|
Name |
Accession |
Description |
Interval |
E-value |
| CitT |
COG0471 |
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; |
115-499 |
9.88e-92 |
|
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
Pssm-ID: 440239 [Multi-domain] Cd Length: 369 Bit Score: 283.97 E-value: 9.88e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 115 MGGFLLALTMERWNLHYRIALNVVLRVGTKPTRLVAGFMLATALLSMWVSNTATAMMMIPMGMAVVkmveeRRIGLQKNS 194
Cdd:COG0471 1 LGGFVLAAALEKTGLGRRIALLLLKRFGGSPLRLLLGLMLATALLSAFISNTARAAMMLPIALSIA-----AALGSEKRS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 195 KFGIALVLGIAYGATIGSFGTMLGSPANLIVVGYLRESLGVPVTFLQWMLVGVPVMIVMYVLGVLVLTkWVWRPEVDELP 274
Cdd:COG0471 76 KFGSALLLPIAFAASIGGMGTLIGTPPNLIAAGLLEEATGIPISFFEWMLVGLPVALVGLLLLWLVLY-RLLPPEIKEVP 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 275 GGRELFESELAGMGKMSTGERMIAVIFGSTAICWIALPLIfpgtWITDGVVAMTAGLLTFMMPVrpsrgvmlMDWKSA-E 353
Cdd:COG0471 155 GSKEVIREELAELGPLSRREKIALAIFALTVLLWITGSLH----GIPIAVVALLGAVLLLLTGV--------LTWKDAyK 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 354 KLPWGILLLFGGGLALSSQITGTGLSAWIGDAVAG-LGALPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGI 432
Cdd:COG0471 223 SIPWGVLLLFGGGLALGAALEKTGLAAWLADALLPlLGGLSPLLLLLLLALLTLLLTEFASNTATAALLLPIAISLAQAL 302
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2057498791 433 GADPTVFVVAAGIACMCAFMLPVGTPPNAIAFASGAVTMQQMVRTGIYMNIGAIFVVLAAGLFLVPL 499
Cdd:COG0471 303 GVNPLPLALAVAFAASCAFLLPVGTPPNAIVYGSGYYKFKDFLKVGLPLNLIGLVVLLLLGPLWWPL 369
|
|
| SLC13_permease |
cd01115 |
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ... |
63-501 |
6.92e-59 |
|
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.
Pssm-ID: 238535 [Multi-domain] Cd Length: 382 Bit Score: 198.96 E-value: 6.92e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 63 AAIGILMGVWWVSEAVPIPVTALTPLVLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERWNLHYRIALNVVLRVG 142
Cdd:cd01115 1 LAILVFAAVLFVTEALPLDVTALLVPVLLVLLGVVPPKEAFSGFSDPAVILFLAGFILGAALTRTGLAKRIATKLLKRAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 143 TKPTRLVAGFMLATALLSMWVSNTATAMMMIPMGMAVvkmveerrigLQKNSKFGIALVLGIAYGATIGSFGTMLGSPAN 222
Cdd:cd01115 81 KGERRLLLLLMLVTAFLSAFMSNTATVAIMLPVALGL----------AAKLDISPSRLLMPLAFAASIGGMLTLIGTPPN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 223 LIVVGYLRESLGVPVTFLQWMLVGVPVMIVMYVLGVLVLTKWVwrpevdelpggrelfeselagmgkmstgermiavifg 302
Cdd:cd01115 151 LVASGYLESLGGQGFSFFEFTPIGLPLLIIGLLYLWFIFRLAV------------------------------------- 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 303 sTAICWIALPLIFPGTwitdGVVAMTAGLLTFMMPVRPSRGvmLMDWKSAEKLPWGILLLFGGGLALSSQITGTGLSAWI 382
Cdd:cd01115 194 -LIITIVLLAALAAIT----GLLPVSVAIAIGAIVLVFGGV--LLTKEDYKSIDWGIIFLFAGGIPLGKALESSGAAALI 266
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 383 GDAV-AGLGALPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGIGADPTVFVVAAGIACMCAFMLPVGTPPNA 461
Cdd:cd01115 267 AEALiSLLGGLPPFAILLLLCLLTLVLTNFISNTATAVLLAPIALSIALSLGLPPEALLLAVAIGASCAFMLPVGTPPNA 346
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2057498791 462 IAFASGAVTMQQMVRTGIYMNIgaifVVLAAGLFLVPLVF 501
Cdd:cd01115 347 IVLGPGGYKFSDFAKVGLPLSI----LSLVVSVTMIPLIW 382
|
|
| dass |
TIGR00785 |
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally ... |
52-494 |
1.32e-57 |
|
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273267 [Multi-domain] Cd Length: 444 Bit Score: 197.57 E-value: 1.32e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 52 PSDLPHETRVTAAIGILMGVWWVSEAVPIPVTALTPL----VLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERW 127
Cdd:TIGR00785 3 PDGLNSGAWLLLAIFVAAIVGWILEPLPLPVTALLAIpiiaVLLGVLSAFKFKNALSGFADPTIWLFFGAFILATALVKT 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 128 NLHYRIALNVVLRVG-TKPTRLVAGFMLATALLSMWVSNTA-TAMMMIPMGMAVVKMVEERRIGLQKnsKFGIALVLGIA 205
Cdd:TIGR00785 83 GLGKRIAYKLVGKMGgTTLGLGYFLVFLETLLAPMWPSNTArAGGILLPIIKSLLPLLGSKPEKSPR--KIGKYLMLGIA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 206 YGATIGSFGTMLGSPANLIVVGYLRESLGVPVTFLQWMLVGVPVMIVMYVLGVLVLTkWVWRPEVDELPGGRELFESELA 285
Cdd:TIGR00785 161 YSASIGSSGFLTGSAPNALAAGILSKILGIQISWGDWFLAGLPLGIILLLLVPLLLY-VLFPPELKLKDEVDLWAKEELE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 286 GMGKMSTGERMIAVIFGSTAICWIALPLifpgTWITDGVVAMTAGLLTFMMPVrpsrgvmlMDWKSAEKLP--WGILLLF 363
Cdd:TIGR00785 240 EMGPMSFREKALLGIFLLALLLWIFGGS----LGINASVVALLAVVLMLFLGI--------VTWKDIQKNKvaWNTLILF 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 364 GGGLALSSQITGTGLSAWIGDAVAG--LGALPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGIGADPTVFVV 441
Cdd:TIGR00785 308 GGLIGLAGGLKKSGFIKWFSEKLVGilDGLSPTIAVLVLVVLFYIILYFFASNTAHTAALVPIFFSVASAQGIPLELLAL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2057498791 442 AAGIACMCA-FMLPVGTPPNAIAFASGAVTMQQMVRTGIYMNIGAIFVVLAAGL 494
Cdd:TIGR00785 388 ALALSASLMgFLTPYATPPNAIAYGSGYVKIKDMWRVGAIIGIVGLIVLLLVGT 441
|
|
| Na_sulph_symp |
pfam00939 |
Sodium:sulfate symporter transmembrane region; There are also some members in this family that ... |
52-494 |
5.29e-48 |
|
Sodium:sulfate symporter transmembrane region; There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.
Pssm-ID: 279307 [Multi-domain] Cd Length: 472 Bit Score: 172.56 E-value: 5.29e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 52 PSDLPHETRVTAAIGILMGVWWVSEAVPIPVTALTPLVLFPA----LSVAPLEDIAPSYASDIIFLFMGGFLLALTMERW 127
Cdd:pfam00939 23 PDGLPSKAWHLFAIFIATIVGWILEPLPMAVIALFAISLSAIligtLLAKALSWALSGFSSTTTWLVFGAFFISAAFEKT 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 128 NLHYRIALNVVLRVGTKPTRLvaGFMLATALLSMWVSNTATAMMMIPMGMAVVKMVEErRIGLQKNS----KFGIALVLG 203
Cdd:pfam00939 103 GLGRRIALVLVKKMGKRTLGL--GYGLVFSDLLLAPATPSNTARAGGIVFPIIMSLPP-AFGSDPEKgserRIGAYLMWT 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 204 IAYGATIGSFGTMLGSPANLIVVGYLRESLGVPVTFLQWMLVGVPVMIVMYVLGVLVLtKWVWRPEVDELPGGRELFESE 283
Cdd:pfam00939 180 VYQSTSITSAMFLTAMAPNLLLLGLMNSILGVTITWASWFLAAIPPGVILLLLAPLLL-YVLYPPEIKSVPDAKAIAKTE 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 284 LAGMGKMSTGERMIAVIFGSTAICWialplIFPGTW-ITDGVVAMTAGLLTFMMPVrpsrgvmlMDWKS--AEKLPWGIL 360
Cdd:pfam00939 259 LKELGPMTFREKALLGLFVLLLLLW-----IFGGSLnIDATTVAIIGLALMLLLRI--------LDWKDivKNKGAWNTL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 361 LLFGGGLALSSQITGTGLSAWIGDAVAGLGALPVWLILCVMVAVLLMLT--EFTSSTATVAAFVPVVGGIAVGI-GADPT 437
Cdd:pfam00939 326 IWLGGLIMLANGLERSGFIEWLGNTLSTSLSGFSPAMAFIIILSLFYLShyLFASATAHTAAMLPIFAAVAQAIpGAPPL 405
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2057498791 438 VFVVAAGIAC-MCAFMLPVGTPPNAIAFASGAVTMQQMVRTGIYMNIGAIFVVLAAGL 494
Cdd:pfam00939 406 LAALLLGFAIsLGGFLTPYGTGPGPIYFGSGYLKVKDWWRIGAILTIIGLLILLLLGN 463
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CitT |
COG0471 |
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; |
115-499 |
9.88e-92 |
|
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
Pssm-ID: 440239 [Multi-domain] Cd Length: 369 Bit Score: 283.97 E-value: 9.88e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 115 MGGFLLALTMERWNLHYRIALNVVLRVGTKPTRLVAGFMLATALLSMWVSNTATAMMMIPMGMAVVkmveeRRIGLQKNS 194
Cdd:COG0471 1 LGGFVLAAALEKTGLGRRIALLLLKRFGGSPLRLLLGLMLATALLSAFISNTARAAMMLPIALSIA-----AALGSEKRS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 195 KFGIALVLGIAYGATIGSFGTMLGSPANLIVVGYLRESLGVPVTFLQWMLVGVPVMIVMYVLGVLVLTkWVWRPEVDELP 274
Cdd:COG0471 76 KFGSALLLPIAFAASIGGMGTLIGTPPNLIAAGLLEEATGIPISFFEWMLVGLPVALVGLLLLWLVLY-RLLPPEIKEVP 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 275 GGRELFESELAGMGKMSTGERMIAVIFGSTAICWIALPLIfpgtWITDGVVAMTAGLLTFMMPVrpsrgvmlMDWKSA-E 353
Cdd:COG0471 155 GSKEVIREELAELGPLSRREKIALAIFALTVLLWITGSLH----GIPIAVVALLGAVLLLLTGV--------LTWKDAyK 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 354 KLPWGILLLFGGGLALSSQITGTGLSAWIGDAVAG-LGALPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGI 432
Cdd:COG0471 223 SIPWGVLLLFGGGLALGAALEKTGLAAWLADALLPlLGGLSPLLLLLLLALLTLLLTEFASNTATAALLLPIAISLAQAL 302
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2057498791 433 GADPTVFVVAAGIACMCAFMLPVGTPPNAIAFASGAVTMQQMVRTGIYMNIGAIFVVLAAGLFLVPL 499
Cdd:COG0471 303 GVNPLPLALAVAFAASCAFLLPVGTPPNAIVYGSGYYKFKDFLKVGLPLNLIGLVVLLLLGPLWWPL 369
|
|
| SLC13_permease |
cd01115 |
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ... |
63-501 |
6.92e-59 |
|
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.
Pssm-ID: 238535 [Multi-domain] Cd Length: 382 Bit Score: 198.96 E-value: 6.92e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 63 AAIGILMGVWWVSEAVPIPVTALTPLVLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERWNLHYRIALNVVLRVG 142
Cdd:cd01115 1 LAILVFAAVLFVTEALPLDVTALLVPVLLVLLGVVPPKEAFSGFSDPAVILFLAGFILGAALTRTGLAKRIATKLLKRAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 143 TKPTRLVAGFMLATALLSMWVSNTATAMMMIPMGMAVvkmveerrigLQKNSKFGIALVLGIAYGATIGSFGTMLGSPAN 222
Cdd:cd01115 81 KGERRLLLLLMLVTAFLSAFMSNTATVAIMLPVALGL----------AAKLDISPSRLLMPLAFAASIGGMLTLIGTPPN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 223 LIVVGYLRESLGVPVTFLQWMLVGVPVMIVMYVLGVLVLTKWVwrpevdelpggrelfeselagmgkmstgermiavifg 302
Cdd:cd01115 151 LVASGYLESLGGQGFSFFEFTPIGLPLLIIGLLYLWFIFRLAV------------------------------------- 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 303 sTAICWIALPLIFPGTwitdGVVAMTAGLLTFMMPVRPSRGvmLMDWKSAEKLPWGILLLFGGGLALSSQITGTGLSAWI 382
Cdd:cd01115 194 -LIITIVLLAALAAIT----GLLPVSVAIAIGAIVLVFGGV--LLTKEDYKSIDWGIIFLFAGGIPLGKALESSGAAALI 266
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 383 GDAV-AGLGALPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGIGADPTVFVVAAGIACMCAFMLPVGTPPNA 461
Cdd:cd01115 267 AEALiSLLGGLPPFAILLLLCLLTLVLTNFISNTATAVLLAPIALSIALSLGLPPEALLLAVAIGASCAFMLPVGTPPNA 346
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2057498791 462 IAFASGAVTMQQMVRTGIYMNIgaifVVLAAGLFLVPLVF 501
Cdd:cd01115 347 IVLGPGGYKFSDFAKVGLPLSI----LSLVVSVTMIPLIW 382
|
|
| dass |
TIGR00785 |
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally ... |
52-494 |
1.32e-57 |
|
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273267 [Multi-domain] Cd Length: 444 Bit Score: 197.57 E-value: 1.32e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 52 PSDLPHETRVTAAIGILMGVWWVSEAVPIPVTALTPL----VLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERW 127
Cdd:TIGR00785 3 PDGLNSGAWLLLAIFVAAIVGWILEPLPLPVTALLAIpiiaVLLGVLSAFKFKNALSGFADPTIWLFFGAFILATALVKT 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 128 NLHYRIALNVVLRVG-TKPTRLVAGFMLATALLSMWVSNTA-TAMMMIPMGMAVVKMVEERRIGLQKnsKFGIALVLGIA 205
Cdd:TIGR00785 83 GLGKRIAYKLVGKMGgTTLGLGYFLVFLETLLAPMWPSNTArAGGILLPIIKSLLPLLGSKPEKSPR--KIGKYLMLGIA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 206 YGATIGSFGTMLGSPANLIVVGYLRESLGVPVTFLQWMLVGVPVMIVMYVLGVLVLTkWVWRPEVDELPGGRELFESELA 285
Cdd:TIGR00785 161 YSASIGSSGFLTGSAPNALAAGILSKILGIQISWGDWFLAGLPLGIILLLLVPLLLY-VLFPPELKLKDEVDLWAKEELE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 286 GMGKMSTGERMIAVIFGSTAICWIALPLifpgTWITDGVVAMTAGLLTFMMPVrpsrgvmlMDWKSAEKLP--WGILLLF 363
Cdd:TIGR00785 240 EMGPMSFREKALLGIFLLALLLWIFGGS----LGINASVVALLAVVLMLFLGI--------VTWKDIQKNKvaWNTLILF 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 364 GGGLALSSQITGTGLSAWIGDAVAG--LGALPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGIGADPTVFVV 441
Cdd:TIGR00785 308 GGLIGLAGGLKKSGFIKWFSEKLVGilDGLSPTIAVLVLVVLFYIILYFFASNTAHTAALVPIFFSVASAQGIPLELLAL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2057498791 442 AAGIACMCA-FMLPVGTPPNAIAFASGAVTMQQMVRTGIYMNIGAIFVVLAAGL 494
Cdd:TIGR00785 388 ALALSASLMgFLTPYATPPNAIAYGSGYVKIKDMWRVGAIIGIVGLIVLLLVGT 441
|
|
| Na_sulph_symp |
pfam00939 |
Sodium:sulfate symporter transmembrane region; There are also some members in this family that ... |
52-494 |
5.29e-48 |
|
Sodium:sulfate symporter transmembrane region; There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.
Pssm-ID: 279307 [Multi-domain] Cd Length: 472 Bit Score: 172.56 E-value: 5.29e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 52 PSDLPHETRVTAAIGILMGVWWVSEAVPIPVTALTPLVLFPA----LSVAPLEDIAPSYASDIIFLFMGGFLLALTMERW 127
Cdd:pfam00939 23 PDGLPSKAWHLFAIFIATIVGWILEPLPMAVIALFAISLSAIligtLLAKALSWALSGFSSTTTWLVFGAFFISAAFEKT 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 128 NLHYRIALNVVLRVGTKPTRLvaGFMLATALLSMWVSNTATAMMMIPMGMAVVKMVEErRIGLQKNS----KFGIALVLG 203
Cdd:pfam00939 103 GLGRRIALVLVKKMGKRTLGL--GYGLVFSDLLLAPATPSNTARAGGIVFPIIMSLPP-AFGSDPEKgserRIGAYLMWT 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 204 IAYGATIGSFGTMLGSPANLIVVGYLRESLGVPVTFLQWMLVGVPVMIVMYVLGVLVLtKWVWRPEVDELPGGRELFESE 283
Cdd:pfam00939 180 VYQSTSITSAMFLTAMAPNLLLLGLMNSILGVTITWASWFLAAIPPGVILLLLAPLLL-YVLYPPEIKSVPDAKAIAKTE 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 284 LAGMGKMSTGERMIAVIFGSTAICWialplIFPGTW-ITDGVVAMTAGLLTFMMPVrpsrgvmlMDWKS--AEKLPWGIL 360
Cdd:pfam00939 259 LKELGPMTFREKALLGLFVLLLLLW-----IFGGSLnIDATTVAIIGLALMLLLRI--------LDWKDivKNKGAWNTL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 361 LLFGGGLALSSQITGTGLSAWIGDAVAGLGALPVWLILCVMVAVLLMLT--EFTSSTATVAAFVPVVGGIAVGI-GADPT 437
Cdd:pfam00939 326 IWLGGLIMLANGLERSGFIEWLGNTLSTSLSGFSPAMAFIIILSLFYLShyLFASATAHTAAMLPIFAAVAQAIpGAPPL 405
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2057498791 438 VFVVAAGIAC-MCAFMLPVGTPPNAIAFASGAVTMQQMVRTGIYMNIGAIFVVLAAGL 494
Cdd:pfam00939 406 LAALLLGFAIsLGGFLTPYGTGPGPIYFGSGYLKVKDWWRIGAILTIIGLLILLLLGN 463
|
|
| ArsB_NhaD_permease |
cd00625 |
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ... |
70-492 |
7.58e-33 |
|
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.
Pssm-ID: 238344 [Multi-domain] Cd Length: 396 Bit Score: 128.91 E-value: 7.58e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 70 GVWWVSEAVPIPVTALTPLVLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERWNLHYRIALNVVLRVGTKPTRLV 149
Cdd:cd00625 1 YVLIRPEKLPRAVVALLGAVLLVLLGVVSPKEALSAIDWETILLLFGMMILSAALEETGLFDRLAAKLARASKGSRRLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 150 aGFMLATALLSMWVSNTATAMMMIPMGMAVVKmveerriglQKNSKFGIALVLGIAYGATIGSFGTMLGSPANLIVVGYl 229
Cdd:cd00625 81 -LLMLLTAALSAFFSNDATAVLLTPIVLALLR---------KLGLSPPVPLLLALAFAANIGGAATPIGNPPNLIIASL- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 230 reslgVPVTFLQWMLVGVPVMIVMYVLGVLVLTKWVWRPEVDELPGGRELFESELAGMGKMSTGERMIAVIFGSTAICWI 309
Cdd:cd00625 150 -----SGLGFLDFLAFMAPPALGLLLLLLGLLYLLFRKKLLLPDEDKLTVLAEPLPARPLLKKFLLLALLLLLLFVLLFF 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 310 ALplifpgtwITDGVVAMTAGLLTFMMPVRpsrgvMLMDWKSAEKLPWGILLLFGGGLALSSQITGTGLSAWIGDAVAGL 389
Cdd:cd00625 225 FL--------IPLGLIALLGALLLLLLLVR-----GLDPEEVLKSVDWGTLLFFAGLFVLVGALESTGLLEWLAELLVAL 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 390 GALPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVV-----GGIAVGIGADPTVFVVAAGIACMCAFMLPVGTPPNAIAf 464
Cdd:cd00625 292 VGLPPLAALLLIGLLSALLSNFISNVPTVALLLPIAaslapPEPAWLALALGSTLGGNLTLIGSLANLIPLGAAENAGV- 370
|
410 420
....*....|....*....|....*...
gi 2057498791 465 asgAVTMQQMVRTGIYMNIGAIFVVLAA 492
Cdd:cd00625 371 ---GISFGEFLKVGLPLTLLSLVVSLLY 395
|
|
| CitMHS |
pfam03600 |
Citrate transporter; |
71-444 |
3.22e-28 |
|
Citrate transporter;
Pssm-ID: 460985 [Multi-domain] Cd Length: 342 Bit Score: 114.72 E-value: 3.22e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 71 VWWVSEAVPIPVTALTPLVLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERWNLHYRIALNVVLRVGTKPTRLVA 150
Cdd:pfam03600 2 VLIITEKLPRDVVALLGAVLLVLLGVLTPEEALSGIDSPTILLLLGMMIIGAILERTGLFDRLALKLLRLAGGKPRRLLV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 151 GFMLATALLSMWVSNTATAMMMIPMgmaVVKMVEERRIGLqknskfgIALVLGIAYGATIGSFGTMLGSPANLIVVGYLR 230
Cdd:pfam03600 82 ALMLATALLSAFLSNDGTVLIMIPI---VLALARRLGLPP-------SPLLIALAFAANIGGTATPIGDPPNIIIASALG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 231 ESLGVPVTFLqWMLVGVPVMIVMYVLGVLVLTKwvwrpevdeLPGGRELFESELAGMGKMSTGERMIAVIFGSTAICWIA 310
Cdd:pfam03600 152 LSFGDFGFFM-FPPVGVALLLVGLLPLLLIFRK---------LLPVRKEEEAELEELRKRAIKDKLLLAISALVLALVIL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 311 LPLIFPGTWITDGVVAMTAGLLTFmmpvrpsrgvmlmdWKSAEKLPWGILLLFGGGLALSSQITGTGLSAWIGDAVAGLG 390
Cdd:pfam03600 222 GFLLLSVLALAGALLLLLTGVLDP--------------EEALKAVDWSTLLFFAGLFILVGALEKTGLADALADALGGLS 287
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2057498791 391 alPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGIG---ADPTVFVVAAG 444
Cdd:pfam03600 288 --GLLVALALILWLSALLSAFISNVPTAALMAPIIVGMAPAAGlgdPDPLAWALAVG 342
|
|
| ArsB |
COG1055 |
Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism]; |
78-444 |
1.35e-12 |
|
Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];
Pssm-ID: 440675 [Multi-domain] Cd Length: 415 Bit Score: 69.39 E-value: 1.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 78 VPIPVTALTPLVLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERWNLHYRIALNVVLRVGTKPTRLVAGFMLATA 157
Cdd:COG1055 23 LNRAVAALLGAALLLLLGVVSLEDALEAIDWNTILFLLGMMIIVAILDESGFFEWLAIKLARRAKGSPRRLLWLLGLLTA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 158 LLSMWVSNTATAMMMIPMGMAVVKMVEERRiglqknskfgIALVLGIAYGATIGSFGTMLGSPANLIVVGYlreslgVPV 237
Cdd:COG1055 103 LLSAFLDNDTTALLLTPVVLAIARRLGLNP----------VPFLIAIVFAANIGGAATPIGNPTNIMIASA------GGL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 238 TFLQWMLVGVPVMIVMYVLGVLVLtKWVWRPEVDELPGGRELFESELAGMGKMstgeRMIAVIFGSTaicwIALPLIFPG 317
Cdd:COG1055 167 SFLDFLANLFPPSLVSLLVTLLVL-YLLFRKELPAAPDLEDDPKEAIKDRRLL----RISLLVLALL----LVGFVLHSF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 318 TWITDGVVAMTAGLLTFMMPVRPSRGVMlmdwksaEKLPWGILLLFGGGLALSSQITGTGLSAWIGDAVAGLGALPVWLI 397
Cdd:COG1055 238 LGLPPALIALLGAAVLLLLARVDVREVL-------KKVDWSTLLFFIGLFVVVGGLENTGLLDLLAELLASLTGGNLLLA 310
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2057498791 398 LCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGIGADPTVFVVAAG 444
Cdd:COG1055 311 ALLILWLSAILSAVVDNVPLVAALLPLIPDLGATGNPEPLWLALALG 357
|
|
| ArsB_NhaD_permease |
cd00625 |
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ... |
61-261 |
6.60e-11 |
|
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.
Pssm-ID: 238344 [Multi-domain] Cd Length: 396 Bit Score: 64.19 E-value: 6.60e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 61 VTAAIGILMGVWWVSEAVPIPVTALTPLVLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERWNLHYRIALNVVLR 140
Cdd:cd00625 212 ALLLLLLFVLLFFFLIPLGLIALLGALLLLLLLVRGLDPEEVLKSVDWGTLLFFAGLFVLVGALESTGLLEWLAELLVAL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 141 VGTKPTRLVAGFMLATALLSMWVSNTATAMMMIPMGMAVVKMVeerriglqknskfgiALVLGIAYGATIGSFGTMLGSP 220
Cdd:cd00625 292 VGLPPLAALLLIGLLSALLSNFISNVPTVALLLPIAASLAPPE---------------PAWLALALGSTLGGNLTLIGSL 356
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 2057498791 221 ANLIVVGYLrESLGVPVTFLQWMLVGVPVMIVMYVLGVLVL 261
Cdd:cd00625 357 ANLIPLGAA-ENAGVGISFGEFLKVGLPLTLLSLVVSLLYL 396
|
|
| P_permease |
cd01116 |
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible ... |
46-463 |
7.13e-07 |
|
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.
Pssm-ID: 238536 [Multi-domain] Cd Length: 413 Bit Score: 51.48 E-value: 7.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 46 LVYILMPSDLPHETRVTAAIGILMgvwwvseaVPIPVTALTPlvlfpalsvaPLEDIAPSYASDIIFLFMGGFLLALTME 125
Cdd:cd01116 3 ITYALIIFEKVHRTVAALAGALWL--------VILGLATLSP----------DLETIVSWVDWETLALLLGMMIIVSILS 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 126 RWNLHYRIALNVVLRVGTKPTRLVAGFMLATALLSMWVSNTATAMMMIPMGMAVVKmveerriglqKNSKFGIALVLGIA 205
Cdd:cd01116 65 ETGVFEYLAIWAVKISKGRPWRLLLLLGLLTAFLSAFLDNVTTVLLMVPVTIRLCE----------VLGLNPVPVLISEV 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 206 YGATIGSFGTMLGSPANLIVvgylreSLGVPVTFLQWMLVGVPvMIVMYVLGVLVLTKWVWRPEVDELPGGRE-LFESEL 284
Cdd:cd01116 135 IAANIGGAATLIGDPPNIMI------GSAAGLTFNDFLLHMLP-SVVLALVVTFILLYFLYRNILKAREEDVLaLAELEP 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 285 AGMGKMSTGERMIAVIFGSTAICWIALPLIfpgtWITDGVVAMTAGLLTFMMPVRPSRGVMLmdwksaEKLPWGILLLFG 364
Cdd:cd01116 208 KYPIKDKVLLLKSLTILTLVIIGFVLHSPL----GVSLGWIALLGALLLLLLADKLDFEDVL------SRVEWDTLLFFA 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 365 GGLALSSQITGTGLSAWIGDAVAGLGALPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGIGADPTVFVVAAG 444
Cdd:cd01116 278 GLFVLVGGLEELGIIEWIAELLVGVILGRIAVAVILILWISALLSAFIDNIPVTATMIPIVKDLASQLGIPLLPLWWALA 357
|
410 420
....*....|....*....|
gi 2057498791 445 I-ACMCAFMLPVGTPPNAIA 463
Cdd:cd01116 358 LgACLGGNGTLIGASANVVA 377
|
|
| CitT |
COG0471 |
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism]; |
60-264 |
2.33e-06 |
|
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
Pssm-ID: 440239 [Multi-domain] Cd Length: 369 Bit Score: 49.77 E-value: 2.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 60 RVTAAIGILMGVWWVSEA---VPIPVTALTPLVLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERWNLHYRIALN 136
Cdd:COG0471 175 KIALAIFALTVLLWITGSlhgIPIAVVALLGAVLLLLTGVLTWKDAYKSIPWGVLLLFGGGLALGAALEKTGLAAWLADA 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 137 VVLRVGTKPTRLV-AGFMLATALLSMWVSNTATAMMMIPMGMAVVKMveerrIGLQknskfGIALVLGIAYGAtigSFGT 215
Cdd:COG0471 255 LLPLLGGLSPLLLlLLLALLTLLLTEFASNTATAALLLPIAISLAQA-----LGVN-----PLPLALAVAFAA---SCAF 321
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2057498791 216 ML--GSPANLIVVGYLReslgvpVTFLQWMLVGVPVMIVMYVLGVLVLTKW 264
Cdd:COG0471 322 LLpvGTPPNAIVYGSGY------YKFKDFLKVGLPLNLIGLVVLLLLGPLW 366
|
|
| P_permease |
cd01116 |
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible ... |
109-261 |
1.78e-05 |
|
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.
Pssm-ID: 238536 [Multi-domain] Cd Length: 413 Bit Score: 46.86 E-value: 1.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 109 DIIFLFMGGFLLALTMERWNLHYRIALNVVLRVGTKPTRLVAGFMLATALLSMWVSNTATAMMMIPMgmaVVKMVEERRI 188
Cdd:cd01116 271 DTLLFFAGLFVLVGGLEELGIIEWIAELLVGVILGRIAVAVILILWISALLSAFIDNIPVTATMIPI---VKDLASQLGI 347
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2057498791 189 GLQknskfgiALVLGIAYGATIGSFGTMLGSPANLIVVGYLRESlGVPVTFLQWMLVGVPVMIVMYVLGVLVL 261
Cdd:cd01116 348 PLL-------PLWWALALGACLGGNGTLIGASANVVAAGIAEQH-GYKISFWEFLKVGFPIMLVSLILATVYL 412
|
|
| YbiR_permease |
cd01117 |
Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to ... |
149-261 |
3.37e-04 |
|
Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate sodium, sulfate, arsenite and organic anions. A typical ArsB/NhaD permease is composed of 8-13 transmembrane domains.
Pssm-ID: 238537 [Multi-domain] Cd Length: 384 Bit Score: 43.04 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 149 VAGFMLATALLSMWVSNTATAMMMIPMGMAVVKMveerriglqknskfgiaLVLGIAYGATIGSFGTMLGSPANLIVVgY 228
Cdd:cd01117 290 VLSLFLVSIGLSQLISNVPAVLLLLPFLPSADEK-----------------DWLLLAAGSTIAGNLTLLGSAANLIVA-E 351
|
90 100 110
....*....|....*....|....*....|...
gi 2057498791 229 LRESLGVPVTFLQWMLVGVPVMIVMYVLGVLVL 261
Cdd:cd01117 352 AAERRGVRLSFGEFLKYGVPLTLLTAAIGILWL 384
|
|
| DctM |
pfam06808 |
Tripartite ATP-independent periplasmic transporter, DctM component; This family contains a ... |
373-501 |
5.46e-04 |
|
Tripartite ATP-independent periplasmic transporter, DctM component; This family contains a diverse range of predicted transporter proteins. Including the DctM subunit of the bacterial and archaeal TRAP C4-dicarboxylate transport (Dct) system permease. In general, C4-dicarboxylate transport systems allow C4-dicarboxylates like succinate, fumarate, and malate to be taken up. TRAP C4-dicarboxylate carriers are secondary carriers that use an electrochemical H+ gradient as the driving force for transport. DctM is an integral membrane protein that is one of the constituents of TRAP carriers. Note that many family members are hypothetical proteins.
Pssm-ID: 284275 [Multi-domain] Cd Length: 413 Bit Score: 42.24 E-value: 5.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 373 ITGTGLSAWIGDAVAGLGALPvWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGIGADPTVFVVAAGIACMCAFM 452
Cdd:pfam06808 289 LTITGVPFKLSDWLLSLGGGN-LLFLILVNLLCLVLGMFLDPTAAIIILVPILAPAAAQLGIDPIHFGVVIVYNGSIGLI 367
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2057498791 453 lpvgTPPNAIAFASGAVtMQQMVRTGIYMNIGAIFVVLAAGLFLVPLVF 501
Cdd:pfam06808 368 ----TPPVGLALFVAAG-IAKVSFEEVVKGVVPFLFVLVPALVLIISVP 411
|
|
| dass |
TIGR00785 |
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally ... |
75-265 |
1.29e-03 |
|
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273267 [Multi-domain] Cd Length: 444 Bit Score: 41.18 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 75 SEAVPIPVTALTPLVLFPALSVAPLEDIAPSYAS-DIIFLFMGGFLLALTMERWNLHYRIALNVVLRVGTKPTRLVAGFM 153
Cdd:TIGR00785 267 SLGINASVVALLAVVLMLFLGIVTWKDIQKNKVAwNTLILFGGLIGLAGGLKKSGFIKWFSEKLVGILDGLSPTIAVLVL 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 154 LA--TALLSMWVSNTATAMMMIPMGMAVVKMVEerrIGLQknskfgiALVLGIAYGATIGSFGTMLGSPANLIV--VGYL 229
Cdd:TIGR00785 347 VVlfYIILYFFASNTAHTAALVPIFFSVASAQG---IPLE-------LLALALALSASLMGFLTPYATPPNAIAygSGYV 416
|
170 180 190
....*....|....*....|....*....|....*.
gi 2057498791 230 RESlgvpvtflQWMLVGVPVMIVMYVLGVLVLTKWV 265
Cdd:TIGR00785 417 KIK--------DMWRVGAIIGIVGLIVLLLVGTLWW 444
|
|
| YbiR_permease |
cd01117 |
Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to ... |
68-349 |
1.81e-03 |
|
Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate sodium, sulfate, arsenite and organic anions. A typical ArsB/NhaD permease is composed of 8-13 transmembrane domains.
Pssm-ID: 238537 [Multi-domain] Cd Length: 384 Bit Score: 40.72 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 68 LMGVWWVSEAVPIPVTALTPLVLFPALSVAPLEDiAPSYASDIIFLFMGGFLLALTMERWNLHYRIALNVVLRVGTKPTR 147
Cdd:cd01117 1 LALGRVPGLRLDRWAIALLGAALMLLFGVISLED-APAAIDLDTIILLFGLMVVSAALELSGFFDALGSRILVKAGSPRR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 148 LVAGFMLATALLSMWVSNTATAMMMIPMGMAVVKMVEERRIglqknskfgiALVLGIAYGATIGSFGTMLGSPANLIVVG 227
Cdd:cd01117 80 LLFLLVLLSGILSALLTNDTACLVFTPIVLELARVAGLPPI----------PLLLALATAANIGSAATPIGNPQNLLIAS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 228 YLRESlgvpvtFLQWMLVGVPVMIVMYVLgVLVLTKWVWRpevDELPGGRELFESELAGMGKMSTGERMiAVIFGSTAIC 307
Cdd:cd01117 150 ESGIS------FPFFLAAMAPLALLGLLL-LLILLLVLFP---GELKGLPLDKATKEEGVGARKLAVKL-LVLILLLLVA 218
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2057498791 308 WIALPLIFPGtwitdGVVAMTAGLLTFMMPVRPSRGVMLMDW 349
Cdd:cd01117 219 FLALLGVIPL-----WTAALVAAVLLLLTRLKPRRVLKKVDW 255
|
|
| CitMHS |
pfam03600 |
Citrate transporter; |
56-179 |
3.00e-03 |
|
Citrate transporter;
Pssm-ID: 460985 [Multi-domain] Cd Length: 342 Bit Score: 39.99 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 56 PHETRVTAAIGILMGVWWVSEAVPIPVTALTPLVLFPALSVAPLEDIAPSYASDIIFLFMGGFLLALTMERWNLHYRIAl 135
Cdd:pfam03600 202 AIKDKLLLAISALVLALVILGFLLLSVLALAGALLLLLTGVLDPEEALKAVDWSTLLFFAGLFILVGALEKTGLADALA- 280
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2057498791 136 nVVLRVGTKPTRLVAGFMLATALLSMWVSNTATAMMMIPMGMAV 179
Cdd:pfam03600 281 -DALGGLSGLLVALALILWLSALLSAFISNVPTAALMAPIIVGM 323
|
|
| CitMHS |
pfam03600 |
Citrate transporter; |
376-501 |
3.42e-03 |
|
Citrate transporter;
Pssm-ID: 460985 [Multi-domain] Cd Length: 342 Bit Score: 39.60 E-value: 3.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057498791 376 TGLSAWIGDAVAGLGALPVWLILCVMVAVLLMLTEFTSSTATVAAFVPVVGGIAVGIGADPTVFVVAAGIACMCAFML-P 454
Cdd:pfam03600 58 TGLFDRLALKLLRLAGGKPRRLLVALMLATALLSAFLSNDGTVLIMIPIVLALARRLGLPPSPLLIALAFAANIGGTAtP 137
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2057498791 455 VGTPPNAIAfasGAVTMQQMVRTGIYMNIGAIFVVLAAGLFLVPLVF 501
Cdd:pfam03600 138 IGDPPNIII---ASALGLSFGDFGFFMFPPVGVALLLVGLLPLLLIF 181
|
|
| |
