|
Name |
Accession |
Description |
Interval |
E-value |
| RHS_core |
NF041261 |
RHS element core protein; |
1064-1732 |
9.53e-36 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 149.00 E-value: 9.53e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1064 RYRYDAMGRLVETVQAAGTpQARttGMRYDAQ--GRLVGELSAQGAAQLASARAAGQGDAQLEAIwqqyGLSHTYDAAGR 1141
Cdd:NF041261 321 RYTYTEAGELLAVYDRSNT-QVR--AFTYDAQhpGRMVAHRYAGRPEMCYRYDDTGRVTEQLNPA----GLSYRYQYEQD 393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1142 RTSTTDQNGLKTQFFYDAASRLTHTVN---ALGEVTETRYDAFGQVQASIRHANRLDLFALANASGTPGGVTnagvlaal 1218
Cdd:NF041261 394 RITITDSLNRREVLHTEGEGGLKRVVKkehADGSVTRSGYDAAGRLTAQTDAAGRRTEYSLNVVSGDITDIT-------- 465
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1219 dkarndTAD-RTTGYRYNATGTLAQVTDALGFARNYVYNTFGEEVRRTG-SGQTVATAYD--HRGLAVqTVQDPDGlkAA 1294
Cdd:NF041261 466 ------TPDgRETKFYYNDGNQLTSVTSPDGLESRREYDEPGRLVSETSrSGETTRYRYDdpHSELPA-TTTDATG--ST 536
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1295 TSVTYDAFGRVTASTDALGATRTQAYDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYAYNPDERSLTVITP 1374
Cdd:NF041261 537 KQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISTYRRYDNRGQLTSVKDAQGRETRYEYNAAGDLTAVITP 616
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1375 EGIRVTTVHDRLGQTVAVTDGsGATTRYEYDADGHQTAVQTPL-ARTTGLYDVAGRLIQATDANGVMTLLGYDAAGRvLT 1453
Cdd:NF041261 617 DGNRSETQYDAWGKAVSTTQG-GLTRSMEYDAAGRITTLTNENgSHSTFLYDALDRLVQQRGFDGRTQRYHYDLTGK-LT 694
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1454 RTVDPlglNLVTRYTYDALGNQLSVTDAQGVVTQFGYDPKGQLirqavdptglnlvTTFAYDSAGRQVSVtdpngtvtRY 1533
Cdd:NF041261 695 QSEDE---GLVTLWHYDESDRITHRTVNGEPAEQWQYDEHGWL-------------TDISHLSEGHRVAV--------HY 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1534 EYDTLGRRVLE---VVDPSTAT--------HA--GLNLAKRYTYDALGHVTSATDAQGHT-------------TRYAYDA 1587
Cdd:NF041261 751 GYDDKGRLTGErqtVENPETGEllwqhetgHAynEQGLANRVTPDSLPPVEWLTYGSGYLagmklggtplveyTRDRLHR 830
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1588 EGRQRFVLDAAGNLAE--TAYDAAGRVVRQTRYAAVVPAPEGLPVNATEAQLNGLKrpdsaqdQTEHRIYDADNRVTATV 1665
Cdd:NF041261 831 ETVRSFGGAGSNAAYEltTAYTPAGQLQSQHLNSLVYDRDYTWNDNGDLVRISGPR-------QTREYGYSATGRLTGVH 903
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1666 NGAGDV---VRFAYDGAGRVIQRTAYAQRLAMASWavgtdpqPGTDAANSADMVTRtvYDAAGRVRYSID 1732
Cdd:NF041261 904 TTAANLdirIPYATDPAGNRLPDPELHPDSTLTAW-------PDNRIAEDAHYVYR--YDEYGRLTEKTD 964
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
1224-1821 |
2.02e-25 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 115.49 E-value: 2.02e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1224 DTADRTTGYRYNATGTLAQ----VTDALGFARNYVYNT---FGEEVR--RTGSGQTVATAYD------------------ 1276
Cdd:NF041261 214 DRFGRTLTFHREAAGDLAGeitgVTDGAGREFRLVLTTqaqRAEEARkqRTSSLSSPDGPRPlsssafpdtlpggteygp 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1277 HRGL---AVQTVQDP---DGLKAATSV--TYDAFGRVTASTDALGA-TRTQAYD--RLGRTIVLTDAMGRRSTSSYDAFG 1345
Cdd:NF041261 294 DNGIrlsAVWLTHDPaypESLPAAPLVryTYTEAGELLAVYDRSNTqVRAFTYDaqHPGRMVAHRYAGRPEMCYRYDDTG 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1346 RTVTQTDALGHTTTYAYnpdERSLTVITPEGIRVTTVHDR----LGQTVAVTDGSGATTRYEYDADGHQTAVQTPLARTT 1421
Cdd:NF041261 374 RVTEQLNPAGLSYRYQY---EQDRITITDSLNRREVLHTEgeggLKRVVKKEHADGSVTRSGYDAAGRLTAQTDAAGRRT 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1422 --GLYDVAGRLIQATDANGVMTLLGYDAaGRVLTRTVDPLGLNlvTRYTYDALGNQLSVTDAQGVVTQFGYD-PKGQLIR 1498
Cdd:NF041261 451 eySLNVVSGDITDITTPDGRETKFYYND-GNQLTSVTSPDGLE--SRREYDEPGRLVSETSRSGETTRYRYDdPHSELPA 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1499 QAVDPTGLNlvTTFAYDSAGRQVSVTDPNGTVTRYEYDTLGRRvlevvdpsTATHAGLNLAKRYTYDALGHVTSATDAQG 1578
Cdd:NF041261 528 TTTDATGST--KQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQM--------TAVHREEGISTYRRYDNRGQLTSVKDAQG 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1579 HTTRYAYDAEGRQRFVLDAAGNLAETAYDAAGRvvrqtryaavvpapeglPVNATEAQLnglkrpdsaqdqtehriydad 1658
Cdd:NF041261 598 RETRYEYNAAGDLTAVITPDGNRSETQYDAWGK-----------------AVSTTQGGL--------------------- 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1659 nrvtatvngagdvvrfaydgagrviqrtayaqrlamaswavgtdpqpgtdaansadmvTRTV-YDAAGRVRYSIDGTGAV 1737
Cdd:NF041261 640 ----------------------------------------------------------TRSMeYDAAGRITTLTNENGSH 661
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1738 VSQRYDGNGNVTQRIRYARRLDLASQPLSANPSESEMElRLVyifdaqrdehTRMRYDAAGRLTLSADGAGGVSQYLYDK 1817
Cdd:NF041261 662 STFLYDALDRLVQQRGFDGRTQRYHYDLTGKLTQSEDE-GLV----------TLWHYDESDRITHRTVNGEPAEQWQYDE 730
|
....
gi 2023408248 1818 AGHL 1821
Cdd:NF041261 731 HGWL 734
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
861-1568 |
5.31e-20 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 97.77 E-value: 5.31e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 861 RFRAVYLgddTHSGSTSGTLNGQPLSGEVLSP--QVRSTQDRTASQIHG--RDGLLLGTVDGEGYL----TEYRYDAAGR 932
Cdd:NF041261 298 RLSAVWL---THDPAYPESLPAAPLVRYTYTEagELLAVYDRSNTQVRAftYDAQHPGRMVAHRYAgrpeMCYRYDDTGR 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 933 VIGSVRYAQPVAGGAAAGLAAARAGSLS-----------GLR---PASSAGDAHTATFYDAQGRRVGELDAEGYLTQSSY 998
Cdd:NF041261 375 VTEQLNPAGLSYRYQYEQDRITITDSLNrrevlhtegegGLKrvvKKEHADGSVTRSGYDAAGRLTAQTDAAGRRTEYSL 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 999 DANGNLATvrRYATAVGSTTAAQVTAATRLEDLlpgISTQDQVSTRTYDALNRVVLSVNAEGTATRYRYD-AMGRLVETV 1077
Cdd:NF041261 455 NVVSGDIT--DITTPDGRETKFYYNDGNQLTSV---TSPDGLESRREYDEPGRLVSETSRSGETTRYRYDdPHSELPATT 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1078 QAAGTPQARTTGMRYdaqGRLVGELSAQGAAQLASARAAGqgdaQLEAIWQQYGLS--HTYDAAGRRTSTTDQNGLKTQF 1155
Cdd:NF041261 530 TDATGSTKQMTWSRY---GQLLAFTDCSGYQTRYEYDRFG----QMTAVHREEGIStyRRYDNRGQLTSVKDAQGRETRY 602
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1156 FYDAASRLTHTVNALGEVTETRYDAFGQ----VQASIRHANRLDLFALANASGTPGGVTNAGVLAALDKARNDTA--DRT 1229
Cdd:NF041261 603 EYNAAGDLTAVITPDGNRSETQYDAWGKavstTQGGLTRSMEYDAAGRITTLTNENGSHSTFLYDALDRLVQQRGfdGRT 682
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1230 TGYRYNATGTLAQVTDAlGFARNYVYNTFGEEVRRTGSGQTVAT-AYDHRGLAVQTVQDPDGLKAATSVTYDAFGRVTas 1308
Cdd:NF041261 683 QRYHYDLTGKLTQSEDE-GLVTLWHYDESDRITHRTVNGEPAEQwQYDEHGWLTDISHLSEGHRVAVHYGYDDKGRLT-- 759
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1309 tdalgatrtqaydrlgrtivltdamGRRSTSSYDAFGRTVTQtdalgHTTTYAYNpdERSL-TVITPEGIR--------- 1378
Cdd:NF041261 760 -------------------------GERQTVENPETGELLWQ-----HETGHAYN--EQGLaNRVTPDSLPpvewltygs 807
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1379 -------------VTTVHDRLG-QTVAVTDGSGATTRYE----YDADGHQTA--VQTPLARTTGLYDVAGRLIQATDANG 1438
Cdd:NF041261 808 gylagmklggtplVEYTRDRLHrETVRSFGGAGSNAAYElttaYTPAGQLQSqhLNSLVYDRDYTWNDNGDLVRISGPRQ 887
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1439 VMTlLGYDAAGRVLTRTVDPLGLNLVTRYTYDALGNQLSVTDAQGVVTQFGYdPKGQLIRQAvdptglnlVTTFAYDSAG 1518
Cdd:NF041261 888 TRE-YGYSATGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLTAW-PDNRIAEDA--------HYVYRYDEYG 957
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2023408248 1519 RQVSVTD--PNGTVT-------RYEYDTLGRRVLEvvdpSTATHAGLNLAKRYTYDALG 1568
Cdd:NF041261 958 RLTEKTDriPEGVIRtdderthHYHYDSQHRLVFY----TRIQHGEPLVESRYLYDPLG 1012
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
1364-1823 |
7.49e-19 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 93.91 E-value: 7.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1364 PDERSLTVITPEGIRVTTVH-----DRLGQTVAVTDGSGATTRYEYDADGhQTAVQTPLARTTGLYDVAGRLiQATDANG 1438
Cdd:NF041261 204 PPYRVLTGMVDRFGRTLTFHreaagDLAGEITGVTDGAGREFRLVLTTQA-QRAEEARKQRTSSLSSPDGPR-PLSSSAF 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1439 VMTLLGYDAAGR-------VLTRTVDP-----LGLNLVTRYTYDALGNQLSVTDAQGV-VTQFGYDPK--GQLI--RQAV 1501
Cdd:NF041261 282 PDTLPGGTEYGPdngirlsAVWLTHDPaypesLPAAPLVRYTYTEAGELLAVYDRSNTqVRAFTYDAQhpGRMVahRYAG 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1502 DPTglnlvTTFAYDSAGRQVSVTDPNGTVTRYEY--------DTLGRRvlEVVdpSTATHAGLnlaKRytydalghVTSA 1573
Cdd:NF041261 362 RPE-----MCYRYDDTGRVTEQLNPAGLSYRYQYeqdrititDSLNRR--EVL--HTEGEGGL---KR--------VVKK 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1574 TDAQGHTTRYAYDAEGRQRFVLDAAGNLAETAYD-AAGRVVRQTryaavvpAPEGLPVN---ATEAQLNGLKRPDSAQDQ 1649
Cdd:NF041261 422 EHADGSVTRSGYDAAGRLTAQTDAAGRRTEYSLNvVSGDITDIT-------TPDGRETKfyyNDGNQLTSVTSPDGLESR 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1650 TEhriYDADNRVTATVNGAGDVVRFAYD--------------GAGRVIQRTAYAQRLAMaswavgtdpqpgTDAANsadM 1715
Cdd:NF041261 495 RE---YDEPGRLVSETSRSGETTRYRYDdphselpatttdatGSTKQMTWSRYGQLLAF------------TDCSG---Y 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1716 VTRTVYDAAGRVRYSIDGTGAVVSQRYDGNGNVTQ---------RIRYARRLDL-ASQPLSANPSESEMELRLVYIFDAQ 1785
Cdd:NF041261 557 QTRYEYDRFGQMTAVHREEGISTYRRYDNRGQLTSvkdaqgretRYEYNAAGDLtAVITPDGNRSETQYDAWGKAVSTTQ 636
|
490 500 510
....*....|....*....|....*....|....*...
gi 2023408248 1786 RDEHTRMRYDAAGRLTLSADGAGGVSQYLYDKAGHLLQ 1823
Cdd:NF041261 637 GGLTRSMEYDAAGRITTLTNENGSHSTFLYDALDRLVQ 674
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
723-1610 |
6.67e-18 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 90.59 E-value: 6.67e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 723 DIAITVGGGASGIVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGSAQLGFVLTLTPPQGSTAVVLS 802
Cdd:COG3209 40 KGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLV 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 803 ATPNRTAQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSADRFRAVYLGDDTHSGSTSGTLNG 882
Cdd:COG3209 120 STGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSA 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 883 QPLSGEVLSPQVRSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQPVAGGAAAGLAAARAGSLSGL 962
Cdd:COG3209 200 LLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTG 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 963 RPASSAGDAHTATFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQVTAATRLEDLLPGISTQDQVS 1042
Cdd:COG3209 280 TGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGG 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1043 TRTYDALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAGTPQARTTGMRYDAQGRLVGELSAQGAAQLASARAAGQGDAQ 1122
Cdd:COG3209 360 YGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGG 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1123 LEAIWQQYGLSHTYDAAGRRTSTTDQNGLKTQFFYDAASRLTHTVNALGEVTETRYDAFGQVQASIRHANRLDLFALANA 1202
Cdd:COG3209 440 GGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGL 519
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1203 SGTPGGVTNAGVLAALDKARNDTADRTTGYRYNATGTLAQVTDALGFARNYVYNTFGEEVRRTGSGQTVATAYDHRGLAV 1282
Cdd:COG3209 520 VVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTT 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1283 QTVQDPDGLKAATSVTYDAFGRVTASTDALGATRTQAYDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYAY 1362
Cdd:COG3209 600 TSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATG 679
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1363 NPDERSLTVITPEGIRVTTVHDRLGQTVAVTDGSGATTRYEYDADGHQTAVQTPLARTTGLYDVAGRLIQATDANGVMTL 1442
Cdd:COG3209 680 GTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALT 759
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1443 LGYDAAGRVLTRTVD--PLGLNLVTRYTYDALGNQLSVTDAQGVVTQFGYDPKGQL---IRQAVDPTGLNLVTTFAYDSA 1517
Cdd:COG3209 760 YTYDALGRLTSETTPggVTQGTYTTRYTYDALGRLTSVTYPDGETVTYTYDALGRLtsvITVGSGGGTDLQDRTYTYDAA 839
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1518 GRQVSVTD---PNGTVTRYEYDTLGrRVLEVVDPSTAThaglnlakRYTYDALGHVTSATDAQghTTRYAYDAEGRQRFV 1594
Cdd:COG3209 840 GNITSITDalrAGTLTQTYTYDALG-RLTSATDPGTTE--------SYTYDANGNLTSRTDGG--TTTYTYDALGRLVSV 908
|
890
....*....|....*.
gi 2023408248 1595 LDAAGNLAETAYDAAG 1610
Cdd:COG3209 909 TKPDGTTTTYTYDALG 924
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
542-1529 |
9.90e-14 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 77.10 E-value: 9.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 542 ATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVALSS 621
Cdd:COG3209 1 ETSLGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 622 SATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALAQT 701
Cdd:COG3209 81 TALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 702 VTPAGSVVLGLASDASLAQGQDIAITVGGGASGIVTlvDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGS 781
Cdd:COG3209 161 LAGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLA--GSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 782 AQLGFVLTLTPPQGSTAVVLSATPNRTAQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSADR 861
Cdd:COG3209 239 TGSATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 862 FRAVYLGDDTHSGSTSGTLNGQPLSGEVLSPQVRSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQ 941
Cdd:COG3209 319 GTTGTAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGS 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 942 PVAGGAAAGLAAARAGSLSGLRPASSAGDAHTATFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQ 1021
Cdd:COG3209 399 STTGVGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTE 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1022 VTAATRLEDLLPGISTQDQVSTRTYDALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAGTPQARTTGMRYDAQGRLVGE 1101
Cdd:COG3209 479 AGTGGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGT 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1102 LSAQGAAQLASARAAGQGDAQLEAIWQQYGLSHTYDAAGRRTSTTDQNGLKTQFFYDAASRLTHTVNALGEVTETRYDAF 1181
Cdd:COG3209 559 STGTGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTG 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1182 GQVQASIRHANRLDLFALANASGTPGGVTNAGVLAALDKARNDTADRTTGYRYNATGTLAQVTDALGFARNYVYNTFGEE 1261
Cdd:COG3209 639 STTGGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTR 718
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1262 VRRTGSGQTVATAYDHRGLAVQTVQDPDGLKAAT------SVTYDAFGRVTASTDALGATrtqaydrlgrtivltdAMGR 1335
Cdd:COG3209 719 LGTTTTGGGGGTTTDGTGTGGTTGTLTTTSTTTTttagalTYTYDALGRLTSETTPGGVT----------------QGTY 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1336 RSTSSYDAFGRTVTQTDALGHTTTYAYNPDERSLTVITPEGIRVTTVHDRlgqtvavtdgsgattRYEYDADGHQTAVQT 1415
Cdd:COG3209 783 TTRYTYDALGRLTSVTYPDGETVTYTYDALGRLTSVITVGSGGGTDLQDR---------------TYTYDAAGNITSITD 847
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1416 PLARTTGL----YDVAGRLIQATDANGVMTlLGYDAAGRVLTRTVDPlglnlVTRYTYDALGNQLSVTDAQGVVTQFGYD 1491
Cdd:COG3209 848 ALRAGTLTqtytYDALGRLTSATDPGTTES-YTYDANGNLTSRTDGG-----TTTYTYDALGRLVSVTKPDGTTTTYTYD 921
|
970 980 990 1000
....*....|....*....|....*....|....*....|...
gi 2023408248 1492 PKGQL-----IRQAVDPTGlNLVTTFAYDSAGRQVSVTDPNGT 1529
Cdd:COG3209 922 ALGHTdhlgsVRALTDASG-QVVWRYDYDPFGNLLAETSGAAA 963
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
65-887 |
2.30e-11 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 69.41 E-value: 2.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 65 AADNTASSIDWAIHVTGGTGS-AVELYHRGVLVANVGAVAAGDVLGLSYAGGVLSYSKNGVVLRQDAVQIDQPLYLDSSF 143
Cdd:COG3210 800 ADGTITAAGTTAINVTGSGGTiTINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITV 879
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 144 YAPGSSVSGLEFRDGTGTLTALSAKPVATGRVTFYGGGAVLGTATLVDGVASLTTQALINAGTASITAAYEGDGTNAAST 223
Cdd:COG3210 880 GSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASA 959
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 224 SAAMALAVGGGAGNRPATTTSLSASSTSTSRGQEVALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVGAQ 303
Cdd:COG3210 960 SDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAAT 1039
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 304 AWRAVYSG----DAQSAPSTSASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVA 379
Cdd:COG3210 1040 AGGQNGVGvnasGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTAS 1119
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 380 TVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTV 459
Cdd:COG3210 1120 KVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLK 1199
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 460 AFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLV 539
Cdd:COG3210 1200 GGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGA 1279
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 540 LDATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVAL 619
Cdd:COG3210 1280 TATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGAT 1359
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 620 SSSATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALA 699
Cdd:COG3210 1360 DSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGN 1439
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 700 QTVTPAGSVVLGLASDASLAQGQDIAITVGGGASGIVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGF 779
Cdd:COG3210 1440 TTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEV 1519
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 780 GSAQLGFVLTLTPPQGSTAVVLSATPNRTAQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSA 859
Cdd:COG3210 1520 AKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTL 1599
|
810 820
....*....|....*....|....*...
gi 2023408248 860 DRFRAVYLGDDTHSGSTSGTLNGQPLSG 887
Cdd:COG3210 1600 SLAEGTNAEYGGTTNVTSGTAGNAGATG 1627
|
|
| Big_3_5 |
pfam16640 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
623-705 |
1.39e-10 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold.
Pssm-ID: 406933 [Multi-domain] Cd Length: 90 Bit Score: 59.57 E-value: 1.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 623 ATSVGTDAPVTLSARVT---GRQPGGTVTFLRGDTVLGTAQ--VFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPA 697
Cdd:pfam16640 1 PTSVTYGQSVTLTATVTpasGGTPTGTVTFTDGGTVLGTAVlvSGNGVATLTTTALAAGTHTITATYSGDANYAASTSSA 80
|
....*...
gi 2023408248 698 LAQTVTPA 705
Cdd:pfam16640 81 VTVTVTKA 88
|
|
| Big_3_5 |
pfam16640 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
434-523 |
1.08e-08 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold.
Pssm-ID: 406933 [Multi-domain] Cd Length: 90 Bit Score: 54.17 E-value: 1.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 434 PSSAVYGSPVTLSATAPYSSSTV--GTVAFYAGDLLVGVAT-VQPNGVATLVSSALPVGSRTITAAFSGNAGTEPpsrST 510
Cdd:pfam16640 1 PTSVTYGQSVTLTATVTPASGGTptGTVTFTDGGTVLGTAVlVSGNGVATLTTTALAAGTHTITATYSGDANYAA---ST 77
|
90
....*....|...
gi 2023408248 511 AAPLTITGTATQT 523
Cdd:pfam16640 78 SSAVTVTVTKAAT 90
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
896-1492 |
1.73e-08 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 60.02 E-value: 1.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 896 STQDRTASQIH---GRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYaqpvaggaaaglaaaragslSGLRPASSagdah 972
Cdd:NF041261 528 TTTDATGSTKQmtwSRYGQLLAFTDCSGYQTRYEYDRFGQMTAVHRE--------------------EGISTYRR----- 582
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 973 tatfYDAQGRRVGELDAEGYLTQSSYDANGNLATV-----RRYAT---AVGSTTAAQVTAATR-LEDLLPG-----ISTQ 1038
Cdd:NF041261 583 ----YDNRGQLTSVKDAQGRETRYEYNAAGDLTAVitpdgNRSETqydAWGKAVSTTQGGLTRsMEYDAAGrittlTNEN 658
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1039 DQVSTRTYDALNRVVLSVNAEGTATRYRYDAMGRLVETvqaagTPQARTTGMRYDAQGRLV-----GELSAQGAAQLASA 1113
Cdd:NF041261 659 GSHSTFLYDALDRLVQQRGFDGRTQRYHYDLTGKLTQS-----EDEGLVTLWHYDESDRIThrtvnGEPAEQWQYDEHGW 733
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1114 RAAGQGDAQLEAIWQQYGlshtYDAAGRRTS--TTDQNGLKTQFFYDAASRltHTVNALGEVTETRYDAFGQVQasirha 1191
Cdd:NF041261 734 LTDISHLSEGHRVAVHYG----YDDKGRLTGerQTVENPETGELLWQHETG--HAYNEQGLANRVTPDSLPPVE------ 801
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1192 nrldlfALANASGTPGGVTNAG---VLAALDKARNDT------ADRTTGYRYNATGTLA-----QVTDALGFARNYVYNT 1257
Cdd:NF041261 802 ------WLTYGSGYLAGMKLGGtplVEYTRDRLHRETvrsfggAGSNAAYELTTAYTPAgqlqsQHLNSLVYDRDYTWND 875
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1258 FGEEVRRTGSGQTvataydhrglavqtvqdpdglkaaTSVTYDAFGRVTastdalgATRTQAYDRLGRTIVLTDAMGRR- 1336
Cdd:NF041261 876 NGDLVRISGPRQT------------------------REYGYSATGRLT-------GVHTTAANLDIRIPYATDPAGNRl 924
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1337 -STSSYDAFGRTVTQTDALGHTTTYAYNPDERSltvitpegiRVTTVHDRLGQTVAVTDGSgATTRYEYDADG---HQTA 1412
Cdd:NF041261 925 pDPELHPDSTLTAWPDNRIAEDAHYVYRYDEYG---------RLTEKTDRIPEGVIRTDDE-RTHHYHYDSQHrlvFYTR 994
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1413 VQ--TPLARTTGLYDVAGRLIqatdangvmtllgydaAGRVLTRTVDPLG-LNL-----VTRYTYDalGNQLSVTDAQGV 1484
Cdd:NF041261 995 IQhgEPLVESRYLYDPLGRRM----------------AKRVWRRERDLTGwMSLsrkpeVTWYGWD--GDRLTTVQTDTT 1056
|
....*...
gi 2023408248 1485 VTQFGYDP 1492
Cdd:NF041261 1057 RIQTVYQP 1064
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1514-1549 |
9.53e-06 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 44.13 E-value: 9.53e-06
10 20 30
....*....|....*....|....*....|....*.
gi 2023408248 1514 YDSAGRQVSVTDPNGTVTRYEYDTLGRRVlEVVDPS 1549
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLT-AVTDPD 35
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1299-1337 |
3.18e-04 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 39.88 E-value: 3.18e-04
10 20 30
....*....|....*....|....*....|....*....
gi 2023408248 1299 YDAFGRVTASTDALGATRTQAYDRLGRTIVLTDAMGRRS 1337
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLVEITDADGGST 39
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1046-1081 |
8.33e-04 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 38.73 E-value: 8.33e-04
10 20 30
....*....|....*....|....*....|....*.
gi 2023408248 1046 YDALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAG 1081
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLVEITDADG 36
|
|
| PRK12688 |
PRK12688 |
flagellin; Reviewed |
318-565 |
1.19e-03 |
|
flagellin; Reviewed
Pssm-ID: 171664 [Multi-domain] Cd Length: 751 Bit Score: 43.71 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 318 STSASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVAGLRP-GGTVTFYNNGAPIAGGVATVVDGVASLSVTLPSGS 396
Cdd:PRK12688 106 STKSNVSTTISGATADDLRGTTSYASATASSNVLYDGAAGGATAaTGATTLGGTAGSLAGTGATAGDGTTALTGTITLIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 397 AGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLS-ATAPYSSSTV----GTVA--FYAGDLLVG 469
Cdd:PRK12688 186 TNGTTATGLLGNAQPADGDTLTVNGKTITFRSGAAPASTAVPSGSGVSGNlVTDGNGNSTVylgsATVNdlLSAIDLASG 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 470 VATVQ-PNGVATLVSSALPVGSRTITaafsgnAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGG 548
Cdd:PRK12688 266 VQTVTiSSGAATIAVSASGGAVSAAA------AGAVTLKSSTGADLSVTGKADLLKALGLTTATGAGNATVNANRTTSAG 339
|
250
....*....|....*..
gi 2023408248 549 RNAGIagsvrFYAGSTL 565
Cdd:PRK12688 340 SLGAL-----IQDGSTL 351
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| RHS_core |
NF041261 |
RHS element core protein; |
1064-1732 |
9.53e-36 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 149.00 E-value: 9.53e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1064 RYRYDAMGRLVETVQAAGTpQARttGMRYDAQ--GRLVGELSAQGAAQLASARAAGQGDAQLEAIwqqyGLSHTYDAAGR 1141
Cdd:NF041261 321 RYTYTEAGELLAVYDRSNT-QVR--AFTYDAQhpGRMVAHRYAGRPEMCYRYDDTGRVTEQLNPA----GLSYRYQYEQD 393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1142 RTSTTDQNGLKTQFFYDAASRLTHTVN---ALGEVTETRYDAFGQVQASIRHANRLDLFALANASGTPGGVTnagvlaal 1218
Cdd:NF041261 394 RITITDSLNRREVLHTEGEGGLKRVVKkehADGSVTRSGYDAAGRLTAQTDAAGRRTEYSLNVVSGDITDIT-------- 465
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1219 dkarndTAD-RTTGYRYNATGTLAQVTDALGFARNYVYNTFGEEVRRTG-SGQTVATAYD--HRGLAVqTVQDPDGlkAA 1294
Cdd:NF041261 466 ------TPDgRETKFYYNDGNQLTSVTSPDGLESRREYDEPGRLVSETSrSGETTRYRYDdpHSELPA-TTTDATG--ST 536
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1295 TSVTYDAFGRVTASTDALGATRTQAYDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYAYNPDERSLTVITP 1374
Cdd:NF041261 537 KQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISTYRRYDNRGQLTSVKDAQGRETRYEYNAAGDLTAVITP 616
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1375 EGIRVTTVHDRLGQTVAVTDGsGATTRYEYDADGHQTAVQTPL-ARTTGLYDVAGRLIQATDANGVMTLLGYDAAGRvLT 1453
Cdd:NF041261 617 DGNRSETQYDAWGKAVSTTQG-GLTRSMEYDAAGRITTLTNENgSHSTFLYDALDRLVQQRGFDGRTQRYHYDLTGK-LT 694
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1454 RTVDPlglNLVTRYTYDALGNQLSVTDAQGVVTQFGYDPKGQLirqavdptglnlvTTFAYDSAGRQVSVtdpngtvtRY 1533
Cdd:NF041261 695 QSEDE---GLVTLWHYDESDRITHRTVNGEPAEQWQYDEHGWL-------------TDISHLSEGHRVAV--------HY 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1534 EYDTLGRRVLE---VVDPSTAT--------HA--GLNLAKRYTYDALGHVTSATDAQGHT-------------TRYAYDA 1587
Cdd:NF041261 751 GYDDKGRLTGErqtVENPETGEllwqhetgHAynEQGLANRVTPDSLPPVEWLTYGSGYLagmklggtplveyTRDRLHR 830
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1588 EGRQRFVLDAAGNLAE--TAYDAAGRVVRQTRYAAVVPAPEGLPVNATEAQLNGLKrpdsaqdQTEHRIYDADNRVTATV 1665
Cdd:NF041261 831 ETVRSFGGAGSNAAYEltTAYTPAGQLQSQHLNSLVYDRDYTWNDNGDLVRISGPR-------QTREYGYSATGRLTGVH 903
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1666 NGAGDV---VRFAYDGAGRVIQRTAYAQRLAMASWavgtdpqPGTDAANSADMVTRtvYDAAGRVRYSID 1732
Cdd:NF041261 904 TTAANLdirIPYATDPAGNRLPDPELHPDSTLTAW-------PDNRIAEDAHYVYR--YDEYGRLTEKTD 964
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
1224-1821 |
2.02e-25 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 115.49 E-value: 2.02e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1224 DTADRTTGYRYNATGTLAQ----VTDALGFARNYVYNT---FGEEVR--RTGSGQTVATAYD------------------ 1276
Cdd:NF041261 214 DRFGRTLTFHREAAGDLAGeitgVTDGAGREFRLVLTTqaqRAEEARkqRTSSLSSPDGPRPlsssafpdtlpggteygp 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1277 HRGL---AVQTVQDP---DGLKAATSV--TYDAFGRVTASTDALGA-TRTQAYD--RLGRTIVLTDAMGRRSTSSYDAFG 1345
Cdd:NF041261 294 DNGIrlsAVWLTHDPaypESLPAAPLVryTYTEAGELLAVYDRSNTqVRAFTYDaqHPGRMVAHRYAGRPEMCYRYDDTG 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1346 RTVTQTDALGHTTTYAYnpdERSLTVITPEGIRVTTVHDR----LGQTVAVTDGSGATTRYEYDADGHQTAVQTPLARTT 1421
Cdd:NF041261 374 RVTEQLNPAGLSYRYQY---EQDRITITDSLNRREVLHTEgeggLKRVVKKEHADGSVTRSGYDAAGRLTAQTDAAGRRT 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1422 --GLYDVAGRLIQATDANGVMTLLGYDAaGRVLTRTVDPLGLNlvTRYTYDALGNQLSVTDAQGVVTQFGYD-PKGQLIR 1498
Cdd:NF041261 451 eySLNVVSGDITDITTPDGRETKFYYND-GNQLTSVTSPDGLE--SRREYDEPGRLVSETSRSGETTRYRYDdPHSELPA 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1499 QAVDPTGLNlvTTFAYDSAGRQVSVTDPNGTVTRYEYDTLGRRvlevvdpsTATHAGLNLAKRYTYDALGHVTSATDAQG 1578
Cdd:NF041261 528 TTTDATGST--KQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQM--------TAVHREEGISTYRRYDNRGQLTSVKDAQG 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1579 HTTRYAYDAEGRQRFVLDAAGNLAETAYDAAGRvvrqtryaavvpapeglPVNATEAQLnglkrpdsaqdqtehriydad 1658
Cdd:NF041261 598 RETRYEYNAAGDLTAVITPDGNRSETQYDAWGK-----------------AVSTTQGGL--------------------- 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1659 nrvtatvngagdvvrfaydgagrviqrtayaqrlamaswavgtdpqpgtdaansadmvTRTV-YDAAGRVRYSIDGTGAV 1737
Cdd:NF041261 640 ----------------------------------------------------------TRSMeYDAAGRITTLTNENGSH 661
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1738 VSQRYDGNGNVTQRIRYARRLDLASQPLSANPSESEMElRLVyifdaqrdehTRMRYDAAGRLTLSADGAGGVSQYLYDK 1817
Cdd:NF041261 662 STFLYDALDRLVQQRGFDGRTQRYHYDLTGKLTQSEDE-GLV----------TLWHYDESDRITHRTVNGEPAEQWQYDE 730
|
....
gi 2023408248 1818 AGHL 1821
Cdd:NF041261 731 HGWL 734
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
861-1568 |
5.31e-20 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 97.77 E-value: 5.31e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 861 RFRAVYLgddTHSGSTSGTLNGQPLSGEVLSP--QVRSTQDRTASQIHG--RDGLLLGTVDGEGYL----TEYRYDAAGR 932
Cdd:NF041261 298 RLSAVWL---THDPAYPESLPAAPLVRYTYTEagELLAVYDRSNTQVRAftYDAQHPGRMVAHRYAgrpeMCYRYDDTGR 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 933 VIGSVRYAQPVAGGAAAGLAAARAGSLS-----------GLR---PASSAGDAHTATFYDAQGRRVGELDAEGYLTQSSY 998
Cdd:NF041261 375 VTEQLNPAGLSYRYQYEQDRITITDSLNrrevlhtegegGLKrvvKKEHADGSVTRSGYDAAGRLTAQTDAAGRRTEYSL 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 999 DANGNLATvrRYATAVGSTTAAQVTAATRLEDLlpgISTQDQVSTRTYDALNRVVLSVNAEGTATRYRYD-AMGRLVETV 1077
Cdd:NF041261 455 NVVSGDIT--DITTPDGRETKFYYNDGNQLTSV---TSPDGLESRREYDEPGRLVSETSRSGETTRYRYDdPHSELPATT 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1078 QAAGTPQARTTGMRYdaqGRLVGELSAQGAAQLASARAAGqgdaQLEAIWQQYGLS--HTYDAAGRRTSTTDQNGLKTQF 1155
Cdd:NF041261 530 TDATGSTKQMTWSRY---GQLLAFTDCSGYQTRYEYDRFG----QMTAVHREEGIStyRRYDNRGQLTSVKDAQGRETRY 602
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1156 FYDAASRLTHTVNALGEVTETRYDAFGQ----VQASIRHANRLDLFALANASGTPGGVTNAGVLAALDKARNDTA--DRT 1229
Cdd:NF041261 603 EYNAAGDLTAVITPDGNRSETQYDAWGKavstTQGGLTRSMEYDAAGRITTLTNENGSHSTFLYDALDRLVQQRGfdGRT 682
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1230 TGYRYNATGTLAQVTDAlGFARNYVYNTFGEEVRRTGSGQTVAT-AYDHRGLAVQTVQDPDGLKAATSVTYDAFGRVTas 1308
Cdd:NF041261 683 QRYHYDLTGKLTQSEDE-GLVTLWHYDESDRITHRTVNGEPAEQwQYDEHGWLTDISHLSEGHRVAVHYGYDDKGRLT-- 759
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1309 tdalgatrtqaydrlgrtivltdamGRRSTSSYDAFGRTVTQtdalgHTTTYAYNpdERSL-TVITPEGIR--------- 1378
Cdd:NF041261 760 -------------------------GERQTVENPETGELLWQ-----HETGHAYN--EQGLaNRVTPDSLPpvewltygs 807
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1379 -------------VTTVHDRLG-QTVAVTDGSGATTRYE----YDADGHQTA--VQTPLARTTGLYDVAGRLIQATDANG 1438
Cdd:NF041261 808 gylagmklggtplVEYTRDRLHrETVRSFGGAGSNAAYElttaYTPAGQLQSqhLNSLVYDRDYTWNDNGDLVRISGPRQ 887
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1439 VMTlLGYDAAGRVLTRTVDPLGLNLVTRYTYDALGNQLSVTDAQGVVTQFGYdPKGQLIRQAvdptglnlVTTFAYDSAG 1518
Cdd:NF041261 888 TRE-YGYSATGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLTAW-PDNRIAEDA--------HYVYRYDEYG 957
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2023408248 1519 RQVSVTD--PNGTVT-------RYEYDTLGRRVLEvvdpSTATHAGLNLAKRYTYDALG 1568
Cdd:NF041261 958 RLTEKTDriPEGVIRtdderthHYHYDSQHRLVFY----TRIQHGEPLVESRYLYDPLG 1012
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
1364-1823 |
7.49e-19 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 93.91 E-value: 7.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1364 PDERSLTVITPEGIRVTTVH-----DRLGQTVAVTDGSGATTRYEYDADGhQTAVQTPLARTTGLYDVAGRLiQATDANG 1438
Cdd:NF041261 204 PPYRVLTGMVDRFGRTLTFHreaagDLAGEITGVTDGAGREFRLVLTTQA-QRAEEARKQRTSSLSSPDGPR-PLSSSAF 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1439 VMTLLGYDAAGR-------VLTRTVDP-----LGLNLVTRYTYDALGNQLSVTDAQGV-VTQFGYDPK--GQLI--RQAV 1501
Cdd:NF041261 282 PDTLPGGTEYGPdngirlsAVWLTHDPaypesLPAAPLVRYTYTEAGELLAVYDRSNTqVRAFTYDAQhpGRMVahRYAG 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1502 DPTglnlvTTFAYDSAGRQVSVTDPNGTVTRYEY--------DTLGRRvlEVVdpSTATHAGLnlaKRytydalghVTSA 1573
Cdd:NF041261 362 RPE-----MCYRYDDTGRVTEQLNPAGLSYRYQYeqdrititDSLNRR--EVL--HTEGEGGL---KR--------VVKK 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1574 TDAQGHTTRYAYDAEGRQRFVLDAAGNLAETAYD-AAGRVVRQTryaavvpAPEGLPVN---ATEAQLNGLKRPDSAQDQ 1649
Cdd:NF041261 422 EHADGSVTRSGYDAAGRLTAQTDAAGRRTEYSLNvVSGDITDIT-------TPDGRETKfyyNDGNQLTSVTSPDGLESR 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1650 TEhriYDADNRVTATVNGAGDVVRFAYD--------------GAGRVIQRTAYAQRLAMaswavgtdpqpgTDAANsadM 1715
Cdd:NF041261 495 RE---YDEPGRLVSETSRSGETTRYRYDdphselpatttdatGSTKQMTWSRYGQLLAF------------TDCSG---Y 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1716 VTRTVYDAAGRVRYSIDGTGAVVSQRYDGNGNVTQ---------RIRYARRLDL-ASQPLSANPSESEMELRLVYIFDAQ 1785
Cdd:NF041261 557 QTRYEYDRFGQMTAVHREEGISTYRRYDNRGQLTSvkdaqgretRYEYNAAGDLtAVITPDGNRSETQYDAWGKAVSTTQ 636
|
490 500 510
....*....|....*....|....*....|....*...
gi 2023408248 1786 RDEHTRMRYDAAGRLTLSADGAGGVSQYLYDKAGHLLQ 1823
Cdd:NF041261 637 GGLTRSMEYDAAGRITTLTNENGSHSTFLYDALDRLVQ 674
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
723-1610 |
6.67e-18 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 90.59 E-value: 6.67e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 723 DIAITVGGGASGIVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGSAQLGFVLTLTPPQGSTAVVLS 802
Cdd:COG3209 40 KGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLV 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 803 ATPNRTAQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSADRFRAVYLGDDTHSGSTSGTLNG 882
Cdd:COG3209 120 STGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSA 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 883 QPLSGEVLSPQVRSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQPVAGGAAAGLAAARAGSLSGL 962
Cdd:COG3209 200 LLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTG 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 963 RPASSAGDAHTATFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQVTAATRLEDLLPGISTQDQVS 1042
Cdd:COG3209 280 TGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGG 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1043 TRTYDALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAGTPQARTTGMRYDAQGRLVGELSAQGAAQLASARAAGQGDAQ 1122
Cdd:COG3209 360 YGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGG 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1123 LEAIWQQYGLSHTYDAAGRRTSTTDQNGLKTQFFYDAASRLTHTVNALGEVTETRYDAFGQVQASIRHANRLDLFALANA 1202
Cdd:COG3209 440 GGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGL 519
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1203 SGTPGGVTNAGVLAALDKARNDTADRTTGYRYNATGTLAQVTDALGFARNYVYNTFGEEVRRTGSGQTVATAYDHRGLAV 1282
Cdd:COG3209 520 VVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTT 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1283 QTVQDPDGLKAATSVTYDAFGRVTASTDALGATRTQAYDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYAY 1362
Cdd:COG3209 600 TSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATG 679
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1363 NPDERSLTVITPEGIRVTTVHDRLGQTVAVTDGSGATTRYEYDADGHQTAVQTPLARTTGLYDVAGRLIQATDANGVMTL 1442
Cdd:COG3209 680 GTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALT 759
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1443 LGYDAAGRVLTRTVD--PLGLNLVTRYTYDALGNQLSVTDAQGVVTQFGYDPKGQL---IRQAVDPTGLNLVTTFAYDSA 1517
Cdd:COG3209 760 YTYDALGRLTSETTPggVTQGTYTTRYTYDALGRLTSVTYPDGETVTYTYDALGRLtsvITVGSGGGTDLQDRTYTYDAA 839
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1518 GRQVSVTD---PNGTVTRYEYDTLGrRVLEVVDPSTAThaglnlakRYTYDALGHVTSATDAQghTTRYAYDAEGRQRFV 1594
Cdd:COG3209 840 GNITSITDalrAGTLTQTYTYDALG-RLTSATDPGTTE--------SYTYDANGNLTSRTDGG--TTTYTYDALGRLVSV 908
|
890
....*....|....*.
gi 2023408248 1595 LDAAGNLAETAYDAAG 1610
Cdd:COG3209 909 TKPDGTTTTYTYDALG 924
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
732-1680 |
7.45e-17 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 87.12 E-value: 7.45e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 732 ASGIVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGSAQLGFVLTLTPPQGSTAVVLSATPNRTAQG 811
Cdd:COG3209 1 ETSLGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 812 LGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSADRFRAVYLGDDTHSGSTSGTLNGQPLSGEVLS 891
Cdd:COG3209 81 TALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 892 PQVRSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQPVAGGAAAGLAAARAGSLSGLRPASSAGDA 971
Cdd:COG3209 161 LAGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 972 HTATFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQVTAATRLEDLLPGISTQDQVSTRTYDALNR 1051
Cdd:COG3209 241 SATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1052 VVLSVNAEGTATRYRYDAMGRLVETVQAAGTPQARTTGMRYDAQGRLVGELSAQGAAQLASARAAGQGDAQLEAIWQQYG 1131
Cdd:COG3209 321 TGTAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSST 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1132 LSHTYDAAGRRTSTTDQ---NGLKTQFFYDAASRLTHTVNALGEVTETRYDAFGQVQASIRHANRLDLFALANASGTPGG 1208
Cdd:COG3209 401 TGVGAGTTTTSTTGGDGgpaTAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1209 VTNAGVLAALDKARNDTADRTTGYRYNATGTLAQVTDALGFARNYVYNTFGEEVRRTGSGQTVATAYDHRGLAVQTVQDP 1288
Cdd:COG3209 481 TGGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTST 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1289 DGLKAATSVTYDAFGRVTASTDALGATRTQAYDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYAYNPDERS 1368
Cdd:COG3209 561 GTGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGST 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1369 LTVITPEGIRVTTVHDRLGQTVAVTDGSGATTRYEYDADGHQTAVQTPLARTTGLYDVAGRLIQATDANGVMTLLGYDAA 1448
Cdd:COG3209 641 TGGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLG 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1449 GRVLTRTVDPLGLNLVTRYTYDALGNQLSVTDAQGVVTQFGYDPKGQLIRQ--AVDPTGLNLVTTFAYDSAGRQVSVTDP 1526
Cdd:COG3209 721 TTTTGGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTSEttPGGVTQGTYTTRYTYDALGRLTSVTYP 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1527 NGTVTRYEYDTLGRrvLEVVDPSTATHAGLNLAKRYTYDALGHVTSATDAQGH---TTRYAYDAEGRQRFVlDAAGNLAE 1603
Cdd:COG3209 801 DGETVTYTYDALGR--LTSVITVGSGGGTDLQDRTYTYDAAGNITSITDALRAgtlTQTYTYDALGRLTSA-TDPGTTES 877
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2023408248 1604 TAYDAAGRVVRQTRyaavvpapeglpvnateaqlnglkrpdsaqDQTEHRIYDADNRVTATVNGAGDVVRFAYDGAG 1680
Cdd:COG3209 878 YTYDANGNLTSRTD------------------------------GGTTTYTYDALGRLVSVTKPDGTTTTYTYDALG 924
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
542-1529 |
9.90e-14 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 77.10 E-value: 9.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 542 ATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVALSS 621
Cdd:COG3209 1 ETSLGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 622 SATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALAQT 701
Cdd:COG3209 81 TALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 702 VTPAGSVVLGLASDASLAQGQDIAITVGGGASGIVTlvDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGS 781
Cdd:COG3209 161 LAGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLA--GSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 782 AQLGFVLTLTPPQGSTAVVLSATPNRTAQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSADR 861
Cdd:COG3209 239 TGSATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 862 FRAVYLGDDTHSGSTSGTLNGQPLSGEVLSPQVRSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQ 941
Cdd:COG3209 319 GTTGTAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGS 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 942 PVAGGAAAGLAAARAGSLSGLRPASSAGDAHTATFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQ 1021
Cdd:COG3209 399 STTGVGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTE 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1022 VTAATRLEDLLPGISTQDQVSTRTYDALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAGTPQARTTGMRYDAQGRLVGE 1101
Cdd:COG3209 479 AGTGGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGT 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1102 LSAQGAAQLASARAAGQGDAQLEAIWQQYGLSHTYDAAGRRTSTTDQNGLKTQFFYDAASRLTHTVNALGEVTETRYDAF 1181
Cdd:COG3209 559 STGTGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTG 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1182 GQVQASIRHANRLDLFALANASGTPGGVTNAGVLAALDKARNDTADRTTGYRYNATGTLAQVTDALGFARNYVYNTFGEE 1261
Cdd:COG3209 639 STTGGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTR 718
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1262 VRRTGSGQTVATAYDHRGLAVQTVQDPDGLKAAT------SVTYDAFGRVTASTDALGATrtqaydrlgrtivltdAMGR 1335
Cdd:COG3209 719 LGTTTTGGGGGTTTDGTGTGGTTGTLTTTSTTTTttagalTYTYDALGRLTSETTPGGVT----------------QGTY 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1336 RSTSSYDAFGRTVTQTDALGHTTTYAYNPDERSLTVITPEGIRVTTVHDRlgqtvavtdgsgattRYEYDADGHQTAVQT 1415
Cdd:COG3209 783 TTRYTYDALGRLTSVTYPDGETVTYTYDALGRLTSVITVGSGGGTDLQDR---------------TYTYDAAGNITSITD 847
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1416 PLARTTGL----YDVAGRLIQATDANGVMTlLGYDAAGRVLTRTVDPlglnlVTRYTYDALGNQLSVTDAQGVVTQFGYD 1491
Cdd:COG3209 848 ALRAGTLTqtytYDALGRLTSATDPGTTES-YTYDANGNLTSRTDGG-----TTTYTYDALGRLVSVTKPDGTTTTYTYD 921
|
970 980 990 1000
....*....|....*....|....*....|....*....|...
gi 2023408248 1492 PKGQL-----IRQAVDPTGlNLVTTFAYDSAGRQVSVTDPNGT 1529
Cdd:COG3209 922 ALGHTdhlgsVRALTDASG-QVVWRYDYDPFGNLLAETSGAAA 963
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
255-1182 |
3.07e-13 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 75.56 E-value: 3.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 255 GQEVALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVGAQAWRAVYSGDAQSAPSTSASVGGTVAVSSSGV 334
Cdd:COG3209 21 TNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAGGGYVGGAAAG 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 335 SLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVS 414
Cdd:COG3209 101 GGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGASAYGLTLGGAAAGP 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 415 DALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYAGDLLVGVATVQPNGVATLVSSALPVGSRTIT 494
Cdd:COG3209 181 ATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAAVATAATTLG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 495 AAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADG 574
Cdd:COG3209 261 GTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAADAGTTTTTGT 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 575 VARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVALSSSATSVGTDAPVTLSARVTGRQPGGTVTFLRGDT 654
Cdd:COG3209 341 GTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTSTTGGDGGPA 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 655 VLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALAQTVTPAGSVVLGLASDASLAQGQDIAITvgGGASG 734
Cdd:COG3209 421 TAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTLTSGSAGA--TTLGT 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 735 IVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGSAQLGFVLTLTPPQGSTAVVLSATPNRTAQGLGT 814
Cdd:COG3209 499 DTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTTTGDGTGGA 578
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 815 LLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSADRFRAVYLGDDTHSGSTSGTLNGQPLSGEVLSPQV 894
Cdd:COG3209 579 STTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVTTTGTTTTR 658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 895 RSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQPVAGGAAAGLAAARAGSLSGLRPASSAGDAHTA 974
Cdd:COG3209 659 ATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGGGTTTDGTGTG 738
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 975 TFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTaaqvtaatrledllpgistqdqVSTRTYDALNRVVL 1054
Cdd:COG3209 739 GTTGTLTTTSTTTTTTAGALTYTYDALGRLTSETTPGGVTQGTY----------------------TTRYTYDALGRLTS 796
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1055 SVNAEGTATRYRYDAMGRLVETVQAAGTPQARTTGMR--YDAQGRLVGELSAQGAAQLASARAAGQGDAQLEAIWQQYGL 1132
Cdd:COG3209 797 VTYPDGETVTYTYDALGRLTSVITVGSGGGTDLQDRTytYDAAGNITSITDALRAGTLTQTYTYDALGRLTSATDPGTTE 876
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1133 SHTYDAAGRRTSTTDQNGlkTQFFYDAASRLTHTVNALGEVTETRYDAFG 1182
Cdd:COG3209 877 SYTYDANGNLTSRTDGGT--TTYTYDALGRLVSVTKPDGTTTTYTYDALG 924
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
375-1353 |
1.62e-11 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 69.79 E-value: 1.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 375 AGGVATVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSS 454
Cdd:COG3209 1 ETSLGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 455 TVGTVAFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAA 534
Cdd:COG3209 81 TALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 535 GTPLVLDATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAA 614
Cdd:COG3209 161 LAGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 615 TSVALSSSATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASA 694
Cdd:COG3209 241 SATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 695 SPALAQTVTPAGSVVLGLASDASLAQGQDIAITVGGGASGIVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYA 774
Cdd:COG3209 321 TGTAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSST 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 775 ADVGFGSAQLGFVLTLTPPQGSTAVVLSATPNRTAQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDM 854
Cdd:COG3209 401 TGVGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 855 PQSSADRFRAVYLGDDTHSGSTSGTLNGQPLSGEVLSPQVRSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVI 934
Cdd:COG3209 481 TGGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTST 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 935 GSVRYAQPVAGGAAAGLAAARAGSLSGLRPASSAGDAHTATFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAV 1014
Cdd:COG3209 561 GTGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGST 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1015 GSTTAAQVTAATRLEDLLPGISTQDQVSTRTYDALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAGTPQARTTGMRYDA 1094
Cdd:COG3209 641 TGGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLG 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1095 QGRLVGELSAQGAAQLASARAAGQGDAQLEAIWQQYGLSHTYDAAGRRTSTTD-----QNGLKTQFFYDAASRLTHTVNA 1169
Cdd:COG3209 721 TTTTGGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTSETTpggvtQGTYTTRYTYDALGRLTSVTYP 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1170 LGEVTETRYDAFGQVQASIRHANrldlfalanasgtpggvtnagvlaaldkaRNDTADRTTGYRYNATGTLAQVTDALG- 1248
Cdd:COG3209 801 DGETVTYTYDALGRLTSVITVGS-----------------------------GGGTDLQDRTYTYDAAGNITSITDALRa 851
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1249 --FARNYVYNTFGEEVRRTGSGQTVATAYDHRGLAVQtvqdpDGLKAATSVTYDAFGRVTASTDALGATRTQAY------ 1320
Cdd:COG3209 852 gtLTQTYTYDALGRLTSATDPGTTESYTYDANGNLTS-----RTDGGTTTYTYDALGRLVSVTKPDGTTTTYTYdalght 926
|
970 980 990
....*....|....*....|....*....|....
gi 2023408248 1321 DRLGRTIVLTDAMGR-RSTSSYDAFGRTVTQTDA 1353
Cdd:COG3209 927 DHLGSVRALTDASGQvVWRYDYDPFGNLLAETSG 960
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
65-887 |
2.30e-11 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 69.41 E-value: 2.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 65 AADNTASSIDWAIHVTGGTGS-AVELYHRGVLVANVGAVAAGDVLGLSYAGGVLSYSKNGVVLRQDAVQIDQPLYLDSSF 143
Cdd:COG3210 800 ADGTITAAGTTAINVTGSGGTiTINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITV 879
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 144 YAPGSSVSGLEFRDGTGTLTALSAKPVATGRVTFYGGGAVLGTATLVDGVASLTTQALINAGTASITAAYEGDGTNAAST 223
Cdd:COG3210 880 GSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASA 959
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 224 SAAMALAVGGGAGNRPATTTSLSASSTSTSRGQEVALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVGAQ 303
Cdd:COG3210 960 SDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAAT 1039
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 304 AWRAVYSG----DAQSAPSTSASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVA 379
Cdd:COG3210 1040 AGGQNGVGvnasGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTAS 1119
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 380 TVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTV 459
Cdd:COG3210 1120 KVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLK 1199
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 460 AFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLV 539
Cdd:COG3210 1200 GGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGA 1279
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 540 LDATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVAL 619
Cdd:COG3210 1280 TATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGAT 1359
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 620 SSSATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALA 699
Cdd:COG3210 1360 DSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGN 1439
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 700 QTVTPAGSVVLGLASDASLAQGQDIAITVGGGASGIVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGF 779
Cdd:COG3210 1440 TTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEV 1519
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 780 GSAQLGFVLTLTPPQGSTAVVLSATPNRTAQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSA 859
Cdd:COG3210 1520 AKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTL 1599
|
810 820
....*....|....*....|....*...
gi 2023408248 860 DRFRAVYLGDDTHSGSTSGTLNGQPLSG 887
Cdd:COG3210 1600 SLAEGTNAEYGGTTNVTSGTAGNAGATG 1627
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
58-1725 |
6.18e-11 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 67.87 E-value: 6.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 58 VGLTTDPAADNTASSIDWAIHVTGGTGSAVELYHRGVLVANVGAVAAGDVLGLSYAGGVLSYSKNGVVLRQDAVQIDQPL 137
Cdd:COG3210 8 TTGNKTIGVDIAVTTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGGIGAAAAN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 138 YLDSSFYAPGSSVSGLEFRDGTGTLTALSAKPVATGRVTFYGGGAVLGTATLVDGVASLTTQALINAGTASITAAYEGDG 217
Cdd:COG3210 88 TAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 218 TNAASTSAAMALAVGGGAGNRPATTTSLSASSTSTSRGQEVALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRD 297
Cdd:COG3210 168 SSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTD 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 298 LAVGAQAWRAVYSGDAQSAPSTSASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVA--GLRPGGTVTFYNNGAPIA 375
Cdd:COG3210 248 ISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGgtGVLGGGTAAGITTTNTVG 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 376 GGVATVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSST 455
Cdd:COG3210 328 GNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLAT 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 456 VGTVAFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAG 535
Cdd:COG3210 408 GNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAG 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 536 TPLVLDATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAAT 615
Cdd:COG3210 488 GGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTL 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 616 SVALSSSATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASAS 695
Cdd:COG3210 568 GVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTG 647
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 696 PALAQTVTPAGSVVLGLASDASLAQGQDIAITVGGGASGIVTLVDGNNVVSIARV-VNGVATVSTRSLAAGRHQLTANYA 774
Cdd:COG3210 648 SGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAgNTLTISTGSITVTGQIGALANANG 727
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 775 ADVGFGSAQLGFVLTL----TPPQGSTAVVLSATPNRTAQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAV- 849
Cdd:COG3210 728 DTVTFGNLGTGATLTLnagvTITSGNAGTLSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAa 807
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 850 -------------LNVDMPQSSADRFRAVYLGDDTHSGSTSGTLNGQPLSGEVLSPQVRSTQDRTASQIHGRDGLLLGTV 916
Cdd:COG3210 808 gttainvtgsggtITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATS 887
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 917 DGEGYLTEYRYDAAGRVIGSVRYAQPVAGGAAAGLAAARAGSLSGLRPASSAGDAHTATFYDAQGRRVGELDAEGYLTQS 996
Cdd:COG3210 888 TGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTG 967
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 997 SYDANGNLATVRRYATAVGSTTAAQVTAATRLEDLLPGISTQDQVSTRTYDALNRVVLSVNAEGTATRYRYDAMGRLVET 1076
Cdd:COG3210 968 ASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVG 1047
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1077 VQAAGTPQARTTGMRYDAQGRLVGELSAQGAAQLASARAAGQGDAQLEAIwQQYGLSHTYDAAGRRTSTTDQNGLKTQFF 1156
Cdd:COG3210 1048 VNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGI-TNGGATGTSGGTTTSTGGVTASKVGGTTT 1126
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1157 YDAASRLTHTVNALGEVTETRYDAFGQVQASIRHANRLDLFALANASGTPGGVTNAGVLAALDKARNDTADRTTGYRYNA 1236
Cdd:COG3210 1127 VGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGG 1206
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1237 TGTLAQVTDALGFARNYVYNTFGEEVRRTGSGQTVATAYDHRGLAVQTVQDPDGLKAATSVTYDAFGRVTASTDALGATR 1316
Cdd:COG3210 1207 STTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTV 1286
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1317 TQAYDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYAYNPDERSLTVITPEGIRVTTVHDRLGQTVAVTDGS 1396
Cdd:COG3210 1287 DIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAG 1366
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1397 GATTRYEYDADGHQTAVQTPLARTTGLYDVAGRLIQATDANGVMTLLGYDAAGRVLTRTVDPLGLNLVTRYTYDALGNQL 1476
Cdd:COG3210 1367 SGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVA 1446
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1477 SVTDAQGVVTQFGYDPKGQLIRQAVDPTGLNLVTTFAYDSAGRQVSVTDPNGTVTRYEYDTLGRRVLEVVDPSTATHAGL 1556
Cdd:COG3210 1447 GAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEG 1526
|
1530 1540 1550 1560 1570 1580 1590 1600
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1557 NLAKRYTYDALGHVTSATDAQGHTTRYAYDAEGRQRFVLDAAGNLAETAYDAAGRVVRQTRYAAVVPAPEGLPVNATEAQ 1636
Cdd:COG3210 1527 GEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTN 1606
|
1610 1620 1630 1640 1650 1660 1670 1680
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1637 LNGLKRPDSAQDQTEHRIYDADNRVTATVNGAGDVVRFAYDGAGRVIQRTAYAQRLAMASWAVGTDPQPGTDAANSADMV 1716
Cdd:COG3210 1607 AEYGGTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLGGATTA 1686
|
....*....
gi 2023408248 1717 TRTVYDAAG 1725
Cdd:COG3210 1687 AAGNVATGD 1695
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
489-1415 |
1.18e-10 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 67.09 E-value: 1.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 489 GSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGGRNAGIAGSVRFYAGSTLVGT 568
Cdd:COG3209 12 GASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAGG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 569 VQAADGVARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVALSSSATSVGTDAPVTLSARVTGRQPGGTVT 648
Cdd:COG3209 92 GYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGASAYGL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 649 FLRGDTVLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALAQTVTPAGSVVLGLASDASLAQGQDIAITV 728
Cdd:COG3209 172 TLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 729 GGGASGIVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGSAQLGFVLTLTPPQGSTAVVLSATPNRT 808
Cdd:COG3209 252 VATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAAD 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 809 AQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSADRFRAVYLGDDTHSGSTSGTLNGQPLSGE 888
Cdd:COG3209 332 AGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTS 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 889 VLSPQVRSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQPVAGGAAAGLAAARAGS--LSGLRPAS 966
Cdd:COG3209 412 TTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTggGTLTSGSA 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 967 SAGDAHTATFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQVTAATRLEDLLPGISTQDQVSTRTY 1046
Cdd:COG3209 492 GATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTTT 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1047 DALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAGTPQARTTGMRYDAQGRLVGELSAQGAAQLASARAAGQGDAQLEAI 1126
Cdd:COG3209 572 GDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVTT 651
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1127 WQQYGLSHTYDAAGRRTSTTDQNGLKTQFFYDAASRLTHTVNALGEVTETRYDAFGQVQASIRHANRLDLFALANASGTP 1206
Cdd:COG3209 652 TGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGGGTT 731
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1207 GGVTNAGVLAALDKARNDTADRTTG---YRYNATGTLAQVTDALGFARN-----YVYNTFGEEVRRTG-SGQTVATAYDH 1277
Cdd:COG3209 732 TDGTGTGGTTGTLTTTSTTTTTTAGaltYTYDALGRLTSETTPGGVTQGtyttrYTYDALGRLTSVTYpDGETVTYTYDA 811
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1278 RGLAVQTVQ---DPDGLKAATSVTYDAFGRVTASTDALGATRTQ---AYDRLGRtIVLTDAMGRRSTSSYDAFGRTVTQT 1351
Cdd:COG3209 812 LGRLTSVITvgsGGGTDLQDRTYTYDAAGNITSITDALRAGTLTqtyTYDALGR-LTSATDPGTTESYTYDANGNLTSRT 890
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2023408248 1352 DalGHTTTYAYNPDERSLTVITPEGIRVT------TVHDRLGQTVAVTDGSGATT-RYEYDADGHQTAVQT 1415
Cdd:COG3209 891 D--GGTTTYTYDALGRLVSVTKPDGTTTTytydalGHTDHLGSVRALTDASGQVVwRYDYDPFGNLLAETS 959
|
|
| Big_3_5 |
pfam16640 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
623-705 |
1.39e-10 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold.
Pssm-ID: 406933 [Multi-domain] Cd Length: 90 Bit Score: 59.57 E-value: 1.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 623 ATSVGTDAPVTLSARVT---GRQPGGTVTFLRGDTVLGTAQ--VFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPA 697
Cdd:pfam16640 1 PTSVTYGQSVTLTATVTpasGGTPTGTVTFTDGGTVLGTAVlvSGNGVATLTTTALAAGTHTITATYSGDANYAASTSSA 80
|
....*...
gi 2023408248 698 LAQTVTPA 705
Cdd:pfam16640 81 VTVTVTKA 88
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
310-1184 |
1.97e-09 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 62.85 E-value: 1.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 310 SGDAQSAPSTSASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVVDGVASLS 389
Cdd:COG3209 12 GASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAGG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 390 VTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYAGDLLVG 469
Cdd:COG3209 92 GYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGASAYGL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 470 VATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGGR 549
Cdd:COG3209 172 TLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 550 NAGIAGSVRFYAGSTLVGTVQAADGVARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVALSSSATSVGTD 629
Cdd:COG3209 252 VATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAAD 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 630 APVTLSARVTGRQPGGTVTFLRGDTVLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALAQTVTPAGSVV 709
Cdd:COG3209 332 AGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTS 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 710 LGLASDASLAQGQDIAITVGGGASGIVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGsaqlgfvLT 789
Cdd:COG3209 412 TTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTG-------GG 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 790 LTPPQGSTAVVLSATPNRTAQGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDMPQSSADRFRAVYLGD 869
Cdd:COG3209 485 TLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGG 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 870 DTHSGSTSGTLNGQPLSGEVLSPQVRSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQPVAGGAAA 949
Cdd:COG3209 565 TGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGT 644
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 950 GLAAARAGSLSGLRPASSAGDAHTATFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQVTAATRLE 1029
Cdd:COG3209 645 TGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTT 724
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1030 DLLPGISTQDQVSTRTYDALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAGTPQ-ARTTGMRYDAQGRLVGELSAQGAA 1108
Cdd:COG3209 725 GGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTSETTPGGVTQgTYTTRYTYDALGRLTSVTYPDGET 804
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1109 QLASARAAGQGDAQLE----AIWQQYGLSHTYDAAGRRTSTTD---QNGLKTQFFYDAASRLThTVNALGEVTETRYDAF 1181
Cdd:COG3209 805 VTYTYDALGRLTSVITvgsgGGTDLQDRTYTYDAAGNITSITDalrAGTLTQTYTYDALGRLT-SATDPGTTESYTYDAN 883
|
...
gi 2023408248 1182 GQV 1184
Cdd:COG3209 884 GNL 886
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
170-1099 |
5.17e-09 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 61.70 E-value: 5.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 170 VATGRVTFYGGGAVLGTATLVDGVASLTTQALINAGTASITAAYEGDGTNAASTSAAMALAVGGGAGNRPATTTSLSASS 249
Cdd:COG3209 7 VGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 250 TSTSRGQEVALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVGAQAWRAVYSGDAQSAPSTSASVGGTVAV 329
Cdd:COG3209 87 SAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 330 SSSGVSLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVVDGVASLSVTLPSGSAGVTARYSGDASN 409
Cdd:COG3209 167 SAYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 410 AAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYAGDLLVGVATVQPNGVATLVSSALPVG 489
Cdd:COG3209 247 GAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAV 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 490 SRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGGRNAGIAGSVRFYAGSTLVGTV 569
Cdd:COG3209 327 SGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAG 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 570 QAADGVARLTLADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVALSSSATSVGTDAPVTLSARVTGRQPGGTVTF 649
Cdd:COG3209 407 TTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTL 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 650 LRGDTVLGTAQVFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALAQTVTPAGSVVLGLASDASLAQGQDIAITVG 729
Cdd:COG3209 487 TSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTG 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 730 GGASGIVTLVDGNNVVSIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGSAQLGFVLTLTPPQGSTAVVLSATPNRTA 809
Cdd:COG3209 567 TVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTG 646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 810 QGLGTLLSAQVSGDQPTGRVAFYNGDQVLGTVDLVYGLAVLNVDmpQSSADRFRAVYLGDDTHSGSTSGTLNGQPLSGEV 889
Cdd:COG3209 647 TGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTT--STATTGATTGGTETGTTVTTLAGGTTTRLGTTTT 724
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 890 LSPQVRSTQDRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQPVaggaaaglaaaragslsglrpassAG 969
Cdd:COG3209 725 GGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTSETTPGGVT------------------------QG 780
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 970 DAHTATFYDAQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQV---TAATRLEDLLPGISTQDQVSTRTY 1046
Cdd:COG3209 781 TYTTRYTYDALGRLTSVTYPDGETVTYTYDALGRLTSVITVGSGGGTDLQDRTytyDAAGNITSITDALRAGTLTQTYTY 860
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|...
gi 2023408248 1047 DALNRVVlSVNAEGTATRYRYDAMGRLVEtvqaagTPQARTTGMRYDAQGRLV 1099
Cdd:COG3209 861 DALGRLT-SATDPGTTESYTYDANGNLTS------RTDGGTTTYTYDALGRLV 906
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
899-1823 |
6.72e-09 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 61.31 E-value: 6.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 899 DRTASQIHGRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYAQPVAGGAAAGLAAARAGSLSGLRPASSAGDAHTATFYD 978
Cdd:COG3209 8 GGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDAS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 979 AQGRRVGELDAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQVTAATRLEDLLPGISTQDQVSTRTYDALNRVVLSVNA 1058
Cdd:COG3209 88 AAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGAS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1059 EGTATRYRYDAMGRLVETVQAAGTPQARTTGMRYDAQGRLVGELSAQGAAQLASARAAGQGDAQLEAIWQQYGLSHTYDA 1138
Cdd:COG3209 168 AYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAG 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1139 AGRRTSTTDQNGLKTQFFYDAASRLTHTVNALGEVTETRYDAFGQVQASIRHANRLDlfALANASGTPGGVTNAGVLAAL 1218
Cdd:COG3209 248 AGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGG--AGGGGTAGGTTTAAGTTGTAA 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1219 DKARNDTADRTTGYRYNATGTLAQVTDALGFARNYVYNTFGEEVRRTGSGQTVATAYDHRGLAVQTVQDPDGLKAATSVT 1298
Cdd:COG3209 326 VSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGA 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1299 YDAFGRVTASTDALGATRTQAYDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYAYNPDERSLTVITPEGIR 1378
Cdd:COG3209 406 GTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGT 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1379 VTTVHDRLGQTVAVTDGSGATTRYEYDADGHQTAVQTPLARTTGLYDVAGRLIQATDANGVMTLLGYDAAGRVLTRTVDP 1458
Cdd:COG3209 486 LTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGT 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1459 LGLNLVTRYTYDALGNQLSVTDAQGVVTQFGYDPKGQLIRQAVDPTGLNLVTTFAYDSAGRQVSVTDPNGTVTRYEYDTL 1538
Cdd:COG3209 566 GTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTT 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1539 GRRVLEVVDPSTATHAGLNLAKRYTYDALGHVTSATDAQGHTTRYAYDAEGRQRFVLDAAGNLAETAYDAAGRVVRQTRY 1618
Cdd:COG3209 646 GTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTG 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1619 AAvvpapeglpvnateaqlnglkRPDSAQDQTEHRIYDADNRVTATVNGAGDVVRFAYDGAGRVIQRTayaqrlamaswa 1698
Cdd:COG3209 726 GG---------------------GGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTSET------------ 772
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1699 vgtdpqpGTDAANSADMVTRTVYDAAGRVRYSIDGTGAVVSQRYDGNGNVTQRIRYARRLDLASQPLSANPSESEmelRL 1778
Cdd:COG3209 773 -------TPGGVTQGTYTTRYTYDALGRLTSVTYPDGETVTYTYDALGRLTSVITVGSGGGTDLQDRTYTYDAAG---NI 842
|
890 900 910 920
....*....|....*....|....*....|....*....|....*..
gi 2023408248 1779 VYIFDAQRD--EHTRMRYDAAGRLTlSADGAGGVSQYLYDKAGHLLQ 1823
Cdd:COG3209 843 TSITDALRAgtLTQTYTYDALGRLT-SATDPGTTESYTYDANGNLTS 888
|
|
| Big_3_5 |
pfam16640 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
434-523 |
1.08e-08 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold.
Pssm-ID: 406933 [Multi-domain] Cd Length: 90 Bit Score: 54.17 E-value: 1.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 434 PSSAVYGSPVTLSATAPYSSSTV--GTVAFYAGDLLVGVAT-VQPNGVATLVSSALPVGSRTITAAFSGNAGTEPpsrST 510
Cdd:pfam16640 1 PTSVTYGQSVTLTATVTPASGGTptGTVTFTDGGTVLGTAVlVSGNGVATLTTTALAAGTHTITATYSGDANYAA---ST 77
|
90
....*....|...
gi 2023408248 511 AAPLTITGTATQT 523
Cdd:pfam16640 78 SSAVTVTVTKAAT 90
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
896-1492 |
1.73e-08 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 60.02 E-value: 1.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 896 STQDRTASQIH---GRDGLLLGTVDGEGYLTEYRYDAAGRVIGSVRYaqpvaggaaaglaaaragslSGLRPASSagdah 972
Cdd:NF041261 528 TTTDATGSTKQmtwSRYGQLLAFTDCSGYQTRYEYDRFGQMTAVHRE--------------------EGISTYRR----- 582
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 973 tatfYDAQGRRVGELDAEGYLTQSSYDANGNLATV-----RRYAT---AVGSTTAAQVTAATR-LEDLLPG-----ISTQ 1038
Cdd:NF041261 583 ----YDNRGQLTSVKDAQGRETRYEYNAAGDLTAVitpdgNRSETqydAWGKAVSTTQGGLTRsMEYDAAGrittlTNEN 658
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1039 DQVSTRTYDALNRVVLSVNAEGTATRYRYDAMGRLVETvqaagTPQARTTGMRYDAQGRLV-----GELSAQGAAQLASA 1113
Cdd:NF041261 659 GSHSTFLYDALDRLVQQRGFDGRTQRYHYDLTGKLTQS-----EDEGLVTLWHYDESDRIThrtvnGEPAEQWQYDEHGW 733
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1114 RAAGQGDAQLEAIWQQYGlshtYDAAGRRTS--TTDQNGLKTQFFYDAASRltHTVNALGEVTETRYDAFGQVQasirha 1191
Cdd:NF041261 734 LTDISHLSEGHRVAVHYG----YDDKGRLTGerQTVENPETGELLWQHETG--HAYNEQGLANRVTPDSLPPVE------ 801
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1192 nrldlfALANASGTPGGVTNAG---VLAALDKARNDT------ADRTTGYRYNATGTLA-----QVTDALGFARNYVYNT 1257
Cdd:NF041261 802 ------WLTYGSGYLAGMKLGGtplVEYTRDRLHRETvrsfggAGSNAAYELTTAYTPAgqlqsQHLNSLVYDRDYTWND 875
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1258 FGEEVRRTGSGQTvataydhrglavqtvqdpdglkaaTSVTYDAFGRVTastdalgATRTQAYDRLGRTIVLTDAMGRR- 1336
Cdd:NF041261 876 NGDLVRISGPRQT------------------------REYGYSATGRLT-------GVHTTAANLDIRIPYATDPAGNRl 924
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1337 -STSSYDAFGRTVTQTDALGHTTTYAYNPDERSltvitpegiRVTTVHDRLGQTVAVTDGSgATTRYEYDADG---HQTA 1412
Cdd:NF041261 925 pDPELHPDSTLTAWPDNRIAEDAHYVYRYDEYG---------RLTEKTDRIPEGVIRTDDE-RTHHYHYDSQHrlvFYTR 994
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1413 VQ--TPLARTTGLYDVAGRLIqatdangvmtllgydaAGRVLTRTVDPLG-LNL-----VTRYTYDalGNQLSVTDAQGV 1484
Cdd:NF041261 995 IQhgEPLVESRYLYDPLGRRM----------------AKRVWRRERDLTGwMSLsrkpeVTWYGWD--GDRLTTVQTDTT 1056
|
....*...
gi 2023408248 1485 VTQFGYDP 1492
Cdd:NF041261 1057 RIQTVYQP 1064
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
832-1746 |
2.05e-08 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 59.38 E-value: 2.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 832 YNGDQVLGTVDLVYGLAVLNVDMPQSSADRFRAVYLGDDTHSGSTSGTLNGQPLSGEVLSPQVRSTQDRTASQIHGRDGL 911
Cdd:COG3209 12 GASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAGG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 912 LLGTVDGEGYLTEYRYDAAGRVIGSVRYAQPVAGGAAAGLAAARAGSLSGLRPASSAGDAHTATFYDAQGRRVGELDAEG 991
Cdd:COG3209 92 GYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGASAYGL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 992 YLTQSSYDANGNLATVRRYATAVGSTTAAQVTAATRLEDLLPGISTQDQVSTRTYDALNRVVLSVNAEGTATRYRYDAMG 1071
Cdd:COG3209 172 TLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1072 RLVETVQAAGTPQARTTGMRYDAQGRLVGELSAQGAAQLASARAAGQGDAQLEAIWQQYGLSHTYDAAGRRTSTTDQNGL 1151
Cdd:COG3209 252 VATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAAD 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1152 KTQFFYDAASRLTHTVNALGEVTETRYDAFGQVQASIRHANRLDLFALANASGTPGGVTNAGVLAALDKARNDTADRTTG 1231
Cdd:COG3209 332 AGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTS 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1232 YRYNATGTLAQVTDALGFARNYVYNTFGEEVRRTGSGQTVATAYDHRGLAVQTVQDPDGLKAATSVTYDAFGRVTASTDA 1311
Cdd:COG3209 412 TTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTLTSGSA 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1312 LGATRTQAYDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYAYNPDERSLTVITPEGIRVTTVHDRLGQTVA 1391
Cdd:COG3209 492 GATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTTT 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1392 VTDGSGATTRYEYDADGHQTAVQTPLARTTGLYDVAGRLIQATDANGVMTLLGYDAAGRVLTRTVDPLGLNLVTRYTYDA 1471
Cdd:COG3209 572 GDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVTT 651
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1472 LGNQLSVTDAQGVVTQFGYDPKGQLIRQAVDPTGlnlVTTFAYDSAGRQVSVTDPNGTVTRYEYDTLGRRVLEVVDPSTA 1551
Cdd:COG3209 652 TGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGG---GTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGG 728
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1552 THAGLNLAKRYTYDALGHVTSATDAQGHTTRYAYDAEGRQRFVLDAAGNLAET-----AYDAAGRVVRQTRYAAVVPAPE 1626
Cdd:COG3209 729 GTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTSETTPGGVTQGTyttryTYDALGRLTSVTYPDGETVTYT 808
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1627 GLPVNATEAQLNGLKRPDSAQDQTEHRIYDADN--RVTATVNGAGDVVRFAYDGAGRVIQRTAYAQRLAMASWAVgtdpq 1704
Cdd:COG3209 809 YDALGRLTSVITVGSGGGTDLQDRTYTYDAAGNitSITDALRAGTLTQTYTYDALGRLTSATDPGTTESYTYDAN----- 883
|
890 900 910 920
....*....|....*....|....*....|....*....|..
gi 2023408248 1705 pGTDAANSADMVTRTVYDAAGRVRYSIDGTGAVVSQRYDGNG 1746
Cdd:COG3209 884 -GNLTSRTDGGTTTYTYDALGRLVSVTKPDGTTTTYTYDALG 924
|
|
| Big_3_5 |
pfam16640 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
159-235 |
7.03e-08 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold.
Pssm-ID: 406933 [Multi-domain] Cd Length: 90 Bit Score: 51.86 E-value: 7.03e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2023408248 159 TGTLTAlSAKPVATGRVTFYGGGAVLGTATLV--DGVASLTTQALiNAGTASITAAYEGDGTNAASTSAAMALAVGGGA 235
Cdd:pfam16640 13 TATVTP-ASGGTPTGTVTFTDGGTVLGTAVLVsgNGVATLTTTAL-AAGTHTITATYSGDANYAASTSSAVTVTVTKAA 89
|
|
| Big_3_5 |
pfam16640 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
326-419 |
2.84e-07 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold.
Pssm-ID: 406933 [Multi-domain] Cd Length: 90 Bit Score: 49.94 E-value: 2.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 326 TVAVSSSGVSLAATVTSRSTGEATvllaarvaglrpgGTVTFYNNGAPIAGGVATVVDGVASLSVT-LPSGSAGVTARYS 404
Cdd:pfam16640 2 TSVTYGQSVTLTATVTPASGGTPT-------------GTVTFTDGGTVLGTAVLVSGNGVATLTTTaLAAGTHTITATYS 68
|
90
....*....|....*
gi 2023408248 405 GDASNAAAVSDALVL 419
Cdd:pfam16640 69 GDANYAASTSSAVTV 83
|
|
| Big_3_5 |
pfam16640 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
255-332 |
1.41e-06 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold.
Pssm-ID: 406933 [Multi-domain] Cd Length: 90 Bit Score: 48.01 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 255 GQEVALTATVS----GNASGFVTFFNGNQVLG--VAALANGVAVWKSRDLAVGAQAWRAVYSGDAQSAPSTSASVGGTVA 328
Cdd:pfam16640 7 GQSVTLTATVTpasgGTPTGTVTFTDGGTVLGtaVLVSGNGVATLTTTALAAGTHTITATYSGDANYAASTSSAVTVTVT 86
|
....
gi 2023408248 329 VSSS 332
Cdd:pfam16640 87 KAAT 90
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
147-574 |
1.89e-06 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 53.03 E-value: 1.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 147 GSSVSGLEFRDGTGTLTALSAKPVATGRVTFYGGGAVLGTATLVDGVAS-LTTQALINAGTASITAAYEGDGTNAASTSA 225
Cdd:COG3468 16 GTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGgGGGGAGSGGGLAGAGSGGTGGNSTGGGGGN 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 226 AMALAVGGGAGNRPATTTSLSASSTSTSRGQEVALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVGAQAW 305
Cdd:COG3468 96 SGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGGGAG 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 306 RAVYSGDAQSAPSTSASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVV--D 383
Cdd:COG3468 176 GGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGltG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 384 GVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYA 463
Cdd:COG3468 256 GGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGG 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 464 GDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDAT 543
Cdd:COG3468 336 GGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGG 415
|
410 420 430
....*....|....*....|....*....|.
gi 2023408248 544 VTSGGRNAGIAGSVRFYAGSTLVGTVQAADG 574
Cdd:COG3468 416 LTLTGGTLTVNGNYTGNNGTLVLNTVLGDDN 446
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
62-503 |
4.29e-06 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 51.87 E-value: 4.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 62 TDPAADNTASSIDWAIHVTGGTGSAVELYHRGVLVANVGAVAAGDVLGLSYAGGVLSYSKNGVVLRQDAVQIDQPLYLDS 141
Cdd:COG3468 1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 142 SFYAPGSSVSGLEFRDGTGTLTALSAKPVATGRVTFYGGGAVLGTATLVDGVASLTTQALINAGTASITAAYEGDGTNAA 221
Cdd:COG3468 81 SGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 222 STSAAMALAVGGGAGNRPATTTSLSASSTSTSRGQEVALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVG 301
Cdd:COG3468 161 TGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 302 AqawrAVYSGDAQSAPSTSASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATV 381
Cdd:COG3468 241 G----GGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 382 VDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAF 461
Cdd:COG3468 317 GGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLT 396
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 2023408248 462 YAGDLLVGVATVQPNGVATLVSSAlpvGSRTITAAFSGNAGT 503
Cdd:COG3468 397 TGGTGNNGGGGVGGGGGGGLTLTG---GTLTVNGNYTGNNGT 435
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1514-1549 |
9.53e-06 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 44.13 E-value: 9.53e-06
10 20 30
....*....|....*....|....*....|....*.
gi 2023408248 1514 YDSAGRQVSVTDPNGTVTRYEYDTLGRRVlEVVDPS 1549
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLT-AVTDPD 35
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
186-828 |
1.93e-05 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 49.43 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 186 TATLVDGVASLTTQALINAGTASITAAYEGDGTNAASTSAAMALAVGGGAGNRPATTTSLSASSTSTSRGQEVALTATVS 265
Cdd:COG4935 1 GAAGGAGSTTGLAAAVLAAAAGTGSAATAEGGAASTATSAAVAGASAAAAAATAVGAGASSLAASAAAAAAAASGAAAGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 266 GNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVGAQAWRAVYSGDAQSAPSTSASVGGTVAVSSSGVSLAATVTSRST 345
Cdd:COG4935 81 VDAAPAAATVVGAALGVVAVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 346 GEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAG 425
Cdd:COG4935 161 AVAGAAGGGGGVGVAAAVGVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 426 AVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEP 505
Cdd:COG4935 241 AAGVGGLGAAATAAAADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 506 PSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLTLADVPP 585
Cdd:COG4935 321 GGGSAAAAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 586 GALTAVYDGFQGFAASTSQATASAVLAAATSVALSSSATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGTAQVFDGV 665
Cdd:COG4935 401 VASAAGAVGAGTAAGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSTT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 666 ARLVVGGLPPGTHELRARyeGDTRNAASASPALAQTVTPAGSVVLGLASDASLAQGQDIAITVGGGASGIVTLVDGNNVV 745
Cdd:COG4935 481 AAAAAAAAGLATTAAVAA--GAAGAAAAAATAASVGGATGAAGTTNSTATFSNTTDVAIPDNGPAGVTSTITVSGGGAVE 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 746 SIARVVNgvatvstrslaagrhqLTANYAADVgfgsaqlgfVLTLTPPQGSTAVVLSATPNRTAQGLGTLLSAQVSGDQP 825
Cdd:COG4935 559 DVTVTVD----------------ITHTYRGDL---------VITLISPDGTTVVLKNRSGGSADNINATFDVANFSGESA 613
|
...
gi 2023408248 826 TGR 828
Cdd:COG4935 614 NGT 616
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1564-1600 |
3.16e-05 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 42.59 E-value: 3.16e-05
10 20 30
....*....|....*....|....*....|....*..
gi 2023408248 1564 YDALGHVTSATDAQGHTTRYAYDAEGRQRFVLDAAGN 1600
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLTAVTDPDGT 37
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
988-1823 |
3.18e-05 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 48.98 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 988 DAEGYLTQSSYDANGNLATVRRYATAVGSTTAAQVTAATRLEDLLPGISTQDQVSTRTYDALNRVVLSVNAEGTATRYRY 1067
Cdd:COG3209 3 SLGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1068 DAMGRLVETVQAAGTPQARTTGMRYDAQGRLVGELSAQGAAQLASARAAGQGDAQLEAIWQQYGLSHTYDAAGRRTSTTD 1147
Cdd:COG3209 83 LGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1148 QNGLKTQFFYDAASRLTHTVNALGEVTETRYDAFGQVQASIRHANRLDLFALANASGTPGGVTNAGVLAALDKARNDTAD 1227
Cdd:COG3209 163 GGGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1228 RTTGYRYNATGTLAQVTDALGFARNYVYNTFGEEVRRTGSGQTVATAYDHRGLAVQTVQDPDGLKAATS-VTYDAFGRVT 1306
Cdd:COG3209 243 TGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAgGTTTAAGTTG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1307 ASTDALGATRTQAYDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYAYNPDERSLTVITPEGIRVTTVHDRL 1386
Cdd:COG3209 323 TAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1387 GQTVAVTDGSGATTRYEYDADGHQTAVQTPLARTTGLYDVAGRLIQATDANGVMTLLGYDAAGRVLTRTVDPLGLNLVTR 1466
Cdd:COG3209 403 VGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTG 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1467 YTYDALGNQLSVTDAQGVVTQFGYDPKGQLIRQAVDPTGLNLVTTFAYDSAGRQVSVTDPNGTVTRYEYDTLGRRVLEVV 1546
Cdd:COG3209 483 GGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGT 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1547 DPSTATHAGLNLAKRYTYDALGHVTSATDAQGHTTRYAYDAEGRQRFVLDAAGNLAETAYDAAGRVVRQTRYAAVVPAPE 1626
Cdd:COG3209 563 GGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTG 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1627 GLPVNATEAQLNGLKRPDSAQDQTEHRIYDADNRVTATVNGAGDVVRFAYDGAGRVIQRTAYAQRLAMASWA----VGTD 1702
Cdd:COG3209 643 GTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGtttrLGTT 722
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1703 PQPGTDAANSADMVTRTVYDAAGRVRYSIDGTGAVVSQRYDGNGNVTQRIRYARrldlasqplsanpsesemelrlvyif 1782
Cdd:COG3209 723 TTGGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTSETTPGG-------------------------- 776
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 2023408248 1783 DAQRDEHTRMRYDAAGRLTLSADGAGGVSQYLYDKAGHLLQ 1823
Cdd:COG3209 777 VTQGTYTTRYTYDALGRLTSVTYPDGETVTYTYDALGRLTS 817
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
2-524 |
3.78e-05 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 48.66 E-value: 3.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 2 NERPSAVASGATLASGTAAKTGTASQWDASVRSTVGYAGGASVRFTVGAQTDQRYMVGLTTDPAADNTASSIDWAIHVTG 81
Cdd:COG4935 19 AAAGTGSAATAEGGAASTATSAAVAGASAAAAAATAVGAGASSLAASAAAAAAAASGAAAGAVDAAPAAATVVGAALGVV 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 82 GTGSAVELYHRGVLVANVGAVAAGDVLGLSYAGGVLSYSKNGVVLRQDAVQIDQPLYLDSSFYAPGSSVSGLEFRDGTGT 161
Cdd:COG4935 99 AVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVAAVAGAAGGGGGVGVAAAV 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 162 LTALSAKPVATGRVTFYGGGAVLGTATLVDGVAS--LTTQALINAGTASITAAYEGDGTNAASTSAAMALAVGGGAGNRP 239
Cdd:COG4935 179 GVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGggLGGAAGGGGAGLAAAGGGGGGAAAAAAAGVGGLGAAATAAAADG 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 240 ATTTSLSASSTSTSRGQEVALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVGAQAWRAVYSGDAQSAPST 319
Cdd:COG4935 259 GGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGSAAAAGAAAAAAAAA 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 320 SASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVV--DGVASLSVTLPSGSA 397
Cdd:COG4935 339 AGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVasAAGAVGAGTAAGASA 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 398 GVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYAGDLLVGVATVQPNG 477
Cdd:COG4935 419 TAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSTTAAAAAAAAGLATTAAVAA 498
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 2023408248 478 VATLVSSALPVGSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTV 524
Cdd:COG4935 499 GAAGAAAAAATAASVGGATGAAGTTNSTATFSNTTDVAIPDNGPAGV 545
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
59-557 |
5.41e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 48.24 E-value: 5.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 59 GLTTDPAADNTASSIDWAIHVTGGTGSAVELYHRGVLVANVGAVAAGDVLGLSYAGGVLSYSKNGVVLRQDAVQIDQPLY 138
Cdd:COG4625 5 GGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 139 LDSSFYAPGSSVSGLEFRDGTGTLTALSAKPVATGRVTFYGGGAVLGTATLVDGVASLTTQALINAGTASITAAYEGDGT 218
Cdd:COG4625 85 GGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 219 NAASTSAAMALAVGGGAGNRPATTTSLSASSTSTSRGQEVALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDL 298
Cdd:COG4625 165 GGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 299 AVGAQAWRAVYSGDAQSAPSTSASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGV 378
Cdd:COG4625 245 GGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 379 ATVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGT 458
Cdd:COG4625 325 GGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGG 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 459 VAFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPL 538
Cdd:COG4625 405 AGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTY 484
|
490
....*....|....*....
gi 2023408248 539 VLDATVTSGGRNAGIAGSV 557
Cdd:COG4625 485 TGTTTVNGGGNYTQSAGST 503
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1445-1483 |
5.91e-05 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 41.82 E-value: 5.91e-05
10 20 30
....*....|....*....|....*....|....*....
gi 2023408248 1445 YDAAGRvLTRTVDPLGLnlVTRYTYDALGNQLSVTDAQG 1483
Cdd:pfam05593 1 YDAAGR-LTSVTDPDGR--VTTYTYDAAGRLTAVTDPDG 36
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1046-1082 |
6.99e-05 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 41.43 E-value: 6.99e-05
10 20 30
....*....|....*....|....*....|....*..
gi 2023408248 1046 YDALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAGT 1082
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLTAVTDPDGT 37
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
179-724 |
9.38e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 47.47 E-value: 9.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 179 GGGAVLGTATLVDGVASLTTQALINAGTASITAAYEGDGTNAASTSAAMALAVGGGAGNRPATTTSLSASSTSTSRGQEV 258
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 259 ALTATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVGAQAWRAVYSGDAQSAPSTSASVGGTVAVSSSGVSLAA 338
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 339 TVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALV 418
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 419 LGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFS 498
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 499 GNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARL 578
Cdd:COG4625 321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 579 TLADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVALSSSATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGT 658
Cdd:COG4625 401 GGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTG 480
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2023408248 659 AQVFDGVARLVVGGlpPGTHELRARYEGDTRNAASASPALAQTVTPAGSVVLGLASDASLAQGQDI 724
Cdd:COG4625 481 NNTYTGTTTVNGGG--NYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYAPGTTYTI 544
|
|
| Big_7 |
pfam17957 |
Bacterial Ig domain; This entry represents a bacterial ig-like domain that is found in ... |
427-495 |
1.19e-04 |
|
Bacterial Ig domain; This entry represents a bacterial ig-like domain that is found in glycosyl hydrolase enzymes.
Pssm-ID: 436171 [Multi-domain] Cd Length: 67 Bit Score: 41.83 E-value: 1.19e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2023408248 427 VTIAAPSPSSAVYGSPVTLSATApYSSSTVGTVAFYAGDLLVGVATVQPNGvATLVSSALPVGSRTITA 495
Cdd:pfam17957 1 VSITSPANGATVSGGTVTISATA-SDDGGVSKVEFYVDGTLVGTDTSAPYS-FTWTTTALANGTHTITV 67
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1136-1172 |
1.42e-04 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 40.66 E-value: 1.42e-04
10 20 30
....*....|....*....|....*....|....*..
gi 2023408248 1136 YDAAGRRTSTTDQNGLKTQFFYDAASRLTHTVNALGE 1172
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLTAVTDPDGT 37
|
|
| Hia |
COG5295 |
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ... |
180-751 |
1.63e-04 |
|
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444098 [Multi-domain] Cd Length: 785 Bit Score: 46.69 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 180 GGAVLGTATLVDGVASLTTQALINAGTASITAAYEGDGTNAASTSAAMALAVGGGAGNRPATTTSLSASSTSTSRGQEVA 259
Cdd:COG5295 1 SASNAGAVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 260 LTATVSGNASGFVTffnGNQVLGVAALANGVAVWKSRDLAVGAqawrAVYSGDAQSAPSTSASVGGTVAVSSSGVSLAAT 339
Cdd:COG5295 81 SSVASGGASAATAA---STGTGNTAGTAATVAGAASSGSATNA----GASAGASAAAAAGSTAAAGGAAASTGGSSAAGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 340 VTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVL 419
Cdd:COG5295 154 SNTATATGSSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAA 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 420 GLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSG 499
Cdd:COG5295 234 SAGGSASAGAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNA 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 500 NAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLT 579
Cdd:COG5295 314 GSGGGGAAALGSAGGSSGVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGA 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 580 LADVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVALSSSATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGTA 659
Cdd:COG5295 394 GSAGSGGSSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAAS 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 660 QVFDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALAQTVTP----AGSVVLGLASDASLAQGQDIAITVGGGASGI 735
Cdd:COG5295 474 AAATAAAATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAanaaAASGATATAGSAGGGAAAAAGGGSTTAATGT 553
|
570
....*....|....*.
gi 2023408248 736 VTLVDGNNVVSIARVV 751
Cdd:COG5295 554 NSVAVGNNTATGANSV 569
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1424-1460 |
2.18e-04 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 40.27 E-value: 2.18e-04
10 20 30
....*....|....*....|....*....|....*..
gi 2023408248 1424 YDVAGRLIQATDANGVMTLLGYDAAGRvLTRTVDPLG 1460
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGR-LTAVTDPDG 36
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1299-1337 |
3.18e-04 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 39.88 E-value: 3.18e-04
10 20 30
....*....|....*....|....*....|....*....
gi 2023408248 1299 YDAFGRVTASTDALGATRTQAYDRLGRTIVLTDAMGRRS 1337
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLVEITDADGGST 39
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1564-1600 |
3.91e-04 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 39.50 E-value: 3.91e-04
10 20 30
....*....|....*....|....*....|....*..
gi 2023408248 1564 YDALGHVTSATDAQGHTTRYAYDAEGRQRFVLDAAGN 1600
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLVEITDADGG 37
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1299-1335 |
5.56e-04 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 39.12 E-value: 5.56e-04
10 20 30
....*....|....*....|....*....|....*..
gi 2023408248 1299 YDAFGRVTASTDALGATRTQAYDRLGRTIVLTDAMGR 1335
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLTAVTDPDGT 37
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1514-1542 |
6.02e-04 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 39.11 E-value: 6.02e-04
10 20
....*....|....*....|....*....
gi 2023408248 1514 YDSAGRQVSVTDPNGTVTRYEYDTLGRRV 1542
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLV 29
|
|
| Big_3_5 |
pfam16640 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
533-604 |
6.32e-04 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold.
Pssm-ID: 406933 [Multi-domain] Cd Length: 90 Bit Score: 40.31 E-value: 6.32e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2023408248 533 AAGTPLVLDATVTSGGrNAGIAGSVRFYAGSTLVGTVQA--ADGVARLTLADVPPG--ALTAVYDGFQGFAASTSQ 604
Cdd:pfam16640 5 TYGQSVTLTATVTPAS-GGTPTGTVTFTDGGTVLGTAVLvsGNGVATLTTTALAAGthTITATYSGDANYAASTSS 79
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1535-1584 |
8.17e-04 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 38.73 E-value: 8.17e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 2023408248 1535 YDTLGRrVLEVVDPSTATHaglnlakRYTYDALGHVTSATDAQGHTTRYA 1584
Cdd:TIGR01643 1 YDAAGR-LTGSTDADGTTT-------RYTYDAAGRLVEITDADGGSTRYE 42
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1046-1081 |
8.33e-04 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 38.73 E-value: 8.33e-04
10 20 30
....*....|....*....|....*....|....*.
gi 2023408248 1046 YDALNRVVLSVNAEGTATRYRYDAMGRLVETVQAAG 1081
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLVEITDADG 36
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1445-1488 |
8.33e-04 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 38.73 E-value: 8.33e-04
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2023408248 1445 YDAAGRvLTRTVDPLGLnlVTRYTYDALGNQLSVTDAQGVVTQF 1488
Cdd:TIGR01643 1 YDAAGR-LTGSTDADGT--TTRYTYDAAGRLVEITDADGGSTRY 41
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1320-1361 |
9.95e-04 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 38.34 E-value: 9.95e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 2023408248 1320 YDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALGHTTTYA 1361
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLVEITDADGGSTRYE 42
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
383-552 |
1.07e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 43.80 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 383 DGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALvlglrsaGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVA-- 460
Cdd:pfam17823 108 DGAASRALAAAASSSPSSAAQSLPAAIAALPSEAF-------SAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAas 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 461 -FYAGDLLVGVATVQPNGVATLVSSALPVgSRTITAAfsgnAGTEPPSRSTAAP-----LTITGTATQTVLTASRSALAA 534
Cdd:pfam17823 181 sTTAASSTTAASSAPTTAASSAPATLTPA-RGISTAA----TATGHPAAGTALAavgnsSPAAGTVTAAVGTVTPAALAT 255
|
170
....*....|....*...
gi 2023408248 535 GTPLVLDATVTSGGRNAG 552
Cdd:pfam17823 256 LAAAAGTVASAAGTINMG 273
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
262-753 |
1.09e-03 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 44.00 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 262 ATVSGNASGFVTFFNGNQVLGVAALANGVAVWKSRDLAVGAQAWRAVYSGDAQSAPSTSASVGGTVAVSSSGVSLAATVT 341
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 342 SRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGL 421
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 422 RSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNA 501
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 502 GTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLTLA 581
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 582 DVPPGALTAVYDGFQGFAASTSQATASAVLAAATSVALSSSATSVGTDAPVTLSARVTGRQPGGTVTFLRGDTVLGTAQV 661
Cdd:COG4625 321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 662 FDGVARLVVGGLPPGTHELRARYEGDTRNAASASPALAQTVTPAGSVVLGLASDASLAQGQDIAITVGGGASGIVTLVDG 741
Cdd:COG4625 401 GGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTG 480
|
490
....*....|..
gi 2023408248 742 NNVVSIARVVNG 753
Cdd:COG4625 481 NNTYTGTTTVNG 492
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1383-1416 |
1.12e-03 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 38.35 E-value: 1.12e-03
10 20 30
....*....|....*....|....*....|....
gi 2023408248 1383 HDRLGQTVAVTDGSGATTRYEYDADGHQTAVQTP 1416
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLTAVTDP 34
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1341-1376 |
1.13e-03 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 37.96 E-value: 1.13e-03
10 20 30
....*....|....*....|....*....|....*.
gi 2023408248 1341 YDAFGRTVTQTDALGHTTTYAYNPDERSLTVITPEG 1376
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLTAVTDPDG 36
|
|
| PRK12688 |
PRK12688 |
flagellin; Reviewed |
318-565 |
1.19e-03 |
|
flagellin; Reviewed
Pssm-ID: 171664 [Multi-domain] Cd Length: 751 Bit Score: 43.71 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 318 STSASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAARVAGLRP-GGTVTFYNNGAPIAGGVATVVDGVASLSVTLPSGS 396
Cdd:PRK12688 106 STKSNVSTTISGATADDLRGTTSYASATASSNVLYDGAAGGATAaTGATTLGGTAGSLAGTGATAGDGTTALTGTITLIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 397 AGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLS-ATAPYSSSTV----GTVA--FYAGDLLVG 469
Cdd:PRK12688 186 TNGTTATGLLGNAQPADGDTLTVNGKTITFRSGAAPASTAVPSGSGVSGNlVTDGNGNSTVylgsATVNdlLSAIDLASG 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 470 VATVQ-PNGVATLVSSALPVGSRTITaafsgnAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTPLVLDATVTSGG 548
Cdd:PRK12688 266 VQTVTiSSGAATIAVSASGGAVSAAA------AGAVTLKSSTGADLSVTGKADLLKALGLTTATGAGNATVNANRTTSAG 339
|
250
....*....|....*..
gi 2023408248 549 RNAGIagsvrFYAGSTL 565
Cdd:PRK12688 340 SLGAL-----IQDGSTL 351
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1383-1424 |
1.32e-03 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 37.95 E-value: 1.32e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 2023408248 1383 HDRLGQTVAVTDGSGATTRYEYDADGHQTAVQTPLARTTGLY 1424
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLVEITDADGGSTRYE 42
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1469-1505 |
1.42e-03 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 37.96 E-value: 1.42e-03
10 20 30
....*....|....*....|....*....|....*..
gi 2023408248 1469 YDALGNQLSVTDAQGVVTQFGYDPKGQLIrQAVDPTG 1505
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLT-AVTDPDG 36
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1320-1355 |
1.62e-03 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 37.58 E-value: 1.62e-03
10 20 30
....*....|....*....|....*....|....*.
gi 2023408248 1320 YDRLGRTIVLTDAMGRRSTSSYDAFGRTVTQTDALG 1355
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLTAVTDPDG 36
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
330-537 |
1.68e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 43.20 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 330 SSSGVSLAATVTSRSTGEATVLLAARVAGLRPGGTVTFYNNGAPIAGGVATVVDGVASLSVTLPSGSAGVTARYSGDASN 409
Cdd:COG3469 1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 410 AAAVSDALvlglRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSSTVGTVAFYAGDLLVGVATVQPNGVATLVSSALPVG 489
Cdd:COG3469 81 TATAAAAA----ATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGT 156
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2023408248 490 SRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAAGTP 537
Cdd:COG3469 157 ETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATT 204
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
375-589 |
2.57e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 42.43 E-value: 2.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 375 AGGVATVVDGVASLSVTLPSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSAVYGSPVTLSATAPYSSS 454
Cdd:COG3469 10 PTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAA 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 455 TVGTVAFYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEPPSRSTAAPLTITGTATQTVLTASRSALAA 534
Cdd:COG3469 90 TSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTT 169
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2023408248 535 GTPlvldATVTSGGRNAGIAGSVRFYAGSTLVGTVQAADGVARLTlaDVPPGALT 589
Cdd:COG3469 170 TTT----TSASTTPSATTTATATTASGATTPSATTTATTTGPPTP--GLPKHVLV 218
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
1655-1686 |
2.68e-03 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 37.19 E-value: 2.68e-03
10 20 30
....*....|....*....|....*....|..
gi 2023408248 1655 YDADNRVTATVNGAGDVVRFAYDGAGRVIQRT 1686
Cdd:pfam05593 1 YDAAGRLTSVTDPDGRVTTYTYDAAGRLTAVT 32
|
|
| Big_3_5 |
pfam16640 |
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like ... |
716-783 |
3.89e-03 |
|
Bacterial Ig-like domain (group 3); This family consists of bacterial domains with an Ig-like fold.
Pssm-ID: 406933 [Multi-domain] Cd Length: 90 Bit Score: 38.38 E-value: 3.89e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2023408248 716 ASLAQGQDIAITV------GGGASGIVTLVDGNNVV--SIARVVNGVATVSTRSLAAGRHQLTANYAADVGFGSAQ 783
Cdd:pfam16640 2 TSVTYGQSVTLTAtvtpasGGTPTGTVTFTDGGTVLgtAVLVSGNGVATLTTTALAAGTHTITATYSGDANYAAST 77
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1655-1686 |
5.52e-03 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 36.41 E-value: 5.52e-03
10 20 30
....*....|....*....|....*....|..
gi 2023408248 1655 YDADNRVTATVNGAGDVVRFAYDGAGRVIQRT 1686
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLVEIT 32
|
|
| PRK13875 |
PRK13875 |
conjugal transfer protein TrbL; Provisional |
313-437 |
8.64e-03 |
|
conjugal transfer protein TrbL; Provisional
Pssm-ID: 237537 Cd Length: 440 Bit Score: 40.66 E-value: 8.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 313 AQSAPSTSASVGGTVAVSSSGVSLAATVTSRSTGEAtvLLAARVAGLRPGGTVTFYNNGAPIAGGVATVVDGVAslSVTL 392
Cdd:PRK13875 271 AGAAVGTGLAAGGAAVAAAAGAGLAAGGGAAAAGGA--AAAARGGAAAAGGASSAYSAGAAGGSGAAGVAAGLG--GVAR 346
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2023408248 393 PSGSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTIAAPSPSSA 437
Cdd:PRK13875 347 AGASAAASPLRRAASRAAESMKSSFRAGARSTGGGAGGAAAAAAA 391
|
|
| YD_repeat_2x |
TIGR01643 |
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular ... |
1341-1381 |
8.78e-03 |
|
YD repeat (two copies); This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Pssm-ID: 273728 [Multi-domain] Cd Length: 42 Bit Score: 35.64 E-value: 8.78e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2023408248 1341 YDAFGRTVTQTDALGHTTTYAYNPDERSLTVITPEGIRVTT 1381
Cdd:TIGR01643 1 YDAAGRLTGSTDADGTTTRYTYDAAGRLVEITDADGGSTRY 41
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
315-510 |
9.60e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 40.71 E-value: 9.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 315 SAPSTS-------ASVGGTVAVSSSGVSLAATVTSRSTGEATVLLAA-RVAGLRPGGTVTfynNGAPIAGGVATvvdgva 386
Cdd:pfam17823 98 SEPATRegaadgaASRALAAAASSSPSSAAQSLPAAIAALPSEAFSApRAAACRANASAA---PRAAIAAASAP------ 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2023408248 387 slsvtlpsgSAGVTARYSGDASNAAAVSDALVLGLRSAGAVTiaapSPSSAVYGSPVTLSATAPYSSS------TVGTVA 460
Cdd:pfam17823 169 ---------HAASPAPRTAASSTTAASSTTAASSAPTTAASS----APATLTPARGISTAATATGHPAagtalaAVGNSS 235
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2023408248 461 FYAGDLLVGVATVQPNGVATLVSSALPVGSRTITAAFSGNAGTEP-PSRST 510
Cdd:pfam17823 236 PAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLsPAKHM 286
|
|
| |
