|
Name |
Accession |
Description |
Interval |
E-value |
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
3-1234 |
1.45e-20 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 99.07 E-value: 1.45e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 3 SDGDSASNTLSVQIVDDVPTAVSDVNLTVASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNP 82
Cdd:COG3210 209 LANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 83 NDGDFKALTGGGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGSDS 162
Cdd:COG3210 289 GASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGN 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 163 SKESTTVTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPTANG 242
Cdd:COG3210 369 GGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGG 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 243 NNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVMGADGAAIS 322
Cdd:COG3210 449 LTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNAT 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 323 QVVSSNGNSDSNPAGGFTVTGLYGTLTMGLDGEYSY--TLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRVP 400
Cdd:COG3210 529 SGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTAntLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSA 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 401 VLTIGNATVDEEGLPEGTAASGNSEIFNGSFTINTQGENLTTLTIGGQTYNLTSGGSQTLINNTEGMLTVTGVSGPTAGV 480
Cdd:COG3210 609 GATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTG 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 481 YTVNYTYTLKDNVLTHNVQGNSDTANGPSFVVSATDASGD-----SGTGNLQVVISDDAPIANAVTNAGQATQVQNTNLM 555
Cdd:COG3210 689 TTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDtvtfgNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTAS 768
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 556 -LILDISGSMGDPSGYQGMTRMQVMQKSALELLDKYSAYGSVMVNIVTFS---TSAANPTGVWVSVDVAKAIILGLTPTD 631
Cdd:COG3210 769 gTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGgtiTINTATTGLTGTGDTTSGAGGSNTTDT 848
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 632 STNYDDALNEAIKAFGDTGRLANAQNVSYFMSDGLPNASSLSGTPATVPDGNNSLGGGNGIDGDGTTLSGETKDWADFLT 711
Cdd:COG3210 849 TTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTG 928
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 712 ANNINSYALGMGSGATQSALDPIAYNGVSGASPANTTAVVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLN 791
Cdd:COG3210 929 GNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTAST 1008
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 792 AITVGGVTYTYNQKTDSAGVSGGTSVGTFNTATNEWTITLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDG 871
Cdd:COG3210 1009 TGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGA 1088
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 872 DTASSTLSIVINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNA 951
Cdd:COG3210 1089 GTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTA 1168
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 952 TPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGG 1031
Cdd:COG3210 1169 VAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAG 1248
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1032 AGNDTLNGGNGNDTASYFDSAAGVTVTVNGASQNTGGAGTDSLSNMENLVGSMFNDSLTGDGNANVLSGLAGNDILSGGG 1111
Cdd:COG3210 1249 SASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAV 1328
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1112 GDDLLIGGTGSDTLTGGAGKDTFKWMAGDAGGTDTIKDFTTGANGDVLDLSELLSGEHADASTLDHYLTFAPGPGSGKST 1191
Cdd:COG3210 1329 AAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSG 1408
|
1210 1220 1230 1240
....*....|....*....|....*....|....*....|...
gi 1994230699 1192 LTIDLDGAGSGTTTHTILFDNVDLTAGKSNLQIIQDLLDQGNL 1234
Cdd:COG3210 1409 TGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGG 1451
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
7-1233 |
1.01e-19 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 95.99 E-value: 1.01e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 7 SASNTLSVQIVDDVPTAVSDVNLTVASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNPNDGD 86
Cdd:COG3210 115 TLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGV 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 87 FKALTGGGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGSDSSKES 166
Cdd:COG3210 195 TGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIG 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 167 TTVTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPTANGNNSL 246
Cdd:COG3210 275 TTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGT 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 247 FEDFAVSLVDSDGDSASNTLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVMGADGAAISQVVS 326
Cdd:COG3210 355 TGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLG 434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 327 SNGNSDSNPAGGFTVTGLYGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRVPVLTIGN 406
Cdd:COG3210 435 ITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGL 514
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 407 ATVDEEGLPEGTAASGNSEIFNGSFTINTQGENLTTLTIGGQTYNLTSGGSQTLINNTEGMLTVTGVSGPTAGVYTVNYT 486
Cdd:COG3210 515 TGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGT 594
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 487 YTLKDNVLTHNVQGNSDTANGPSFVVSATDASGDSGTGNLQVVISDDAPIANAVTNAGQATQVQNTNLMLILDISGSMGD 566
Cdd:COG3210 595 NSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGT 674
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 567 PSGYQGMTRMQVMQKSALELLDKYSAYGSVMVNIVTFSTSAANPTGVWVSVDVAKAIILGLTPTDSTNYDDALNEAIKAF 646
Cdd:COG3210 675 TGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTGATLTLNAGVTITSGNA 754
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 647 GDtgrlanaqnvsyfMSDGLPNASSLSGTPATVPDGNNSLGGGNGIDGDGTTLSGETKDWADFLTANNINSYALGMGSGA 726
Cdd:COG3210 755 GT-------------LSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTI 821
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 727 TQSAldpiAYNGVSGASPANTTAVVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLNAITVGGVTYTYNQKT 806
Cdd:COG3210 822 TINT----ATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLT 897
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 807 DSAGVSGGTSVGTFNTATNEWTITLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLSIVINPAV 886
Cdd:COG3210 898 NLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAV 977
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 887 GPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNSYEGSFNYTNST 966
Cdd:COG3210 978 GTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGN 1057
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 967 TTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGGNGNDTA 1046
Cdd:COG3210 1058 AAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTAST 1137
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1047 SYFDSAAGVTVTVNGASQNTGGAGTDSLSNMENLVGSMFNDSLTGDGNANVLSGLAGNDILSGGGGDDLLIGGTGSDTLT 1126
Cdd:COG3210 1138 EAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVT 1217
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1127 GGAGKDTFKWMAGDAGGTDTIKDFTTGANGDVLDLSELLSGEHADASTLDHYLTFAPGPGSGKSTLTIDLDGAGSGTTTH 1206
Cdd:COG3210 1218 TTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAG 1297
|
1210 1220
....*....|....*....|....*..
gi 1994230699 1207 TILFDNVDLTAGKSNLQIIQDLLDQGN 1233
Cdd:COG3210 1298 GSLDTTGNTAGANGATVGTGIGGTTAT 1324
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
2-1236 |
1.51e-18 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 92.14 E-value: 1.51e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 2 DSDGDSASNTLSVQIVDDVPTAVSDVNLTVASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLN 81
Cdd:COG3210 240 VISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAG 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 82 PNDGDFKALTGGGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGSD 161
Cdd:COG3210 320 ITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTV 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 162 SSKESTTVTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPTAN 241
Cdd:COG3210 400 LGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNT 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 242 GNNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVMGADGAAI 321
Cdd:COG3210 480 TSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAAS 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 322 SQVVSSNGNSDSNPAGGFTVTGLYGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRVPV 401
Cdd:COG3210 560 GSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAV 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 402 LTIGNATVDEEGLPEGTAASGNSEIFNGSFTINTQGENLTTLTIGGQTYNLTSGGSQTLINNTEGMLTVTGVSGPTAGVY 481
Cdd:COG3210 640 GAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQI 719
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 482 TVNYTYTLKDNVLTHNVQGNSDTANGPSFVVSATDASGDSGTGNLQVVISDDAPIANAVTNAGQATQVQNTNLMLILDIS 561
Cdd:COG3210 720 GALANANGDTVTFGNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDIT 799
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 562 GSMGDPSGyqGMTRMQVMQKSALELLDKYSAYGSVMVNIVTFSTSAANPTGVWVSVDVAKAIILGLTPTDSTNYDDALNE 641
Cdd:COG3210 800 ADGTITAA--GTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASI 877
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 642 AIKAFGDTGRLANAQNVSYFMSDGLPNASSLSGTPATVPDGNNSLGGGNGIDGDGTTLSGETKDWADFLTANNINSYALG 721
Cdd:COG3210 878 TVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAA 957
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 722 MGSGATQSALDPIAYNGVSGASPANTTAVVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLNAITVGGVTYT 801
Cdd:COG3210 958 SASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTA 1037
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 802 YNQKTDSAGVSGGTSVGTFNTATNEWTITLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLSIV 881
Cdd:COG3210 1038 ATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVT 1117
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 882 INPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNSYEGSFN 961
Cdd:COG3210 1118 ASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTD 1197
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 962 YTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGGN 1041
Cdd:COG3210 1198 LKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNA 1277
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1042 GNDTASYFDSAAGVTVTVNGASQNTGGAGTDSLSNMENLVGSMFNDSLTGDGNANVLSGLAGNDILSGGGGDDLLIGGTG 1121
Cdd:COG3210 1278 GATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNG 1357
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1122 SDTLTGGAGKDTFKWMAGDAGGTDTIKDFTTGANGDVLDLSELLSGEHADASTLDHYLTFAPGPGSGKSTLTIDLDGAGS 1201
Cdd:COG3210 1358 ATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGT 1437
|
1210 1220 1230
....*....|....*....|....*....|....*
gi 1994230699 1202 GTTTHTILFDNVDLTAGKSNLQIIQDLLDQGNLKV 1236
Cdd:COG3210 1438 GNTTGTSVAGAGGGNADASAINTGNASSLGAGGST 1472
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
3-955 |
2.09e-14 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 78.65 E-value: 2.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 3 SDGDSASNTLSVQIVDDVPTAVSDVNLTVASENNLVLNGNVITNDVQGA---DGAAVTAGTLSGTYGSLVLNANGTYTYT 79
Cdd:COG3210 753 NAGTLSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDITADgtiTAAGTTAINVTGSGGTITINTATTGLTG 832
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 80 LNPNDGDFKALTGGGVGSevftytltdaDGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAG 159
Cdd:COG3210 833 TGDTTSGAGGSNTTDTTT----------GTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTT 902
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 160 SDSSKESTTVTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPT 239
Cdd:COG3210 903 TNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSAN 982
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 240 ANGNNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVMGADGA 319
Cdd:COG3210 983 SAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALT 1062
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 320 AISQVVSSNGNSDSNPAGGFTVTGLYGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRV 399
Cdd:COG3210 1063 ASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGA 1142
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 400 PVLTIGNATVDEEGLPEGTAASGNSEIFNGSFTINTQGENLTTLTIGGQTYNLTSGGSQTLINNTEGMLTVTGVSGPTAG 479
Cdd:COG3210 1143 GTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTL 1222
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 480 VYTVNYTYTLKDNVLTHNVQGNSDTANGPSFVVSATDASGDSGTGNLQVVISDDAPIANAVTNAGQATQVQNTNLMLILD 559
Cdd:COG3210 1223 TASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDT 1302
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 560 ISGSMGDPSGYQGMTRMQVMQKSALELLDKYSAYGSVMVNIVTFSTSAANPTGVWVSVDVAKAIILGLTPTDSTNYDDAL 639
Cdd:COG3210 1303 TGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGT 1382
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 640 NEAIKAFGDTGRLANAQNVSYFMSDGLPNASSLSGTPATVPDGNNSLGGGNGIDGDGTTLSGETKDWADFLTANNINSYA 719
Cdd:COG3210 1383 VLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGN 1462
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 720 LGMGSGATQSALDPIAYNGVSGASPANTTAVVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLNAITVGGVT 799
Cdd:COG3210 1463 ASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTG 1542
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 800 YTYNQKTDSAGVSGGTSVGTFNTATNEWTITLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLS 879
Cdd:COG3210 1543 GGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGN 1622
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1994230699 880 IVINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNS 955
Cdd:COG3210 1623 AGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLGGATTAAAGNVATGDTAP 1698
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
862-1106 |
4.70e-14 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 73.40 E-value: 4.70e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 862 VGYSVIDNDGDTASSTLSIVINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGS 941
Cdd:COG2931 3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 942 VSFDDTSGNATPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNG 1021
Cdd:COG2931 83 GGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1022 GEGNDLLIGGAGNDTLNGGNGNDTASYFDSAAGVTVTVNGASQNTGGAGTDSLSNMENLVGSMFNDSLTGDGNANVLSGL 1101
Cdd:COG2931 163 GAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGG 242
|
....*
gi 1994230699 1102 AGNDI 1106
Cdd:COG2931 243 GGGGD 247
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
869-1127 |
8.01e-14 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 73.02 E-value: 8.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 869 NDGDTASSTLSIVINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTS 948
Cdd:COG2931 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 949 GNATPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLL 1028
Cdd:COG2931 81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1029 IGGAGNDTLNGGNGNDTAsYFDSAAGVTVTVNGASQNTGGAGTDSLSnmenlvGSMFNDSLTGDGNANVLSGLAGNDILS 1108
Cdd:COG2931 161 YGGAGNDTLDGGAGNDTL-TGGAGNDTLTGGAGNDTLDGGGGDDTLG------GGGGDDGLDGGDGDDGLGGGGGDDTLG 233
|
250
....*....|....*....
gi 1994230699 1109 GGGGDDLLIGGTGSDTLTG 1127
Cdd:COG2931 234 GGGGGDGGGGGGGDDGLGG 252
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
261-1233 |
1.91e-12 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 72.11 E-value: 1.91e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 261 SASNTLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVMGADGAAISQVVSSNGNSDSNPAGGFT 340
Cdd:COG3210 2 SGGLAGTTGNKTIGVDIAVTTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGGI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 341 VTGLYGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRVPVLTIGNATVDEEGLPEGTAA 420
Cdd:COG3210 82 GAAAANTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 421 SGNSEIFNGSFTINTQGENLTTLTIGGQTYNLTSGGSQTLINNTEGMLTVTGVSGPTAGVYTVNYTYTLKDNVLTHNVQG 500
Cdd:COG3210 162 TNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 501 NSDTANGPSFVVSATDASG--DSGTGNLQVVISDDAPIANAVTNAGQATQVQNTNLMLILDISGSMGDPSGYQGMTRMQV 578
Cdd:COG3210 242 STGGTDISSLSVAAGAGTGgaGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGIT 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 579 MQKSALELLDKYSAYGSVMVNIVTFSTSAANPTGVWVSVDVAKAIILGLTPTDSTNYDDALNEAIKAFGDTGRLANAQNV 658
Cdd:COG3210 322 TTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLG 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 659 SYFMSDGLPNASSLSGTPATVPDGNNSLGGGNGIDGDGTTLSGETkdwADFLTANNINSYALGMGSGATQSALDPIAYNG 738
Cdd:COG3210 402 SGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTI---GGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGN 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 739 VSGASPANTTAVVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLNAITVGGVTYTYNQKTDSAGVSGGTSVG 818
Cdd:COG3210 479 TTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAA 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 819 TFNTATNEWTITLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLSIVINPAVGPTVVRDDFIIT 898
Cdd:COG3210 559 SGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSA 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 899 NQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNSYEGSFNYTNSTTTDTAKVYVDVQ 978
Cdd:COG3210 639 VGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQ 718
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 979 SGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLiggAGNDTLNGGNGNDTASYFDSAAG---- 1054
Cdd:COG3210 719 IGALANANGDTVTFGNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTAS---GTTLTLANANGNTSAGATLDNAGaeis 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1055 VTVTVNGASQNTGGAGTDSLSNMENLVGSMFNDSLTGDGNANVLSGLAGNDILSGGGGDDLLIGGTGSDTLTGGAGKDTF 1134
Cdd:COG3210 796 IDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAA 875
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1135 KWMAGDAGGTDTIKDFTTGANGDVLDLSELLSGEHADASTLDHYLTFAPGPGSGKSTLTIDLDGAGSGTTTHTILFDNVD 1214
Cdd:COG3210 876 SITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLS 955
|
970
....*....|....*....
gi 1994230699 1215 LTAGKSNLQIIQDLLDQGN 1233
Cdd:COG3210 956 AASASDGAGDTGASSAAGS 974
|
|
| ChlD |
COG1240 |
vWFA (von Willebrand factor type A) domain of Mg and Co chelatases [Coenzyme transport and ... |
532-673 |
5.61e-12 |
|
vWFA (von Willebrand factor type A) domain of Mg and Co chelatases [Coenzyme transport and metabolism];
Pssm-ID: 440853 [Multi-domain] Cd Length: 262 Bit Score: 67.66 E-value: 5.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 532 DDAPIANAVTNAGQATQVQNTNLMLILDISGSMGdpsgyqGMTRMQVMQKSALELLDKYSAYGSVMVniVTFSTSA---A 608
Cdd:COG1240 73 LLLLLALALAPLALARPQRGRDVVLVVDASGSMA------AENRLEAAKGALLDFLDDYRPRDRVGL--VAFGGEAevlL 144
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1994230699 609 NPTGvwvSVDVAKAIILGLTPTDSTNYDDALNEAIKAFGDTGRlaNAQNVSYFMSDGLPNASSLS 673
Cdd:COG1240 145 PLTR---DREALKRALDELPPGGGTPLGDALALALELLKRADP--ARRKVIVLLTDGRDNAGRID 204
|
|
| T1SS_VCA0849 |
TIGR03661 |
type I secretion C-terminal target domain (VC_A0849 subclass); This model represents a ... |
1145-1235 |
8.21e-12 |
|
type I secretion C-terminal target domain (VC_A0849 subclass); This model represents a C-terminal domain associated with secretion by type 1 secretion systems (T1SS). Members of this subclass do not include the RtxA toxin of Vibrio cholerae and its homologs, although the two classes of proteins share large size, occurrence in genomes with T1SS, regions with long tandem repeats, and regions with the glycine-rich repeat modeled by pfam00353. [Cellular processes, Pathogenesis]
Pssm-ID: 274707 Cd Length: 88 Bit Score: 62.36 E-value: 8.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1145 DTIKDFTTGAngDVLDLSELLSGEHADASTLDHYLTFAPGPGSGKSTLTIDLDG-AGSGTTTHTILFDNVDLTAgkSNLQ 1223
Cdd:TIGR03661 1 DTITDFTLGE--DKLDLSDLLSGEGVSSANLDQYLNVTTSGEDGNTVISVDSDGsAGSAAVTQTITLEGVDLSS--TSAD 76
|
90
....*....|..
gi 1994230699 1224 IIQDLLDQGNLK 1235
Cdd:TIGR03661 77 IINQLLDNNQLI 88
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
315-1237 |
5.79e-11 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 67.48 E-value: 5.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 315 GADGAAISQVVSSNGNSDSNPAGGFTVTGLYGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIA 394
Cdd:COG3210 7 GTTGNKTIGVDIAVTTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGGIGAAAA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 395 QDTRVPVLTIGNATVDEEGLPEGTAASGNSEIFNGSFTINTQGENLTTLTIGGQTYNLTSGGSQTLINNTEGmlTVTGVS 474
Cdd:COG3210 87 NTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGA--GNNTNT 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 475 GPTAGVYTVNYTYTLKDNVLTHNVQGNSDTANGPSFVVSATDASGDSGTGNLQVVISDDAPIANAVTNAGQATQVQNTNL 554
Cdd:COG3210 165 NNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 555 MLILDISGSMGDPSGYQGMTRMQVMQKSALELLDKYSAYGSVMVNIVTFSTSAANPTGVWVSVDVAKAIILGLTPTDSTN 634
Cdd:COG3210 245 GTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTN 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 635 YDDALNEAIKAFGDTGRLANAQNVSYFMSDGLPNASSLSGTPATVpdGNNSLGGGNGIDGDGTTLSGETKDWADFLTANN 714
Cdd:COG3210 325 TVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNG--GGLTTAGAGTVASTVGTATASTGNASSTTVLGS 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 715 INSYALGMGSGATQSALDPIAYNGVSGASPANTTAVVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLNAIT 794
Cdd:COG3210 403 GSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSA 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 795 VGGVTYTYNQKTDSAGVSGGTSVGTFNTATNEWTITLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTA 874
Cdd:COG3210 483 TTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSN 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 875 SSTLSIVINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPN 954
Cdd:COG3210 563 TANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAA 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 955 SYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNdTLNGGEGNDLLIGGAGN 1034
Cdd:COG3210 643 LSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGN-TLTISTGSITVTGQIGA 721
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1035 dtlNGGNGNDTASYFDSAAGVTVTVN-GASQNTGGAGTDSLSNMENLVGSMFNDSLTG-DGNANVLSGLAGNDIL---SG 1109
Cdd:COG3210 722 ---LANANGDTVTFGNLGTGATLTLNaGVTITSGNAGTLSIGLTANTTASGTTLTLANaNGNTSAGATLDNAGAEisiDI 798
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1110 GGGDDLLIGGTGSDTLTGGAGKDTFKWMAGDAGGTDTIKDFTTGANGDVLDLSELLSGEHADASTLDHYLTFAPGPGSGK 1189
Cdd:COG3210 799 TADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASIT 878
|
890 900 910 920
....*....|....*....|....*....|....*....|....*...
gi 1994230699 1190 STLTIDLDGAGSGTTTHTILFDNVDLTAGKSNLQIIQDLLDQGNLKVD 1237
Cdd:COG3210 879 VGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGL 926
|
|
| vWFA |
cd00198 |
Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation ... |
553-743 |
2.16e-09 |
|
Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.
Pssm-ID: 238119 [Multi-domain] Cd Length: 161 Bit Score: 57.58 E-value: 2.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 553 NLMLILDISGSMGDpsgyqgmTRMQVMQKSALELLDKYSAYGS-VMVNIVTFSTSA---ANPTGVWVSVDVAKAII-LGL 627
Cdd:cd00198 2 DIVFLLDVSGSMGG-------EKLDKAKEALKALVSSLSASPPgDRVGLVTFGSNArvvLPLTTDTDKADLLEAIDaLKK 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 628 TPTDSTNYDDALNEAIKAFGDTGRlANAQNVSYFMSDGLPNASSLSGTPAtvpdgnnslgggngidgdgttlsgetkdwA 707
Cdd:cd00198 75 GLGGGTNIGAALRLALELLKSAKR-PNARRVIILLTDGEPNDGPELLAEA-----------------------------A 124
|
170 180 190
....*....|....*....|....*....|....*.
gi 1994230699 708 DFLTANNINSYALGMGSGATQSALDPIAYNGVSGAS 743
Cdd:cd00198 125 RELRKLGITVYTIGIGDDANEDELKEIADKTTGGAV 160
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
1077-1164 |
4.63e-09 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 58.15 E-value: 4.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1077 MENLVGSMFNDSLTGDGNANVLSGLAGNDILSGGGgddlliggtGSDTLTGGAGKDTFKWMAGD---AGGTDTIKDFTTG 1153
Cdd:pfam08548 81 IENAIGGSGNDVLIGNDADNILKGGAGNDILYGGG---------GADQLWGGAGNDIFVYASAKdslTAAPDTIRDFVSG 151
|
90
....*....|.
gi 1994230699 1154 AngDVLDLSEL 1164
Cdd:pfam08548 152 I--DKIDLSAL 160
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
712-1205 |
1.34e-08 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 59.41 E-value: 1.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 712 ANNINSYALGMGSGATQSALDPIAYNGVSGASPANTTAVVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLN 791
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 792 AITVGGVTYTYNQKTDSAGVSGGTSVGTFNTATNEWTITLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDG 871
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 872 DTASSTLSIVINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNA 951
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 952 TPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGG 1031
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1032 AGNDTLNGGNGNDTASYFDSAAGVTVTVNGASQNTGGAGTDSLSNMENLVGSmfndsLTGDGNANVLSGLAGNDILSGGG 1111
Cdd:COG4625 321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGG-----GGGGSGGGGAGGGGGSGGGGGGG 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1112 GDDLLIGGTGSDTLTGGAGKDTFKWMAGDAGGTDTIKDFTTGANGDVLDLSELLSGEHADASTLDHYLTFAPGPGSGKST 1191
Cdd:COG4625 396 AGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGT 475
|
490
....*....|....
gi 1994230699 1192 LTIDLDGAGSGTTT 1205
Cdd:COG4625 476 LTLTGNNTYTGTTT 489
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
721-1158 |
2.46e-08 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 58.42 E-value: 2.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 721 GMGSGATQSALDPIAYNGVSGASPANTTAVVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLNAITVGGVTY 800
Cdd:COG3468 6 GGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 801 TYNQKTDSAGVSGGTSVGTFNTATNEWTITLAGGILKVDMDNGAYTYTpptsipvGGINQVVGYSVIDNDGDTASSTLSI 880
Cdd:COG3468 86 GNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGT-------GSAGGGGGGGGGGTGVGGTGAAAAG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 881 VINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNSYEGSF 960
Cdd:COG3468 159 GGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 961 NYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGG 1040
Cdd:COG3468 239 GGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1041 NGNDTASYFDSAAGVTVTVNGASQNTGGAGTDSLSNMENLVGSMFNDSLTGDGNANVLSGLAGNDILSGGGGDDLLIGGT 1120
Cdd:COG3468 319 GSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTG 398
|
410 420 430
....*....|....*....|....*....|....*...
gi 1994230699 1121 GSDTLTGGAGKDTFKWMAGDAGGTDTIKDFTTGANGDV 1158
Cdd:COG3468 399 GTGNNGGGGVGGGGGGGLTLTGGTLTVNGNYTGNNGTL 436
|
|
| VWA |
smart00327 |
von Willebrand factor (vWF) type A domain; VWA domains in extracellular eukaryotic proteins ... |
553-735 |
2.82e-08 |
|
von Willebrand factor (vWF) type A domain; VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.
Pssm-ID: 214621 [Multi-domain] Cd Length: 175 Bit Score: 54.77 E-value: 2.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 553 NLMLILDISGSMGDpsgyqgmTRMQVMQKSALELLDKYSAYG-SVMVNIVTFSTSAANPTGVWV--SVDVAKAIILGLTP 629
Cdd:smart00327 1 DVVFLLDGSGSMGG-------NRFELAKEFVLKLVEQLDIGPdGDRVGLVTFSDDARVLFPLNDsrSKDALLEALASLSY 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 630 TDS--TNYDDALNEAIKAFGDT--GRLANAQNVSYFMSDGLPNasslsgtpatvpdgnnslgggngidgdgtTLSGETKD 705
Cdd:smart00327 74 KLGggTNLGAALQYALENLFSKsaGSRRGAPKVVILITDGESN-----------------------------DGPKDLLK 124
|
170 180 190
....*....|....*....|....*....|
gi 1994230699 706 WADFLTANNINSYALGMGSGATQSALDPIA 735
Cdd:smart00327 125 AAKELKRSGVKVFVVGVGNDVDEEELKKLA 154
|
|
| YfbK |
COG2304 |
Secreted protein containing bacterial Ig-like domain and vWFA domain [General function ... |
545-669 |
1.43e-07 |
|
Secreted protein containing bacterial Ig-like domain and vWFA domain [General function prediction only];
Pssm-ID: 441879 [Multi-domain] Cd Length: 289 Bit Score: 54.72 E-value: 1.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 545 QATQVQNTNLMLILDISGSMGDpsgyqgmTRMQVMQKSALELLDKYSAygSVMVNIVTFSTSA--ANPTGVWVSVDVAKA 622
Cdd:COG2304 85 AAEERPPLNLVFVIDVSGSMSG-------DKLELAKEAAKLLVDQLRP--GDRVSIVTFAGDArvLLPPTPATDRAKILA 155
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1994230699 623 IILGLTPTDSTNYDDALNEAIKAFGDTGRlANAQNVSYFMSDGLPNA 669
Cdd:COG2304 156 AIDRLQAGGGTALGAGLELAYELARKHFI-PGRVNRVILLTDGDANV 201
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
812-1093 |
2.32e-07 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 53.37 E-value: 2.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 812 SGGTSVGTFNTATNEWTITLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLSIVINPAVGPTVV 891
Cdd:COG2931 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 892 RDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNatpnsyegsfnytnstttdta 971
Cdd:COG2931 81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGN--------------------- 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 972 kvyvdvqsgSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGGNGNDTASYFDS 1051
Cdd:COG2931 140 ---------DTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGG 210
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1994230699 1052 AAGVTVTVNGASQNTGGAGTDSLSNMENLVGSMFNDSLTGDG 1093
Cdd:COG2931 211 DDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGGGGGDDGLGG 252
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1012-1045 |
2.51e-07 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 47.82 E-value: 2.51e-07
10 20 30
....*....|....*....|....*....|....
gi 1994230699 1012 GGLGNDTLNGGEGNDLLIGGAGNDTLNGGNGNDT 1045
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDT 35
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
993-1028 |
2.68e-07 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 47.82 E-value: 2.68e-07
10 20 30
....*....|....*....|....*....|....*.
gi 1994230699 993 IGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLL 1028
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
993-1106 |
6.55e-07 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 51.60 E-value: 6.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 993 IGGSGNDTLNGNAGNDILlgglgndtlNGGEGNDLLIGGAGNDTLNGGNGNDTASYFDSAAGVTVTVNGASQNTGGAGTD 1072
Cdd:pfam08548 85 IGGSGNDVLIGNDADNIL---------KGGAGNDILYGGGGADQLWGGAGNDIFVYASAKDSLTAAPDTIRDFVSGIDKI 155
|
90 100 110
....*....|....*....|....*....|....*
gi 1994230699 1073 SLSNMENLV-GSMFNDSLTGDGNANVLSGLAGNDI 1106
Cdd:pfam08548 156 DLSALNNNSdGLQFVDRFSGKAGEALLRYNEVSNI 190
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
1003-1037 |
6.81e-07 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 46.66 E-value: 6.81e-07
10 20 30
....*....|....*....|....*....|....*
gi 1994230699 1003 GNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTL 1037
Cdd:pfam00353 2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
601-1128 |
1.10e-06 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 53.24 E-value: 1.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 601 VTFSTSAANPTGVWVSVDVAKAIILGLTPTDSTNYDDALNEAIKAFGDTGRLANAQNVSYFMSDGLPNASSLSGTPATVP 680
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 681 DGNNSLGGGNGIDGDGTTLSGETKDWADFLTANNINSYALGMGSGATQSALDPIAYNGVSGASPANTTAVVVTDFSQLTA 760
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 761 TLLSTVVAPPLAGQLINGVAASAGADGGWLNAITVGGVTYTYNQKTDSAGVSGGTSVGTFNTATNEwTITLAGGILKVDM 840
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGG-GGGGGGGGGGGGG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 841 DNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLSIVINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAA 920
Cdd:COG4625 240 GGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 921 TQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDT 1000
Cdd:COG4625 320 GGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGG 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1001 LNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGGNGNDTASYFDSAAGVTVTVNGASQNTGGAGTDSLSNMENL 1080
Cdd:COG4625 400 GGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLT 479
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 1994230699 1081 VGSMFNDSLTGDGNANVLSGLAGNDILSGGGGDDLLIGGTGSDTLTGG 1128
Cdd:COG4625 480 GNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGG 527
|
|
| TerY |
COG4245 |
Uncharacterized conserved protein YegL, contains vWA domain of TerY type [Function unknown]; |
550-740 |
1.30e-06 |
|
Uncharacterized conserved protein YegL, contains vWA domain of TerY type [Function unknown];
Pssm-ID: 443387 [Multi-domain] Cd Length: 196 Bit Score: 50.31 E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 550 QNTNLMLILDISGSM-GDP-----SGYQGMTRmqvmqksalELLDKYSAYGSVMVNIVTFSTSAAnptgvWVS--VDVAK 621
Cdd:COG4245 4 RRLPVYLLLDTSGSMsGEPiealnEGLQALID---------ELRQDPYALETVEVSVITFDGEAK-----VLLplTDLED 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 622 AIILGLTPTDSTNYDDALNEAIKAFGDTGRLANAQNVSY------FMSDGLPNASSlsgtpatvpdgnnslgggngidgd 695
Cdd:COG4245 70 FQPPDLSASGGTPLGAALELLLDLIERRVQKYTAEGKGDwrpvvfLITDGEPTDSD------------------------ 125
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1994230699 696 gttLSGETKDWADFLTANNINSYALGMGSGATQSALDPIAYNGVS 740
Cdd:COG4245 126 ---WEAALQRLKDGEAAKKANIFAIGVGPDADTEVLKQLTDPVRA 167
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
697-1104 |
1.79e-06 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 52.26 E-value: 1.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 697 TTLSGETKDWADFLTANNINSYALGMGSGATQSALDPIAYNGVSGASPANTTAVVVTDFSQLTATLLSTVVAPPLAGQLI 776
Cdd:COG3468 21 GGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGG 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 777 NGVAASAGADGGWLNAITVGGVTYTYNQKTDSAGVSGGTSVGTFNTATNEWTITLAGGILKVDMDNGAYTYTPPTSIPVG 856
Cdd:COG3468 101 TGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGGGAGGGGGG 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 857 GINQVVGYSVIDNDGDTASSTLSIVINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQMITSVSGAVGGTVT 936
Cdd:COG3468 181 GAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAAG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 937 DNAGSVSFDDTSGNATPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGN 1016
Cdd:COG3468 261 TGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGG 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1017 DTLNGGEGNDLLIGGAGNDTLNGGNGNDTASYFDSAAGVTVTVNGASQNTGGAGTDSLSNMENLVGSMFNDSLTGDGNAN 1096
Cdd:COG3468 341 TTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTG 420
|
....*...
gi 1994230699 1097 VLSGLAGN 1104
Cdd:COG3468 421 GTLTVNGN 428
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
914-1199 |
2.27e-06 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 50.67 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 914 DTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILI 993
Cdd:COG2931 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 994 GGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGGNGNDTasyfdsaagvtvtvngasqntggagtds 1073
Cdd:COG2931 81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDT---------------------------- 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1074 lsnmenLVGSMFNDSLTGDGNANVLSGLAGNDILSGGGGDDLLIGGTGSDTLTGGAGKDTFKWMAGDAGGTDTIKDFTTG 1153
Cdd:COG2931 133 ------LYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLG 206
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1994230699 1154 ANGDVLDLSELLSGEHADASTLDHYLTFAPGPGSGKSTLTIDLDGA 1199
Cdd:COG2931 207 GGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGGGGGDDGLGG 252
|
|
| VWA_2 |
pfam13519 |
von Willebrand factor type A domain; |
554-656 |
4.12e-06 |
|
von Willebrand factor type A domain;
Pssm-ID: 463909 [Multi-domain] Cd Length: 103 Bit Score: 46.52 E-value: 4.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 554 LMLILDISGSMGdpSGYQGMTRMQVMQKSALELLdkySAYGSVMVNIVTFSTSAA---NPTGvwvSVDVAKAIILGLTPT 630
Cdd:pfam13519 1 LVFVLDTSGSMR--NGDYGPTRLEAAKDAVLALL---KSLPGDRVGLVTFGDGPEvliPLTK---DRAKILRALRRLEPK 72
|
90 100
....*....|....*....|....*..
gi 1994230699 631 -DSTNYDDALNEAIKAFGDTGRLANAQ 656
Cdd:pfam13519 73 gGGTNLAAALQLARAALKHRRKNQPRR 99
|
|
| Cadherin_4 |
pfam17803 |
Bacterial cadherin-like domain; This entry contains numerous bacterial cadherin-like domains ... |
11-78 |
7.59e-06 |
|
Bacterial cadherin-like domain; This entry contains numerous bacterial cadherin-like domains found in extracelullar proteins.
Pssm-ID: 465514 [Multi-domain] Cd Length: 71 Bit Score: 44.87 E-value: 7.59e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1994230699 11 TLSVQIVDDVPTAVSDVnLTVASENNLVLNGNVITNDV-QGADGAAVTAGTLSGTYGSLVLNANGTYTY 78
Cdd:pfam17803 4 TITVTGVNDAPVAVDDT-ATVDEDTPVTITGNVLANDTdVDGDTLTVTSVTGAPAYGTLTLNADGSFTY 71
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
7-109 |
9.06e-06 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 45.41 E-value: 9.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 7 SASNTLSVQIVDDVPTAVSDVnlTVASENNLVLNGNVITNDVQGADGAAVTAGTlSGTYGSLVLNANGTYTYTLNPNDgd 86
Cdd:pfam17963 1 TATVTVTVTPVNDAPVAVDDS--VTVTEDTVLANDSDPDGDPLTITSLTVTIVT-APANGTVTVNADGTLTYTPNAGF-- 75
|
90 100
....*....|....*....|...
gi 1994230699 87 fkaltgggVGSEVFTYTLTDADG 109
Cdd:pfam17963 76 --------SGTDSFTYTVSDGSG 90
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
590-1068 |
2.70e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 48.62 E-value: 2.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 590 YSAYGSVMVNIVTFSTSAANPTGVWVSVDVAKAIILGLTPTDSTNYDDALNEAIKAFGDTGRLANAQNVSYFMSDGLPNA 669
Cdd:COG4625 49 GAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGG 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 670 SSLSGTPATVPDGNNSLGGGNGIDGDGTTLSGETKDWADFLTANNINSYALGMGSGATQSALDPIAYNGVSGASPANTTA 749
Cdd:COG4625 129 AGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGG 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 750 VVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLNAITVGGVTYTYNQKTDSAGVSGGTSVGTFNTATNEWTI 829
Cdd:COG4625 209 GGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSG 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 830 TLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLSIVINPAVGPTVVRDDFIITNQDPATIPDWA 909
Cdd:COG4625 289 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGG 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 910 LLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLD 989
Cdd:COG4625 369 GGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGG 448
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1994230699 990 EILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGGNGNDTASYFDSAAGVTVTVNGASQNTGG 1068
Cdd:COG4625 449 GGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGG 527
|
|
| COG2931 |
COG2931 |
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ... |
959-1205 |
3.07e-05 |
|
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442175 [Multi-domain] Cd Length: 252 Bit Score: 47.21 E-value: 3.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 959 SFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLN 1038
Cdd:COG2931 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1039 GGNGNDTASYFDSAAGVTVTVNGASQNTGGAGTDSLSNMEN--LVGSMFNDSLTGDGNANVLSGLAGNDILSGGGGDDLL 1116
Cdd:COG2931 81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNdtLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1117 IGGTGSDTLTGGAGKDTFKWMAGDAGGTDTIKDFTTGANGDVLDLSELLSGEHADASTLDHYLTFAPGPGSGKSTLTIDL 1196
Cdd:COG2931 161 YGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDG 240
|
....*....
gi 1994230699 1197 DGAGSGTTT 1205
Cdd:COG2931 241 GGGGGGDDG 249
|
|
| HemolysinCabind |
pfam00353 |
RTX calcium-binding nonapeptide repeat (4 copies); |
984-1019 |
4.11e-05 |
|
RTX calcium-binding nonapeptide repeat (4 copies);
Pssm-ID: 459777 [Multi-domain] Cd Length: 36 Bit Score: 41.65 E-value: 4.11e-05
10 20 30
....*....|....*....|....*....|....*.
gi 1994230699 984 TGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDTL 1019
Cdd:pfam00353 1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
|
|
| T1SS_rpt_143 |
TIGR03660 |
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur ... |
226-279 |
4.66e-05 |
|
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur singly or in up to 23 tandem repeats in very large proteins in the genus Vibrio, and in related species such as Legionella pneumophila, Photobacterium profundum, Rhodopseudomonas palustris, Shewanella pealeana, and Aeromonas hydrophila. Proteins with these domains represent a subset of a broader set of proteins with a particular signal for type 1 secretion, consisting of several glycine-rich repeats modeled by pfam00353, followed by a C-terminal domain modeled by TIGR03661. Proteins with this domain tend to share several properties with the RtxA (Repeats in Toxin) protein of Vibrio cholerae, including a large size often containing tandemly repeated domains and a C-terminal signal for type 1 secretion. [Cellular processes, Pathogenesis]
Pssm-ID: 132699 [Multi-domain] Cd Length: 137 Bit Score: 44.58 E-value: 4.66e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1994230699 226 SYSYTLNDNEAHPTanGNNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTAND 279
Cdd:TIGR03660 67 SYEFTLEGPLDHAA--GSDELTLNFPIIATDFDGDTSSITLPVTIVDDVPTITD 118
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
594-1074 |
5.05e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 47.85 E-value: 5.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 594 GSVMVNIVTFSTSAANPTGVWVSVDVAKAIILGLTPTDSTNYDDALNEAIKAFGDTGRLANAQNVSYFMSDGLPNASSLS 673
Cdd:COG4625 28 AGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGG 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 674 GTPATVPDGNNSLGGGNGIDGDGTTLSGETKDWADFLTANNINSYALGMGSGATQSALDPIAYNGVSGASPANTTAVVVT 753
Cdd:COG4625 108 GGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGG 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 754 DFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLNAITVGGVTYTYNQKTDSAGVSGGTSVGTFNTATNEWT----- 828
Cdd:COG4625 188 GGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGgaggg 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 829 --ITLAGGILKVDMDNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLSIVINPAVGPTVVRDDFIITNQDPATIP 906
Cdd:COG4625 268 ggGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGG 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 907 DWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGS 986
Cdd:COG4625 348 GGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGT 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 987 YLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGGNGNDTASYFDSAAGVTVTVNGASQNT 1066
Cdd:COG4625 428 GAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVE 507
|
....*...
gi 1994230699 1067 GGAGTDSL 1074
Cdd:COG4625 508 VDAANSDR 515
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
89-534 |
1.80e-04 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 46.09 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 89 ALTGGGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGSDSSKESTT 168
Cdd:COG3468 3 SGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 169 VTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTplGNTLTITGYNPATGLVSYSYTLNDNEAHPTANGNNSLFE 248
Cdd:COG3468 83 GTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGG--GGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 249 DFAVSLVDSDGDSASNTLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVMGADGAAISQVVSSN 328
Cdd:COG3468 161 TGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 329 GNSDSNPAGGFTVTGLYGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRVPVLTIGNAT 408
Cdd:COG3468 241 GGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 409 VDEEGLPEGTAASGNSEIFNGSFTINTQGENLTTLTIGGQTYNLTSGGSQTLINNTEGMLTVTGVSGPTAGVYTVNYTYT 488
Cdd:COG3468 321 NAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGT 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1994230699 489 LKDNVLTHNVQGNSDTANGPSFVVSATDASGDSGTGNLQVVISDDA 534
Cdd:COG3468 401 GNNGGGGVGGGGGGGLTLTGGTLTVNGNYTGNNGTLVLNTVLGDDN 446
|
|
| Hia |
COG5295 |
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ... |
604-1157 |
1.99e-04 |
|
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444098 [Multi-domain] Cd Length: 785 Bit Score: 45.92 E-value: 1.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 604 STSAANPTGVWVSVDVAKAIILGLTPTDSTNYDDALNEAIKAFGDTGRLANAQNVSYFMSDGLPNASSLSGTPATVPDGN 683
Cdd:COG5295 66 ATAGAGSGGTSATAASSVASGGASAATAASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAAAST 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 684 NSLGGGNGIDGDGTTLSGETKDWADFLTANNINSYALGMGSGATQSALDPIAYNGVSGASPANTTAVVVTDFSQLTATLl 763
Cdd:COG5295 146 GGSSAAGGSNTATATGSSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVN- 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 764 STVVAPPLAGQLINGVAASAGADGGWLNAITVGGVTYTYNQKTDSAGVSGGTSVGTFNTATNEWTITLAGGILKVDMDNG 843
Cdd:COG5295 225 AGAATGSAASAGGSASAGAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 844 AYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLSIVINPAVGPTVVRDDFIITNQDPATIPDWALLANDTGPLAATQM 923
Cdd:COG5295 305 NATAGGGNAGSGGGGAAALGSAGGSSGVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAA 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 924 ITSVSGAVGGTVTDNAGSVSFDDTSGNATpnsyeGSFNYTNSTTTDTAKVYVDVQSGSTLTGSYLDEILIGGSGNDTLNG 1003
Cdd:COG5295 385 GNAAGAAGAGSAGSGGSSTGASAGGGASA-----AGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGA 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1004 NAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGGNGNDTASYFDSAAGVTVTVNGASQNTGGAGTDSLSNMENLVGS 1083
Cdd:COG5295 460 GGAANVGAATTAASAAATAAAATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAA 539
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1994230699 1084 MFNDSLTGDGNANVLSGLAGNDILSGGGGDDLLIGGTGSDTLTGGAGKDTFKWMAGDAGGTDTIKDFTTGANGD 1157
Cdd:COG5295 540 AAAGGGSTTAATGTNSVAVGNNTATGANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAVATGD 613
|
|
| T1SS_rpt_143 |
TIGR03660 |
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur ... |
325-422 |
2.57e-04 |
|
T1SS-143 repeat domain; This model represents a domain of about 143 amino acids that may occur singly or in up to 23 tandem repeats in very large proteins in the genus Vibrio, and in related species such as Legionella pneumophila, Photobacterium profundum, Rhodopseudomonas palustris, Shewanella pealeana, and Aeromonas hydrophila. Proteins with these domains represent a subset of a broader set of proteins with a particular signal for type 1 secretion, consisting of several glycine-rich repeats modeled by pfam00353, followed by a C-terminal domain modeled by TIGR03661. Proteins with this domain tend to share several properties with the RtxA (Repeats in Toxin) protein of Vibrio cholerae, including a large size often containing tandemly repeated domains and a C-terminal signal for type 1 secretion. [Cellular processes, Pathogenesis]
Pssm-ID: 132699 [Multi-domain] Cd Length: 137 Bit Score: 42.27 E-value: 2.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 325 VSSNGNS-----DSNPAGGFTVTGLYG-----TLTMGLDGEYSYTLTAA-SVPVGASE---VFTYTLKDGDGDTDPATLT 390
Cdd:TIGR03660 27 LTSGGQAvtlseTSNADGNFTYTATAGgnpvfTLTLNADGSYEFTLEGPlDHAAGSDEltlNFPIIATDFDGDTSSITLP 106
|
90 100 110
....*....|....*....|....*....|...
gi 1994230699 391 INIAQDtrVPVLTIGNA-TVDEEGLPEGTAASG 422
Cdd:TIGR03660 107 VTIVDD--VPTITDVDAlTVDEDDLPGGSDGSK 137
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
25-543 |
2.71e-04 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 45.54 E-value: 2.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 25 SDVNLTVASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNPNDGDFKALTGGGVGSEVFTYTL 104
Cdd:COG4625 3 GGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 105 TDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGSDSSKESTTVTGDFTISAPDGVKTL 184
Cdd:COG4625 83 GGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 185 SVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPTANGNNSLFEDFAVSLVDSDGDSASN 264
Cdd:COG4625 163 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 265 TLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVMGADGAAISQVVSSNGNSDSNPAGGFTVTGL 344
Cdd:COG4625 243 GGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 345 YGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRVPVLTIGNATVDEEGLPEGTAASGNS 424
Cdd:COG4625 323 GGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 425 EIFNGSFTINTQGENLTTLTIGGQTYNLTSGGSQTLINNTEGMLTVTGVSGPTAGVYTVNYTYTLKDNVLTHNVQGNSDT 504
Cdd:COG4625 403 GGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNN 482
|
490 500 510
....*....|....*....|....*....|....*....
gi 1994230699 505 ANGPSFVVSATDASGDSGTGNLQVVISDDAPIANAVTNA 543
Cdd:COG4625 483 TYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGT 521
|
|
| ViaA |
COG2425 |
Uncharacterized conserved protein, contains a von Willebrand factor type A (vWA) domain ... |
543-671 |
2.75e-04 |
|
Uncharacterized conserved protein, contains a von Willebrand factor type A (vWA) domain [Function unknown];
Pssm-ID: 441973 [Multi-domain] Cd Length: 263 Bit Score: 44.29 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 543 AGQATQVQNTNLMLILDISGSMGDpsgyqgmTRMQVMQKSALELLDKYSAygSVMVNIVTFSTSAANPTGVWVSVDVAKA 622
Cdd:COG2425 110 ASAAVPLLEGPVVLCVDTSGSMAG-------SKEAAAKAAALALLRALRP--NRRFGVILFDTEVVEDLPLTADDGLEDA 180
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1994230699 623 I--ILGLTPTDSTNYDDALNEAIKAFgDTGRLANAQNVsyFMSDGLPNASS 671
Cdd:COG2425 181 IefLSGLFAGGGTDIAPALRAALELL-EEPDYRNADIV--LITDGEAGVSP 228
|
|
| VCBS_repeat |
TIGR01965 |
VCBS repeat; This domain of about 100 residues is found multiple (up to 35) copies in long ... |
40-129 |
4.51e-04 |
|
VCBS repeat; This domain of about 100 residues is found multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion.
Pssm-ID: 273899 [Multi-domain] Cd Length: 99 Bit Score: 40.78 E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 40 NGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNPNDGDFKALTGGGVGSEVFTYTLTDAdgdvSTATLTLT 119
Cdd:TIGR01965 1 SGQLTISDADAGQAHFIAQTDAAGQYGTFSIDADGQWTYQADNSQTAVQALKAGETLTDTFTVTSADG----TSQTVTIT 76
|
90
....*....|
gi 1994230699 120 IKNDDDGVTI 129
Cdd:TIGR01965 77 ITGANDAAVI 86
|
|
| vWA_ywmD_type |
cd01456 |
VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood ... |
547-649 |
5.93e-04 |
|
VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the members of this subgroup. All members of this subgroup however have a conserved MIDAS motif.
Pssm-ID: 238733 [Multi-domain] Cd Length: 206 Bit Score: 42.42 E-value: 5.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 547 TQVQNTNLMLILDISGSMGDPSGyQGMTRMQVMQKSALELLDKYSayGSVMVNIVTFSTSAANPTGVWVSVDVAKAI--I 624
Cdd:cd01456 16 EPQLPPNVAIVLDNSGSMREVDG-GGETRLDNAKAALDETANALP--DGTRLGLWTFSGDGDNPLDVRVLVPKGCLTapV 92
|
90 100
....*....|....*....|....*
gi 1994230699 625 LGLTPTDSTNYDDALNEAIKAFGDT 649
Cdd:cd01456 93 NGFPSAQRSALDAALNSLQTPTGWT 117
|
|
| Cadherin_5 |
pfam17892 |
Cadherin-like domain; |
17-120 |
9.11e-04 |
|
Cadherin-like domain;
Pssm-ID: 436123 [Multi-domain] Cd Length: 98 Bit Score: 39.87 E-value: 9.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 17 VDDVPTAVSDVNLTVASENNLV------LNGNVItnDVQGaDGAAVTAGTLSGTYGSLVLNANGTYTYTLNPNDGdfkal 90
Cdd:pfam17892 1 VNDAPVATGDVTLATGTEDTPLtitaaqLLANAT--DVDG-DTLSVTNLTADAGHGTVVDNGDGTYTFTPAANYN----- 72
|
90 100 110
....*....|....*....|....*....|
gi 1994230699 91 tgggvGSEVFTYTLTDADGDVSTATLTLTI 120
Cdd:pfam17892 73 -----GPVSFTYTVSDGHGGTTTATASLTV 97
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
13-447 |
2.13e-03 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 42.24 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 13 SVQIVDDVPTAVSDVNLTVASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNpndgdfkALTG 92
Cdd:COG3468 1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGG-------AGSG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 93 GGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGSDSSKESTTVTGD 172
Cdd:COG3468 74 GGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 173 FTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPTANGNNSLFEDFAV 252
Cdd:COG3468 154 AAAAGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGN 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 253 SLVDSDGDSASNTLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVmGADGAAISQVVSSNGNSD 332
Cdd:COG3468 234 TGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGT-GGGGTASTGGGGGGGGGN 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 333 SNPAGGFTVTGLYGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRVPVLTIGNATVDEE 412
Cdd:COG3468 313 GGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVG 392
|
410 420 430
....*....|....*....|....*....|....*
gi 1994230699 413 GLPEGTAASGNSEIFNGSFTINTQGENLTTLTIGG 447
Cdd:COG3468 393 TGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNG 427
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
2-448 |
2.16e-03 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 42.46 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 2 DSDGDSASNTLSVQIVDDVPTAVSDVNLTVASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLN 81
Cdd:COG4625 91 GGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGG 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 82 PNDGDFKALTGGGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGSD 161
Cdd:COG4625 171 GGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGG 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 162 SSKESTTVTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPTAN 241
Cdd:COG4625 251 GGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 242 GNNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVMGADGAAI 321
Cdd:COG4625 331 GGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGG 410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 322 SQVVSSNGNSDSNPAGGFTVTGLYGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRVPV 401
Cdd:COG4625 411 GGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTV 490
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1994230699 402 LTIGNATVDEEGLPEGTAASGNSEIFNGSFTINTQGENLTTLTIGGQ 448
Cdd:COG4625 491 NGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYA 537
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
507-1057 |
2.25e-03 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 42.46 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 507 GPSFVVSATDASGDSGTGNLQVVISDDAPIANAVTNAGQATQVQNTNLMLILDISGSMGDPSGYQGMTrMQVMQKSALEL 586
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGG-GGGGGAGGGGG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 587 LDKYSAYGSVMVNIVTFSTSAANPTGVWVSVDVAKAIILGLTPTDSTNYDDALNEAIKAFGDTGRLANAQNVSYFMSDGL 666
Cdd:COG4625 80 GGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 667 PNASSLSGTPATVPDGNNSLGGGNGIDGDGTTLSGETKDWADFLTANNINSYALGMGSGATQSALDPIAYNGVSGASPAN 746
Cdd:COG4625 160 AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 747 TTAVVVTDFSQLTATLLSTVVAPPLAGQLINGVAASAGADGGWLNAITVGGVTYTYNQKTDSAGVSGGTSVGTFNTATNE 826
Cdd:COG4625 240 GGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 827 WTITLAGGIlkvdmdNGAYTYTPPTSIPVGGINQVVGYSVIDNDGDTASSTLSIVINPAVGPTVVRDDFIITNQDPATIP 906
Cdd:COG4625 320 GGGGGGGGG------GGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGG 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 907 DWALLANDTGPLAATQMITSVSGAVGGTVTDNAGSVSFDDTSGNATPNSYEGSFNYTNSTTTDTAKVYVDVQSGSTLTGS 986
Cdd:COG4625 394 GGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGA 473
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1994230699 987 YLDEILIGGSGNDTLNGNAGNDILLGGLGNDTLNGGEGNDLLIGGAGNDTLNGGNGNDTASYFDSAAGVTV 1057
Cdd:COG4625 474 GTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYAPGTTYTI 544
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
47-133 |
3.50e-03 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 37.99 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 47 DVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTLNPNdgdfkaltggGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDG 126
Cdd:NF012211 21 DVDGDDLTVSNVSYSGPTNGTVTDNGDGTYTYTPNEN----------FNGDDSFTYTVSDGTGATATATVFVTVNPVNDA 90
|
....*..
gi 1994230699 127 VTITNLT 133
Cdd:NF012211 91 PVAGNDA 97
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
1-437 |
3.62e-03 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 41.69 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 1 MDSDGDSASNTLSVQIVDDVPTAVSDVNLTVASENNLVLNGNVITNDVQGADGAAVTAGTLSGTYGSLVLNANGTYTYTL 80
Cdd:COG4625 58 GTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGA 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 81 NPNDGDFKALTGGGVGSEVFTYTLTDADGDVSTATLTLTIKNDDDGVTITNLTPKGEGGDAKVYEDDLLATRGENESAGS 160
Cdd:COG4625 138 GGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGG 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 161 DSSKESTTVTGDFTISAPDGVKTLSVGGINIVVNGVVAGFPLSGVTTPLGNTLTITGYNPATGLVSYSYTLNDNEAHPTA 240
Cdd:COG4625 218 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGG 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 241 NGNNSLFEDFAVSLVDSDGDSASNTLSVQIVDDVPTANDDADSATEGVFTPVTGNVITGAGTIGGTAGAGVDVMGADGAA 320
Cdd:COG4625 298 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGS 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 321 ISQVVSSNGNSDSNPAGGFTVTGLYGTLTMGLDGEYSYTLTAASVPVGASEVFTYTLKDGDGDTDPATLTINIAQDTRVP 400
Cdd:COG4625 378 GGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAG 457
|
410 420 430
....*....|....*....|....*....|....*..
gi 1994230699 401 VLTIGNATVDEEGLPEGTAASGNSEIFNGSFTINTQG 437
Cdd:COG4625 458 GSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGG 494
|
|
| VWA |
pfam00092 |
von Willebrand factor type A domain; |
553-759 |
5.44e-03 |
|
von Willebrand factor type A domain;
Pssm-ID: 459670 [Multi-domain] Cd Length: 174 Bit Score: 39.18 E-value: 5.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 553 NLMLILDISGSMGDpsgyqgmTRMQVMQKSALELLDKYSAYG-SVMVNIVTFSTSAAN--PTGVWVSVDVAKAIILGLT- 628
Cdd:pfam00092 1 DIVFLLDGSGSIGG-------DNFEKVKEFLKKLVESLDIGPdGTRVGLVQYSSDVRTefPLNDYSSKEELLSAVDNLRy 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1994230699 629 -PTDSTNYDDALNEAIKAF--GDTGRLANAQNVSYFMSDGLPNASSLsgtpatvpdgnnslgggngidgdgttlsgetKD 705
Cdd:pfam00092 74 lGGGTTNTGKALKYALENLfsSAAGARPGAPKVVVLLTDGRSQDGDP-------------------------------EE 122
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1994230699 706 WADFLTANNINSYALGMGSgATQSALDPIAyngvsgASPANTTAVVVTDFSQLT 759
Cdd:pfam00092 123 VARELKSAGVTVFAVGVGN-ADDEELRKIA------SEPGEGHVFTVSDFEALE 169
|
|
| Peptidase_M10_C |
pfam08548 |
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ... |
983-1018 |
8.71e-03 |
|
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.
Pssm-ID: 430067 [Multi-domain] Cd Length: 222 Bit Score: 39.28 E-value: 8.71e-03
10 20 30
....*....|....*....|....*....|....*.
gi 1994230699 983 LTGSYLDEILIGGSGNDTLNGNAGNDILLGGLGNDT 1018
Cdd:pfam08548 93 LIGNDADNILKGGAGNDILYGGGGADQLWGGAGNDI 128
|
|
| |
