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Conserved domains on  [gi|1912909279|ref|WP_191802061|]
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MULTISPECIES: phosphate ABC transporter permease PstA [Oerskovia]

Protein Classification

PstA family ABC transporter permease( domain architecture ID 11426443)

PstA family ABC transporter permease is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporters; similar to phosphate transport system permease protein PstA

Gene Ontology:  GO:0140359|GO:0042626|GO:0043190|GO:0016020
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 100-360 4.42e-100

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


:

Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 296.56  E-value: 4.42e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 100 LALIPLVSLLWIVVTRGAKLFGATFLSTDMVGvygDMTSGGIWHAIVGTLLITGAATIISVPIGLLTAIYLVEYGR-GAL 178
Cdd:COG0581     1 LALLPLVWILGTVLVKGLPALSWEFLTSSPSP---GPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARgGRL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 179 ARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGpAYRAGIMGAVALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKW 258
Cdd:COG0581    78 ARLIRFAIDVLAGVPSIVYGLFGYALFVLTLG-LGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKW 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 259 LTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTVGLITQVNWDLFDgRMATLPVFAYRQYEQGG-VGIDRAWAAALT 337
Cdd:COG0581   157 QTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFD-PFATLPVHIYNLASSPYpAAQELAWAAALV 235

                         250       260
                  ....*....|....*....|...
gi 1912909279 338 LILIVMLLNLIARLISRLFSPKT 360
Cdd:COG0581   236 LLLLVLLLNLLARLLRRRFRKKL 258
 
Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 100-360 4.42e-100

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 296.56  E-value: 4.42e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 100 LALIPLVSLLWIVVTRGAKLFGATFLSTDMVGvygDMTSGGIWHAIVGTLLITGAATIISVPIGLLTAIYLVEYGR-GAL 178
Cdd:COG0581     1 LALLPLVWILGTVLVKGLPALSWEFLTSSPSP---GPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARgGRL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 179 ARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGpAYRAGIMGAVALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKW 258
Cdd:COG0581    78 ARLIRFAIDVLAGVPSIVYGLFGYALFVLTLG-LGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKW 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 259 LTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTVGLITQVNWDLFDgRMATLPVFAYRQYEQGG-VGIDRAWAAALT 337
Cdd:COG0581   157 QTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFD-PFATLPVHIYNLASSPYpAAQELAWAAALV 235

                         250       260
                  ....*....|....*....|...
gi 1912909279 338 LILIVMLLNLIARLISRLFSPKT 360
Cdd:COG0581   236 LLLLVLLLNLLARLLRRRFRKKL 258
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 87-358 1.23e-77

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 239.83  E-value: 1.23e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  87 DRLATTLVTFAFLLALIPLVSLLWIVVTRGAKLFGATFLSTDMVGvygDMTSGGIWHAIVGTLLITGAATIISVPIGLLT 166
Cdd:TIGR00974   1 DKIFTFISLLSALLALLPLIWILWYILIKGLPALNLEFFTKSPTP---TGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 167 AIYLVEYGR-GALARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGPAYRAGIMGAVALSLLMTPVVIRSVEEMLRLVPNE 245
Cdd:TIGR00974  78 AIYLAEYANgSRFTKIIRFAVDILAGVPSIVVGLFGYGFFVLTYLGGGFSLLAGALALALLILPVIIRTTEEALKAVPKD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 246 LREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTVGLITQVNWDLFDgRMATLPVFAYRQYEQG- 324
Cdd:TIGR00974 158 LREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAFTPPNLFD-PFATLPVLIYNLASEGp 236

                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1912909279 325 -GVGIDRAWAAALTLILIVMLLNLIARLISRLFSP 358
Cdd:TIGR00974 237 yVEAQQLAWAAALVLIVLVLLLNLIARLLRRRFKK 271
pstA PRK11268
phosphate ABC transporter permease PstA;
72-354 3.44e-54

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 180.27  E-value: 3.44e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  72 LTITSRVVEGARWATDRLATTLVTFAFLLALIPLVSLLWIVVTRGaklFGATFLSTdmvgvYGDMT------SGGIWHAI 145
Cdd:PRK11268   12 LAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITLG---IDGMSLAL-----FTEMTpppntaGGGLANAI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 146 VGTLLITGAATIISVPIGLLTAIYLVEYGR-GALARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGpaYRAGIMGAVALS 224
Cdd:PRK11268   84 AGSGLLILWATVVGTPLGIMAGIYLAEYGRkSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQME--HFSGWAGVIALA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 225 LLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTvGLITQV-NW 303
Cdd:PRK11268  162 LLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFT-ALSNQFwST 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1912909279 304 DLfDGRMATLPV----FAYRQYEQGGvgiDRAWAAALTLILIVMLLNLIARLISR 354
Cdd:PRK11268  241 DM-MQPIANLPVtifkFAMSPFAEWQ---QLAWAGVLLITLCVLLLNILARVVFA 291
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 145-344 4.97e-14

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 69.61  E-value: 4.97e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 145 IVGTLLITGAATIISVPIGLLTAIYLVEYgRGALARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGPAYRAGIM--GAVA 222
Cdd:cd06261     1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLGlpALIL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 223 LSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLtvglitqvn 302
Cdd:cd06261    80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSF--------- 150

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1912909279 303 wdLFDGRMATLPVFAYRQYEQGGVGIDRAWAAALTLILIVML 344
Cdd:cd06261   151 --LGGGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 163-362 1.14e-09

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 56.92  E-value: 1.14e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 163 GLLTAIYLVEYGRGALARWITFLVDVMTGIPSIVagLFAFSLFTLIFGPAYRAGIMGAVALSLLMTPVVIRSVEEMLRLV 242
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFV--LAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 243 PNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETApLLLTVGLITQVnwdlfdGRMATLPVFAYRqye 322
Cdd:pfam00528  79 PSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAV-LLEFLGSWPGL------GLLLIEAILGYD--- 148

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1912909279 323 qggvgIDRAWAAALTLILIVMLLNLIARLISRLFSPKTAR 362
Cdd:pfam00528 149 -----YPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 148-287 6.64e-04

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 40.22  E-value: 6.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 148 TLLITGAATIISVPIGLLTAIYLVEYGRGAlARWITFLVDVMTGIPSIVAGLFAFSLFTlifgpayRAGIMGA------- 220
Cdd:NF038017    1 SLRVSGTATLIAALIGIPLGALLALRRFPG-RRLVISLLNTLMGLPPVVVGLIVYLLLS-------RSGPLGFlgllytp 72

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1912909279 221 ----VALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKWlTIVKVVLRTSIAGIVTGVMLSIARVIGE 287
Cdd:NF038017   73 tamiIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRW-QALWTLLKEARFALLAAVLAGFGRAISE 142
 
Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 100-360 4.42e-100

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 296.56  E-value: 4.42e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 100 LALIPLVSLLWIVVTRGAKLFGATFLSTDMVGvygDMTSGGIWHAIVGTLLITGAATIISVPIGLLTAIYLVEYGR-GAL 178
Cdd:COG0581     1 LALLPLVWILGTVLVKGLPALSWEFLTSSPSP---GPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARgGRL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 179 ARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGpAYRAGIMGAVALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKW 258
Cdd:COG0581    78 ARLIRFAIDVLAGVPSIVYGLFGYALFVLTLG-LGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKW 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 259 LTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTVGLITQVNWDLFDgRMATLPVFAYRQYEQGG-VGIDRAWAAALT 337
Cdd:COG0581   157 QTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFD-PFATLPVHIYNLASSPYpAAQELAWAAALV 235

                         250       260
                  ....*....|....*....|...
gi 1912909279 338 LILIVMLLNLIARLISRLFSPKT 360
Cdd:COG0581   236 LLLLVLLLNLLARLLRRRFRKKL 258
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 87-358 1.23e-77

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 239.83  E-value: 1.23e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  87 DRLATTLVTFAFLLALIPLVSLLWIVVTRGAKLFGATFLSTDMVGvygDMTSGGIWHAIVGTLLITGAATIISVPIGLLT 166
Cdd:TIGR00974   1 DKIFTFISLLSALLALLPLIWILWYILIKGLPALNLEFFTKSPTP---TGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 167 AIYLVEYGR-GALARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGPAYRAGIMGAVALSLLMTPVVIRSVEEMLRLVPNE 245
Cdd:TIGR00974  78 AIYLAEYANgSRFTKIIRFAVDILAGVPSIVVGLFGYGFFVLTYLGGGFSLLAGALALALLILPVIIRTTEEALKAVPKD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 246 LREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTVGLITQVNWDLFDgRMATLPVFAYRQYEQG- 324
Cdd:TIGR00974 158 LREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAFTPPNLFD-PFATLPVLIYNLASEGp 236

                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1912909279 325 -GVGIDRAWAAALTLILIVMLLNLIARLISRLFSP 358
Cdd:TIGR00974 237 yVEAQQLAWAAALVLIVLVLLLNLIARLLRRRFKK 271
pstA PRK11268
phosphate ABC transporter permease PstA;
72-354 3.44e-54

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 180.27  E-value: 3.44e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  72 LTITSRVVEGARWATDRLATTLVTFAFLLALIPLVSLLWIVVTRGaklFGATFLSTdmvgvYGDMT------SGGIWHAI 145
Cdd:PRK11268   12 LAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITLG---IDGMSLAL-----FTEMTpppntaGGGLANAI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 146 VGTLLITGAATIISVPIGLLTAIYLVEYGR-GALARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGpaYRAGIMGAVALS 224
Cdd:PRK11268   84 AGSGLLILWATVVGTPLGIMAGIYLAEYGRkSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQME--HFSGWAGVIALA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 225 LLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTvGLITQV-NW 303
Cdd:PRK11268  162 LLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFT-ALSNQFwST 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1912909279 304 DLfDGRMATLPV----FAYRQYEQGGvgiDRAWAAALTLILIVMLLNLIARLISR 354
Cdd:PRK11268  241 DM-MQPIANLPVtifkFAMSPFAEWQ---QLAWAGVLLITLCVLLLNILARVVFA 291
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 81-354 7.15e-47

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 161.41  E-value: 7.15e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  81 GARWATDRLATTLVTFAFLLALIPLVSLLWIVVTRGAK----------LFGATFLSTDMVGVYGdmtsggIWHAIVGTLL 150
Cdd:COG0573    11 RRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPafqevgllefLTGTEWNPVSSNGEFG------ILPLIVGTLL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 151 ITGAATIISVPIGLLTAIYLVEYGRGALARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGPAYRAGIMG------AVALS 224
Cdd:COG0573    85 VSLIALLIAVPLGLGIAIFLSEYAPPRLRRILKPAIELLAGIPSVVYGFWGLFVLVPLLRDLFPWPPSGfslltaGIVLA 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 225 LLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTVGLITQVNWD 304
Cdd:COG0573   165 IMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAVLMVAGNAPQIPFS 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1912909279 305 LFDGrMATLPV-----FAYrqYEQGGVGIDRAWAAALTLILIVMLLNLIARLISR 354
Cdd:COG0573   245 LFDP-GRTLTAlialeFGE--APFGSLHYSALFALGLVLFVITLLVNLLARLIVR 296
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 87-357 2.77e-34

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 127.77  E-value: 2.77e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  87 DRLATTLVTFAFLLALIPLVSLLWIVVTRGAKLFGATFLSTDMVGVYGDMTSG------GIWHAIVGTLLITGAATIISV 160
Cdd:TIGR02138   1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIPAFEKNGILNFLTGTVWDPGSGpvqeqyGALPLIVGTLITSLIALLIAV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 161 PIGLLTAIYLVEYGRGALARWITFLVDVMTGIPSIVAGLFAFSLF--------------TLIFGPAYRAGI-MGAVALSL 225
Cdd:TIGR02138  81 PVGIGIAIFLSEIAPKRVRSVLKPVVELLAGIPSVVYGFWGLFVLvpflkphfqpflgsNLGLIPLFGGPIlTAGIVLAI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 226 LMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTVGLITQVN-WD 304
Cdd:TIGR02138 161 MILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGNVFPISpLS 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1912909279 305 LFDG--RMATLPVFAYRQYEQGGVGIDRAWAAALTLILIVMLLNLIARLISRLFS 357
Cdd:TIGR02138 241 LFDPgtTITSLIANQFGEASGGSVHTSALFALGLVLFVITLLVNILARYIVRRRR 295
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
73-354 2.37e-16

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 80.21  E-value: 2.37e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  73 TITSRVVEGARWATDRLATTLVTFAFLLALIPLVSLLWIVVTRGAKLFGATFLSTDmvGVYGDMTSGGIWHAIVGTLLIT 152
Cdd:COG1178   270 TVGGRARRPRRVKLGRWRWLALALCLLLVLLGLLLPLLALLLWSLTKALDDNLTLD--NYRFVLLDPSLLRALLNSLLLA 347

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 153 GAATIISVPIGLLTAiYLVEYGRGALARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGPAYRAGIMG-AVALSLLMTPVV 231
Cdd:COG1178   348 LLAALLAVLLALLLA-YLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNRPLPLLLYGTLAIlVLAYVVRFLPFA 426

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 232 IRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGEtapllLTVGLItqvnwdLFDGRMA 311
Cdd:COG1178   427 LRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKE-----LSATLL------LRPPGFE 495

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1912909279 312 TLPVFAYRQYEQGGVGidRAWAAALTLILIVMLLNLIARLISR 354
Cdd:COG1178   496 TLAVLIYQLASSGRYG--EAAALALLLVLVSLLPVLLLERLLG 536
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 92-354 9.82e-15

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 73.25  E-value: 9.82e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  92 TLVTFAFLLALIPLVSLLWIVVTRGAKLFGATFLSTDMvgvygdmtsggiWHAIVGTLLITGAATIISVPIGLLTAIYLV 171
Cdd:COG0555    15 LTLLYLSLIVLLPLAALVLKAAGLGWAEFWAVLTSPRV------------LAALKLSLGTALIAALINLVFGLPLAWVLV 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 172 EYgRGALARWITFLVDVMTGIPSIVAGLfafsLFTLIFGPAYRAGIMGA--------------VALSLLMTPVVIRSVEE 237
Cdd:COG0555    83 RY-RFPGKRLVDALVDLPFALPTAVAGI----ALLLLFGPNGWLGQLLAplgikvaftplgivLAQTFVSLPFVVRTVQP 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 238 MLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTVGLItqvnwdlfDGRMATLPVFA 317
Cdd:COG0555   158 VLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNL--------PMKTEILPLLI 229

                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1912909279 318 YRQYEQGgvGIDRAWAAALTLILIVMLLNLIARLISR 354
Cdd:COG0555   230 YLKLEEG--DYAGATAIALVLLLISFLLLLLINLLQR 264
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 145-344 4.97e-14

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 69.61  E-value: 4.97e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 145 IVGTLLITGAATIISVPIGLLTAIYLVEYgRGALARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGPAYRAGIM--GAVA 222
Cdd:cd06261     1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLGlpALIL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 223 LSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLtvglitqvn 302
Cdd:cd06261    80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSF--------- 150

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1912909279 303 wdLFDGRMATLPVFAYRQYEQGGVGIDRAWAAALTLILIVML 344
Cdd:cd06261   151 --LGGGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
pstC PRK11275
phosphate ABC transporter permease PstC;
145-302 1.71e-10

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 61.25  E-value: 1.71e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 145 IVGTLLITGAATIISVPIGLLTAIYLVEYGRGALARWITFLVDVMTGIPSIVAGLFAFSLFTLIF--------------- 209
Cdd:PRK11275   75 IYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFVFAPLFatyfqepvgnvlsni 154

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 210 --------GPAYRAGIMGA-VALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLS 280
Cdd:PRK11275  155 pivgalfsGPAFGIGILAAgVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLG 234

                         170       180
                  ....*....|....*....|..
gi 1912909279 281 IARVIGETAPLLLTVGLITQVN 302
Cdd:PRK11275  235 LGRALGETMAVTFIIGNTYQLD 256
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 163-362 1.14e-09

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 56.92  E-value: 1.14e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 163 GLLTAIYLVEYGRGALARWITFLVDVMTGIPSIVagLFAFSLFTLIFGPAYRAGIMGAVALSLLMTPVVIRSVEEMLRLV 242
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFV--LAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 243 PNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETApLLLTVGLITQVnwdlfdGRMATLPVFAYRqye 322
Cdd:pfam00528  79 PSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAV-LLEFLGSWPGL------GLLLIEAILGYD--- 148

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1912909279 323 qggvgIDRAWAAALTLILIVMLLNLIARLISRLFSPKTAR 362
Cdd:pfam00528 149 -----YPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
82-354 1.53e-09

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 59.02  E-value: 1.53e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  82 ARWATDRLATTLVTFAFLLALIPLVSLLWIVVTRGAKLFGATFLSTdmvgvygdmtsgGIWHAIVGTLLITGAATIISVP 161
Cdd:COG1178     5 PRRRPRLLLLLLALLLALLVLLPLLALLLRAFTDGLANFWALLSDP------------YLWRALGNTLLLALLVTLLSLL 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 162 IGLLTAiYLVEYGRGALARWITFLVDVMTGIPSIVAGL--------------FAFSLFTLIFGPAYraGIMGAV-ALSLL 226
Cdd:COG1178    73 LGVPLA-WLLARTDFPGRRLLRWLLLLPLALPPYVVALawialfgpngllntLLRALFGLEPPDIY--GLGGIIlVLVLF 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 227 MTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGE-TAPLLLtvglitqvnwdl 305
Cdd:COG1178   150 NYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADfGTPLVL------------ 217

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1912909279 306 fDGRMATLPVFAYRQYeQGGVGIDRAWAAALTLILIVMLLNLIARLISR 354
Cdd:COG1178   218 -GGGYTTLTTAIYQAW-LGDFDLGAAAALALVLLLLVLLLLLLERRLRR 264
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 137-354 2.29e-09

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 57.43  E-value: 2.29e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 137 TSGGIWHAIVGTLLITGAATIISVPIGLLTAIYLVEYgRGALARWITFLVDVMTGIPSIVAGLFAFSLFTLIfgpAYRAG 216
Cdd:COG1177    55 SDPRLLDALLNSLLIALLSTLLATVLGTPAALALARY-RFRGRRLLLALLLLPLVVPGIVLGVALLLLFSAL---GLSGG 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 217 IMGAV-ALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLTV 295
Cdd:COG1177   131 LWGLIlAHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLA 210

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1912909279 296 GlitqvnwdlfdGRMATLPVFAYRQYEQGGVGIdrAWAAALTLILIVMLLNLIARLISR 354
Cdd:COG1177   211 G-----------PGVTTLPVYIYSMIRRGISPE--INALSTLLILLSLLLLLLAERLRR 256
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
148-298 2.54e-06

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 48.21  E-value: 2.54e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 148 TLLITGAATIISVPIGLLTAIYLVEY---GRGALARwitfLVDVMTGIPSIVAGLFAFSLFTLI---------FGPAYRA 215
Cdd:PRK10971   63 TLLSAFVASIFNAVFGLLMAWILTRYrfpGRTLLDA----LMDLPFALPTAVAGLTLASLFSVNgwygewlakFDIKVTY 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 216 GIMG-AVALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPLLLT 294
Cdd:PRK10971  139 TWLGiAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFI 218


                  ....
gi 1912909279 295 VGLI 298
Cdd:PRK10971  219 AGNI 222
DppB COG0601
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 141-286 2.55e-06

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440366 [Multi-domain]  Cd Length: 314  Bit Score: 48.53  E-value: 2.55e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 141 IWHAIVGTLLITGAATIISVPIGLLTAIYLVEYGRGALARWITFLVDVMTGIPSIVAGLFAFSLFTL------------- 207
Cdd:COG0601    91 IAERLPVTLELALLALLLALLIGIPLGILAALRRGSWLDRLITVLALLGISIPSFWLGLLLILLFAVklgwlpvsgrvsp 170

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 208 --IFGPAYRAGIMGAVALSLLMTPVVIRSV-EEMLrlvpNELRE----ASLALGVPKWLTIVKVVLRTSIAGIVTGVMLS 280
Cdd:COG0601   171 weDFLDALRHLILPALTLALGSLAGIARLTrSSML----EVLGQdyvrTARAKGLSERRVLLRHALRNALIPVVTVLGLQ 246


                  ....*.
gi 1912909279 281 IARVIG 286
Cdd:COG0601   247 LGGLLG 252
cysT CHL00187
sulfate transport protein; Provisional
 148-287 3.98e-06

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 47.32  E-value: 3.98e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 148 TLLITGAATIISVPIGLLTAIYLVEY---GRgalaRWITFLVDVMTGIPSIVAGL---------------FAFSLFTLIF 209
Cdd:CHL00187   60 TLSMALIAALINGFFGLLIAWVLVRYnfpGK----RLLDAAVDLPFALPTSVAGLtlatvygdngwighlLSHLGIQIVF 135

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1912909279 210 gpaYRAGImgAVALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGE 287
Cdd:CHL00187  136 ---TKLGV--LLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGE 208
modB PRK09421
molybdate ABC transporter permease subunit;
142-362 5.76e-06

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 46.84  E-value: 5.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 142 WHAIVGTLLITGAATIISVPIGLLTAIYLVE---YGRGALARWITF---LVDVMTGIPSIVA-------GLFAFSLFTLI 208
Cdd:PRK09421    8 WQAVLLSLKVSSVAVLFSLPFGILVAWLLARcrfPGKSLLDSLLHLplvLPPVVTGYLLLISmgrrgfiGQWLYEWFGIS 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 209 FGPAYRagimGAVALSLLMT-PVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGE 287
Cdd:PRK09421   88 FAFSWR----GAALAAAVMAfPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1912909279 288 TAPLLLTVGLITqvnwdlfdGRMATLPVFAYRQYEQGGvgidrAWAAALTLILIVMLLNLIARLISRLFSPKTAR 362
Cdd:PRK09421  164 FGATITFVSNIP--------GETQTIPSAMYTLIQTPG-----GESAAARLCIISIAIALASLLLSEWLARRSRK 225
DppC COG1173
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 140-349 7.85e-06

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440786 [Multi-domain]  Cd Length: 275  Bit Score: 47.03  E-value: 7.85e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 140 GIWHAIVGTLLITGAATIISVPIGLLTAiylveYGRGALARWITFLVDVMTGIPSIVAGLfafsLFTLIFGPAYRAGImg 219
Cdd:COG1173    77 GARISLLVGLLAVLIALVIGVLLGLLAG-----YFGGWVDAVLMRLVDVLLAFPSLLLAI----ALVAVLGPGLLNVI-- 145

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 220 aVALSLLMTPVVIRSVE-EMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETAPL-LLTVGL 297
Cdd:COG1173   146 -LALGLTGWPGYARLVRaQVLSLREREYVEAARALGASPLRIIFRHILPNVLPPLIVQATLGIASAILAEAGLsFLGLGV 224

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1912909279 298 -ITQVNWdlfdGRMatlpVFAYRQYeqggvgIDRAW----AAALTLILIVMLLNLIA 349
Cdd:COG1173   225 qPPTPSW----GTM----LSEGRNY------LLTAPwlalFPGLAIVLTVLAFNLLG 267
HisM COG0765
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ...
 141-266 6.55e-04

ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440528 [Multi-domain]  Cd Length: 218  Bit Score: 40.44  E-value: 6.55e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 141 IWHAIVGTLLITGAATIISVPIGLLTAiyLVEYGRGALARWI-TFLVDVMTGIPSIVAGLFAFSLFTLIFG--PAYRAGI 217
Cdd:COG0765    15 LLEGLLVTLLLTVLAIVLGLVLGLLLA--LARLSPNPVLRWLaTAYVEFFRGTPLLVQLFFIYFGLPLLGIdlSPFVAAV 92

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1912909279 218 mgaVALSLLMTPV---VIRSVeemLRLVPNELREASLALGVPKWLTIVKVVL 266
Cdd:COG0765    93 ---IALTLNSAAYlaeIVRAG---IQSVPKGQWEAARALGLSRWQTMRRIIL 138
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 148-287 6.64e-04

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 40.22  E-value: 6.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 148 TLLITGAATIISVPIGLLTAIYLVEYGRGAlARWITFLVDVMTGIPSIVAGLFAFSLFTlifgpayRAGIMGA------- 220
Cdd:NF038017    1 SLRVSGTATLIAALIGIPLGALLALRRFPG-RRLVISLLNTLMGLPPVVVGLIVYLLLS-------RSGPLGFlgllytp 72

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1912909279 221 ----VALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKWlTIVKVVLRTSIAGIVTGVMLSIARVIGE 287
Cdd:NF038017   73 tamiIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRW-QALWTLLKEARFALLAAVLAGFGRAISE 142
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
83-287 9.61e-04

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 40.51  E-value: 9.61e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  83 RWATDRLATTLVTFAFLLALIPLVSLLWIVVTRGAKLFGATFLSTDMVgvygdmtsggiwHAIVGTLLITGAATIISVPI 162
Cdd:PRK11602   16 NWGKWFLIGIGMLVSAFILVVPMIYIFVQAFSKGLMPVLQNLADPDML------------HAIWLTVLIALIAVPVNLVF 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 163 GLLTAiYLVEYGRGALARWITFLVDVMTGIPSIVAGLFaFSLFTLIFGP------AYRAGIM----GAVALSLLMT-PVV 231
Cdd:PRK11602   84 GILLA-WLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLV-YLLFYGSNGPlggwldEHNLQLMfswpGMVLVTIFVTcPFV 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1912909279 232 IRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGE 287
Cdd:PRK11602  162 VRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGE 217
PRK10782 PRK10782
D-methionine ABC transporter permease MetI;
140-289 2.99e-03

D-methionine ABC transporter permease MetI;


Pssm-ID: 182726  Cd Length: 217  Bit Score: 38.56  E-value: 2.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 140 GIWHAIVGTLLITGAATIISVPIGLLtaIYLVEYGR----GALARWITFLVDVMTGIPSIVAGLFAFSLFTLIFGPAYra 215
Cdd:PRK10782   12 GVWETLAMTFVSGFFGFVIGLPVGVL--LYVTRPGQiianAKLYRTLSALVNIFRSIPFIILLVWMIPFTRVIVGTSI-- 87

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1912909279 216 GIMGA-VALSLLMTPVVIRSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGETA 289
Cdd:PRK10782   88 GLQAAiVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSA 162
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 89-362 5.28e-03

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 38.20  E-value: 5.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279  89 LATTLVTFAFLLALIPLVSLLWIVVTRGAKLFGATFLSTdmVGVYGDM-TSGGIWHAIVGTLLITGAATIISVPIGLLTA 167
Cdd:COG1176    14 LLLPALLWLLLFFVLPLLLLLVYSFTTRDPYGGVVPGFT--LENYARLfTDPLYLKVLLRTLWIALLTTLICLLLGYPIA 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 168 IYLVEYgRGALARWITFLVDVMTGIPSIVA-----------GLF--AFSLFTLIFGPAYRAGIMGAVALSL--LMTPVVI 232
Cdd:COG1176    92 YFLARA-PPRWRNLLLLLVILPFWTSFLVRtyawivllgrnGLLnsLLLALGLIDEPLRLLYTEFAVVIGLvyVYLPFMV 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1912909279 233 RSVEEMLRLVPNELREASLALGVPKWLTIVKVVLRTSIAGIVTGVMLSIARVIGE-TAPLLLTvglitqvnwdlfDGRMA 311
Cdd:COG1176   171 LPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAfVTPALLG------------GGKVL 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1912909279 312 TLPVFAYRQYEQGGvgiDRAWAAALTLILIVMLLnLIARLISRLFSPKTAR 362
Cdd:COG1176   239 MIGNLIYQQFLSAL---NWPLAAALAVVLLLIVL-LVLLLYLRLLRRRRLL 285
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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