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Conserved domains on  [gi|2018265504|ref|WP_208285472|]
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nitrate- and nitrite sensing domain-containing protein, partial [Salmonella sp. 32040203-2019-00032]

Protein Classification

nitrate- and nitrite sensing domain-containing protein( domain architecture ID 10551375)

nitrate- and nitrite sensing domain-containing protein containing a nitrate- and nitrite-sensing (NIT) domain, a module in bacterial sensory receptors; may be a partial protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NIT pfam08376
Nitrate and nitrite sensing; The nitrate- and nitrite sensing domain (NIT) is found in ...
 59-104 2.78e-09

Nitrate and nitrite sensing; The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.


:

Pssm-ID: 462453 [Multi-domain]  Cd Length: 227  Bit Score: 52.49  E-value: 2.78e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 2018265504  59 VHQLQSERGMSAGFIGA-RGQKFRDDLAAQRQLTDKVLATFKRLLTD 104
Cdd:pfam08376   1 VHALQKERGLSAGYLASgGGGRFAAELAAQRAATDAALAALRAALAE 47
 
Name Accession Description Interval E-value
NIT pfam08376
Nitrate and nitrite sensing; The nitrate- and nitrite sensing domain (NIT) is found in ...
 59-104 2.78e-09

Nitrate and nitrite sensing; The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.


Pssm-ID: 462453 [Multi-domain]  Cd Length: 227  Bit Score: 52.49  E-value: 2.78e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 2018265504  59 VHQLQSERGMSAGFIGA-RGQKFRDDLAAQRQLTDKVLATFKRLLTD 104
Cdd:pfam08376   1 VHALQKERGLSAGYLASgGGGRFAAELAAQRAATDAALAALRAALAE 47
 
Name Accession Description Interval E-value
NIT pfam08376
Nitrate and nitrite sensing; The nitrate- and nitrite sensing domain (NIT) is found in ...
 59-104 2.78e-09

Nitrate and nitrite sensing; The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.


Pssm-ID: 462453 [Multi-domain]  Cd Length: 227  Bit Score: 52.49  E-value: 2.78e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 2018265504  59 VHQLQSERGMSAGFIGA-RGQKFRDDLAAQRQLTDKVLATFKRLLTD 104
Cdd:pfam08376   1 VHALQKERGLSAGYLASgGGGRFAAELAAQRAATDAALAALRAALAE 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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