLATT domain; The SLATT domain contains two transmembrane helices. SLATT domains are generally predicted to function as pore-forming effectors in a class of conflict systems which are reliant on the production of second messenger nucleotide or nucleotide derivatives. SLATT domains are predicted to initiate cell suicide responses upon their activation. This SLATT family is often coupled to the SMODS nucleotide synthetase and is sometimes further embedded in other conflict systems like CRISPR/Cas or R-M systems.


Pssm-ID: 468118  Cd Length: 154  Bit Score: 128.17  E-value: 2.71e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1819734808  12 EAKRIEEDALYSSKGHYNCADNWKSVHYWIGIPAAILAGVASVSAFSENTA-------AAGYISVLVAILSALSTFLDPN 84
Cdd:NF033632    1 ELREWYERVLYTHKAHEKAADRLRKYHLWLGIPSIILSALTGTGVFASLGDeiwakklITGVLSLLAAILTALQTFLNPS 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1819734808  85 ARQNSHKSSGAAFGTLKNQARR-FYEIEvHLELDEKKLKKQLDALFLRRDELNTTSFSISASAYRKAKTDIESG 157
Cdd:NF033632   81 ERAEKHRSAANRYLALREKYLSlLLDIK-DGAISDEELRERRDELREELDELYSDAPPTPSKAYKKAQKALKIG 153
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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