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Conserved domains on  [gi|1867502393|ref|WP_178632950|]
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MULTISPECIES: PrgI family protein [Bacillati]

Protein Classification

PrgI family protein( domain architecture ID 10577141)

uncharacterized PrgI family protein that may be a part of a Type IV secretion system

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PrgI pfam12666
PrgI family protein; This family of proteins is functionally uncharacterized. This family of ...
 4-95 1.70e-34

PrgI family protein; This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 116 and 146 amino acids in length. This protein is found in an operon that is part of a Type IV secretion system.


:

Pssm-ID: 432707  Cd Length: 91  Bit Score: 114.63  E-value: 1.70e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1867502393   4 KINREIRNYTESMFFGLSLRQFIFSVLACGVAVGLYFLLRPYVgTETVSWVCILGAAPFAALGFVKYNGMTAEKAIYAWI 83
Cdd:pfam12666   1 RIPKDISKYEDKVFFGLTKRQLICLGLAALVAVGLYFLLRGFL-TETASWLMILVAVPFAALGFYKKDGLPLEKYLKAAI 79

                          90
                  ....*....|..
gi 1867502393  84 KAEFLMPKKLVF 95
Cdd:pfam12666  80 KSKFLRPKKRVY 91
 
Name Accession Description Interval E-value
PrgI pfam12666
PrgI family protein; This family of proteins is functionally uncharacterized. This family of ...
 4-95 1.70e-34

PrgI family protein; This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 116 and 146 amino acids in length. This protein is found in an operon that is part of a Type IV secretion system.


Pssm-ID: 432707  Cd Length: 91  Bit Score: 114.63  E-value: 1.70e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1867502393   4 KINREIRNYTESMFFGLSLRQFIFSVLACGVAVGLYFLLRPYVgTETVSWVCILGAAPFAALGFVKYNGMTAEKAIYAWI 83
Cdd:pfam12666   1 RIPKDISKYEDKVFFGLTKRQLICLGLAALVAVGLYFLLRGFL-TETASWLMILVAVPFAALGFYKKDGLPLEKYLKAAI 79

                          90
                  ....*....|..
gi 1867502393  84 KAEFLMPKKLVF 95
Cdd:pfam12666  80 KSKFLRPKKRVY 91
 
Name Accession Description Interval E-value
PrgI pfam12666
PrgI family protein; This family of proteins is functionally uncharacterized. This family of ...
 4-95 1.70e-34

PrgI family protein; This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 116 and 146 amino acids in length. This protein is found in an operon that is part of a Type IV secretion system.


Pssm-ID: 432707  Cd Length: 91  Bit Score: 114.63  E-value: 1.70e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1867502393   4 KINREIRNYTESMFFGLSLRQFIFSVLACGVAVGLYFLLRPYVgTETVSWVCILGAAPFAALGFVKYNGMTAEKAIYAWI 83
Cdd:pfam12666   1 RIPKDISKYEDKVFFGLTKRQLICLGLAALVAVGLYFLLRGFL-TETASWLMILVAVPFAALGFYKKDGLPLEKYLKAAI 79

                          90
                  ....*....|..
gi 1867502393  84 KAEFLMPKKLVF 95
Cdd:pfam12666  80 KSKFLRPKKRVY 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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