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Conserved domains on  [gi|1918979693|ref|WP_193306093|]
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SSURE domain-containing protein, partial [Streptococcus pneumoniae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SSURE super family cl13413
SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to ...
 84-231 9.63e-89

SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to bind to extracellular matrix protein fibronectin but not to collagen or submaxillary mucin in Streptococci. Anti-SSURE antibodies recognized the corresponding protein on the surface of streptococcal cells. The full-length proteins are thus fibronectin-binding surface adhesins. The structure was predicted to be composed of two subdomains.


The actual alignment was detected with superfamily member pfam11966:

Pssm-ID: 432226  Cd Length: 149  Bit Score: 258.63  E-value: 9.63e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1918979693  84 KETVQKAVADNVKDSIDVPAAYLEKAKGEGPFTAGVNHVIPYELFAGDGMLTRLLLKASDKAPWSDNGDAKNPALSPLgE 163
Cdd:pfam11966   1 PDEVKKSVKENFKDTVDVPAAYLEKAKGKGPFLAGVNQVIPYEAFGGDGMLTRLLLKASDGAPWSDNGVAKNPALLPL-E 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1918979693 164 NVkTKGQYFYQLALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTIKIN 231
Cdd:pfam11966  80 GL-TKGKYFYQVSLNGNTAGKEGQALLDQIRANGTHTYQATVKVYGAKDGKVDLTNIVATKNVTININ 146
SSURE super family cl13413
SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to ...
 1-82 1.10e-41

SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to bind to extracellular matrix protein fibronectin but not to collagen or submaxillary mucin in Streptococci. Anti-SSURE antibodies recognized the corresponding protein on the surface of streptococcal cells. The full-length proteins are thus fibronectin-binding surface adhesins. The structure was predicted to be composed of two subdomains.


The actual alignment was detected with superfamily member pfam11966:

Pssm-ID: 432226  Cd Length: 149  Bit Score: 138.84  E-value: 1.10e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1918979693   1 AKNPALSPLgENVkTKGQYFYQVALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTINING 80
Cdd:pfam11966  70 AKNPALLPL-EGL-TKGKYFYQVSLNGNTAGKEGQALLDQIRANGTHTYQATVKVYGAKDGKVDLTNIVATKNVTININV 147


                  ..
gi 1918979693  81 LI 82
Cdd:pfam11966 148 LV 149
 
Name Accession Description Interval E-value
SSURE pfam11966
SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to ...
 84-231 9.63e-89

SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to bind to extracellular matrix protein fibronectin but not to collagen or submaxillary mucin in Streptococci. Anti-SSURE antibodies recognized the corresponding protein on the surface of streptococcal cells. The full-length proteins are thus fibronectin-binding surface adhesins. The structure was predicted to be composed of two subdomains.


Pssm-ID: 432226  Cd Length: 149  Bit Score: 258.63  E-value: 9.63e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1918979693  84 KETVQKAVADNVKDSIDVPAAYLEKAKGEGPFTAGVNHVIPYELFAGDGMLTRLLLKASDKAPWSDNGDAKNPALSPLgE 163
Cdd:pfam11966   1 PDEVKKSVKENFKDTVDVPAAYLEKAKGKGPFLAGVNQVIPYEAFGGDGMLTRLLLKASDGAPWSDNGVAKNPALLPL-E 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1918979693 164 NVkTKGQYFYQLALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTIKIN 231
Cdd:pfam11966  80 GL-TKGKYFYQVSLNGNTAGKEGQALLDQIRANGTHTYQATVKVYGAKDGKVDLTNIVATKNVTININ 146
SSURE pfam11966
SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to ...
 1-82 1.10e-41

SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to bind to extracellular matrix protein fibronectin but not to collagen or submaxillary mucin in Streptococci. Anti-SSURE antibodies recognized the corresponding protein on the surface of streptococcal cells. The full-length proteins are thus fibronectin-binding surface adhesins. The structure was predicted to be composed of two subdomains.


Pssm-ID: 432226  Cd Length: 149  Bit Score: 138.84  E-value: 1.10e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1918979693   1 AKNPALSPLgENVkTKGQYFYQVALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTINING 80
Cdd:pfam11966  70 AKNPALLPL-EGL-TKGKYFYQVSLNGNTAGKEGQALLDQIRANGTHTYQATVKVYGAKDGKVDLTNIVATKNVTININV 147


                  ..
gi 1918979693  81 LI 82
Cdd:pfam11966 148 LV 149
 
Name Accession Description Interval E-value
SSURE pfam11966
SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to ...
 84-231 9.63e-89

SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to bind to extracellular matrix protein fibronectin but not to collagen or submaxillary mucin in Streptococci. Anti-SSURE antibodies recognized the corresponding protein on the surface of streptococcal cells. The full-length proteins are thus fibronectin-binding surface adhesins. The structure was predicted to be composed of two subdomains.


Pssm-ID: 432226  Cd Length: 149  Bit Score: 258.63  E-value: 9.63e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1918979693  84 KETVQKAVADNVKDSIDVPAAYLEKAKGEGPFTAGVNHVIPYELFAGDGMLTRLLLKASDKAPWSDNGDAKNPALSPLgE 163
Cdd:pfam11966   1 PDEVKKSVKENFKDTVDVPAAYLEKAKGKGPFLAGVNQVIPYEAFGGDGMLTRLLLKASDGAPWSDNGVAKNPALLPL-E 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1918979693 164 NVkTKGQYFYQLALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTIKIN 231
Cdd:pfam11966  80 GL-TKGKYFYQVSLNGNTAGKEGQALLDQIRANGTHTYQATVKVYGAKDGKVDLTNIVATKNVTININ 146
SSURE pfam11966
SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to ...
 1-82 1.10e-41

SSURE domain; Streptococcal surface repeat domain - SSURE - is a protein fragment found to bind to extracellular matrix protein fibronectin but not to collagen or submaxillary mucin in Streptococci. Anti-SSURE antibodies recognized the corresponding protein on the surface of streptococcal cells. The full-length proteins are thus fibronectin-binding surface adhesins. The structure was predicted to be composed of two subdomains.


Pssm-ID: 432226  Cd Length: 149  Bit Score: 138.84  E-value: 1.10e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1918979693   1 AKNPALSPLgENVkTKGQYFYQVALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTINING 80
Cdd:pfam11966  70 AKNPALLPL-EGL-TKGKYFYQVSLNGNTAGKEGQALLDQIRANGTHTYQATVKVYGAKDGKVDLTNIVATKNVTININV 147


                  ..
gi 1918979693  81 LI 82
Cdd:pfam11966 148 LV 149
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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