|
Name |
Accession |
Description |
Interval |
E-value |
| RpiB |
COG0698 |
Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Ribose 5-phosphate ... |
6-153 |
4.92e-60 |
|
Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Ribose 5-phosphate isomerase RpiB is part of the Pathway/BioSystem: Pentose phosphate pathway
Pssm-ID: 440462 Cd Length: 149 Bit Score: 182.59 E-value: 4.92e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 6 RLVVGCDSAGVEYRDRIKADLEADPrvASVVDVGVPSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKVP 85
Cdd:COG0698 2 KIAIGSDHAGFELKEAIKEYLEEKG--HEVVDFGTYSEDSVDYPDFAIKVAEAVASGEADRGILICGTGIGMSIAANKVP 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1926905355 86 GIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFDsSSASAEKVAAIGEYEQN 153
Cdd:COG0698 80 GIRAALCHDPYSARLAREHNDANVLCLGARVIGPELAKEIVDAFLATEFE-GGRHQRRVDKISELEKE 146
|
|
| LacAB_rpiB |
pfam02502 |
Ribose/Galactose Isomerase; This family of proteins contains the sugar isomerase enzymes ... |
8-137 |
4.91e-58 |
|
Ribose/Galactose Isomerase; This family of proteins contains the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB).
Pssm-ID: 460573 Cd Length: 134 Bit Score: 176.81 E-value: 4.91e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 8 VVGCDSAGVEYRDRIKADLEAdpRVASVVDVGVPSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKVPGI 87
Cdd:pfam02502 2 AIGSDHAGFELKEEIKEYLEE--KGHEVIDFGTYSEESVDYPDYAHKVAEAVASGEADRGILICGTGIGMSIAANKVPGI 79
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1926905355 88 RAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFDSS 137
Cdd:pfam02502 80 RAALCHDPYSAKLAREHNDANVLCLGARVIGPELAKEIVDAFLNTEFEGG 129
|
|
| RPI_actino |
TIGR02133 |
ribose 5-phosphate isomerase; This family is a member of the RpiB/LacA/LacB subfamily ... |
5-151 |
1.10e-49 |
|
ribose 5-phosphate isomerase; This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Pssm-ID: 273989 Cd Length: 148 Bit Score: 156.08 E-value: 1.10e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 5 LRLVVGCDSAGVEYRDRIKADLEADPrvASVVDVGVPSGD-ETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANK 83
Cdd:TIGR02133 1 MRVVLGHDHAGFEYKEALWLDLAAHE--PEVCDVGVYDADdDDDYPCFCIAAAEAVARDAADLGIVIGGSGNGEAIAANK 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1926905355 84 VPGIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFDSSSASAEKVAAIGEYE 151
Cdd:TIGR02133 79 VKGARAALAWDTASAGRARLHNNANVVGAGMRMHGLEEAFRLVFEFLGFEFDARSRHARRIDSISEYE 146
|
|
| PRK05571 |
PRK05571 |
ribose-5-phosphate isomerase B; Provisional |
6-153 |
4.91e-47 |
|
ribose-5-phosphate isomerase B; Provisional
Pssm-ID: 235509 Cd Length: 148 Bit Score: 149.54 E-value: 4.91e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 6 RLVVGCDSAGVEYRDRIKADLEAdpRVASVVDVGVPSGDETA-YPHVAVDAARKVAAGEADRAILICGTGLGVAISANKV 84
Cdd:PRK05571 2 KIAIGSDHAGFELKEEIIEHLEE--LGHEVIDLGPDSYDASVdYPDYAKKVAEAVVAGEADRGILICGTGIGMSIAANKV 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1926905355 85 PGIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFdSSSASAEKVAAIGEYEQN 153
Cdd:PRK05571 80 KGIRAALCHDTYSAHLAREHNNANVLALGARVIGPELAKDIVDAFLATEF-EGGRHQRRIDKIDEYEAQ 147
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| RpiB |
COG0698 |
Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Ribose 5-phosphate ... |
6-153 |
4.92e-60 |
|
Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]; Ribose 5-phosphate isomerase RpiB is part of the Pathway/BioSystem: Pentose phosphate pathway
Pssm-ID: 440462 Cd Length: 149 Bit Score: 182.59 E-value: 4.92e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 6 RLVVGCDSAGVEYRDRIKADLEADPrvASVVDVGVPSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKVP 85
Cdd:COG0698 2 KIAIGSDHAGFELKEAIKEYLEEKG--HEVVDFGTYSEDSVDYPDFAIKVAEAVASGEADRGILICGTGIGMSIAANKVP 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1926905355 86 GIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFDsSSASAEKVAAIGEYEQN 153
Cdd:COG0698 80 GIRAALCHDPYSARLAREHNDANVLCLGARVIGPELAKEIVDAFLATEFE-GGRHQRRVDKISELEKE 146
|
|
| LacAB_rpiB |
pfam02502 |
Ribose/Galactose Isomerase; This family of proteins contains the sugar isomerase enzymes ... |
8-137 |
4.91e-58 |
|
Ribose/Galactose Isomerase; This family of proteins contains the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB).
Pssm-ID: 460573 Cd Length: 134 Bit Score: 176.81 E-value: 4.91e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 8 VVGCDSAGVEYRDRIKADLEAdpRVASVVDVGVPSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKVPGI 87
Cdd:pfam02502 2 AIGSDHAGFELKEEIKEYLEE--KGHEVIDFGTYSEESVDYPDYAHKVAEAVASGEADRGILICGTGIGMSIAANKVPGI 79
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1926905355 88 RAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFDSS 137
Cdd:pfam02502 80 RAALCHDPYSAKLAREHNDANVLCLGARVIGPELAKEIVDAFLNTEFEGG 129
|
|
| RPI_actino |
TIGR02133 |
ribose 5-phosphate isomerase; This family is a member of the RpiB/LacA/LacB subfamily ... |
5-151 |
1.10e-49 |
|
ribose 5-phosphate isomerase; This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Pssm-ID: 273989 Cd Length: 148 Bit Score: 156.08 E-value: 1.10e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 5 LRLVVGCDSAGVEYRDRIKADLEADPrvASVVDVGVPSGD-ETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANK 83
Cdd:TIGR02133 1 MRVVLGHDHAGFEYKEALWLDLAAHE--PEVCDVGVYDADdDDDYPCFCIAAAEAVARDAADLGIVIGGSGNGEAIAANK 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1926905355 84 VPGIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFDSSSASAEKVAAIGEYE 151
Cdd:TIGR02133 79 VKGARAALAWDTASAGRARLHNNANVVGAGMRMHGLEEAFRLVFEFLGFEFDARSRHARRIDSISEYE 146
|
|
| PRK05571 |
PRK05571 |
ribose-5-phosphate isomerase B; Provisional |
6-153 |
4.91e-47 |
|
ribose-5-phosphate isomerase B; Provisional
Pssm-ID: 235509 Cd Length: 148 Bit Score: 149.54 E-value: 4.91e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 6 RLVVGCDSAGVEYRDRIKADLEAdpRVASVVDVGVPSGDETA-YPHVAVDAARKVAAGEADRAILICGTGLGVAISANKV 84
Cdd:PRK05571 2 KIAIGSDHAGFELKEEIIEHLEE--LGHEVIDLGPDSYDASVdYPDYAKKVAEAVVAGEADRGILICGTGIGMSIAANKV 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1926905355 85 PGIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFdSSSASAEKVAAIGEYEQN 153
Cdd:PRK05571 80 KGIRAALCHDTYSAHLAREHNNANVLALGARVIGPELAKDIVDAFLATEF-EGGRHQRRIDKIDEYEAQ 147
|
|
| rpiB_lacA_lacB |
TIGR00689 |
sugar-phosphate isomerase, RpiB/LacA/LacB family; Proteins of known function in this family ... |
7-152 |
1.39e-37 |
|
sugar-phosphate isomerase, RpiB/LacA/LacB family; Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to complete the pentose phosphate pathway.
Pssm-ID: 129772 Cd Length: 144 Bit Score: 125.18 E-value: 1.39e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 7 LVVGCDSAGVEYRDRIKADLEAdpRVASVVDVGVPSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKVPG 86
Cdd:TIGR00689 1 IAIGSDHAGLELKSEIIEHLKQ--KGHEVIDCGTLYDERVDYPDYAKLVADKVVAGEVSLGILICGTGIGMSIAANKFKG 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1926905355 87 IRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFDSSSASaEKVAAIGEYEQ 152
Cdd:TIGR00689 79 IRAALCVDEYTAALARQHNDANVLCLGSRVVGVELALSIVDAFLTTQFEGGRHQ-RRIDKIIEYER 143
|
|
| rpiB |
TIGR01120 |
ribose 5-phosphate isomerase B; Involved in the non-oxidative branch of the pentose phospate ... |
6-135 |
2.42e-33 |
|
ribose 5-phosphate isomerase B; Involved in the non-oxidative branch of the pentose phospate pathway. [Energy metabolism, Pentose phosphate pathway]
Pssm-ID: 130190 Cd Length: 143 Bit Score: 114.63 E-value: 2.42e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 6 RLVVGCDSAGVEYRDRIKADLEAdpRVASVVDVGVPSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKVP 85
Cdd:TIGR01120 1 KIAIGSDHAGFILKEEIKAFLVE--RGVKVIDKGTWSSERTDYPHYAKQVALAVAGGEVDGGILICGTGIGMSIAANKFA 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1926905355 86 GIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFD 135
Cdd:TIGR01120 79 GIRAALCSEPYMAQMSRLHNDANVLCLGERVVGLELAKSIVDAWLGTQFE 128
|
|
| PTZ00215 |
PTZ00215 |
ribose 5-phosphate isomerase; Provisional |
4-153 |
2.63e-33 |
|
ribose 5-phosphate isomerase; Provisional
Pssm-ID: 185516 Cd Length: 151 Bit Score: 114.73 E-value: 2.63e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 4 GLRLVVGCDSAGVEYRDRIKADLEADPRVASVVDVGVPSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANK 83
Cdd:PTZ00215 2 QKKVAIGSDHAGFDLKNEIIDYIKNKGKEYKIEDMGTYTAESVDYPDFAEKVCEEVLKGEADTGILVCGSGIGISIAANK 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 84 VPGIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFdSSSASAEKVAAIGEYEQN 153
Cdd:PTZ00215 82 VKGIRCALCHDHYTARMSRQHNNANVLAFGGRTTGIEVAKEIIDTFLSTPF-EGGRHTERIDKISAIEEE 150
|
|
| PRK08622 |
PRK08622 |
galactose-6-phosphate isomerase subunit LacB; Reviewed |
35-153 |
7.21e-17 |
|
galactose-6-phosphate isomerase subunit LacB; Reviewed
Pssm-ID: 181506 Cd Length: 171 Bit Score: 72.76 E-value: 7.21e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 35 VVDVGVPSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKVPGIRAVTAHDSFSVERSVLSNDAQVLCMGQ 114
Cdd:PRK08622 29 VIDVGTYDFTRTHYPIFGKKVGEAVASGEADLGVCICGTGVGISNAVNKVPGIRSALVRDMTSALYAKEELNANVIGFGG 108
|
90 100 110
....*....|....*....|....*....|....*....
gi 1926905355 115 RVIGVELARRLAKEWIGYEFDSSSASAEKVAAIGEYEQN 153
Cdd:PRK08622 109 KITGELLMCDIIDAFINAEYKPTEENKKLIEKIDHLEKP 147
|
|
| PRK12615 |
PRK12615 |
galactose-6-phosphate isomerase subunit LacB; Reviewed |
5-151 |
2.44e-12 |
|
galactose-6-phosphate isomerase subunit LacB; Reviewed
Pssm-ID: 171610 Cd Length: 171 Bit Score: 61.20 E-value: 2.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 5 LRLVVGCDSAGVEYRDRIKADLEAdpRVASVVDVGVPSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKV 84
Cdd:PRK12615 1 MKIAIGCDHIVTNEKMAVSDFLKS--KGYDVIDCGTYDHTRTHYPIFGKKVGEAVVNGQADLGVCICGTGVGINNAVNKV 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1926905355 85 PGIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFDSSSASAEKVAAIGEYE 151
Cdd:PRK12615 79 PGIRSALVRDMTTALYAKEELNANVIGFGGKITGELLMCDIIDAFIKAEYKETEENKKLIAKIAHLE 145
|
|
| PRK08621 |
PRK08621 |
galactose-6-phosphate isomerase subunit LacA; Reviewed |
5-135 |
1.69e-10 |
|
galactose-6-phosphate isomerase subunit LacA; Reviewed
Pssm-ID: 181505 Cd Length: 142 Bit Score: 55.49 E-value: 1.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 5 LRLVVGCDSAGVEYRDRIKADLEADPRvaSVVDVgVPSGDETaYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKV 84
Cdd:PRK08621 1 MAIIIGADKAGFELKEVVKDYLEDNKY--EVVDV-TEEGAED-FVDSTLAVAKEVNKSEDNLGIVIDAYGAGSFMVATKI 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1926905355 85 PGIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFD 135
Cdd:PRK08621 77 KGMVAAEVSDERSAYMTRGHNNARMITMGSEIVGDGLAKNIIKGFVEGKYD 127
|
|
| PRK12613 |
PRK12613 |
galactose-6-phosphate isomerase subunit LacA; Provisional |
5-135 |
5.21e-06 |
|
galactose-6-phosphate isomerase subunit LacA; Provisional
Pssm-ID: 171609 Cd Length: 141 Bit Score: 43.38 E-value: 5.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926905355 5 LRLVVGCDSAGVEYRDRIKADLEADPrvASVVDVgvpSGDETAYPHVAVDAARKVAAGEADRAILICGTGLGVAISANKV 84
Cdd:PRK12613 1 MAIILGADAHGNALKELIKSFLQEEG--YDIIDV---TDINSDFIDNTLAVAKAVNEAEGRLGIMVDAYGAGPFMVATKL 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1926905355 85 PGIRAVTAHDSFSVERSVLSNDAQVLCMGQRVIGVELARRLAKEWIGYEFD 135
Cdd:PRK12613 76 KGMVAAEVSDERSAYMTRGHNNARMITMGAEIVGPELAKNIAKGFVTGPYD 126
|
|
| PRK09273 |
PRK09273 |
hypothetical protein; Provisional |
28-96 |
3.21e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 181746 [Multi-domain] Cd Length: 211 Bit Score: 36.48 E-value: 3.21e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1926905355 28 ADPRVASVVDVGVpSGDETA---YPHVAVDAARKVAAGEADRAILICGTGLGVAISANKVPGIR---AVTAHDSF 96
Cdd:PRK09273 26 ADPKGHEVFNYGM-YDEEDHqltYVQNGIMASILLNSKAVDFVVTGCGTGQGAMLALNSFPGVVcgyCIDPTDAY 99
|
|
|