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Conserved domains on  [gi|2096638418|ref|WP_223232949|]
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DUF2778 domain-containing protein [Burkholderia pseudomallei]

Protein Classification

DUF2778 domain-containing protein( domain architecture ID 10566877)

DUF2778 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2778 pfam10908
Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.
 40-130 1.37e-28

Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.


:

Pssm-ID: 431533  Cd Length: 120  Bit Score: 101.31  E-value: 1.37e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2096638418  40 DRESGGRWGTMRDfvlehfygtDRTTWFALYRADGQIDDWTFINGVRRGSFRLHP--NGRRGLSEGCVTLVNQQDFVKLR 117
Cdd:pfam10908  36 DRESGGHLGPIRD---------PRSEWFALYRADRLIDDWTFINGVGRGGFRLHPymLGPRGDSNGCITFKNYSDFLAAR 106

                          90
                  ....*....|...
gi 2096638418 118 AALKATPMISVPG 130
Cdd:pfam10908 107 KRLERTRTVVVPG 119
 
Name Accession Description Interval E-value
DUF2778 pfam10908
Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.
 40-130 1.37e-28

Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.


Pssm-ID: 431533  Cd Length: 120  Bit Score: 101.31  E-value: 1.37e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2096638418  40 DRESGGRWGTMRDfvlehfygtDRTTWFALYRADGQIDDWTFINGVRRGSFRLHP--NGRRGLSEGCVTLVNQQDFVKLR 117
Cdd:pfam10908  36 DRESGGHLGPIRD---------PRSEWFALYRADRLIDDWTFINGVGRGGFRLHPymLGPRGDSNGCITFKNYSDFLAAR 106

                          90
                  ....*....|...
gi 2096638418 118 AALKATPMISVPG 130
Cdd:pfam10908 107 KRLERTRTVVVPG 119
 
Name Accession Description Interval E-value
DUF2778 pfam10908
Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.
 40-130 1.37e-28

Protein of unknown function (DUF2778); This is a bacterial family of uncharacterized proteins.


Pssm-ID: 431533  Cd Length: 120  Bit Score: 101.31  E-value: 1.37e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2096638418  40 DRESGGRWGTMRDfvlehfygtDRTTWFALYRADGQIDDWTFINGVRRGSFRLHP--NGRRGLSEGCVTLVNQQDFVKLR 117
Cdd:pfam10908  36 DRESGGHLGPIRD---------PRSEWFALYRADRLIDDWTFINGVGRGGFRLHPymLGPRGDSNGCITFKNYSDFLAAR 106

                          90
                  ....*....|...
gi 2096638418 118 AALKATPMISVPG 130
Cdd:pfam10908 107 KRLERTRTVVVPG 119
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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