Rib/alpha-like domain-containing protein, partial [Enterococcus faecalis]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Rib | pfam08428 | Rib domain; The region featured in this family is found repeated in a number of bacterial ... |
32-96 | 5.28e-18 | |||
Rib domain; The region featured in this family is found repeated in a number of bacterial surface proteins, such as Rib and alpha. These are expressed by group B streptococci, and Rib is thought to confer protective immunity. : Pssm-ID: 462474 [Multi-domain] Cd Length: 76 Bit Score: 75.72 E-value: 5.28e-18
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Big_6 | pfam17936 | Bacterial Ig domain; This domain is found in a wide variety of extracellular bacterial ... |
110-189 | 2.94e-15 | |||
Bacterial Ig domain; This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies. : Pssm-ID: 465576 [Multi-domain] Cd Length: 83 Bit Score: 68.81 E-value: 2.94e-15
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rib_alpha super family | cl46943 | Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 ... |
1-40 | 2.19e-11 | |||
Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 amino acids, present in up to 14 copies in a protein and highly identical, even at the DNA level, within each protein. Sequences with these repeats are found in the Rib and alpha surface antigens of group B Streptococcus, Esp of Enterococcus faecalis, and related proteins of Lactobacillus. The repeat lacks Cys residues. Most members of this protein family also have the cell wall anchor motif LPXTG shared by many staphyloccal and streptococcal surface antigens. The actual alignment was detected with superfamily member TIGR02331: Pssm-ID: 131384 [Multi-domain] Cd Length: 80 Bit Score: 58.35 E-value: 2.19e-11
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Name | Accession | Description | Interval | E-value | |||
Rib | pfam08428 | Rib domain; The region featured in this family is found repeated in a number of bacterial ... |
32-96 | 5.28e-18 | |||
Rib domain; The region featured in this family is found repeated in a number of bacterial surface proteins, such as Rib and alpha. These are expressed by group B streptococci, and Rib is thought to confer protective immunity. Pssm-ID: 462474 [Multi-domain] Cd Length: 76 Bit Score: 75.72 E-value: 5.28e-18
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Big_6 | pfam17936 | Bacterial Ig domain; This domain is found in a wide variety of extracellular bacterial ... |
110-189 | 2.94e-15 | |||
Bacterial Ig domain; This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies. Pssm-ID: 465576 [Multi-domain] Cd Length: 83 Bit Score: 68.81 E-value: 2.94e-15
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rib_alpha | TIGR02331 | Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 ... |
1-40 | 2.19e-11 | |||
Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 amino acids, present in up to 14 copies in a protein and highly identical, even at the DNA level, within each protein. Sequences with these repeats are found in the Rib and alpha surface antigens of group B Streptococcus, Esp of Enterococcus faecalis, and related proteins of Lactobacillus. The repeat lacks Cys residues. Most members of this protein family also have the cell wall anchor motif LPXTG shared by many staphyloccal and streptococcal surface antigens. Pssm-ID: 131384 [Multi-domain] Cd Length: 80 Bit Score: 58.35 E-value: 2.19e-11
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rib_alpha | TIGR02331 | Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 ... |
43-96 | 3.65e-09 | |||
Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 amino acids, present in up to 14 copies in a protein and highly identical, even at the DNA level, within each protein. Sequences with these repeats are found in the Rib and alpha surface antigens of group B Streptococcus, Esp of Enterococcus faecalis, and related proteins of Lactobacillus. The repeat lacks Cys residues. Most members of this protein family also have the cell wall anchor motif LPXTG shared by many staphyloccal and streptococcal surface antigens. Pssm-ID: 131384 [Multi-domain] Cd Length: 80 Bit Score: 52.19 E-value: 3.65e-09
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Ig_like_BLP2 | NF040520 | Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus ... |
82-187 | 2.87e-07 | |||
Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus Acinetobacter, resembles the much larger biofilm-associated proteins Bap and Blp1 in N-terminal sequence and the presence of tandem Ig-like repeats. Pssm-ID: 468522 [Multi-domain] Cd Length: 729 Bit Score: 50.81 E-value: 2.87e-07
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Ig_like_BLP2 | NF040520 | Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus ... |
74-188 | 1.65e-06 | |||
Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus Acinetobacter, resembles the much larger biofilm-associated proteins Bap and Blp1 in N-terminal sequence and the presence of tandem Ig-like repeats. Pssm-ID: 468522 [Multi-domain] Cd Length: 729 Bit Score: 48.50 E-value: 1.65e-06
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Rib | pfam08428 | Rib domain; The region featured in this family is found repeated in a number of bacterial ... |
1-28 | 9.70e-05 | |||
Rib domain; The region featured in this family is found repeated in a number of bacterial surface proteins, such as Rib and alpha. These are expressed by group B streptococci, and Rib is thought to confer protective immunity. Pssm-ID: 462474 [Multi-domain] Cd Length: 76 Bit Score: 39.90 E-value: 9.70e-05
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Ig_like_BLP2 | NF040520 | Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus ... |
83-183 | 3.03e-04 | |||
Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus Acinetobacter, resembles the much larger biofilm-associated proteins Bap and Blp1 in N-terminal sequence and the presence of tandem Ig-like repeats. Pssm-ID: 468522 [Multi-domain] Cd Length: 729 Bit Score: 41.56 E-value: 3.03e-04
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Ig_like_BLP2 | NF040520 | Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus ... |
107-187 | 3.62e-04 | |||
Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus Acinetobacter, resembles the much larger biofilm-associated proteins Bap and Blp1 in N-terminal sequence and the presence of tandem Ig-like repeats. Pssm-ID: 468522 [Multi-domain] Cd Length: 729 Bit Score: 41.56 E-value: 3.62e-04
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Name | Accession | Description | Interval | E-value | |||
Rib | pfam08428 | Rib domain; The region featured in this family is found repeated in a number of bacterial ... |
32-96 | 5.28e-18 | |||
Rib domain; The region featured in this family is found repeated in a number of bacterial surface proteins, such as Rib and alpha. These are expressed by group B streptococci, and Rib is thought to confer protective immunity. Pssm-ID: 462474 [Multi-domain] Cd Length: 76 Bit Score: 75.72 E-value: 5.28e-18
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Big_6 | pfam17936 | Bacterial Ig domain; This domain is found in a wide variety of extracellular bacterial ... |
110-189 | 2.94e-15 | |||
Bacterial Ig domain; This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies. Pssm-ID: 465576 [Multi-domain] Cd Length: 83 Bit Score: 68.81 E-value: 2.94e-15
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rib_alpha | TIGR02331 | Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 ... |
1-40 | 2.19e-11 | |||
Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 amino acids, present in up to 14 copies in a protein and highly identical, even at the DNA level, within each protein. Sequences with these repeats are found in the Rib and alpha surface antigens of group B Streptococcus, Esp of Enterococcus faecalis, and related proteins of Lactobacillus. The repeat lacks Cys residues. Most members of this protein family also have the cell wall anchor motif LPXTG shared by many staphyloccal and streptococcal surface antigens. Pssm-ID: 131384 [Multi-domain] Cd Length: 80 Bit Score: 58.35 E-value: 2.19e-11
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rib_alpha | TIGR02331 | Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 ... |
43-96 | 3.65e-09 | |||
Rib/alpha/Esp surface antigen repeat; Sequences in this family are tandem repeats of about 79 amino acids, present in up to 14 copies in a protein and highly identical, even at the DNA level, within each protein. Sequences with these repeats are found in the Rib and alpha surface antigens of group B Streptococcus, Esp of Enterococcus faecalis, and related proteins of Lactobacillus. The repeat lacks Cys residues. Most members of this protein family also have the cell wall anchor motif LPXTG shared by many staphyloccal and streptococcal surface antigens. Pssm-ID: 131384 [Multi-domain] Cd Length: 80 Bit Score: 52.19 E-value: 3.65e-09
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Ig_like_BLP2 | NF040520 | Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus ... |
82-187 | 2.87e-07 | |||
Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus Acinetobacter, resembles the much larger biofilm-associated proteins Bap and Blp1 in N-terminal sequence and the presence of tandem Ig-like repeats. Pssm-ID: 468522 [Multi-domain] Cd Length: 729 Bit Score: 50.81 E-value: 2.87e-07
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Ig_like_BLP2 | NF040520 | Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus ... |
74-188 | 1.65e-06 | |||
Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus Acinetobacter, resembles the much larger biofilm-associated proteins Bap and Blp1 in N-terminal sequence and the presence of tandem Ig-like repeats. Pssm-ID: 468522 [Multi-domain] Cd Length: 729 Bit Score: 48.50 E-value: 1.65e-06
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Rib | pfam08428 | Rib domain; The region featured in this family is found repeated in a number of bacterial ... |
1-28 | 9.70e-05 | |||
Rib domain; The region featured in this family is found repeated in a number of bacterial surface proteins, such as Rib and alpha. These are expressed by group B streptococci, and Rib is thought to confer protective immunity. Pssm-ID: 462474 [Multi-domain] Cd Length: 76 Bit Score: 39.90 E-value: 9.70e-05
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Ig_like_BLP2 | NF040520 | Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus ... |
83-183 | 3.03e-04 | |||
Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus Acinetobacter, resembles the much larger biofilm-associated proteins Bap and Blp1 in N-terminal sequence and the presence of tandem Ig-like repeats. Pssm-ID: 468522 [Multi-domain] Cd Length: 729 Bit Score: 41.56 E-value: 3.03e-04
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Ig_like_BLP2 | NF040520 | Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus ... |
107-187 | 3.62e-04 | |||
Ig-like repeat protein Blp2; Blp2 (BAP-like protein 2), found broadly in the genus Acinetobacter, resembles the much larger biofilm-associated proteins Bap and Blp1 in N-terminal sequence and the presence of tandem Ig-like repeats. Pssm-ID: 468522 [Multi-domain] Cd Length: 729 Bit Score: 41.56 E-value: 3.62e-04
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RibLong | pfam18957 | Long Rib domain; This entry represents the Long Rib domain that is closely related to the ... |
1-27 | 4.02e-03 | |||
Long Rib domain; This entry represents the Long Rib domain that is closely related to the pfam08428 Rib domain but has a conserved insertion. These domains are found in bacterial cell surface proteins. Pssm-ID: 436864 [Multi-domain] Cd Length: 92 Bit Score: 35.75 E-value: 4.02e-03
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Blast search parameters | ||||
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