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Conserved domains on  [gi|1891589370|ref|WP_183821347|]
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proline racemase family protein [Aliirhizobium cellulosilyticum]

Protein Classification

proline racemase family protein( domain architecture ID 11467630)

proline racemase family protein similar to trans-3-hydroxy-L-proline (t3LHyp) dehydratase (aka 4-hydroxyproline 2-epimerase) that catalyzes the dehydration of t3LHyp to delta(1)-pyrroline-2-carboxylate (Pyr2C), and the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PrdF COG3938
Proline racemase/hydroxyproline epimerase [Amino acid transport and metabolism];
1-336 0e+00

Proline racemase/hydroxyproline epimerase [Amino acid transport and metabolism];


:

Pssm-ID: 443139  Cd Length: 335  Bit Score: 513.88  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370   1 MRSSKIIHIVTCHAEGEVGDVIVGGVAPPPGDTVWEQSRFIAKD-QTLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWI 79
Cdd:COG3938     1 MRSSRTITTIDAHTEGEPTRVVTGGVPPLPGNTMLEKRRYFAENyDWLRRLLMFEPRGHADMSGALLVPPTRPDADFGVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370  80 IMEPEDTPPMSGSNSICVATVLLDSGIIPMTEPITKMVLEAPAGLVEVEAECANGKAERITVTNVKSFAQKLDASLDVPG 159
Cdd:COG3938    81 FMETSGYLPMCGHGTIGVATVLLETGLVPMTEPVTEVVLDTPAGLVRARAEVEDGKVESVTFENVPSFVYALDVEVEVPG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 160 LGTITVDTAYGGDSFVVVDPDEIGIDLIPENARLIAETGIRITNEANRQLGFSHPEDTGWNHISFCLFAGKAYHEDgqLT 239
Cdd:COG3938   161 LGTVTVDIAYGGNFYAIVDAQQLGLDLEPENARELIRLGLEIRDAANEQLEVVHPENPDINGVSHVEFTGPPTDPD--AD 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 240 AKSVVAIQPGKIDRSPTGTAVSARMALLHARGQMKEGETFTGISIIGTRFVGKIVRETEIAGNKAIIPSITGRAWISGTS 319
Cdd:COG3938   239 ARNAVVFGPGAIDRSPCGTGTSARMALLHARGELKVGETFVHESIIGSRFTGRILEETTVGGYPAIIPEITGRAWITGFN 318

                         330
                  ....*....|....*..
gi 1891589370 320 QLMLDPSDPFPGGYKLS 336
Cdd:COG3938   319 QFVLDPDDPLPEGFLLR 335
 
Name Accession Description Interval E-value
PrdF COG3938
Proline racemase/hydroxyproline epimerase [Amino acid transport and metabolism];
1-336 0e+00

Proline racemase/hydroxyproline epimerase [Amino acid transport and metabolism];


Pssm-ID: 443139  Cd Length: 335  Bit Score: 513.88  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370   1 MRSSKIIHIVTCHAEGEVGDVIVGGVAPPPGDTVWEQSRFIAKD-QTLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWI 79
Cdd:COG3938     1 MRSSRTITTIDAHTEGEPTRVVTGGVPPLPGNTMLEKRRYFAENyDWLRRLLMFEPRGHADMSGALLVPPTRPDADFGVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370  80 IMEPEDTPPMSGSNSICVATVLLDSGIIPMTEPITKMVLEAPAGLVEVEAECANGKAERITVTNVKSFAQKLDASLDVPG 159
Cdd:COG3938    81 FMETSGYLPMCGHGTIGVATVLLETGLVPMTEPVTEVVLDTPAGLVRARAEVEDGKVESVTFENVPSFVYALDVEVEVPG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 160 LGTITVDTAYGGDSFVVVDPDEIGIDLIPENARLIAETGIRITNEANRQLGFSHPEDTGWNHISFCLFAGKAYHEDgqLT 239
Cdd:COG3938   161 LGTVTVDIAYGGNFYAIVDAQQLGLDLEPENARELIRLGLEIRDAANEQLEVVHPENPDINGVSHVEFTGPPTDPD--AD 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 240 AKSVVAIQPGKIDRSPTGTAVSARMALLHARGQMKEGETFTGISIIGTRFVGKIVRETEIAGNKAIIPSITGRAWISGTS 319
Cdd:COG3938   239 ARNAVVFGPGAIDRSPCGTGTSARMALLHARGELKVGETFVHESIIGSRFTGRILEETTVGGYPAIIPEITGRAWITGFN 318

                         330
                  ....*....|....*..
gi 1891589370 320 QLMLDPSDPFPGGYKLS 336
Cdd:COG3938   319 QFVLDPDDPLPEGFLLR 335
Pro_racemase pfam05544
Proline racemase; This family consists of proline racemase (EC 5.1.1.4) proteins which ...
 9-333 6.92e-174

Proline racemase; This family consists of proline racemase (EC 5.1.1.4) proteins which catalyze the interconversion of L- and D-proline in bacteria. This family also contains several similar eukaryotic proteins including Swiss:Q9NCP4 a sequence with B-cell mitogenic properties which has been characterized as a co-factor-independent proline racemase.


Pssm-ID: 398923  Cd Length: 325  Bit Score: 485.65  E-value: 6.92e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370   9 IVTCHAEGEVGDVIVGGVAPPPGDTVWEQSRFIAKD-QTLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWIIMEPEDTP 87
Cdd:pfam05544   1 VVDSHTEGEPGRVVVGGVPPLPGATMAEKRRYFARDhDHLRRFLMFEPRGHDMMSGALLVPPKRPDADAGVIFMEPSGYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370  88 PMSGSNSICVATVLLDSGIIPMTEPITKMVLEAPAGLVEVEAECANGKAERITVTNVKSFAQKLDASLDVPGLGTITVDT 167
Cdd:pfam05544  81 PMCGHNTIGVVTVLLETGIVPPQEPETRLNLETPAGLVEARAECRDGKVERVSLRNVPSFVYALDVEVEVPGLGRVRVDI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 168 AYGGDSFVVVDPDEIGIDLIPENARLIAETGIRITNEANRQLGFSHPEDTGWNHISFCLFAGKAYHEDGqlTAKSVVAIQ 247
Cdd:pfam05544 161 AYGGNFYAIVDAEQLGFDIEPAEARELVAAGEKIRDALNEQLKVVHPENPDIRGVSHVQLTGPPTRAEA--HARNAVIIG 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 248 PGKIDRSPTGTAVSARMALLHARGQMKEGETFTGISIIGTRFVGKIVRETEIAGNKAIIPSITGRAWISGTSQLMLDPSD 327
Cdd:pfam05544 239 PGAIDRSPCGTGTSARMAQLHAKGKLKVGETFVHESIIGSEFEGRVEGETEVGGRPAIVPSISGRAWITGTNQLLLDPSD 318


                  ....*.
gi 1891589370 328 PFPGGY 333
Cdd:pfam05544 319 PFAHGF 324
PRK13969 PRK13969
proline racemase; Provisional
 1-335 1.37e-88

proline racemase; Provisional


Pssm-ID: 184427 [Multi-domain]  Cd Length: 334  Bit Score: 269.42  E-value: 1.37e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370   1 MRSSKIIHIVTCHAEGEVGDVIVGGVAPPPGDTVWEQSRFIAKD-QTLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWI 79
Cdd:PRK13969    1 MRFSKSIQTIDSHTMGEPTRIVVGGLPKIPGKTMAEKKEYLEENnDSLRTALMSEPRGHNDMFGSIYTEPADETADFGII 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370  80 IMEPEDTPPMSGSNSICVATVLLDSGIIPMTEPITKMVLEAPAGLVEVEAECANGKAERITVTNVKSFAQKLDASLDVPG 159
Cdd:PRK13969   81 FMDGGGYLNMCGHGSIGAATCAVETGIVKVEEPYTHIKLEAPAGMINARVKVEDGKAKEVSIVNVPAFLYKKDVEIDVPD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 160 LGTITVDTAYGGDSFVVVDPDEIGIDLIPENARLIAETGIRITNEANRQLGFSHPEDTGWNHISFCLFAGKAYHEDGQLt 239
Cdd:PRK13969  161 YGKVTLDISFGGSFFAIVDAEQLGIKISPANSQKLNDLGMKIRHAVNEQIEIKHPVLEHIKTVDLVEIYDEAKHPDADY- 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 240 aKSVVAIQPGKIDRSPTGTAVSARMALLHARGQMKEGETFTGISIIGTRFVGKIVRETEIAGNKAIIPSITGRAWISGTS 319
Cdd:PRK13969  240 -KNVVIFGQGQVDRSPCGTGTSAKMATLYAKGKLKVGEEFVYESIIGTKFKGKILEETKVGEYDAIIPEITGSAYITGFN 318

                         330
                  ....*....|....*.
gi 1891589370 320 QLMLDPSDPFPGGYKL 335
Cdd:PRK13969  319 QFVIDEEDPVKYGFVL 334
 
Name Accession Description Interval E-value
PrdF COG3938
Proline racemase/hydroxyproline epimerase [Amino acid transport and metabolism];
1-336 0e+00

Proline racemase/hydroxyproline epimerase [Amino acid transport and metabolism];


Pssm-ID: 443139  Cd Length: 335  Bit Score: 513.88  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370   1 MRSSKIIHIVTCHAEGEVGDVIVGGVAPPPGDTVWEQSRFIAKD-QTLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWI 79
Cdd:COG3938     1 MRSSRTITTIDAHTEGEPTRVVTGGVPPLPGNTMLEKRRYFAENyDWLRRLLMFEPRGHADMSGALLVPPTRPDADFGVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370  80 IMEPEDTPPMSGSNSICVATVLLDSGIIPMTEPITKMVLEAPAGLVEVEAECANGKAERITVTNVKSFAQKLDASLDVPG 159
Cdd:COG3938    81 FMETSGYLPMCGHGTIGVATVLLETGLVPMTEPVTEVVLDTPAGLVRARAEVEDGKVESVTFENVPSFVYALDVEVEVPG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 160 LGTITVDTAYGGDSFVVVDPDEIGIDLIPENARLIAETGIRITNEANRQLGFSHPEDTGWNHISFCLFAGKAYHEDgqLT 239
Cdd:COG3938   161 LGTVTVDIAYGGNFYAIVDAQQLGLDLEPENARELIRLGLEIRDAANEQLEVVHPENPDINGVSHVEFTGPPTDPD--AD 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 240 AKSVVAIQPGKIDRSPTGTAVSARMALLHARGQMKEGETFTGISIIGTRFVGKIVRETEIAGNKAIIPSITGRAWISGTS 319
Cdd:COG3938   239 ARNAVVFGPGAIDRSPCGTGTSARMALLHARGELKVGETFVHESIIGSRFTGRILEETTVGGYPAIIPEITGRAWITGFN 318

                         330
                  ....*....|....*..
gi 1891589370 320 QLMLDPSDPFPGGYKLS 336
Cdd:COG3938   319 QFVLDPDDPLPEGFLLR 335
Pro_racemase pfam05544
Proline racemase; This family consists of proline racemase (EC 5.1.1.4) proteins which ...
 9-333 6.92e-174

Proline racemase; This family consists of proline racemase (EC 5.1.1.4) proteins which catalyze the interconversion of L- and D-proline in bacteria. This family also contains several similar eukaryotic proteins including Swiss:Q9NCP4 a sequence with B-cell mitogenic properties which has been characterized as a co-factor-independent proline racemase.


Pssm-ID: 398923  Cd Length: 325  Bit Score: 485.65  E-value: 6.92e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370   9 IVTCHAEGEVGDVIVGGVAPPPGDTVWEQSRFIAKD-QTLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWIIMEPEDTP 87
Cdd:pfam05544   1 VVDSHTEGEPGRVVVGGVPPLPGATMAEKRRYFARDhDHLRRFLMFEPRGHDMMSGALLVPPKRPDADAGVIFMEPSGYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370  88 PMSGSNSICVATVLLDSGIIPMTEPITKMVLEAPAGLVEVEAECANGKAERITVTNVKSFAQKLDASLDVPGLGTITVDT 167
Cdd:pfam05544  81 PMCGHNTIGVVTVLLETGIVPPQEPETRLNLETPAGLVEARAECRDGKVERVSLRNVPSFVYALDVEVEVPGLGRVRVDI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 168 AYGGDSFVVVDPDEIGIDLIPENARLIAETGIRITNEANRQLGFSHPEDTGWNHISFCLFAGKAYHEDGqlTAKSVVAIQ 247
Cdd:pfam05544 161 AYGGNFYAIVDAEQLGFDIEPAEARELVAAGEKIRDALNEQLKVVHPENPDIRGVSHVQLTGPPTRAEA--HARNAVIIG 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 248 PGKIDRSPTGTAVSARMALLHARGQMKEGETFTGISIIGTRFVGKIVRETEIAGNKAIIPSITGRAWISGTSQLMLDPSD 327
Cdd:pfam05544 239 PGAIDRSPCGTGTSARMAQLHAKGKLKVGETFVHESIIGSEFEGRVEGETEVGGRPAIVPSISGRAWITGTNQLLLDPSD 318


                  ....*.
gi 1891589370 328 PFPGGY 333
Cdd:pfam05544 319 PFAHGF 324
PRK13969 PRK13969
proline racemase; Provisional
 1-335 1.37e-88

proline racemase; Provisional


Pssm-ID: 184427 [Multi-domain]  Cd Length: 334  Bit Score: 269.42  E-value: 1.37e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370   1 MRSSKIIHIVTCHAEGEVGDVIVGGVAPPPGDTVWEQSRFIAKD-QTLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWI 79
Cdd:PRK13969    1 MRFSKSIQTIDSHTMGEPTRIVVGGLPKIPGKTMAEKKEYLEENnDSLRTALMSEPRGHNDMFGSIYTEPADETADFGII 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370  80 IMEPEDTPPMSGSNSICVATVLLDSGIIPMTEPITKMVLEAPAGLVEVEAECANGKAERITVTNVKSFAQKLDASLDVPG 159
Cdd:PRK13969   81 FMDGGGYLNMCGHGSIGAATCAVETGIVKVEEPYTHIKLEAPAGMINARVKVEDGKAKEVSIVNVPAFLYKKDVEIDVPD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 160 LGTITVDTAYGGDSFVVVDPDEIGIDLIPENARLIAETGIRITNEANRQLGFSHPEDTGWNHISFCLFAGKAYHEDGQLt 239
Cdd:PRK13969  161 YGKVTLDISFGGSFFAIVDAEQLGIKISPANSQKLNDLGMKIRHAVNEQIEIKHPVLEHIKTVDLVEIYDEAKHPDADY- 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 240 aKSVVAIQPGKIDRSPTGTAVSARMALLHARGQMKEGETFTGISIIGTRFVGKIVRETEIAGNKAIIPSITGRAWISGTS 319
Cdd:PRK13969  240 -KNVVIFGQGQVDRSPCGTGTSAKMATLYAKGKLKVGEEFVYESIIGTKFKGKILEETKVGEYDAIIPEITGSAYITGFN 318

                         330
                  ....*....|....*.
gi 1891589370 320 QLMLDPSDPFPGGYKL 335
Cdd:PRK13969  319 QFVIDEEDPVKYGFVL 334
PRK13971 PRK13971
4-hydroxyproline epimerase;
7-335 2.48e-68

4-hydroxyproline epimerase;


Pssm-ID: 184428  Cd Length: 333  Bit Score: 217.13  E-value: 2.48e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370   7 IHIVTC---HAEGEVGDVIVGGVAPPPGDTVWEQ-SRFIAKDQTLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWIIME 82
Cdd:PRK13971    3 RHTFFCidaHTCGNPVRLVAGGGPLLQGATMSEKrAHFLREYDWIRTGLMFEPRGHDMMSGSILYPPTRPDCDFAILFIE 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370  83 PEDTPPMSGSNSICVATVLLDSGIIPMTEPiTKMVLEAPAGLVEVEAECANGKAERITVTNVKSFAQKLDASLDVPGLGT 162
Cdd:PRK13971   83 TSGCLPMCGHGTIGTVTAAIEEGLVTPKTP-GKLRLDTPAGLVDIEYEQDGEKVESVRLTNVPSYLAAEDLEVEIPGLGP 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 163 ITVDTAYGGDSFVVVDPDEIGIDLIPENARLIAETGIRITNEANRQLGFSHPEDTGWNHISFCLFAGKAYHEDGqlTAKS 242
Cdd:PRK13971  162 LKVDVAYGGNFYAIVEPQENFPGLDHYSASDILRWSPVLRQALNEKYEFVHPEDPRIRGVSHVLWTGKPISPGA--DARN 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 243 VVAIQPGKIDRSPTGTAVSARMALLHARGQMKEGETFTGISIIGTRFVGKIVRETEIAGNKAIIPSITGRAWISGTSQLM 322
Cdd:PRK13971  240 AVFYGDKAIDRSPCGTGTSARMAQLAAKGKLKVGDEFVHESIIGSLFEGRVEAAATVGGRPAILPSIEGWARVTGHNTIF 319

                         330
                  ....*....|...
gi 1891589370 323 LDPSDPFPGGYKL 335
Cdd:PRK13971  320 VDDRDPYAHGFQV 332
PRK13970 PRK13970
4-hydroxyproline epimerase;
5-332 2.42e-28

4-hydroxyproline epimerase;


Pssm-ID: 172473  Cd Length: 311  Bit Score: 112.04  E-value: 2.42e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370   5 KIIHIVTCHAEGEVGDVIVGGVAPPPGDTVWEQSRFIAKDQT-LRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWIIMEP 83
Cdd:PRK13970    3 KRIQIIDSHTGGEPTRLVVSGFPSLGGGTMAERRDVLAREHDrYRTACILEPRGSDVLVGALLCEPVSPDAAAGVIFFNN 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370  84 EDTPPMSGSNSICVATVLLDSG-IIPMTEPItkmvlEAPAGlvEVEAECANGKAerITVTNVKSFAQKLDASLDVPGLGT 162
Cdd:PRK13970   83 SGYLGMCGHGTIGVVRTLHHMGrIGPGVHRI-----ETPVG--TVEATLHDDLS--VSVRNVLAYRHAKDVVVDVPGYGP 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 163 ITVDTAYGGDSFVVVDpdEIGIDLIPENARLIA--ETGIRitnEANRQLGFSHPEDTGWNHISfcLFAgkayhEDGQLTA 240
Cdd:PRK13970  154 VKGDIAWGGNWFFLIS--DHGQRVAGDNVAALTayASAVR---AGLERAGITGANGGEIDHIE--LFA-----DDPEHDS 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1891589370 241 KSVVAIQPGKIDRSPTGTAVSARMALLHARGQMKEGETFTGISIIGTRFVGKIVReteiaGNKAIIPSITGRAWISGTSQ 320
Cdd:PRK13970  222 RSFVLCPGHAYDRSPCGTGTSAKLACLAADGKLAPGVVWRQASVIGSVFSASYAA-----AEGGIVPTIRGSAHLSAEAT 296

                         330
                  ....*....|..
gi 1891589370 321 LMLDPSDPFPGG 332
Cdd:PRK13970  297 LLIEDDDPFGWG 308
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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