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Conserved domains on  [gi|1997081550|ref|WP_205874798|]
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DUF4286 family protein [Mycobacterium gordonae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4286 super family cl16626
Domain of unknown function (DUF4286); This family of proteins is functionally uncharacterized. ...
 5-67 1.65e-04

Domain of unknown function (DUF4286); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 100 and 112 amino acids in length.


The actual alignment was detected with superfamily member pfam14114:

Pssm-ID: 464087  Cd Length: 100  Bit Score: 37.53  E-value: 1.65e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1997081550   5 IIYVETYPSSPDREQEYNSWYDDIHLPELVAVDGIVSARRLR---PVDDEGP-YVALYEIE-GDDLQA 67
Cdd:pfam14114   2 IIYNVTFNVDEEVEEEWLEWLKEEHIPEVLATGLFSEARLLKvltEEEPEGVtYSLQYEAEsEEDLER 69
 
Name Accession Description Interval E-value
DUF4286 pfam14114
Domain of unknown function (DUF4286); This family of proteins is functionally uncharacterized. ...
 5-67 1.65e-04

Domain of unknown function (DUF4286); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 100 and 112 amino acids in length.


Pssm-ID: 464087  Cd Length: 100  Bit Score: 37.53  E-value: 1.65e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1997081550   5 IIYVETYPSSPDREQEYNSWYDDIHLPELVAVDGIVSARRLR---PVDDEGP-YVALYEIE-GDDLQA 67
Cdd:pfam14114   2 IIYNVTFNVDEEVEEEWLEWLKEEHIPEVLATGLFSEARLLKvltEEEPEGVtYSLQYEAEsEEDLER 69
 
Name Accession Description Interval E-value
DUF4286 pfam14114
Domain of unknown function (DUF4286); This family of proteins is functionally uncharacterized. ...
 5-67 1.65e-04

Domain of unknown function (DUF4286); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 100 and 112 amino acids in length.


Pssm-ID: 464087  Cd Length: 100  Bit Score: 37.53  E-value: 1.65e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1997081550   5 IIYVETYPSSPDREQEYNSWYDDIHLPELVAVDGIVSARRLR---PVDDEGP-YVALYEIE-GDDLQA 67
Cdd:pfam14114   2 IIYNVTFNVDEEVEEEWLEWLKEEHIPEVLATGLFSEARLLKvltEEEPEGVtYSLQYEAEsEEDLER 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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