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Conserved domains on  [gi|2073742933|ref|WP_219202035|]
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DUF1365 domain-containing protein [Pseudohoeflea coraliihabitans]

Protein Classification

DUF1365 domain-containing protein( domain architecture ID 10007473)

uncharacterized DUF1365 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
COG3496 COG3496
Uncharacterized conserved protein, DUF1365 family [Function unknown];
13-278 2.15e-107

Uncharacterized conserved protein, DUF1365 family [Function unknown];


:

Pssm-ID: 442719  Cd Length: 255  Bit Score: 311.75  E-value: 2.15e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933  13 AAARLYHGPVMHQRLRPVGHRFTYRVFSLLIDIDRLDEADRLSPLFSVNKRNLAAFMETDHIRGStAATLRGHVDNLMRA 92
Cdd:COG3496     1 MASALYEGQVRHRRFRPVRHRFRYRVFMLLLDLDELDALFRRSRLFSRNRFNLLSFRDRDHGGDP-GGPLRAWVRELLAE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933  93 AGRPAETGRVLLACYPRMFGLVFNPLSVFYVYDRYDALTALIYQVRNTFGEDHTYVCPIAPGEqtAAGIRQHRRKRFYVS 172
Cdd:COG3496    80 AGGERPDGRVRLLTQPRVLGYVFNPVSFYYCYDADGQLRAILAEVNNTFGERHSYLLPVDDGI--GAGIRLRADKAFHVS 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933 173 PFIDMEMTYHFRMNEPGDTLRWRILETDAEGPLLSATYSAVAEPLCTKSVLRNLARVPLLPLKIVAGIHFEALRLWLKGV 252
Cdd:COG3496   158 PFMPMDGRYRFRFSPPGDRLRVHIDNYDGGGKLLDATLSGRRRPLTDASLLRALLRYPLMTLKVVAGIHWQALKLWLKGV 237
                         250       260
                  ....*....|....*....|....*.
gi 2073742933 253 aPVtrqpagerisaidIPHPAPATEP 278
Cdd:COG3496   238 -PF-------------HPHPAPPAEE 249
 
Name Accession Description Interval E-value
COG3496 COG3496
Uncharacterized conserved protein, DUF1365 family [Function unknown];
13-278 2.15e-107

Uncharacterized conserved protein, DUF1365 family [Function unknown];


Pssm-ID: 442719  Cd Length: 255  Bit Score: 311.75  E-value: 2.15e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933  13 AAARLYHGPVMHQRLRPVGHRFTYRVFSLLIDIDRLDEADRLSPLFSVNKRNLAAFMETDHIRGStAATLRGHVDNLMRA 92
Cdd:COG3496     1 MASALYEGQVRHRRFRPVRHRFRYRVFMLLLDLDELDALFRRSRLFSRNRFNLLSFRDRDHGGDP-GGPLRAWVRELLAE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933  93 AGRPAETGRVLLACYPRMFGLVFNPLSVFYVYDRYDALTALIYQVRNTFGEDHTYVCPIAPGEqtAAGIRQHRRKRFYVS 172
Cdd:COG3496    80 AGGERPDGRVRLLTQPRVLGYVFNPVSFYYCYDADGQLRAILAEVNNTFGERHSYLLPVDDGI--GAGIRLRADKAFHVS 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933 173 PFIDMEMTYHFRMNEPGDTLRWRILETDAEGPLLSATYSAVAEPLCTKSVLRNLARVPLLPLKIVAGIHFEALRLWLKGV 252
Cdd:COG3496   158 PFMPMDGRYRFRFSPPGDRLRVHIDNYDGGGKLLDATLSGRRRPLTDASLLRALLRYPLMTLKVVAGIHWQALKLWLKGV 237
                         250       260
                  ....*....|....*....|....*.
gi 2073742933 253 aPVtrqpagerisaidIPHPAPATEP 278
Cdd:COG3496   238 -PF-------------HPHPAPPAEE 249
DUF1365 pfam07103
Protein of unknown function (DUF1365); This family consists of several bacterial and plant ...
22-252 8.93e-83

Protein of unknown function (DUF1365); This family consists of several bacterial and plant proteins of around 250 residues in length. The function of this family is unknown.


Pssm-ID: 462090  Cd Length: 227  Bit Score: 248.25  E-value: 8.93e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933  22 VMHQRLRPVGHRFTYRVFSLLIDIDRLDEADRLspLFSVNKRNLAAFMETDHirGSTAATLRGHVDNLMRAAGrpAETGR 101
Cdd:pfam07103   2 VRHRRLRPVRHAFSYPVFMLLLDLDELDQLAAR--LFSRNRFNLLSFRDRDY--LPRGPSLREKLRALLAELG--PAGGR 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933 102 VLLACYPRMFGLVFNPLSVFYVYDRYDALTALIYQVRNTFGEDHTYVCPiapgeqtaAGIRQHRRKRFYVSPFIDMEMTY 181
Cdd:pfam07103  76 VRLLTMPRVLGYVFNPVSFYYCYDADGRLRAVVAEVNNTFGERHCYLLP--------AGDRLTAPKAFHVSPFNPMDGRY 147
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2073742933 182 HFRMNEPGDTLRWRI--LETDAEGPLLSATYSAVAEPLCTKSVLRNLARVPLLPLKIVAGIHFEALRLWLKGV 252
Cdd:pfam07103 148 RFRFSDPPERLAVRIdlHDEDDAGKKLVATLSGRRRPLTAAALLRALLRYPLMTLKVVARIHWQALKLWLKGL 220
 
Name Accession Description Interval E-value
COG3496 COG3496
Uncharacterized conserved protein, DUF1365 family [Function unknown];
13-278 2.15e-107

Uncharacterized conserved protein, DUF1365 family [Function unknown];


Pssm-ID: 442719  Cd Length: 255  Bit Score: 311.75  E-value: 2.15e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933  13 AAARLYHGPVMHQRLRPVGHRFTYRVFSLLIDIDRLDEADRLSPLFSVNKRNLAAFMETDHIRGStAATLRGHVDNLMRA 92
Cdd:COG3496     1 MASALYEGQVRHRRFRPVRHRFRYRVFMLLLDLDELDALFRRSRLFSRNRFNLLSFRDRDHGGDP-GGPLRAWVRELLAE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933  93 AGRPAETGRVLLACYPRMFGLVFNPLSVFYVYDRYDALTALIYQVRNTFGEDHTYVCPIAPGEqtAAGIRQHRRKRFYVS 172
Cdd:COG3496    80 AGGERPDGRVRLLTQPRVLGYVFNPVSFYYCYDADGQLRAILAEVNNTFGERHSYLLPVDDGI--GAGIRLRADKAFHVS 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933 173 PFIDMEMTYHFRMNEPGDTLRWRILETDAEGPLLSATYSAVAEPLCTKSVLRNLARVPLLPLKIVAGIHFEALRLWLKGV 252
Cdd:COG3496   158 PFMPMDGRYRFRFSPPGDRLRVHIDNYDGGGKLLDATLSGRRRPLTDASLLRALLRYPLMTLKVVAGIHWQALKLWLKGV 237
                         250       260
                  ....*....|....*....|....*.
gi 2073742933 253 aPVtrqpagerisaidIPHPAPATEP 278
Cdd:COG3496   238 -PF-------------HPHPAPPAEE 249
DUF1365 pfam07103
Protein of unknown function (DUF1365); This family consists of several bacterial and plant ...
22-252 8.93e-83

Protein of unknown function (DUF1365); This family consists of several bacterial and plant proteins of around 250 residues in length. The function of this family is unknown.


Pssm-ID: 462090  Cd Length: 227  Bit Score: 248.25  E-value: 8.93e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933  22 VMHQRLRPVGHRFTYRVFSLLIDIDRLDEADRLspLFSVNKRNLAAFMETDHirGSTAATLRGHVDNLMRAAGrpAETGR 101
Cdd:pfam07103   2 VRHRRLRPVRHAFSYPVFMLLLDLDELDQLAAR--LFSRNRFNLLSFRDRDY--LPRGPSLREKLRALLAELG--PAGGR 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2073742933 102 VLLACYPRMFGLVFNPLSVFYVYDRYDALTALIYQVRNTFGEDHTYVCPiapgeqtaAGIRQHRRKRFYVSPFIDMEMTY 181
Cdd:pfam07103  76 VRLLTMPRVLGYVFNPVSFYYCYDADGRLRAVVAEVNNTFGERHCYLLP--------AGDRLTAPKAFHVSPFNPMDGRY 147
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2073742933 182 HFRMNEPGDTLRWRI--LETDAEGPLLSATYSAVAEPLCTKSVLRNLARVPLLPLKIVAGIHFEALRLWLKGV 252
Cdd:pfam07103 148 RFRFSDPPERLAVRIdlHDEDDAGKKLVATLSGRRRPLTAAALLRALLRYPLMTLKVVARIHWQALKLWLKGL 220
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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