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Conserved domains on  [gi|1997823619|ref|WP_206285046|]
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CTP synthase [Streptococcus thermophilus]

Protein Classification

CTP synthase( domain architecture ID 11480813)

cytidine triphosphate (CTP) synthase catalyzes the conversion of UTP to CTP in the last committed step in pyrimidine nucleotide biosynthesis

EC:  6.3.4.2
PubMed:  15296735

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
pyrG PRK05380
CTP synthetase; Validated
1-534 0e+00

CTP synthetase; Validated


:

Pssm-ID: 235437 [Multi-domain]  Cd Length: 533  Bit Score: 1102.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   1 MTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFID 80
Cdd:PRK05380    1 MTKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIQKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFID 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  81 INLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATttDSDVVITEVGGTVGDIESLPFLEALRQ 160
Cdd:PRK05380   81 TNLTKYNNVTTGKIYSSVIEKERRGDYLGKTVQVIPHITDEIKERILAAGT--DADVVIVEIGGTVGDIESLPFLEAIRQ 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 161 MKADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESL 240
Cdd:PRK05380  159 LRLELGRENVLFIHLTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDILVCRSERPLPEEEKRKIALFCNVPEEAVISAP 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 241 DVEHIYQVPLNMQAQGMDQIVCDYLKLNAPAADMTEWSAMVDKVLNLKKTTKIALVGKYVELHDAYLSVVEALKHSGLAN 320
Cdd:PRK05380  239 DVDSIYEVPLLLHEQGLDDIVLERLGLEAPEPDLSEWEELVERLKNPKGEVTIALVGKYVELPDAYKSVIEALKHAGIAN 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 321 DTTIDIDWVNANDLTAENVASRLADADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLHLDG 400
Cdd:PRK05380  319 DVKVNIKWIDSEDLEEENVAELLKGVDGILVPGGFGERGIEGKILAIRYARENNIPFLGICLGMQLAVIEFARNVLGLED 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 401 ANSAELDPETQYPIIDIMRDQIDIEDMGGTLRLGLYPCKLKPGSKAAAAYGnQEVVQRRHRHRYEFNTKFREQFEAEGFV 480
Cdd:PRK05380  399 ANSTEFDPDTPHPVIDLMPEQKDVSDLGGTMRLGAYPCKLKPGTLAAEIYG-KEEIYERHRHRYEVNNKYREQLEKAGLV 477
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1997823619 481 FSGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSAFVTAAVENAK 534
Cdd:PRK05380  478 FSGTSPDGRLVEIVELPDHPWFVGVQFHPEFKSRPRRPHPLFAGFVKAALENKK 531
 
Name Accession Description Interval E-value
pyrG PRK05380
CTP synthetase; Validated
1-534 0e+00

CTP synthetase; Validated


Pssm-ID: 235437 [Multi-domain]  Cd Length: 533  Bit Score: 1102.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   1 MTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFID 80
Cdd:PRK05380    1 MTKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIQKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFID 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  81 INLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATttDSDVVITEVGGTVGDIESLPFLEALRQ 160
Cdd:PRK05380   81 TNLTKYNNVTTGKIYSSVIEKERRGDYLGKTVQVIPHITDEIKERILAAGT--DADVVIVEIGGTVGDIESLPFLEAIRQ 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 161 MKADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESL 240
Cdd:PRK05380  159 LRLELGRENVLFIHLTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDILVCRSERPLPEEEKRKIALFCNVPEEAVISAP 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 241 DVEHIYQVPLNMQAQGMDQIVCDYLKLNAPAADMTEWSAMVDKVLNLKKTTKIALVGKYVELHDAYLSVVEALKHSGLAN 320
Cdd:PRK05380  239 DVDSIYEVPLLLHEQGLDDIVLERLGLEAPEPDLSEWEELVERLKNPKGEVTIALVGKYVELPDAYKSVIEALKHAGIAN 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 321 DTTIDIDWVNANDLTAENVASRLADADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLHLDG 400
Cdd:PRK05380  319 DVKVNIKWIDSEDLEEENVAELLKGVDGILVPGGFGERGIEGKILAIRYARENNIPFLGICLGMQLAVIEFARNVLGLED 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 401 ANSAELDPETQYPIIDIMRDQIDIEDMGGTLRLGLYPCKLKPGSKAAAAYGnQEVVQRRHRHRYEFNTKFREQFEAEGFV 480
Cdd:PRK05380  399 ANSTEFDPDTPHPVIDLMPEQKDVSDLGGTMRLGAYPCKLKPGTLAAEIYG-KEEIYERHRHRYEVNNKYREQLEKAGLV 477
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1997823619 481 FSGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSAFVTAAVENAK 534
Cdd:PRK05380  478 FSGTSPDGRLVEIVELPDHPWFVGVQFHPEFKSRPRRPHPLFAGFVKAALENKK 531
PyrG COG0504
CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]; CTP synthase ...
2-534 0e+00

CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]; CTP synthase (UTP-ammonia lyase) is part of the Pathway/BioSystem: Pyrimidine biosynthesis


Pssm-ID: 440270 [Multi-domain]  Cd Length: 535  Bit Score: 1093.51  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   2 TKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDI 81
Cdd:COG0504     1 TKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIQKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  82 NLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATTTDSDVVITEVGGTVGDIESLPFLEALRQM 161
Cdd:COG0504    81 NLSKANNVTTGQIYSSVIEKERRGDYLGKTVQVIPHITDEIKRRIRRAAEESGADVVIVEIGGTVGDIESLPFLEAIRQL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 162 KADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESLD 241
Cdd:COG0504   161 RLELGRENVLFIHVTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDILVCRSERPLPEEIKRKIALFCNVPEEAVISAPD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 242 VEHIYQVPLNMQAQGMDQIVCDYLKLNAPAADMTEWSAMVDKVLNLKKTTKIALVGKYVELHDAYLSVVEALKHSGLAND 321
Cdd:COG0504   241 VDSIYEVPLMLHEQGLDEIVLKKLGLEAREPDLSEWEELVERIKNPKKEVTIALVGKYVELPDAYKSVVEALKHAGIANG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 322 TTIDIDWVNANDLTAENVASRLADADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLHLDGA 401
Cdd:COG0504   321 VKVNIKWIDSEDLEEENAEELLKGVDGILVPGGFGERGIEGKIAAIRYARENKIPFLGICLGMQLAVIEFARNVLGLEDA 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 402 NSAELDPETQYPIIDIMRDQIDIEDMGGTLRLGLYPCKLKPGSKAAAAYGnQEVVQRRHRHRYEFNTKFREQFEAEGFVF 481
Cdd:COG0504   401 NSTEFDPNTPHPVIDLMPEQKDVSDLGGTMRLGAYPCKLKPGTLAAEAYG-KEEISERHRHRYEFNNEYREQLEKAGLVF 479
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1997823619 482 SGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSAFVTAAVENAK 534
Cdd:COG0504   480 SGTSPDGRLVEIVELPDHPWFVGVQFHPEFKSRPNRPHPLFRGFVKAALEYKK 532
PyrG TIGR00337
CTP synthase; CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. ...
2-528 0e+00

CTP synthase; CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5' upstream of enolase in both beta (Nitrosomonas europaea) and gamma (E.coli) subdivisions of proteobacterium (FEMS Microbiol Lett 1998 Aug 1;165(1):153-7). [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]


Pssm-ID: 273021 [Multi-domain]  Cd Length: 525  Bit Score: 895.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   2 TKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDI 81
Cdd:TIGR00337   1 MKYIFVTGGVVSSLGKGITAASLGRLLKARGLNVTIIKIDPYINIDPGTMSPLQHGEVFVTDDGAETDLDLGHYERFLDT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  82 NLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATTTDSDVVITEVGGTVGDIESLPFLEALRQM 161
Cdd:TIGR00337  81 NLTRDNNITTGKIYSSVIEKERKGDYLGKTVQIIPHITNEIKDRILRVAKISGPDVVIVEIGGTVGDIESLPFLEAIRQF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 162 KADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESLD 241
Cdd:TIGR00337 161 RVEVGRENVLFIHVTLVPYIAAAGEQKTKPTQHSVKELRSLGIQPDIIICRSSRPLDPNTKDKIALFCDVEEEAVISAKD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 242 VEHIYQVPLNMQAQGMDQIVCDYLKLNAPAADMTEWSAMVDKVLNLKKTTKIALVGKYVELHDAYLSVVEALKHSGLAND 321
Cdd:TIGR00337 241 VSSIYEVPLLLLKQGLDDYLCRRLNLNCDEADLSEWEQLVEKFANPKHEVTIGIVGKYVELKDAYLSVIEALKHAGAKLD 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 322 TTIDIDWVNANDLTAENVASrLADADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLHLDGA 401
Cdd:TIGR00337 321 TKVNIKWIDSEDLEEEGVEF-LKGLDGILVPGGFGERGVEGKILAIKYARENNIPFLGICLGMQLAVIEFARNVAGLEGA 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 402 NSAELDPETQYPIIDIMRDQIDIEDMGGTLRLGLYPCKLKPGSKAAAAYGnQEVVQRRHRHRYEFNTKFREQFEAEGFVF 481
Cdd:TIGR00337 400 NSTEFDPDTKYPVVDLLPEQKDISDLGGTMRLGLYPCILKPGTLAFKLYG-KEEVYERHRHRYEVNNEYREQIENKGLIV 478
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*..
gi 1997823619 482 SGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSAFVTA 528
Cdd:TIGR00337 479 SGTSPDGRLVEIIELPDHPFFVACQFHPEFTSRPNDPHPLFLGFVKA 525
CTP_synth_N pfam06418
CTP synthase N-terminus; This family consists of the N-terminal region of the CTP synthase ...
3-267 0e+00

CTP synthase N-terminus; This family consists of the N-terminal region of the CTP synthase protein (EC:6.3.4.2). This family is found in conjunction with pfam00117 located in the C-terminal region of the protein. CTP synthase catalyzes the synthesis of CTP from UTP by amination of the pyrimidine ring at the 4-position.


Pssm-ID: 461903  Cd Length: 265  Bit Score: 575.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   3 KYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDIN 82
Cdd:pfam06418   1 KYIFVTGGVVSGLGKGITAASLGRLLKSRGLKVTIIKIDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDIN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  83 LNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATTTDSDVVITEVGGTVGDIESLPFLEALRQMK 162
Cdd:pfam06418  81 LTKDNNITTGKIYQSVIEKERRGDYLGKTVQVIPHITDEIKERIRRVAKEVGPDVVIVEIGGTVGDIESLPFLEAIRQLR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 163 ADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESLDV 242
Cdd:pfam06418 161 LEVGRENVLFIHVTLVPYLKAAGELKTKPTQHSVKELRSIGIQPDIIVCRSERPLDEEVKEKIALFCNVPKEAVISAPDV 240
                         250       260
                  ....*....|....*....|....*
gi 1997823619 243 EHIYQVPLNMQAQGMDQIVCDYLKL 267
Cdd:pfam06418 241 SSIYEVPLLLEEQGLDDIILKRLNL 265
CTPS_N cd03113
N-terminal domain of cytidine 5'-triphosphate synthase; Cytidine 5'-triphosphate synthase ...
3-263 0e+00

N-terminal domain of cytidine 5'-triphosphate synthase; Cytidine 5'-triphosphate synthase (CTPS) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain. The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer nascent ammonia to the acceptor substrate at the synthetase domain to form an aminated product.


Pssm-ID: 349767  Cd Length: 261  Bit Score: 508.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   3 KYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDIN 82
Cdd:cd03113     1 KYIFVTGGVVSGLGKGITASSIGRLLKSRGLRVTAIKIDPYLNVDAGTMSPYEHGEVFVLDDGGETDLDLGNYERFLDVN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  83 LNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATTTDSDVVITEVGGTVGDIESLPFLEALRQMK 162
Cdd:cd03113    81 LTRDNNITTGKIYSEVIEKERRGDYLGKTVQVIPHITDEIKERIRRVAKIPEPDVCIVEIGGTVGDIESLPFLEALRQFQ 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 163 ADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESLDV 242
Cdd:cd03113   161 FEVGRENFLFIHVTLVPYLEATGEQKTKPTQHSVKELRSLGIQPDIIVCRSEKPLDEETKEKIALFCNVPPEAVISVHDV 240
                         250       260
                  ....*....|....*....|.
gi 1997823619 243 EHIYQVPLNMQAQGMDQIVCD 263
Cdd:cd03113   241 SSIYEVPLLLEKQGLDDYILR 261
 
Name Accession Description Interval E-value
pyrG PRK05380
CTP synthetase; Validated
1-534 0e+00

CTP synthetase; Validated


Pssm-ID: 235437 [Multi-domain]  Cd Length: 533  Bit Score: 1102.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   1 MTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFID 80
Cdd:PRK05380    1 MTKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIQKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFID 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  81 INLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATttDSDVVITEVGGTVGDIESLPFLEALRQ 160
Cdd:PRK05380   81 TNLTKYNNVTTGKIYSSVIEKERRGDYLGKTVQVIPHITDEIKERILAAGT--DADVVIVEIGGTVGDIESLPFLEAIRQ 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 161 MKADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESL 240
Cdd:PRK05380  159 LRLELGRENVLFIHLTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDILVCRSERPLPEEEKRKIALFCNVPEEAVISAP 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 241 DVEHIYQVPLNMQAQGMDQIVCDYLKLNAPAADMTEWSAMVDKVLNLKKTTKIALVGKYVELHDAYLSVVEALKHSGLAN 320
Cdd:PRK05380  239 DVDSIYEVPLLLHEQGLDDIVLERLGLEAPEPDLSEWEELVERLKNPKGEVTIALVGKYVELPDAYKSVIEALKHAGIAN 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 321 DTTIDIDWVNANDLTAENVASRLADADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLHLDG 400
Cdd:PRK05380  319 DVKVNIKWIDSEDLEEENVAELLKGVDGILVPGGFGERGIEGKILAIRYARENNIPFLGICLGMQLAVIEFARNVLGLED 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 401 ANSAELDPETQYPIIDIMRDQIDIEDMGGTLRLGLYPCKLKPGSKAAAAYGnQEVVQRRHRHRYEFNTKFREQFEAEGFV 480
Cdd:PRK05380  399 ANSTEFDPDTPHPVIDLMPEQKDVSDLGGTMRLGAYPCKLKPGTLAAEIYG-KEEIYERHRHRYEVNNKYREQLEKAGLV 477
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1997823619 481 FSGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSAFVTAAVENAK 534
Cdd:PRK05380  478 FSGTSPDGRLVEIVELPDHPWFVGVQFHPEFKSRPRRPHPLFAGFVKAALENKK 531
PyrG COG0504
CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]; CTP synthase ...
2-534 0e+00

CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]; CTP synthase (UTP-ammonia lyase) is part of the Pathway/BioSystem: Pyrimidine biosynthesis


Pssm-ID: 440270 [Multi-domain]  Cd Length: 535  Bit Score: 1093.51  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   2 TKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDI 81
Cdd:COG0504     1 TKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIQKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  82 NLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATTTDSDVVITEVGGTVGDIESLPFLEALRQM 161
Cdd:COG0504    81 NLSKANNVTTGQIYSSVIEKERRGDYLGKTVQVIPHITDEIKRRIRRAAEESGADVVIVEIGGTVGDIESLPFLEAIRQL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 162 KADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESLD 241
Cdd:COG0504   161 RLELGRENVLFIHVTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDILVCRSERPLPEEIKRKIALFCNVPEEAVISAPD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 242 VEHIYQVPLNMQAQGMDQIVCDYLKLNAPAADMTEWSAMVDKVLNLKKTTKIALVGKYVELHDAYLSVVEALKHSGLAND 321
Cdd:COG0504   241 VDSIYEVPLMLHEQGLDEIVLKKLGLEAREPDLSEWEELVERIKNPKKEVTIALVGKYVELPDAYKSVVEALKHAGIANG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 322 TTIDIDWVNANDLTAENVASRLADADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLHLDGA 401
Cdd:COG0504   321 VKVNIKWIDSEDLEEENAEELLKGVDGILVPGGFGERGIEGKIAAIRYARENKIPFLGICLGMQLAVIEFARNVLGLEDA 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 402 NSAELDPETQYPIIDIMRDQIDIEDMGGTLRLGLYPCKLKPGSKAAAAYGnQEVVQRRHRHRYEFNTKFREQFEAEGFVF 481
Cdd:COG0504   401 NSTEFDPNTPHPVIDLMPEQKDVSDLGGTMRLGAYPCKLKPGTLAAEAYG-KEEISERHRHRYEFNNEYREQLEKAGLVF 479
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1997823619 482 SGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSAFVTAAVENAK 534
Cdd:COG0504   480 SGTSPDGRLVEIVELPDHPWFVGVQFHPEFKSRPNRPHPLFRGFVKAALEYKK 532
PyrG TIGR00337
CTP synthase; CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. ...
2-528 0e+00

CTP synthase; CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5' upstream of enolase in both beta (Nitrosomonas europaea) and gamma (E.coli) subdivisions of proteobacterium (FEMS Microbiol Lett 1998 Aug 1;165(1):153-7). [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]


Pssm-ID: 273021 [Multi-domain]  Cd Length: 525  Bit Score: 895.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   2 TKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDI 81
Cdd:TIGR00337   1 MKYIFVTGGVVSSLGKGITAASLGRLLKARGLNVTIIKIDPYINIDPGTMSPLQHGEVFVTDDGAETDLDLGHYERFLDT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  82 NLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATTTDSDVVITEVGGTVGDIESLPFLEALRQM 161
Cdd:TIGR00337  81 NLTRDNNITTGKIYSSVIEKERKGDYLGKTVQIIPHITNEIKDRILRVAKISGPDVVIVEIGGTVGDIESLPFLEAIRQF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 162 KADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESLD 241
Cdd:TIGR00337 161 RVEVGRENVLFIHVTLVPYIAAAGEQKTKPTQHSVKELRSLGIQPDIIICRSSRPLDPNTKDKIALFCDVEEEAVISAKD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 242 VEHIYQVPLNMQAQGMDQIVCDYLKLNAPAADMTEWSAMVDKVLNLKKTTKIALVGKYVELHDAYLSVVEALKHSGLAND 321
Cdd:TIGR00337 241 VSSIYEVPLLLLKQGLDDYLCRRLNLNCDEADLSEWEQLVEKFANPKHEVTIGIVGKYVELKDAYLSVIEALKHAGAKLD 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 322 TTIDIDWVNANDLTAENVASrLADADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLHLDGA 401
Cdd:TIGR00337 321 TKVNIKWIDSEDLEEEGVEF-LKGLDGILVPGGFGERGVEGKILAIKYARENNIPFLGICLGMQLAVIEFARNVAGLEGA 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 402 NSAELDPETQYPIIDIMRDQIDIEDMGGTLRLGLYPCKLKPGSKAAAAYGnQEVVQRRHRHRYEFNTKFREQFEAEGFVF 481
Cdd:TIGR00337 400 NSTEFDPDTKYPVVDLLPEQKDISDLGGTMRLGLYPCILKPGTLAFKLYG-KEEVYERHRHRYEVNNEYREQIENKGLIV 478
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*..
gi 1997823619 482 SGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSAFVTA 528
Cdd:TIGR00337 479 SGTSPDGRLVEIIELPDHPFFVACQFHPEFTSRPNDPHPLFLGFVKA 525
PLN02327 PLN02327
CTP synthase
2-529 0e+00

CTP synthase


Pssm-ID: 215186 [Multi-domain]  Cd Length: 557  Bit Score: 678.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   2 TKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDI 81
Cdd:PLN02327    1 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  82 NLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAA------TTTDSDVVITEVGGTVGDIESLPFL 155
Cdd:PLN02327   81 TLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAkipvdgKEGPADVCVIELGGTVGDIESMPFI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 156 EALRQMKADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEA 235
Cdd:PLN02327  161 EALRQFSFRVGPGNFCLIHVSLVPVLGVVGEQKTKPTQHSVRGLRALGLTPHILACRSTKPLEENVKEKLSQFCHVPAEN 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 236 VIESLDVEHIYQVPLNMQAQGMDQIVCDYLKL--NAPAADMTEWSAMVDKVLNLKKTTKIALVGKYVELHDAYLSVVEAL 313
Cdd:PLN02327  241 ILNLHDVSNIWHVPLLLRDQKAHEAILKVLNLlsVAREPDLEEWTARAESCDNLTEPVRIAMVGKYTGLSDSYLSVLKAL 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 314 KHSGLANDTTIDIDWVNANDLTAENVAS----------RLADADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLG 383
Cdd:PLN02327  321 LHASVACSRKLVIDWVAASDLEDETAKEtpdayaaawkLLKGADGILVPGGFGDRGVEGKILAAKYARENKVPYLGICLG 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 384 MQLTCIEFARHVLHLDGANSAELDPETQYPIIDIMrDQIDIEDMGGTLRLGLYPCKLK-PGSKAAAAYGNQEVVQRRHRH 462
Cdd:PLN02327  401 MQIAVIEFARSVLGLKDANSTEFDPETPNPCVIFM-PEGSKTHMGGTMRLGSRRTYFQtPDCKSAKLYGNVSFVDERHRH 479
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1997823619 463 RYEFNTKFREQFEAEGFVFSGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSAFVTAA 529
Cdd:PLN02327  480 RYEVNPEMVPRLEKAGLSFVGKDETGRRMEIVELPSHPFFVGVQFHPEFKSRPGKPSPLFLGLIAAA 546
CTP_synth_N pfam06418
CTP synthase N-terminus; This family consists of the N-terminal region of the CTP synthase ...
3-267 0e+00

CTP synthase N-terminus; This family consists of the N-terminal region of the CTP synthase protein (EC:6.3.4.2). This family is found in conjunction with pfam00117 located in the C-terminal region of the protein. CTP synthase catalyzes the synthesis of CTP from UTP by amination of the pyrimidine ring at the 4-position.


Pssm-ID: 461903  Cd Length: 265  Bit Score: 575.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   3 KYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDIN 82
Cdd:pfam06418   1 KYIFVTGGVVSGLGKGITAASLGRLLKSRGLKVTIIKIDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDIN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  83 LNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATTTDSDVVITEVGGTVGDIESLPFLEALRQMK 162
Cdd:pfam06418  81 LTKDNNITTGKIYQSVIEKERRGDYLGKTVQVIPHITDEIKERIRRVAKEVGPDVVIVEIGGTVGDIESLPFLEAIRQLR 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 163 ADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESLDV 242
Cdd:pfam06418 161 LEVGRENVLFIHVTLVPYLKAAGELKTKPTQHSVKELRSIGIQPDIIVCRSERPLDEEVKEKIALFCNVPKEAVISAPDV 240
                         250       260
                  ....*....|....*....|....*
gi 1997823619 243 EHIYQVPLNMQAQGMDQIVCDYLKL 267
Cdd:pfam06418 241 SSIYEVPLLLEEQGLDDIILKRLNL 265
CTPS_N cd03113
N-terminal domain of cytidine 5'-triphosphate synthase; Cytidine 5'-triphosphate synthase ...
3-263 0e+00

N-terminal domain of cytidine 5'-triphosphate synthase; Cytidine 5'-triphosphate synthase (CTPS) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain. The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer nascent ammonia to the acceptor substrate at the synthetase domain to form an aminated product.


Pssm-ID: 349767  Cd Length: 261  Bit Score: 508.95  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   3 KYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDIN 82
Cdd:cd03113     1 KYIFVTGGVVSGLGKGITASSIGRLLKSRGLRVTAIKIDPYLNVDAGTMSPYEHGEVFVLDDGGETDLDLGNYERFLDVN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619  83 LNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITDALKDKIKRAATTTDSDVVITEVGGTVGDIESLPFLEALRQMK 162
Cdd:cd03113    81 LTRDNNITTGKIYSEVIEKERRGDYLGKTVQVIPHITDEIKERIRRVAKIPEPDVCIVEIGGTVGDIESLPFLEALRQFQ 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 163 ADVGSDNVMYIHTTLLPYLKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEEPAGQGIKNKLAQFCDVAPEAVIESLDV 242
Cdd:cd03113   161 FEVGRENFLFIHVTLVPYLEATGEQKTKPTQHSVKELRSLGIQPDIIVCRSEKPLDEETKEKIALFCNVPPEAVISVHDV 240
                         250       260
                  ....*....|....*....|.
gi 1997823619 243 EHIYQVPLNMQAQGMDQIVCD 263
Cdd:cd03113   241 SSIYEVPLLLEKQGLDDYILR 261
GATase1_CTP_Synthase cd01746
Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase; ...
292-526 4.43e-136

Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase; Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase (CTP). CTP is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. CTPs produce CTP from UTP and glutamine and regulate intracellular CTP levels through interactions with four ribonucleotide triphosphates. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. CTP is derived form UTP in three separate steps involving two active sites. In one active site, the UTP O4 oxygen is activated by Mg-ATP-dependent phosphorylation, followed by displacement of the resulting 4-phosphate moiety by ammonia. At a separate site, ammonia is generated via rate limiting glutamine hydrolysis (glutaminase) activity. A gated channel that spans between the glutamine hydrolysis and amidoligase active sites provides a path for ammonia diffusion. CTPs belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.


Pssm-ID: 153217 [Multi-domain]  Cd Length: 235  Bit Score: 393.46  E-value: 4.43e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 292 KIALVGKYVELHDAYLSVVEALKHSGLANDTTIDIDWVNANDLTAENVASRLADADGIIVPGGFGQRGTEGKIQAIRYAR 371
Cdd:cd01746     2 RIALVGKYVELPDAYLSVLEALKHAGIALGVKLEIKWIDSEDLEEENAEEALKGADGILVPGGFGIRGVEGKILAIKYAR 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 372 ENDVPMLGVCLGMQLTCIEFARHVLHLDGANSAELDPETQYPIIDIMRDQIDIEDMGGTLRLGLYPCKLKPGSKAAAAYG 451
Cdd:cd01746    82 ENNIPFLGICLGMQLAVIEFARNVLGLPDANSTEFDPDTPHPVVDLMPEQKGVKDLGGTMRLGAYPVILKPGTLAHKYYG 161
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1997823619 452 nQEVVQRRHRHRYEFNTKFREQFEAEGFVFSGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSAFV 526
Cdd:cd01746   162 -KDEVEERHRHRYEVNPEYVDELEEAGLRFSGTDPDGGLVEIVELPDHPFFVGTQFHPEFKSRPLKPHPLFVGFV 235
GATase pfam00117
Glutamine amidotransferase class-I;
304-526 4.60e-44

Glutamine amidotransferase class-I;


Pssm-ID: 395067 [Multi-domain]  Cd Length: 188  Bit Score: 154.32  E-value: 4.60e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 304 DAYLSVVEALKHSGLANDTTIDIDWVNANDLTAENvasrlADADGIIVPGGFGQRGT-EGKIQAIRYARENDVPMLGVCL 382
Cdd:pfam00117   4 DNGDSFTYNLARALRELGVEVTVVPNDTPAEEILE-----ENPDGIILSGGPGSPGAaGGAIEAIREARELKIPILGICL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 383 GMQLTCIEFARHVLHldgansaeldpetqypiidimrdQIDIEDMGGTLRLGLYPCKLkpgskaaaAYGNQEVVQRRHRH 462
Cdd:pfam00117  79 GHQLLALAFGGKVVK-----------------------AKKFGHHGKNSPVGDDGCGL--------FYGLPNVFIVRRYH 127
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1997823619 463 RYEFNtkfrEQFEAEGFVFSGVSPDN-RLMEVVELPDKkfFVAAQYHPEYHSRPNHAEELYSAFV 526
Cdd:pfam00117 128 SYAVD----PDTLPDGLEVTATSENDgTIMGIRHKKLP--IFGVQFHPESILTPHGPEILFNFFI 186
PRK06186 PRK06186
hypothetical protein; Validated
290-531 3.58e-38

hypothetical protein; Validated


Pssm-ID: 180452 [Multi-domain]  Cd Length: 229  Bit Score: 139.71  E-value: 3.58e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 290 TTKIALVGKYVELHDAYLSVVEALKHSGLANDTTIDIDWVNANDLTAEnvaSRLADADGI-IVPGGfGQRGTEGKIQAIR 368
Cdd:PRK06186    1 TLRIALVGDYNPDVTAHQAIPLALDLAAAVLGLPVDYEWLPTPEITDP---EDLAGFDGIwCVPGS-PYRNDDGALTAIR 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 369 YARENDVPMLGVCLGMQLTCIEFARHVLHLDGANSAELDPETQYPIID----IMRDQIDiedmggtlrlglyPCKLKPGS 444
Cdd:PRK06186   77 FARENGIPFLGTCGGFQHALLEYARNVLGWADAAHAETDPEGDRPVIAplscSLVEKTG-------------DIRLRPGS 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 445 KAAAAYGNQEVVQRRHrHRYEFNTKFREQFEAEGFVFSGVSPDNRLmEVVELPDKKFFVAAQYHPEYHSRPNHAEELYSA 524
Cdd:PRK06186  144 LIARAYGTLEIEEGYH-CRYGVNPEFVAALESGDLRVTGWDEDGDV-RAVELPGHPFFVATLFQPERAALAGRPPPLVRA 221

                  ....*..
gi 1997823619 525 FVTAAVE 531
Cdd:PRK06186  222 FLRAARA 228
GATase1 cd01653
Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase ...
293-402 3.86e-14

Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153210 [Multi-domain]  Cd Length: 115  Bit Score: 68.78  E-value: 3.86e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 293 IALVGKYVELHDAYLSVVEALKHSGlandttIDIDWVnANDLTAENVASRLADADGIIVPGGFG----QRGTEGKIQAIR 368
Cdd:cd01653     1 VAVLLFPGFEELELASPLDALREAG------AEVDVV-SPDGGPVESDVDLDDYDGLILPGGPGtpddLARDEALLALLR 73
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1997823619 369 YARENDVPMLGVCLGMQLTCIEFARHVLHLDGAN 402
Cdd:cd01653    74 EAAAAGKPILGICLGAQLLVLGVQFHPEAIDGAE 107
GAT_1 cd03128
Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase ...
293-386 2.93e-13

Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1)-like domain. This group contains proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA, the A4 beta-galactosidase middle domain and peptidase E. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase (CPSase), cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. For Pyrococcus horikoshii PH1704, the Cys of the nucleophile elbow together with a different His and, a Glu from an adjacent monomer form a catalytic triad different from the typical GATase1 triad. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad of typical GATase1 domains, by having a Ser in place of the reactive Cys at the nucleophile elbow. The E. coli HP-II C-terminal domain, S. meliloti Rm1021 ThuA and the A4 beta-galactosidase middle domain lack the catalytic triad typical GATaseI domains. GATase1-like domains can occur either as single polypeptides, as in Class I glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Peptidase E has a circular permutation in the common core of a typical GTAse1 domain.


Pssm-ID: 153222 [Multi-domain]  Cd Length: 92  Bit Score: 65.68  E-value: 2.93e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 293 IALVGKYVELHDAYLSVVEALKHSGlandttIDIDWVnANDLTAENVASRLADADGIIVPGGFGQ----RGTEGKIQAIR 368
Cdd:cd03128     1 VAVLLFGGSEELELASPLDALREAG------AEVDVV-SPDGGPVESDVDLDDYDGLILPGGPGTpddlAWDEALLALLR 73
                          90
                  ....*....|....*...
gi 1997823619 369 YARENDVPMLGVCLGMQL 386
Cdd:cd03128    74 EAAAAGKPVLGICLGAQL 91
PuuD COG2071
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains ...
336-529 1.00e-11

Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD (putrescine degradation), contains GATase1-like domain [Amino acid transport and metabolism];


Pssm-ID: 441674 [Multi-domain]  Cd Length: 231  Bit Score: 64.80  E-value: 1.00e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 336 AENVASRLADADGIIVPGG-------FGQRGTEGK-----------IQAIRYARENDVPMLGVCLGMQLtciefarhvlh 397
Cdd:COG2071    40 EEDLDELLDRLDGLVLTGGadvdpalYGEEPHPELgpidperdafeLALIRAALERGKPVLGICRGMQL----------- 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 398 ldgANSAeldpetqypiidimrdqidiedMGGTL-----------------RLGLYPCK---LKPGSKAAAAYGnqevvq 457
Cdd:COG2071   109 ---LNVA----------------------LGGTLyqdlpdqvpgaldhrqpAPRYAPRHtveIEPGSRLARILG------ 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 458 rrhrhryefntkfREQFE------------AEGFVFSGVSPDNrLMEVVELPDKKFFVAAQYHPEYHSRPNHAE-ELYSA 524
Cdd:COG2071   158 -------------EEEIRvnslhhqavkrlGPGLRVSARAPDG-VIEAIESPGAPFVLGVQWHPEWLAASDPLSrRLFEA 223

                  ....*
gi 1997823619 525 FVTAA 529
Cdd:COG2071   224 FVEAA 228
Peptidase_C26 pfam07722
Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze ...
328-510 2.96e-09

Peptidase C26; These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C terminus.


Pssm-ID: 429620 [Multi-domain]  Cd Length: 219  Bit Score: 57.27  E-value: 2.96e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 328 WVNANDLTAENVASRLadaDGIIVPGG-------FGQRGTEG-----------KIQAIRYARENDVPMLGVCLGMQLTCI 389
Cdd:pfam07722  44 PILGDPEDAAAILDRL---DGLLLTGGpnvdphfYGEEPSESggpydpardayELALIRAALARGKPILGICRGFQLLNV 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 390 EFaRHVLHLDgansaeldpetqypiidiMRDQIDIEDMGGTLRLGLY----PCKLKPGSKAAAAYGNQEV-VQRRHRhry 464
Cdd:pfam07722 121 AL-GGTLYQD------------------IQEQPGFTDHREHCQVAPYapshAVNVEPGSLLASLLGSEEFrVNSLHH--- 178
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1997823619 465 EFNTKFreqfeAEGFVFSGVSPDNrLMEVVELPD-KKFFVAAQYHPE 510
Cdd:pfam07722 179 QAIDRL-----APGLRVEAVAPDG-TIEAIESPNaKGFALGVQWHPE 219
HisH COG0118
Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH [Amino acid ...
308-386 2.90e-07

Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH [Amino acid transport and metabolism]; Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH is part of the Pathway/BioSystem: Histidine biosynthesis


Pssm-ID: 439888 [Multi-domain]  Cd Length: 196  Bit Score: 50.81  E-value: 2.90e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 308 SVVEALKHsgLANDTTIdidwvnandlTAEnvASRLADADGIIVPG-G-FGQ-----RGTEGkIQAIRYARENDVPMLGV 380
Cdd:COG0118    15 SVAKALER--LGAEVVV----------TSD--PDEIRAADRLVLPGvGaFGDamenlRERGL-DEAIREAVAGGKPVLGI 79

                  ....*.
gi 1997823619 381 CLGMQL 386
Cdd:COG0118    80 CLGMQL 85
GATase1_2 cd01745
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
334-526 6.43e-07

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153216 [Multi-domain]  Cd Length: 189  Bit Score: 49.88  E-value: 6.43e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 334 LTAENVASRLADA-DGIIVPGG--------FGQRGTEGK----------IQAIRYARENDVPMLGVCLGMQLTciefarh 394
Cdd:cd01745    41 VDDEEDLEQYLELlDGLLLTGGgdvdpplyGEEPHPELGpidperdafeLALLRAALERGKPILGICRGMQLL------- 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 395 vlhldgaNSAeldpetqypiidimrdqidiedMGGTLrlglYPCkLKPGSkaaaaygnqevvqrrhRHRYEFNTKfreqf 474
Cdd:cd01745   114 -------NVA----------------------LGGTL----YQD-IRVNS----------------LHHQAIKRL----- 138
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1997823619 475 eAEGFVFSGVSPDnRLMEVVELPDKKFFVAAQYHPEYHSRPNHA-EELYSAFV 526
Cdd:cd01745   139 -ADGLRVEARAPD-GVIEAIESPDRPFVLGVQWHPEWLADTDPDsLKLFEAFV 189
GATase1_IGP_Synthase cd01748
Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate ...
308-386 1.30e-06

Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS); Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). IGPS incorporates ammonia derived from glutamine into N1-[(5'-phosphoribulosyl)-formimino]-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to form 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR) and imidazole glycerol phosphate (IGP). The glutamine amidotransferase domain generates the ammonia nucleophile which is channeled from the glutaminase active site to the PRFAR active site. IGPS belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.


Pssm-ID: 153219 [Multi-domain]  Cd Length: 198  Bit Score: 49.03  E-value: 1.30e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 308 SVVEALKHSGlandttIDIDWVNAndltaenvASRLADADGIIVPG-G-FGQRGTE----GKIQAIRYARENDVPMLGVC 381
Cdd:cd01748    13 SVANALERLG------AEVIITSD--------PEEILSADKLILPGvGaFGDAMANlrerGLIEALKEAIASGKPFLGIC 78

                  ....*
gi 1997823619 382 LGMQL 386
Cdd:cd01748    79 LGMQL 83
hisH PRK13141
imidazole glycerol phosphate synthase subunit HisH; Provisional
308-386 4.05e-06

imidazole glycerol phosphate synthase subunit HisH; Provisional


Pssm-ID: 237288 [Multi-domain]  Cd Length: 205  Bit Score: 47.82  E-value: 4.05e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 308 SVVEALKHSGLANDTTIDIDwvnandltaenvasRLADADGIIVPG--GFG-------QRGTegkIQAIRYARENDVPML 378
Cdd:PRK13141   14 SVEKALERLGAEAVITSDPE--------------EILAADGVILPGvgAFPdamanlrERGL---DEVIKEAVASGKPLL 76

                  ....*...
gi 1997823619 379 GVCLGMQL 386
Cdd:PRK13141   77 GICLGMQL 84
hisH PRK13146
imidazole glycerol phosphate synthase subunit HisH; Provisional
308-386 4.41e-06

imidazole glycerol phosphate synthase subunit HisH; Provisional


Pssm-ID: 237290 [Multi-domain]  Cd Length: 209  Bit Score: 47.85  E-value: 4.41e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 308 SVVEALKHSGLANDTTIdidwvnandlTAEnvASRLADADGIIVPG--GFG--QRGTE--GKIQAIRYARE-NDVPMLGV 380
Cdd:PRK13146   16 SAAKALERAGAGADVVV----------TAD--PDAVAAADRVVLPGvgAFAdcMRGLRavGLGEAVIEAVLaAGRPFLGI 83

                  ....*.
gi 1997823619 381 CLGMQL 386
Cdd:PRK13146   84 CVGMQL 89
guaA_Nterm TIGR00888
GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; This protein of purine ...
331-526 5.21e-06

GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; This protein of purine de novo biosynthesis is well-conserved. However, it appears to split into two separate polypeptide chains in most of the Archaea. This N-terminal region would be the smaller subunit. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]


Pssm-ID: 129966 [Multi-domain]  Cd Length: 188  Bit Score: 47.31  E-value: 5.21e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 331 ANDLTAENVASRlaDADGIIVPGGFGQRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLHldgANSAELDPEt 410
Cdd:TIGR00888  29 PNTTPLEEIREK--NPKGIILSGGPSSVYAENAPRADEKIFELGVPVLGICYGMQLMAKQLGGEVGR---AEKREYGKA- 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 411 qypiidimrdQIDIEDMGGTLRlglypcKLKPGSKAAAAYGNqEVVQRrhrhryefntkfreqfeAEGFVFSGVSpDNRL 490
Cdd:TIGR00888 103 ----------ELEILDEDDLFR------GLPDESTVWMSHGD-KVKEL-----------------PEGFKVLATS-DNCP 147
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1997823619 491 MEVVELPDKKFFvAAQYHPE-YHSRpnHAEELYSAFV 526
Cdd:TIGR00888 148 VAAMAHEEKPIY-GVQFHPEvTHTE--YGNELLENFV 181
GuaA1 COG0518
GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP ...
343-386 8.26e-06

GMP synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism]; GMP synthase, glutamine amidotransferase domain is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 440284 [Multi-domain]  Cd Length: 225  Bit Score: 47.25  E-value: 8.26e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1997823619 343 LADADGIIVPGGF-----GQRGTEGKIQAIRYARENDVPMLGVCLGMQL 386
Cdd:COG0518    46 LEDPDGLILSGGPmsvydEDPWLEDEPALIREAFELGKPVLGICYGAQL 94
hisH PRK13181
imidazole glycerol phosphate synthase subunit HisH; Provisional
340-388 2.28e-05

imidazole glycerol phosphate synthase subunit HisH; Provisional


Pssm-ID: 183878 [Multi-domain]  Cd Length: 199  Bit Score: 45.24  E-value: 2.28e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1997823619 340 ASRLADADGIIVPG--GFGQrGTE-----GKIQAIRYARENDVPMLGVCLGMQLTC 388
Cdd:PRK13181   32 PEEIAGADKVILPGvgAFGQ-AMRslresGLDEALKEHVEKKQPVLGICLGMQLLF 86
hisH PRK13143
imidazole glycerol phosphate synthase subunit HisH; Provisional
343-386 2.37e-05

imidazole glycerol phosphate synthase subunit HisH; Provisional


Pssm-ID: 237289 [Multi-domain]  Cd Length: 200  Bit Score: 45.24  E-value: 2.37e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1997823619 343 LADADGIIVPG----GFGQRGTEGKIQAIRYARENDVPMLGVCLGMQL 386
Cdd:PRK13143   36 ILDADGIVLPGvgafGAAMENLSPLRDVILEAARSGKPFLGICLGMQL 83
GATase1_FGAR_AT cd01740
Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ...
329-386 3.45e-05

Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase; Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT). FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. FGAR-AT is a glutamine amidotransferase. Glutamine amidotransferase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. FGAR-AT belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site


Pssm-ID: 153211 [Multi-domain]  Cd Length: 238  Bit Score: 45.30  E-value: 3.45e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1997823619 329 VNANDLTAEnvASRLADADGIIVPGGF----------GQRGTEGKIQAIRYARENDVPMLGVCLGMQL 386
Cdd:cd01740    29 VWHNDLLAG--RKDLDDYDGVVLPGGFsygdylragaIAAASPLLMEEVKEFAERGGLVLGICNGFQI 94
SIMIBI cd01983
SIMIBI (signal recognition particle, MinD and BioD)-class NTPases; SIMIBI (after signal ...
3-109 1.03e-04

SIMIBI (signal recognition particle, MinD and BioD)-class NTPases; SIMIBI (after signal recognition particle, MinD, and BioD), consists of signal recognition particle (SRP) GTPases, the assemblage of MinD-like ATPases, which are involved in protein localization, chromosome partitioning, and membrane transport, and a group of metabolic enzymes with kinase or related phosphate transferase activity. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.


Pssm-ID: 349751 [Multi-domain]  Cd Length: 107  Bit Score: 41.65  E-value: 1.03e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619   3 KYIFVTGGVvSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINID-PGTMSPyqhgevyVTDDGAETDLDLG-HYERFID 80
Cdd:cd01983     1 RVIAVTGGK-GGVGKTTLAAALAVALAAKGYKVLLIDLDDYVLIDgGGGLET-------GLLLGTIVALLALkKADEVIV 72
                          90       100
                  ....*....|....*....|....*....
gi 1997823619  81 INLNKYSNVTTGKIYSEVLRKERKGEYLG 109
Cdd:cd01983    73 VVDPELGSLLEAVKLLLALLLLGIGIRPD 101
PRK00758 PRK00758
GMP synthase subunit A; Validated
332-395 1.05e-04

GMP synthase subunit A; Validated


Pssm-ID: 179112 [Multi-domain]  Cd Length: 184  Bit Score: 43.30  E-value: 1.05e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1997823619 332 NDLTAENVAsrlADADGIIVPGGfgqRGTEGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHV 395
Cdd:PRK00758   31 NTTPVEEIK---AFEDGLILSGG---PDIERAGNCPEYLKELDVPILGICLGHQLIAKAFGGEV 88
IMP_synth_hisH TIGR01855
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; This model ...
308-386 2.31e-04

imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; This model represents the glutamine amidotransferase subunit (or domain, in eukaryotic systems) of imidazole glycerol phosphate synthase. This subunit catalyzes step 5 of histidine biosynthesis from PRPP. The other subunit, the cyclase, catalyzes step 6. [Amino acid biosynthesis, Histidine family]


Pssm-ID: 273836 [Multi-domain]  Cd Length: 196  Bit Score: 42.31  E-value: 2.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1997823619 308 SVVEALKHSGLANDTTIDIDwvnandltaenvasRLADADGIIVPG--GFG---QRGTEGKIQAI-RYARENDVPMLGVC 381
Cdd:TIGR01855  13 SVKRALKRVGAEPVVVKDSK--------------EAELADKLILPGvgAFGaamARLRENGLDLFvELVVRLGKPVLGIC 78

                  ....*
gi 1997823619 382 LGMQL 386
Cdd:TIGR01855  79 LGMQL 83
GATase1_1 cd01741
Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group ...
319-386 2.29e-03

Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain; This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.


Pssm-ID: 153212 [Multi-domain]  Cd Length: 188  Bit Score: 39.15  E-value: 2.29e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1997823619 319 ANDTTIDIDWVnanDLTAENVASRLADADGIIVPGGFGQRGTEGK------IQAIRYARENDVPMLGVCLGMQL 386
Cdd:cd01741    23 AGAETIEIDVV---DVYAGELLPDLDDYDGLVILGGPMSVDEDDYpwlkklKELIRQALAAGKPVLGICLGHQL 93
GATase1_CobQ cd01750
Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ); Type ...
318-386 2.89e-03

Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ); Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). CobQ plays a role in cobalamin biosythesis. CobQ catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. CobQ belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobQ.


Pssm-ID: 153221 [Multi-domain]  Cd Length: 194  Bit Score: 39.15  E-value: 2.89e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1997823619 318 LANDTTIDIDWVNANDltaenvasRLADADGIIVPGGfgqRGTEGKI---------QAIRYARENDVPMLGVCLGMQL 386
Cdd:cd01750    18 LAREPGVDVRYVEVPE--------GLGDADLIILPGS---KDTIQDLawlrkrglaEAIKNYARAGGPVLGICGGYQM 84
PLN02617 PLN02617
imidazole glycerol phosphate synthase hisHF
343-386 5.10e-03

imidazole glycerol phosphate synthase hisHF


Pssm-ID: 178226 [Multi-domain]  Cd Length: 538  Bit Score: 39.69  E-value: 5.10e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1997823619 343 LADADGIIVPG--GFGQR----GTEGKIQAIRYARENDVPMLGVCLGMQL 386
Cdd:PLN02617   42 ILNADRLIFPGvgAFGSAmdvlNNRGMAEALREYIQNDRPFLGICLGLQL 91
GATase1_Anthranilate_Synthase cd01743
Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Type 1 ...
342-397 9.19e-03

Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase; Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase (ASase). This group contains proteins similar to para-aminobenzoate (PABA) synthase and ASase. These enzymes catalyze similar reactions and produce similar products, PABA and ortho-aminobenzoate (anthranilate). Each enzyme is composed of non-identical subunits: a glutamine amidotransferase subunit (component II) and a subunit that produces an aminobenzoate products (component I). ASase catalyses the synthesis of anthranilate from chorismate and glutamine and is a tetrameric protein comprising two copies each of components I and II. Component II of ASase belongs to the family of triad GTases which hydrolyze glutamine and transfer nascent ammonia between the active sites. In some bacteria, such as Escherichia coli, component II can be much larger than in other organisms, due to the presence of phosphoribosyl-anthranilate transferase (PRTase) activity. PRTase catalyses the second step in tryptophan biosynthesis and results in the addition of 5-phosphoribosyl-1-pyrophosphate to anthranilate to create N-5'-phosphoribosyl-anthranilate. In E.coli, the first step in the conversion of chorismate to PABA involves two proteins: PabA and PabB which co-operate to transfer the amide nitrogen of glutamine to chorismate forming 4-amino-4 deoxychorismate (ADC). PabA acts as a glutamine amidotransferase, supplying an amino group to PabB, which carries out the amination reaction. A third protein PabC then mediates elimination of pyruvate and aromatization to give PABA. Several organisms have bipartite proteins containing fused domains homologous to PabA and PabB commonly called PABA synthases. These hybrid PABA synthases may produce ADC and not PABA.


Pssm-ID: 153214 [Multi-domain]  Cd Length: 184  Bit Score: 37.51  E-value: 9.19e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1997823619 342 RLADADGIIV---PGgfgqRGTEGKI--QAIRYARENdVPMLGVCLGMQLTC------IEFARHVLH 397
Cdd:cd01743    39 ELLNPDAIVIspgPG----HPEDAGIslEIIRALAGK-VPILGVCLGHQAIAeafggkVVRAPEPMH 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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