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Conserved domains on  [gi|1954786967|ref|WP_199776360|]
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Imm49 family immunity protein, partial [Pseudoalteromonas sp. T1lg122]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Imm49 super family cl21376
Immunity protein 49; A predicted immunity protein with an all alpha-helical fold and a ...
 1-62 2.50e-11

Immunity protein 49; A predicted immunity protein with an all alpha-helical fold and a conserved proline residue. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbour of the toxin gene, usually containing a domain of the Tox-REAse-1 or Tox-REase-6 families.


The actual alignment was detected with superfamily member pfam15575:

Pssm-ID: 434794  Cd Length: 214  Bit Score: 55.97  E-value: 2.50e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1954786967   1 EQEYNQAMEKALLAHKEYYS--DEERIGSRRGGLAIPLIALAIIAKDvKAYKLTVENGYIPAWL 62
Cdd:pfam15575 152 EEGFEEALLEALEAHREYWTadLEDRRLDPRGFLSLPLLALACLAYD-RGFELEVESPYLPKEL 214
 
Name Accession Description Interval E-value
Imm49 pfam15575
Immunity protein 49; A predicted immunity protein with an all alpha-helical fold and a ...
 1-62 2.50e-11

Immunity protein 49; A predicted immunity protein with an all alpha-helical fold and a conserved proline residue. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbour of the toxin gene, usually containing a domain of the Tox-REAse-1 or Tox-REase-6 families.


Pssm-ID: 434794  Cd Length: 214  Bit Score: 55.97  E-value: 2.50e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1954786967   1 EQEYNQAMEKALLAHKEYYS--DEERIGSRRGGLAIPLIALAIIAKDvKAYKLTVENGYIPAWL 62
Cdd:pfam15575 152 EEGFEEALLEALEAHREYWTadLEDRRLDPRGFLSLPLLALACLAYD-RGFELEVESPYLPKEL 214
 
Name Accession Description Interval E-value
Imm49 pfam15575
Immunity protein 49; A predicted immunity protein with an all alpha-helical fold and a ...
 1-62 2.50e-11

Immunity protein 49; A predicted immunity protein with an all alpha-helical fold and a conserved proline residue. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbour of the toxin gene, usually containing a domain of the Tox-REAse-1 or Tox-REase-6 families.


Pssm-ID: 434794  Cd Length: 214  Bit Score: 55.97  E-value: 2.50e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1954786967   1 EQEYNQAMEKALLAHKEYYS--DEERIGSRRGGLAIPLIALAIIAKDvKAYKLTVENGYIPAWL 62
Cdd:pfam15575 152 EEGFEEALLEALEAHREYWTadLEDRRLDPRGFLSLPLLALACLAYD-RGFELEVESPYLPKEL 214
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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