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Conserved domains on  [gi|2107272579|ref|WP_225540464|]
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MULTISPECIES: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Empedobacter]

Protein Classification

lysophospholipid acyltransferase family protein( domain architecture ID 11415180)

lysophospholipid acyltransferase (LPLAT) family protein may act as an acyltransferase of a de novo or remodeling pathway of glycerophospholipid biosynthesis, catalyzing the incorporation of an acyl group from either acyl-CoAs or acyl-acyl carrier proteins (acyl-ACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid; 1-acyl-sn-glycerol-3-phosphate acyltransferase, for example, converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at the 2 position by utilizing either acyl-CoA or acyl-ACP as the fatty acyl donor;

CATH:  1.10.1200.50
EC:  2.3.1.-
Gene Ontology:  GO:0008654|GO:0016746
PubMed:  18718904|18931347
SCOP:  4003349

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PlsC COG0204
1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; ...
23-247 4.88e-30

1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; 1-acyl-sn-glycerol-3-phosphate acyltransferase is part of the Pathway/BioSystem: Phospholipid biosynthesis


:

Pssm-ID: 439974 [Multi-domain]  Cd Length: 215  Bit Score: 112.80  E-value: 4.88e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  23 RTLIFLLGSftynryngfnKLKVTGTKNLvdlPAQ-NVLFVSNHQTYFaDVFAMYHVFcsvkngfidtiknpiyllnpKI 101
Cdd:COG0204    21 RLLLRLLGV----------RVRVEGLENL---PADgPVLIVANHQSWL-DILLLLAAL--------------------PR 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579 102 DFYYVAAEETMKDNLLTKLFAYTGAVTVKRTwrakgenvNRKVDLSEINNIDIALQSG-WVVTFPQGTTTA---FAPGRR 177
Cdd:COG0204    67 PVRFVAKKELFKIPLLGWLLRALGAIPVDRS--------KRRAALRALRQAVEALKAGeSLVIFPEGTRSPdgrLLPFKT 138
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2107272579 178 GTAHLIKKNKPIVIPVVIDGFRRAFDKKGLrikKRGINATMTFKEPLDI-DYENDSSDAIMQKIMNAIEQA 247
Cdd:COG0204   139 GAARLALEAGVPIVPVAIDGTERALPKGFL---PRPGKVTVRIGPPIDPsDLEGEDRRELAERLRAAIEAL 206
 
Name Accession Description Interval E-value
PlsC COG0204
1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; ...
23-247 4.88e-30

1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; 1-acyl-sn-glycerol-3-phosphate acyltransferase is part of the Pathway/BioSystem: Phospholipid biosynthesis


Pssm-ID: 439974 [Multi-domain]  Cd Length: 215  Bit Score: 112.80  E-value: 4.88e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  23 RTLIFLLGSftynryngfnKLKVTGTKNLvdlPAQ-NVLFVSNHQTYFaDVFAMYHVFcsvkngfidtiknpiyllnpKI 101
Cdd:COG0204    21 RLLLRLLGV----------RVRVEGLENL---PADgPVLIVANHQSWL-DILLLLAAL--------------------PR 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579 102 DFYYVAAEETMKDNLLTKLFAYTGAVTVKRTwrakgenvNRKVDLSEINNIDIALQSG-WVVTFPQGTTTA---FAPGRR 177
Cdd:COG0204    67 PVRFVAKKELFKIPLLGWLLRALGAIPVDRS--------KRRAALRALRQAVEALKAGeSLVIFPEGTRSPdgrLLPFKT 138
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2107272579 178 GTAHLIKKNKPIVIPVVIDGFRRAFDKKGLrikKRGINATMTFKEPLDI-DYENDSSDAIMQKIMNAIEQA 247
Cdd:COG0204   139 GAARLALEAGVPIVPVAIDGTERALPKGFL---PRPGKVTVRIGPPIDPsDLEGEDRRELAERLRAAIEAL 206
LPLAT_AGPAT-like cd07989
Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like; ...
40-241 1.36e-24

Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like; Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.


Pssm-ID: 153251 [Multi-domain]  Cd Length: 184  Bit Score: 97.34  E-value: 1.36e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  40 FNKLKVTGTKNLvdLPAQNVLFVSNHQTYFaDVFAMYHVFcsvkngfidtiknpiyllnpKIDFYYVAAEETMKDNLLTK 119
Cdd:cd07989     9 GVRVRVEGLENL--PPKGPVIIVANHQSYL-DPLVLGAAL--------------------PRPIRFVAKKELFKIPFLGW 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579 120 LFAYTGAVTVKRTwrakgenvNRKVDLSEINNIDIALQSG-WVVTFPQGTTTA---FAPGRRGTAHLIKKNKPIVIPVVI 195
Cdd:cd07989    66 LLRLLGAIPIDRG--------NGRSAREALREAIEALKEGeSVVIFPEGTRSRdgeLLPFKSGAFRLAKEAGVPIVPVAI 137
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 2107272579 196 DGFRRAFDKKGLRIKKRgiNATMTFKEPLDID---YENDSSDAIMQKIM 241
Cdd:cd07989   138 SGTWGSLPKGKKLPRPG--RVTVRIGEPIPPEgleLAEEDRKELREKVR 184
PlsC smart00563
Phosphate acyltransferases; Function in phospholipid biosynthesis and have either ...
59-198 6.24e-13

Phosphate acyltransferases; Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.


Pssm-ID: 214724 [Multi-domain]  Cd Length: 118  Bit Score: 64.30  E-value: 6.24e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579   59 VLFVSNHQTYFaDVFAMyhvfcsvkngfidtiknPIYLLNPKIDFYYVAAEETMKDNLLTKLFAYTGAVTVKRTWRAKG- 137
Cdd:smart00563   1 ALVVANHQSFL-DPLVL-----------------SALLPRKLGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRSNGRKAr 62
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2107272579  138 ENVNRKVDLSEinnidialQSGWVVTFPQGTTT---AFAPGRRGTAHLIKKNKPIVIPVVIDGF 198
Cdd:smart00563  63 AALREAVELLK--------EGEWLLIFPEGTRSrpgKLLPFKKGAARLALEAGVPIVPVAIRGT 118
Acyltransferase pfam01553
Acyltransferase; This family contains acyltransferases involved in phospholipid biosynthesis ...
42-195 1.73e-08

Acyltransferase; This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin, the Barth syndrome gene.


Pssm-ID: 366704 [Multi-domain]  Cd Length: 131  Bit Score: 52.28  E-value: 1.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  42 KLKVTGTKNLVdlPAQNVLFVSNHQTYfADVFAMYHVFcsvkngfidtiknpiYLLNPkiDFYYVAAEETMKDNLLTKLF 121
Cdd:pfam01553   1 RIEVHGLENLP--RGGPAIVVANHQSY-LDVLLLSLAL---------------YKRGR--PLVFVAKKELFDIPLVGWLM 60
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2107272579 122 AYTGAVTVKRTWRAKGENV-NRKVDLSEinnidialQSGWVVTFPQGT---TTAFAPGRRGTAHLIKKNKPIVIPVVI 195
Cdd:pfam01553  61 RLLGCIFIDRKNRKDAAGTlEYLVELLR--------EGKLVVIFPEGTrsrEGELLPFKKGAFRLAIEAGVPIVPVAI 130
 
Name Accession Description Interval E-value
PlsC COG0204
1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; ...
23-247 4.88e-30

1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]; 1-acyl-sn-glycerol-3-phosphate acyltransferase is part of the Pathway/BioSystem: Phospholipid biosynthesis


Pssm-ID: 439974 [Multi-domain]  Cd Length: 215  Bit Score: 112.80  E-value: 4.88e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  23 RTLIFLLGSftynryngfnKLKVTGTKNLvdlPAQ-NVLFVSNHQTYFaDVFAMYHVFcsvkngfidtiknpiyllnpKI 101
Cdd:COG0204    21 RLLLRLLGV----------RVRVEGLENL---PADgPVLIVANHQSWL-DILLLLAAL--------------------PR 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579 102 DFYYVAAEETMKDNLLTKLFAYTGAVTVKRTwrakgenvNRKVDLSEINNIDIALQSG-WVVTFPQGTTTA---FAPGRR 177
Cdd:COG0204    67 PVRFVAKKELFKIPLLGWLLRALGAIPVDRS--------KRRAALRALRQAVEALKAGeSLVIFPEGTRSPdgrLLPFKT 138
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2107272579 178 GTAHLIKKNKPIVIPVVIDGFRRAFDKKGLrikKRGINATMTFKEPLDI-DYENDSSDAIMQKIMNAIEQA 247
Cdd:COG0204   139 GAARLALEAGVPIVPVAIDGTERALPKGFL---PRPGKVTVRIGPPIDPsDLEGEDRRELAERLRAAIEAL 206
LPLAT_AGPAT-like cd07989
Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like; ...
40-241 1.36e-24

Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like; Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.


Pssm-ID: 153251 [Multi-domain]  Cd Length: 184  Bit Score: 97.34  E-value: 1.36e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  40 FNKLKVTGTKNLvdLPAQNVLFVSNHQTYFaDVFAMYHVFcsvkngfidtiknpiyllnpKIDFYYVAAEETMKDNLLTK 119
Cdd:cd07989     9 GVRVRVEGLENL--PPKGPVIIVANHQSYL-DPLVLGAAL--------------------PRPIRFVAKKELFKIPFLGW 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579 120 LFAYTGAVTVKRTwrakgenvNRKVDLSEINNIDIALQSG-WVVTFPQGTTTA---FAPGRRGTAHLIKKNKPIVIPVVI 195
Cdd:cd07989    66 LLRLLGAIPIDRG--------NGRSAREALREAIEALKEGeSVVIFPEGTRSRdgeLLPFKSGAFRLAKEAGVPIVPVAI 137
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 2107272579 196 DGFRRAFDKKGLRIKKRgiNATMTFKEPLDID---YENDSSDAIMQKIM 241
Cdd:cd07989   138 SGTWGSLPKGKKLPRPG--RVTVRIGEPIPPEgleLAEEDRKELREKVR 184
PlsC smart00563
Phosphate acyltransferases; Function in phospholipid biosynthesis and have either ...
59-198 6.24e-13

Phosphate acyltransferases; Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family.


Pssm-ID: 214724 [Multi-domain]  Cd Length: 118  Bit Score: 64.30  E-value: 6.24e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579   59 VLFVSNHQTYFaDVFAMyhvfcsvkngfidtiknPIYLLNPKIDFYYVAAEETMKDNLLTKLFAYTGAVTVKRTWRAKG- 137
Cdd:smart00563   1 ALVVANHQSFL-DPLVL-----------------SALLPRKLGRVRFVAKKELFYVPLLGWLLRLLGAIFIDRSNGRKAr 62
                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2107272579  138 ENVNRKVDLSEinnidialQSGWVVTFPQGTTT---AFAPGRRGTAHLIKKNKPIVIPVVIDGF 198
Cdd:smart00563  63 AALREAVELLK--------EGEWLLIFPEGTRSrpgKLLPFKKGAARLALEAGVPIVPVAIRGT 118
Acyltransferase pfam01553
Acyltransferase; This family contains acyltransferases involved in phospholipid biosynthesis ...
42-195 1.73e-08

Acyltransferase; This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function. This family also includes tafazzin, the Barth syndrome gene.


Pssm-ID: 366704 [Multi-domain]  Cd Length: 131  Bit Score: 52.28  E-value: 1.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  42 KLKVTGTKNLVdlPAQNVLFVSNHQTYfADVFAMYHVFcsvkngfidtiknpiYLLNPkiDFYYVAAEETMKDNLLTKLF 121
Cdd:pfam01553   1 RIEVHGLENLP--RGGPAIVVANHQSY-LDVLLLSLAL---------------YKRGR--PLVFVAKKELFDIPLVGWLM 60
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2107272579 122 AYTGAVTVKRTWRAKGENV-NRKVDLSEinnidialQSGWVVTFPQGT---TTAFAPGRRGTAHLIKKNKPIVIPVVI 195
Cdd:pfam01553  61 RLLGCIFIDRKNRKDAAGTlEYLVELLR--------EGKLVVIFPEGTrsrEGELLPFKKGAFRLAIEAGVPIVPVAI 130
LPLAT cd06551
Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis; ...
36-226 2.14e-08

Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis; Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and Tafazzin (the protein product of the Barth syndrome (TAZ) gene).


Pssm-ID: 153244 [Multi-domain]  Cd Length: 187  Bit Score: 53.19  E-value: 2.14e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  36 RYNGFNKLKVTGTKNLVDLPAqnVLFVSNHQTYFaDVFAMYHvfcsvkngfidtiknpIYLLNPKIDFYYVAAEE-TMKD 114
Cdd:cd06551     7 NFFGFVRLEVKGPPPPPGGGP--VLFVSNHSSWW-DGLILFL----------------LLERGLRRDVYGLMDEElLERY 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579 115 NLLTKLfaytGAVTVKRTWRAkgenvNRKVDLSEINNIdIALQSGWVVTFPQGTTTAFAPG----RRGTAHLIKKNKPIV 190
Cdd:cd06551    68 PFFTRL----GAFSVDRDSPR-----SAAKSLKYVARL-LSKPGSVVWIFPEGTRTRRDKRplqfKPGVAHLAEKAGVPI 137
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 2107272579 191 IPVVIDGFRRAFDKKGlrikkrgiNATMTFKEPLDI 226
Cdd:cd06551   138 VPVALRYTFELFEQFP--------EIFVRIGPPIPY 165
LPLAT_AAK14816-like cd07992
Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ...
40-246 4.77e-05

Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like; Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins.


Pssm-ID: 153254 [Multi-domain]  Cd Length: 203  Bit Score: 43.40  E-value: 4.77e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  40 FNKLKVTGTKNLvdlPAQN-VLFVSNHQTYFADVFaMYHVfcsvkngfidTIKNPIyllnpkidfYYVAAEETMKDNLLT 118
Cdd:cd07992    13 FRRITVVGRENV---PKDGpVIFLGNHPNALIDPL-LLAA----------TLRRPV---------RFLAKADLFKNPLIG 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579 119 KLFAYTGAVTVKrtwRAKGENVNRKvdlSEINNIDI------ALQSG-WVVTFPQGTT---TAFAPGRRGTAHLIKknkp 188
Cdd:cd07992    70 WLLESFGAIPVY---RPKDLARGGI---GKISNAAVfdavgeALKAGgAIGIFPEGGShdrPRLLPLKAGAARMAL---- 139
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579 189 ivipvvidGFRRAfDKKGLRIKKRGIN----------ATMTFKEPLDID--YENDSSDAIMQKIMNAIEQ 246
Cdd:cd07992   140 --------EALEA-GQKDVKIVPVGLNyedksrfrsrVLVEFGKPISVSafEEAEASRDVEKKLINQLEA 200
LPLAT_LPCAT1-like cd07991
Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like; ...
23-175 2.20e-03

Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like; Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences.


Pssm-ID: 153253 [Multi-domain]  Cd Length: 211  Bit Score: 38.36  E-value: 2.20e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579  23 RTLIFLLGSFtYNRYNGfnklkvtgtknLVDLPAQNVLFVSNHQTYFaDVFA-MYHVFCSVkngfidtiknpiyllnpki 101
Cdd:cd07991     2 RVLLFAFGFY-VIKVHG-----------KPDPPEAPRIIVANHTSFI-DPLIlFSDLFPSI------------------- 49
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2107272579 102 dfyyVAAEETMKDNLLTKLFAYTGAVTVKRTwrakgENVNRKVDLSEInnIDIALQSGW--VVTFPQGTTT--------- 170
Cdd:cd07991    50 ----VAKKELGKLPFIGTILRALGCIFVDRS-----EPKDRKKVVEEI--KERATDPNWppILIFPEGTTTngkalimfk 118

                  ....*..
gi 2107272579 171 --AFAPG 175
Cdd:cd07991   119 kgAFEPG 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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