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MULTISPECIES: choline BCCT transporter BetT [Acinetobacter]
Protein Classification
BCCT family transporter ( domain architecture ID 10003438 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Bacillus subtilis glycine betaine transporter OpuD
List of domain hits
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
3-509
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 680.72
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 3 SKQPGWFANVN P N VF FGTVII I AL F LAVVVIA P SSFELLTQQLKQ WIT DS F S WFY V L S V AF F LILLI Y I A C S SI G R I K LG 82
Cdd:COG1292 4 KNKEKFKKKID P P VF IPSALL I LA F VLWGLLF P EAAGAVLNAAFS WIT TN F G WFY L L L V LL F VVFCL Y L A F S KY G K I R LG 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 83 P D HSQ PE YNNG SWFAMLF T AGMGIGL M F F GVAEP VM H YVN PP S G - DAQTID AA QQ A LRV TFFHWGLHAWAIYA V VGLALA 161
Cdd:COG1292 84 G D DAK PE FSTF SWFAMLF S AGMGIGL V F W GVAEP LY H FLS PP P G v EPGSPE AA RW A MAY TFFHWGLHAWAIYA L VGLALA 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 162 YFAYR HN LPL KTR SALYPL I G KK IYGP W G DS IDI F A TIG TVFGVATSLG F G VT QIN S GL H YLFG VEQ S THI Q VLL I IFVS 241
Cdd:COG1292 164 YFAYR RG LPL TIS SALYPL L G DR IYGP I G KV IDI L A VFA TVFGVATSLG L G AL QIN A GL N YLFG IPN S LTV Q III I AVIT 243
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 242 I L ASL S VFL GLDKG V KRLS E LN L VLAL I LL A FV F I A GP SIYL L QTTI Q NT G Q Y IS N LFT M TFNLY AY QPN GW I GGWT IL Y 321
Cdd:COG1292 244 A L FTI S AVS GLDKG I KRLS N LN M VLAL L LL L FV L I V GP TLFI L NLFV Q SL G D Y LQ N FVP M SLWTD AY GDT GW L GGWT VF Y 323
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 322 WAWWI S W S PFVG M FIAR V SRGRTIREF IV GVLL I PT G FT II W MGFL G NA A LFSIIHE h QTT L IQ AV QQDSSV ALF EF L GH 401
Cdd:COG1292 324 WAWWI A W A PFVG L FIAR I SRGRTIREF VL GVLL V PT L FT FL W FSVF G GT A IHLELNG - GGD L AE AV AAGVEA ALF AL L EQ 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 402 LP WSGVMNI LA T ILV VL FFVTSADSG A LV TDY LT AK - T E NS P T WQR L FW T VL MAVL A II LLL V GGL A ALQ SSI I MS ALPF 480
Cdd:COG1292 403 LP LGTILSV LA I ILV II FFVTSADSG S LV LAM LT SG g D E EP P R WQR I FW G VL IGLV A AV LLL A GGL S ALQ TAS I IT ALPF 482
490 500
....*....|....*....|....*....
gi 2105040256 481 TV V M LLM SWG L I KAL HL D VTKMTAIQEAR 509
Cdd:COG1292 483 SF V L LLM CVS L V KAL RE D PRRLRSAEAEA 511
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
3-509
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 680.72
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 3 SKQPGWFANVN P N VF FGTVII I AL F LAVVVIA P SSFELLTQQLKQ WIT DS F S WFY V L S V AF F LILLI Y I A C S SI G R I K LG 82
Cdd:COG1292 4 KNKEKFKKKID P P VF IPSALL I LA F VLWGLLF P EAAGAVLNAAFS WIT TN F G WFY L L L V LL F VVFCL Y L A F S KY G K I R LG 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 83 P D HSQ PE YNNG SWFAMLF T AGMGIGL M F F GVAEP VM H YVN PP S G - DAQTID AA QQ A LRV TFFHWGLHAWAIYA V VGLALA 161
Cdd:COG1292 84 G D DAK PE FSTF SWFAMLF S AGMGIGL V F W GVAEP LY H FLS PP P G v EPGSPE AA RW A MAY TFFHWGLHAWAIYA L VGLALA 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 162 YFAYR HN LPL KTR SALYPL I G KK IYGP W G DS IDI F A TIG TVFGVATSLG F G VT QIN S GL H YLFG VEQ S THI Q VLL I IFVS 241
Cdd:COG1292 164 YFAYR RG LPL TIS SALYPL L G DR IYGP I G KV IDI L A VFA TVFGVATSLG L G AL QIN A GL N YLFG IPN S LTV Q III I AVIT 243
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 242 I L ASL S VFL GLDKG V KRLS E LN L VLAL I LL A FV F I A GP SIYL L QTTI Q NT G Q Y IS N LFT M TFNLY AY QPN GW I GGWT IL Y 321
Cdd:COG1292 244 A L FTI S AVS GLDKG I KRLS N LN M VLAL L LL L FV L I V GP TLFI L NLFV Q SL G D Y LQ N FVP M SLWTD AY GDT GW L GGWT VF Y 323
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 322 WAWWI S W S PFVG M FIAR V SRGRTIREF IV GVLL I PT G FT II W MGFL G NA A LFSIIHE h QTT L IQ AV QQDSSV ALF EF L GH 401
Cdd:COG1292 324 WAWWI A W A PFVG L FIAR I SRGRTIREF VL GVLL V PT L FT FL W FSVF G GT A IHLELNG - GGD L AE AV AAGVEA ALF AL L EQ 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 402 LP WSGVMNI LA T ILV VL FFVTSADSG A LV TDY LT AK - T E NS P T WQR L FW T VL MAVL A II LLL V GGL A ALQ SSI I MS ALPF 480
Cdd:COG1292 403 LP LGTILSV LA I ILV II FFVTSADSG S LV LAM LT SG g D E EP P R WQR I FW G VL IGLV A AV LLL A GGL S ALQ TAS I IT ALPF 482
490 500
....*....|....*....|....*....
gi 2105040256 481 TV V M LLM SWG L I KAL HL D VTKMTAIQEAR 509
Cdd:COG1292 483 SF V L LLM CVS L V KAL RE D PRRLRSAEAEA 511
PRK09928
PRK09928 choline transport protein BetT; Provisional
12-654
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 639.05
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 12 V NP N VF FGTVII I A LF LAVVVIAPSSFELLTQQLKQ W ITDS F S W F Y V L SVAFFLILL I Y IACS SI G R IKLGP DH S Q PE YN 91
Cdd:PRK09928 15 I NP V VF YTSAGL I L LF SLTTILFTDFSNRWINRTLN W VSKT F G W Y Y L L AATLYIVFV I F IACS RF G S IKLGP EQ S K PE FS 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 92 NG SW F AMLF T AG M GI G LMFF G VAEPV MH Y VN PP S G DA QTI D AA Q QA LRV T F FH W GL HA W AI YA VV G L AL A YF A YR H NLPL 171
Cdd:PRK09928 95 LL SW A AMLF A AG I GI D LMFF S VAEPV TQ Y MQ PP E G AG QTI E AA R QA MVW T L FH Y GL TG W SM YA LM G M AL G YF S YR Y NLPL 174
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 172 KT RSALYP LI GK K I Y GP W G D S I DI F A T IGT V FG V AT S LG F GV T Q I N S GL HY LF GVEQ S THI Q VL LI IFVS I L A SL SV FL G 251
Cdd:PRK09928 175 TI RSALYP IF GK R I N GP I G H S V DI A A V IGT I FG I AT T LG I GV V Q L N Y GL SV LF DIPE S LAA Q AA LI ALSV I I A TI SV TS G 254
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 252 LD KG VKR LSELN LV LAL I L LA FV FIA G PSIY LL QTTIQ N T G Q Y ISNLFT MT F N LY A Y - Q P NG W IGG WT ILY WAWW IS WSP 330
Cdd:PRK09928 255 VN KG IRV LSELN VL LAL G L IL FV LFM G DTSF LL NALVL N V G D Y VNRFMG MT L N SF A F d R P TE W MNN WT LFF WAWW VA WSP 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 331 FVG M F I AR V SRGRTIR E F IV G V L L IP TG FT II W MGFL GN A AL FS IIH EHQ t TLIQAVQQDSSVALFEF L GHL P WSGVMNI 410
Cdd:PRK09928 335 FVG L F L AR I SRGRTIR Q F VL G T L I IP FT FT LL W LSIF GN S AL YE IIH GNA - AFAEEAMAHPERGFYSL L AQY P AFTFSAS 413
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 411 L ATI LVV LF F VTSADSGALV TDYL T A K TEN ---- S P T W Q R L FW T V LMAV L AIIL L LVG G LA ALQ SSIIMSA LPF TV V MLL 486
Cdd:PRK09928 414 V ATI TGL LF Y VTSADSGALV LGNF T S K LKD insd A P N W L R V FW S V AIGL L TLGM L MTN G IS ALQ NTTVIMG LPF SF V IFF 493
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 487 MSW GL I K A L HL - D VTKMT A IQEARITPRAIHNPRS W Q QRL GLI M H YP HS e EEV R EYIEKQVSR A F E NIKH E F R R R HLE V S 565
Cdd:PRK09928 494 VMA GL Y K S L KV e D YRRAS A NRDTAPRLVGLQDRLN W K QRL SRV M N YP GT - RYT R RMLDTVCRP A M E EVAQ E L R L R GAY V E 572
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 566 ITQ L EDG ------- MQ L R V DHHH E I NF I Y KVVSRETVP P S F LI g R TEAEDGQ Y FQA E V FL R EG G Q NY D V MD WTQ E DL I Q D 638
Cdd:PRK09928 573 LNE L PPE ederlgh LD L L V HLGD E Q NF V Y QIWPQRYSV P G F TY - R ARSGKST Y YRL E T FL L EG S Q GN D L MD YSK E QV I N D 651
650
....*....|....*.
gi 2105040256 639 I I DQYERHL Y FL NIV R 654
Cdd:PRK09928 652 I L DQYERHL N FL HLH R 667
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
16-498
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 625.33
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 16 VF FGTVII I AL F LAVVV I A P SSFELLTQQLKQ WITD S F S WFY V L S V AF FL ILLIYI A C S SI G R I K LG P D HSQ PE YNNG SW 95
Cdd:pfam02028 1 VF AVSAGL I LA F VLLGL I F P EALSAVVNTALD WITD N F G WFY L L L V LI FL VFALFL A F S RY G N I R LG G D DDK PE FSTF SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 96 FAMLF T AGMGIGL M F F GVAEP VM HY VN - PP S G DAQ T ID AAQQA LRV TFFHWGLHAWAIYA V V G LALAYFAYR HN LPL KTR 174
Cdd:pfam02028 81 FAMLF A AGMGIGL V F W GVAEP LS HY LS p PP G G EPG T PE AAQQA MAY TFFHWGLHAWAIYA L V A LALAYFAYR KG LPL LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 175 SALYPL I G KK I Y GP W G DS IDI F A T I G TVFGVATSLG F G VT QIN S GL H YLFG VEQSTHI Q VLL I IFVSI L ASL S VFL GLDK 254
Cdd:pfam02028 161 SALYPL L G DR I D GP I G KA IDI L A I I A TVFGVATSLG L G AL QIN A GL S YLFG IPNTLTT Q LAI I AIITA L FTI S AVS GLDK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 255 G V KRLS E LN LV LA LI LL A FV F IAGP SIYL L Q T TI Q NT G Q Y IS N LFT M T F NLYAYQPN G - W I GGWTI L YWAWWI S W S PFVG 333
Cdd:pfam02028 241 G I KRLS N LN MY LA VA LL L FV L IAGP TLFI L N T FV Q SL G D Y LQ N FVP M S F YTDPFGDT G g W L GGWTI F YWAWWI A W A PFVG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 334 MFIAR V SRGRTIREFI V GVLL I PT G FT II W MGFL G NA A LF s IIHEHQTT L IQ AV QQDSSV ALF EF L GH LP WSGVMNI LA T 413
Cdd:pfam02028 321 MFIAR I SRGRTIREFI L GVLL V PT L FT FL W FSVF G GT A IY - LELNGPGD L AD AV EAGPPA ALF AL L EQ LP LGTILSV LA L 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 414 I L VVL FFVTSADSG A LV TDY L TAK - TE N S P T WQR L FW T VL MAVL A II LLL V GGL A ALQS SI I MS ALPF TVVM LLM SWG L I 492
Cdd:pfam02028 400 L L III FFVTSADSG T LV IAM L SSG g DL N P P R WQR V FW G VL LGAV A AV LLL A GGL E ALQS AS I IA ALPF SFIL LLM CIS L F 479
....*.
gi 2105040256 493 KAL HLD 498
Cdd:pfam02028 480 KAL REE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
54-498
3.42e-169
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 491.10
E-value: 3.42e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 54 S W F Y V L S V AF FL ILLI YIA C S SI G R I K LG P D HSQ PE YNNG SW F AMLF T AGMG I GLMF F GVAEP VMH Y VN PP S G DAQ T I - D 132
Cdd:TIGR00842 1 G W A Y I L T V TL FL GFVL YIA F S RY G K I R LG R D DEK PE FSTL SW L AMLF A AGMG A GLMF W GVAEP LTY Y LT PP F G AGP T S t T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 133 A AQ QAL RV T F FHWG L H A WAIYA V VGLALAYF AY R HN LPL KTR SAL Y PL I G K K IY GP W G DS IDI F A TIG TVFGVATSLG F G 212
Cdd:TIGR00842 81 A QE QAL AY T L FHWG I H P WAIYA L VGLALAYF HF R KG LPL RLS SAL V PL L G E K VN GP I G KA IDI L A LVA TVFGVATSLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 213 VT QIN S GL HY LFG VEQ S THI Q V L L I IF V SI LA SL SV FL G LD KG V K R LS EL N LV LA LI LL A FV F I A GP SIY LL QTTIQNT G 292
Cdd:TIGR00842 161 AP QIN A GL SA LFG IPD S FWL Q A L I I LC V TA LA CI SV AS G VG KG I K I LS NI N MA LA FL LL L FV L I V GP TVF LL NSFVDSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 293 Q Y IS N LFT M T F NLYAYQ - PN GW I GGWT IL YWAWWISWSPFVGMFIAR V SRGRTIREFI V GVLL I PT G FT II W MGFL GN A A 371
Cdd:TIGR00842 241 N Y LQ N FPQ M S F RTDPDD g KG GW P GGWT VF YWAWWISWSPFVGMFIAR I SRGRTIREFI F GVLL G PT A FT WL W FSVF GN S A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 372 L FSIIHEHQTTLIQA V QQDSSV ALF EF L GH LP WSGVMNI LA T IL VVL FF V TSADS GA LV TDYL T AKT ---- E NS P T W Q R L 447
Cdd:TIGR00842 321 L LLQQNGGFINGPFV V ETNGAR ALF GL L AA LP LGTITMA LA L IL III FF I TSADS AS LV LANT T SRG gqlg E EP P K W V R V 400
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 2105040256 448 FW T V LMAVL A I - I L LLV G G LAALQ SSI I MS ALPF TV VML LMSWG LIK A L HL D 498
Cdd:TIGR00842 401 FW A V AIGLI A L v L L FSG G S LAALQ TTT I IA ALPF SF VML VVMFS LIK D L KQ D 452
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
3-509
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 680.72
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 3 SKQPGWFANVN P N VF FGTVII I AL F LAVVVIA P SSFELLTQQLKQ WIT DS F S WFY V L S V AF F LILLI Y I A C S SI G R I K LG 82
Cdd:COG1292 4 KNKEKFKKKID P P VF IPSALL I LA F VLWGLLF P EAAGAVLNAAFS WIT TN F G WFY L L L V LL F VVFCL Y L A F S KY G K I R LG 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 83 P D HSQ PE YNNG SWFAMLF T AGMGIGL M F F GVAEP VM H YVN PP S G - DAQTID AA QQ A LRV TFFHWGLHAWAIYA V VGLALA 161
Cdd:COG1292 84 G D DAK PE FSTF SWFAMLF S AGMGIGL V F W GVAEP LY H FLS PP P G v EPGSPE AA RW A MAY TFFHWGLHAWAIYA L VGLALA 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 162 YFAYR HN LPL KTR SALYPL I G KK IYGP W G DS IDI F A TIG TVFGVATSLG F G VT QIN S GL H YLFG VEQ S THI Q VLL I IFVS 241
Cdd:COG1292 164 YFAYR RG LPL TIS SALYPL L G DR IYGP I G KV IDI L A VFA TVFGVATSLG L G AL QIN A GL N YLFG IPN S LTV Q III I AVIT 243
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 242 I L ASL S VFL GLDKG V KRLS E LN L VLAL I LL A FV F I A GP SIYL L QTTI Q NT G Q Y IS N LFT M TFNLY AY QPN GW I GGWT IL Y 321
Cdd:COG1292 244 A L FTI S AVS GLDKG I KRLS N LN M VLAL L LL L FV L I V GP TLFI L NLFV Q SL G D Y LQ N FVP M SLWTD AY GDT GW L GGWT VF Y 323
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 322 WAWWI S W S PFVG M FIAR V SRGRTIREF IV GVLL I PT G FT II W MGFL G NA A LFSIIHE h QTT L IQ AV QQDSSV ALF EF L GH 401
Cdd:COG1292 324 WAWWI A W A PFVG L FIAR I SRGRTIREF VL GVLL V PT L FT FL W FSVF G GT A IHLELNG - GGD L AE AV AAGVEA ALF AL L EQ 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 402 LP WSGVMNI LA T ILV VL FFVTSADSG A LV TDY LT AK - T E NS P T WQR L FW T VL MAVL A II LLL V GGL A ALQ SSI I MS ALPF 480
Cdd:COG1292 403 LP LGTILSV LA I ILV II FFVTSADSG S LV LAM LT SG g D E EP P R WQR I FW G VL IGLV A AV LLL A GGL S ALQ TAS I IT ALPF 482
490 500
....*....|....*....|....*....
gi 2105040256 481 TV V M LLM SWG L I KAL HL D VTKMTAIQEAR 509
Cdd:COG1292 483 SF V L LLM CVS L V KAL RE D PRRLRSAEAEA 511
PRK09928
PRK09928 choline transport protein BetT; Provisional
12-654
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 639.05
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 12 V NP N VF FGTVII I A LF LAVVVIAPSSFELLTQQLKQ W ITDS F S W F Y V L SVAFFLILL I Y IACS SI G R IKLGP DH S Q PE YN 91
Cdd:PRK09928 15 I NP V VF YTSAGL I L LF SLTTILFTDFSNRWINRTLN W VSKT F G W Y Y L L AATLYIVFV I F IACS RF G S IKLGP EQ S K PE FS 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 92 NG SW F AMLF T AG M GI G LMFF G VAEPV MH Y VN PP S G DA QTI D AA Q QA LRV T F FH W GL HA W AI YA VV G L AL A YF A YR H NLPL 171
Cdd:PRK09928 95 LL SW A AMLF A AG I GI D LMFF S VAEPV TQ Y MQ PP E G AG QTI E AA R QA MVW T L FH Y GL TG W SM YA LM G M AL G YF S YR Y NLPL 174
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 172 KT RSALYP LI GK K I Y GP W G D S I DI F A T IGT V FG V AT S LG F GV T Q I N S GL HY LF GVEQ S THI Q VL LI IFVS I L A SL SV FL G 251
Cdd:PRK09928 175 TI RSALYP IF GK R I N GP I G H S V DI A A V IGT I FG I AT T LG I GV V Q L N Y GL SV LF DIPE S LAA Q AA LI ALSV I I A TI SV TS G 254
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 252 LD KG VKR LSELN LV LAL I L LA FV FIA G PSIY LL QTTIQ N T G Q Y ISNLFT MT F N LY A Y - Q P NG W IGG WT ILY WAWW IS WSP 330
Cdd:PRK09928 255 VN KG IRV LSELN VL LAL G L IL FV LFM G DTSF LL NALVL N V G D Y VNRFMG MT L N SF A F d R P TE W MNN WT LFF WAWW VA WSP 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 331 FVG M F I AR V SRGRTIR E F IV G V L L IP TG FT II W MGFL GN A AL FS IIH EHQ t TLIQAVQQDSSVALFEF L GHL P WSGVMNI 410
Cdd:PRK09928 335 FVG L F L AR I SRGRTIR Q F VL G T L I IP FT FT LL W LSIF GN S AL YE IIH GNA - AFAEEAMAHPERGFYSL L AQY P AFTFSAS 413
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 411 L ATI LVV LF F VTSADSGALV TDYL T A K TEN ---- S P T W Q R L FW T V LMAV L AIIL L LVG G LA ALQ SSIIMSA LPF TV V MLL 486
Cdd:PRK09928 414 V ATI TGL LF Y VTSADSGALV LGNF T S K LKD insd A P N W L R V FW S V AIGL L TLGM L MTN G IS ALQ NTTVIMG LPF SF V IFF 493
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 487 MSW GL I K A L HL - D VTKMT A IQEARITPRAIHNPRS W Q QRL GLI M H YP HS e EEV R EYIEKQVSR A F E NIKH E F R R R HLE V S 565
Cdd:PRK09928 494 VMA GL Y K S L KV e D YRRAS A NRDTAPRLVGLQDRLN W K QRL SRV M N YP GT - RYT R RMLDTVCRP A M E EVAQ E L R L R GAY V E 572
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 566 ITQ L EDG ------- MQ L R V DHHH E I NF I Y KVVSRETVP P S F LI g R TEAEDGQ Y FQA E V FL R EG G Q NY D V MD WTQ E DL I Q D 638
Cdd:PRK09928 573 LNE L PPE ederlgh LD L L V HLGD E Q NF V Y QIWPQRYSV P G F TY - R ARSGKST Y YRL E T FL L EG S Q GN D L MD YSK E QV I N D 651
650
....*....|....*.
gi 2105040256 639 I I DQYERHL Y FL NIV R 654
Cdd:PRK09928 652 I L DQYERHL N FL HLH R 667
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
16-498
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 625.33
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 16 VF FGTVII I AL F LAVVV I A P SSFELLTQQLKQ WITD S F S WFY V L S V AF FL ILLIYI A C S SI G R I K LG P D HSQ PE YNNG SW 95
Cdd:pfam02028 1 VF AVSAGL I LA F VLLGL I F P EALSAVVNTALD WITD N F G WFY L L L V LI FL VFALFL A F S RY G N I R LG G D DDK PE FSTF SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 96 FAMLF T AGMGIGL M F F GVAEP VM HY VN - PP S G DAQ T ID AAQQA LRV TFFHWGLHAWAIYA V V G LALAYFAYR HN LPL KTR 174
Cdd:pfam02028 81 FAMLF A AGMGIGL V F W GVAEP LS HY LS p PP G G EPG T PE AAQQA MAY TFFHWGLHAWAIYA L V A LALAYFAYR KG LPL LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 175 SALYPL I G KK I Y GP W G DS IDI F A T I G TVFGVATSLG F G VT QIN S GL H YLFG VEQSTHI Q VLL I IFVSI L ASL S VFL GLDK 254
Cdd:pfam02028 161 SALYPL L G DR I D GP I G KA IDI L A I I A TVFGVATSLG L G AL QIN A GL S YLFG IPNTLTT Q LAI I AIITA L FTI S AVS GLDK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 255 G V KRLS E LN LV LA LI LL A FV F IAGP SIYL L Q T TI Q NT G Q Y IS N LFT M T F NLYAYQPN G - W I GGWTI L YWAWWI S W S PFVG 333
Cdd:pfam02028 241 G I KRLS N LN MY LA VA LL L FV L IAGP TLFI L N T FV Q SL G D Y LQ N FVP M S F YTDPFGDT G g W L GGWTI F YWAWWI A W A PFVG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 334 MFIAR V SRGRTIREFI V GVLL I PT G FT II W MGFL G NA A LF s IIHEHQTT L IQ AV QQDSSV ALF EF L GH LP WSGVMNI LA T 413
Cdd:pfam02028 321 MFIAR I SRGRTIREFI L GVLL V PT L FT FL W FSVF G GT A IY - LELNGPGD L AD AV EAGPPA ALF AL L EQ LP LGTILSV LA L 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 414 I L VVL FFVTSADSG A LV TDY L TAK - TE N S P T WQR L FW T VL MAVL A II LLL V GGL A ALQS SI I MS ALPF TVVM LLM SWG L I 492
Cdd:pfam02028 400 L L III FFVTSADSG T LV IAM L SSG g DL N P P R WQR V FW G VL LGAV A AV LLL A GGL E ALQS AS I IA ALPF SFIL LLM CIS L F 479
....*.
gi 2105040256 493 KAL HLD 498
Cdd:pfam02028 480 KAL REE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
54-498
3.42e-169
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 491.10
E-value: 3.42e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 54 S W F Y V L S V AF FL ILLI YIA C S SI G R I K LG P D HSQ PE YNNG SW F AMLF T AGMG I GLMF F GVAEP VMH Y VN PP S G DAQ T I - D 132
Cdd:TIGR00842 1 G W A Y I L T V TL FL GFVL YIA F S RY G K I R LG R D DEK PE FSTL SW L AMLF A AGMG A GLMF W GVAEP LTY Y LT PP F G AGP T S t T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 133 A AQ QAL RV T F FHWG L H A WAIYA V VGLALAYF AY R HN LPL KTR SAL Y PL I G K K IY GP W G DS IDI F A TIG TVFGVATSLG F G 212
Cdd:TIGR00842 81 A QE QAL AY T L FHWG I H P WAIYA L VGLALAYF HF R KG LPL RLS SAL V PL L G E K VN GP I G KA IDI L A LVA TVFGVATSLG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 213 VT QIN S GL HY LFG VEQ S THI Q V L L I IF V SI LA SL SV FL G LD KG V K R LS EL N LV LA LI LL A FV F I A GP SIY LL QTTIQNT G 292
Cdd:TIGR00842 161 AP QIN A GL SA LFG IPD S FWL Q A L I I LC V TA LA CI SV AS G VG KG I K I LS NI N MA LA FL LL L FV L I V GP TVF LL NSFVDSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 293 Q Y IS N LFT M T F NLYAYQ - PN GW I GGWT IL YWAWWISWSPFVGMFIAR V SRGRTIREFI V GVLL I PT G FT II W MGFL GN A A 371
Cdd:TIGR00842 241 N Y LQ N FPQ M S F RTDPDD g KG GW P GGWT VF YWAWWISWSPFVGMFIAR I SRGRTIREFI F GVLL G PT A FT WL W FSVF GN S A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 372 L FSIIHEHQTTLIQA V QQDSSV ALF EF L GH LP WSGVMNI LA T IL VVL FF V TSADS GA LV TDYL T AKT ---- E NS P T W Q R L 447
Cdd:TIGR00842 321 L LLQQNGGFINGPFV V ETNGAR ALF GL L AA LP LGTITMA LA L IL III FF I TSADS AS LV LANT T SRG gqlg E EP P K W V R V 400
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 2105040256 448 FW T V LMAVL A I - I L LLV G G LAALQ SSI I MS ALPF TV VML LMSWG LIK A L HL D 498
Cdd:TIGR00842 401 FW A V AIGLI A L v L L FSG G S LAALQ TTT I IA ALPF SF VML VVMFS LIK D L KQ D 452
PRK09950
PRK09950 putative transporter; Provisional
11-504
1.12e-68
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 232.37
E-value: 1.12e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 11 NVNPNVFFGTVIII A L F LA V VVIA -- P SSFELLTQQLK QW I T DS F SWFYV L S V AFFL IL LI Y I A C S SI G R I K LG pd HSQ P 88
Cdd:PRK09950 5 KKKKDKPLISTSLL A V F FI V AALS lf P QQSAAAANTIF QW V T RT F GSPVQ L F V LLAM IL VL Y L A T S KY G N I R LG -- EGK P 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 89 EY NNG SW FA M LFT AG M G IGLMFF GV A E PVMH Y VN P P - SGDAQTID A AQQALRVT FFHWG LH AWA I YA VVG L AL AY - F AY R 166
Cdd:PRK09950 83 EY STL SW LF M FIC AG L G SSTLYW GV M E WAYY Y QT P G l NIAPRSPK A LEYSVSYS FFHWG IS AWA T YA LAS L IM AY h F HV R 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 167 H N LP L KTRSALYPLI G K K IY GPWG DSI D IFAT I G TV FGVAT SL GFGVTQINS GL HY L F G VEQSTHI Q VLL I IFVSILAS L 246
Cdd:PRK09950 163 K N KG L SLSGIIAAIT G V K PQ GPWG RLV D LMFL I A TV GALTI SL VVTAATFTR GL SA L T G LPNNFTV Q AFV I LLSGVIFC L 242
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 247 S VFL G L D K G VK RLS ELNLVL A LILLAF V F I A GP SIYLLQTT I QNT G QYIS N LFT M TFNLYAYQPNGWIGG WT IL YW A WWI 326
Cdd:PRK09950 243 S SYI G I D N G LQ RLS KMVGWG A FLFALL V L I V GP TEFITNNI I NSI G LTTQ N FLQ M SLFTDPMGDGSFTRN WT VF YW L WWI 322
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 327 S WS P F V G MF IA RVSRGR T I R E F I V G VL L IPTGFTIIWM G F L GNA A LFSI I HEHQTTLIQAVQQDSSV A LFEF L GH LP WSG 406
Cdd:PRK09950 323 S YT P G V A MF VT RVSRGR K I K E V I W G LI L GSSVGCWFFF G V L ESY A IHQF I NGVINVPQILNTLGGET A VQQL L SS LP AGK 402
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 407 VMNILATILVVL F FVTSA D S ----- G A LV T DY L TAKTENSPT w Q RLFW T V LMAVLAI - IL LLVGG L AALQSSIIMS ALPF 480
Cdd:PRK09950 403 LFLAAYLGIMII F LASHM D A vaytm A A TS T RN L REGDDPDRG - L RLFW C V VITLIPL s IL FTGAS L DTMKTTVVLT ALPF 481
490 500
....*....|....*....|....
gi 2105040256 481 T V VM L LMSW G L I KA L HL D VTKMT A 504
Cdd:PRK09950 482 L V IL L IKVY G F I RW L KQ D YADVP A 505
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
12-493
1.51e-66
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 226.92
E-value: 1.51e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 12 VN P N VFF GTV II IALFLAVV V IAPSSFELLTQQLKQWI T DSFS W FYVLSVAFF L ILLIYIACSSIGRIK LG PD hs Q PE YN 91
Cdd:PRK03356 10 IE P K VFF PPL II VGILCWLT V RDLDAANVVINAVFSYV T NVWG W AFEWYMVVM L FGWFWLVFGPYAKKR LG DE -- K PE FS 87
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 92 NG SW FA M L F TAGMGIGLM F F G VA E PVMHYVN PP S G - DAQTID A AQQA L RVTF FHWG LHA WA I Y AVVGL A LA YF AY - R HNL 169
Cdd:PRK03356 88 TA SW IF M M F ASCTSAAVL F W G SI E IYYYIST PP F G l EPNSTG A KELG L AYSL FHWG PLP WA T Y SFLSV A FG YF FF v R KMD 167
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 170 PLKTR S A L Y PL I G K K - IY G PW G DSI D I F ATIGTV F GVA TSLG FGVTQINSGLHY LFG VEQSTHIQVLL I IFVS IL ASLS V 248
Cdd:PRK03356 168 VIRPS S T L V PL V G E K h AK G LF G TIV D N F YLVALI F AMG TSLG LATPLVTECMQW LFG IPHTLQLDAII I TCWI IL NAIC V 247
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 249 FL GL D KGV KRL S ELNLV L ALIL L AF VFI A G PSIYLLQTTIQNT G QYISN L FT M T F NLYAYQPN G WIG GWT IL YWAWW ISW 328
Cdd:PRK03356 248 AC GL Q KGV RIA S DVRSY L SFLM L GW VFI V G GTSFIMNYFTDSV G MLLMY L PR M L F YTDPIGKG G FPQ GWT VF YWAWW VIY 327
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 329 SPFVGM F I AR V SRGRT I RE FIV G VL L IP T GF T I I WMGF LG NAA L F s IIHEHQTTLIQAVQ Q DSSV - A LF E FLGH LP W S GV 407
Cdd:PRK03356 328 AIQMSI F L AR I SRGRT V RE LCF G MV L GL T AS T W I LWTV LG SNT L L - LMDKNIINIPNLIE Q YGVA r A II E TWAA LP L S TA 406
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2105040256 408 MNILAT IL VVLFF VT SADSG ---- A LV T DYLTAKT E NS P TWQ R LF W TV L MAVLA I I LL LV GGL AAL Q SS II MSAL P FTV V 483
Cdd:PRK03356 407 TMWGFF IL CFIAT VT LINAC sytl A MS T CREVRDG E EP P LLV R IG W SI L VGIIG I V LL AL GGL KPI Q TA II AGGC P LFF V 486
490
....*....|
gi 2105040256 484 MLLMSWGL IK 493
Cdd:PRK03356 487 NIMVTLSF IK 496
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
