|
Name |
Accession |
Description |
Interval |
E-value |
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
93-853 |
5.66e-149 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 454.35 E-value: 5.66e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 93 LRQALSGSNLAYSLRGQVA---TVRQQEVAQLMPVTVSGDNLPA--YIADTpTSIATKTSLPPRQTPFTINQASQELIME 167
Cdd:COG4773 1 AAALLAGSGLAAAAAGALAqaaAAAAAEATTLPEVTVTGTAEGTggYTAKS-SSTATKLDTPLRETPQSVSVVTRQLIED 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 168 RGDANIYDTLEGFAGVTTTSGNGDIGQSmsrsINVRGFSTGGagqLLINGQRTYSSASAARSPDSLERVELLRGPAALYY 247
Cdd:COG4773 80 QGATTLDDALRNVPGVTVSSYDGGGRDS----FSIRGFSIDN---YLRDGLPLGGFGGGQPDTANLERVEVLKGPAGLLY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 248 GAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPLNQDDTLLYRLVGSYTHTVDDQDHIFQEPKSVLAALT 327
Cdd:COG4773 153 GAGSPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLD 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 328 YAPSSRFDTTLTYERmemeavpeQENNMRISNRNSPYYGQYYPVPRDFFWGSLNDRAVTETDTLLWDARWRPSERFNLNA 407
Cdd:COG4773 233 WDLTDDTTLTLGAEY--------QDDDSTGDRGFLPLDGTLLDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRA 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 408 YANYQESKQWWQNTRVNGAGNgpDADGNVQRYVSGRQARDRNWSFGLDLSGKAYTGAFRHDWLTGAGYGHTQTRSSGrqv 487
Cdd:COG4773 305 NARYSDSDRDGRSAYAYGAPD--AATGTLTRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDS--- 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 488 aadsrpgqpYTPGPLNIFDPDYGNWHYQDRiweDPLAAATKRNDLNLYFQNMLHLPDeKTRLLLAMGWAQFDS----RPP 563
Cdd:COG4773 380 ---------ATAGTINIYNPVYGNLPEPDF---DASDTDTTTRQTGLYAQDQISLTD-RLSLLLGGRYDWYETdstnRLG 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 564 DNAQRNKISKWSPRIALMHDLTPSTTVYASYGESFYPNelNLLDMSGSYItKPQEGKQYEIGFKQDLFDSRAMLTAALFR 643
Cdd:COG4773 447 GSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQ--SGADNNGNPL-DPETGKQYEAGVKGELFDGRLNATLAVFD 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 644 IDKKNMPmsaqpdgqcdplaapapgtpgTTDGSGDCRTSLSGLERSQGLELELSGLITDWWAASLSYAYLKTEYVDTeDP 723
Cdd:COG4773 524 ITQKNVA---------------------TTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKD-AD 581
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 724 FSQGRSKPNMPAHNLALWNKFRVYQDPVYGTAhVAVGLRawskshnawrdpAVGTYYNPYSRTDYNPGYGIVDVGVFYan 803
Cdd:COG4773 582 ALEGKRLTNVPRHTASLWTTYRFPSGALKGLG-LGGGVR------------YVGERYGDAANTFTLPSYTLVDAGARY-- 646
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 2108911506 804 tlANGMDLKLQLNIKNLFNKTYYdrNRFANGTTIVWGNERRAMLNAQLSF 853
Cdd:COG4773 647 --DLGKNWTLQLNVNNLFDKKYY--ASSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
153-853 |
1.23e-65 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 231.92 E-value: 1.23e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 153 TPFTINQASQELIMERGDANIYDTLEGFAGVTTTSGNGdigqSMSR-SINVRGFS-TGGAGQLLINGQRTYS-SASAARS 229
Cdd:TIGR01783 2 IPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGG----TTQFgNITIRGFGlEVDIDNVYLDGVPLLSrGNLAIVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 230 PDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPLNQDDTLLYRLVGSYTHTV 309
Cdd:TIGR01783 78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 310 DDQDHIFQEPKSVLAALTYAPSSR----FDTTLTYERM--EMEAVPeqennmrISNRNSPyygqyYPVPRDFFWGSLNDR 383
Cdd:TIGR01783 158 SFYDGAGEETRLGATATDWQLDDRtllrLGAYYQKERDrgGYGGLP-------ASGGTSG-----RDLSSDRYLGTSSNR 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 384 AVTETDTLlwDARWRPSERFNLNAYA-NYQESKQWWQNTRVNGAGNGPDADGNVQRYVSGRQARDRNWSFGLDLSGKAYT 462
Cdd:TIGR01783 226 NYDDREYL--SYGLSLEYQFNDVWTGkQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQDRVQIDAGLDGEFET 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 463 GAFRHDWLTGAGYGHTQTR--SSGRQVAADSRPGQPYTPGplnifDPDYGNwhyqdrIWEDPlAAATKRNDLNLYFQNML 540
Cdd:TIGR01783 304 GPIEHDLLLGVSYGQRTTNrfNNTGYPSDNIYSLTATSSA-----RTDIGD------SPKDR-ALSSTTKALNGVALQRI 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 541 HLPDeKTRLLLAM--GWAQFDSRPPDNAQ--RNKISKWSPRIALMHDLTPSTTVYASYGESFYPNELNLLDM-SGSYITK 615
Cdd:TIGR01783 372 LLAD-KWTLTLGGryDSVDVKSNNGVAGStgKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAgNSGDILE 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 616 PQEGKQYEIGFKQDLFDSRAMlTAALFRIDKKNMPMSAQPDGQcdpLAAPApgtpgttdgsgdcrtslsGLERSQGLELE 695
Cdd:TIGR01783 451 PEKGKNYELGVRYDLGDSLLA-TAALFRITKDNQLVQDPVNGT---FSVNA------------------GKTRNRGVELE 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 696 LSGLITDWWAASLSYAYLKTEYVDTEDPFSQGRSKPNMPAHNLALWNKFRVYQDPvygtahvavglrawskshNAWRDPA 775
Cdd:TIGR01783 509 ARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTVPFVPKHTASLWASYAPPVGD------------------NGLTLGG 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 776 VGTYYNPYSRTDYN----PGYGIVDVGVFYanTLANGMDLKLQLNIKNLFNKTYYDR-NRFANGTTIVWGNERRAMLNAQ 850
Cdd:TIGR01783 571 GVQYTGKAYVDGGNtgkvPSYTVVDLSVRY--DLTKKKNLTLALNVNNLFDRDYYTSgYRWGPSAYIYPGAPRTVGLSVS 648
|
...
gi 2108911506 851 LSF 853
Cdd:TIGR01783 649 YDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
161-853 |
1.85e-59 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 214.24 E-value: 1.85e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 161 SQELIMERGDANIYDTLEGFAGVTTTSGNGDIGQSmsrsINVRGFSTGGAGQLlINGQRTYSSASAAR------SPDSLE 234
Cdd:cd01347 6 TAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGST----ISIRGFGPDRTLVL-VDGLPLASSNYGRGvdlntiPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 235 RVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSM---VDMTGPLNQDDTLLYRLVGSYTHTVDD 311
Cdd:cd01347 81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGgggFDVSGALADDGAFGARLYGAYRDGDGT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 312 Q------DHIFQEPKSVLAALTYAPSS--RFDTTLTYERmemeavpeQENNMRISNRNSPYYGQYYPVPRDFFWGSLNDR 383
Cdd:cd01347 161 IdgdgqaDDSDEERYNVAGKLDWRPDDdtRLTLDAGYQD--------QDADGPGGTLPANGTGSSLGGGPSSNTNGDRDW 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 384 AVTETDTLLWDARWRPSERFN---LNAYANYQESKQWWQNTRVNGAGNGPDADGNVQRYVSGRQarDRNWSFGLDLSGKA 460
Cdd:cd01347 233 DYRDRYRKRASLGLEHDLNDTgwtLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERD--TTQLGFDAGLNAPF 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 461 YTGAFRHDWLTGAGYghTQTRSSGRQVAAdsrpgqpytpgplnifdpdYGnwhyQDRIwedplaaatkrnDLNLYFQNML 540
Cdd:cd01347 311 GTGPVAHTLTLGVEY--RREELDEKQTAL-------------------YA----QDTI------------ELTDDLTLTL 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 541 HLPDEKTRLllamgwAQFDSRPPDNAQRNKISKWSPRIALMHDLTPSTTVYASYGESFYPNELNLLDMSGSYIT------ 614
Cdd:cd01347 354 GLRYDHYDQ------DSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGtaavgn 427
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 615 ---KPQEGKQYEIGFKQDlFDSRAMLTAALFRIDKKNMPMSaqpdgqcdplaapapgTPGTTDGSGDCRTSLSGLERSQG 691
Cdd:cd01347 428 pnlKPEKSKQYELGLKYD-PGDGLTLSAALFRIDIKNEIVS----------------TPTNTGLGLVTVYVNGGKARIRG 490
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 692 LELELSGLITDWWAASLSYAYLKTEYVDTeDPFSQGRSKPNMPAHNLALWNKfrvYQDPVYGTAhVAVGLRAWSKShnaW 771
Cdd:cd01347 491 VELEASYDLTDGLGLTGSYTYTDTEVKRT-DGATTGNRLPGIPKHTANLGLD---YELPDEGLT-AGGGVRYRGKQ---Y 562
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 772 RDpavgtyYNPYSRTDYNPGYGIVDVGVFYANTlangMDLKLQLNIKNLFNKTYYDRNRFA-NGTTIVWGNERRAMLNAQ 850
Cdd:cd01347 563 AD------TANGNNTVKVPGYTLVDLSASYQFT----KNLTLRLGVNNLFDKDYYTSLSVRgSGLYGYYGPGRTYYLSVS 632
|
...
gi 2108911506 851 LSF 853
Cdd:cd01347 633 YKF 635
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
93-825 |
1.25e-37 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 151.11 E-value: 1.25e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 93 LRQALSGSNLAYSLRGQVA--------TVRQQEVA--QLMPVTVSGDNLPAYIADTP--------TSIATKTSLPPRQTP 154
Cdd:PRK14050 1 MMCRSRGLHFMMLLAAGVAlaalvlsgLVAAQEGNttQLETIVVEGGNAASATATGPvdgyvakaTATGSKTDTPITEIP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 155 FTINQASQELIMERGDANIYD-TLEGFAGVTT----TSGNGDIgqsmsrsINVRGFSTGGAGqLLINGQRTYSSASAARS 229
Cdd:PRK14050 81 QSVSVVGRQEMDDRGVTNKVDeALRYTPGVLSqpfgTDGDTDW-------FYIRGFDATQTG-VFLDGLNLFSYGFGGFQ 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 230 PDS--LERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPLNQDDTLLYRLVGSYT- 306
Cdd:PRK14050 153 IDPfmLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAg 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 307 -HTVDDQDHIFQepKSVLAALTYAPSSRfdTTLTyermeMEAVPEQENNMRISNRNSPYYGQYYPVP-----RDFFWGSL 380
Cdd:PRK14050 233 gDNYSDYSEDLR--GFIMPQITYAPDDA--TSLT-----VYGYLSGLDQVHVGNGFLPYVGTVVDAPfgkidRDAFYGEP 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 381 NDRAVTETDTLL-------WDARWRpserFNLNA-YAN-YQESKQWWQNTRVNGAGNGPD---ADGNVQRYvsGRQARDR 448
Cdd:PRK14050 304 DIDNGSYAQQMLgyefsheFDNGWT----FSQNArYGHlHKHEKGPYTYGYVGGATGLPDptgPDYMLNRI--GFEHRSK 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 449 NWSFGLD--LSGKAYTGAFRHDWLTGAGYGHTQTRssgrQVAADSrpgqpyTPGPLNIFDPDYG-----NWHYQDRIwed 521
Cdd:PRK14050 378 VDSFSIDnrLEGEFDTGALTHNLLFGLDYKYYRLD----QVQACC------GATPISATNPVYGttqgaNFVYLDQI--- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 522 plaaaTKRNDLNLYFQNMLHLPDektrlllamGW------------AQFDSRPPDNAQRNKiSKWSPRIALMHDLTPSTT 589
Cdd:PRK14050 445 -----LTQQQIGIYAQDQIRFGD---------GWlvtlngrydyvdTDSDARIGTSYESND-GALSGRAGLAYEFDNGLT 509
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 590 VYASYGESFYPnelnLLD--MSGSYItKPQEGKQYEIGFK--QDLFDsrAMLTAALFRIDKKNMPMsaqpdgqcdplaap 665
Cdd:PRK14050 510 PYVSAATFFNP----LVGtlASGPPL-KPEEGEQYEAGIKyePSFID--GLITASVFQITKKNVTV-------------- 568
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 666 apgtpgtTDGSGDCRTSLsGLERSQGLELELSGLITDWWAASLSYAYLKTEYVDTEDPFSQGRSKPNMPAHNLALWNKFR 745
Cdd:PRK14050 569 -------TDPLTFASTQL-GEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDANPSLIGNSPYLVPETQASLWLDYA 640
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 746 VYQDPVYGTAhVAVGLRAWSKShnaWRDpavgtyynpYSRTDYNPGYGIVDVGVFYANTlangmDLKLQLNIKNLFNKTY 825
Cdd:PRK14050 641 VTDGAFEGVS-LGAGVRYQGES---WAD---------EANTLKVPAATLFDAAIRYEKN-----DWGASLNVANLFDKEY 702
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
359-852 |
2.19e-30 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 126.04 E-value: 2.19e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 359 NRNSPYYGQYYPVPRDFFWGSLNDRAVTETDTL-------LWDARWRPSERFNLNAYANYQESKQWWQNTRVNG--AGNG 429
Cdd:pfam00593 12 DTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLgdrplyyGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLrySSLD 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 430 PDADGNVQRYVSGRQARDRNWSFGLDLSGKAYTGAFRHDWLTGAGYGHTQTRSSGRQvaadsrpgqpYTPGPLNIFDPDY 509
Cdd:pfam00593 92 GDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRR----------LDDDAYDPYDPAN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 510 GNwhyqdriweDPLAAATKRNDLNLYFQNMLHLPDektRLLLAMG----WAQFDS---RPPDNAQRNKISKWSPRIALMH 582
Cdd:pfam00593 162 PS---------SSSYSDTTTDSYGLYLQDNIKLTD---RLTLTLGlrydHYSTDGddgNGGGDNFSRSYSAFSPRLGLVY 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 583 DLTPSTTVYASYGESF---YPNELNLLDMSGSYIT--------KPQEGKQYEIGFKqdLFDSRAMLTAALFRIDKKNMPM 651
Cdd:pfam00593 230 KPTDNLSLYASYSRGFrapSLGELYGSGSGGGGGAvaggnpdlKPETSDNYELGLK--YDDGRLSLSLALFYIDIKNLIT 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 652 SaQPDGQCDPLAAPAPGTPGTTdgsgdcrtslsgleRSQGLELELSGLITDWWAASLSYAYLKTEyvDTEDPFSQGRSKP 731
Cdd:pfam00593 308 S-DPDGPGLGGTVYTYTNVGKA--------------RIRGVELELSGRLWGLGLSGGGYTYTDAD--DDADADDTGNPLP 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 732 NMPAHNLALWNKFRVYQDPvygtahvavglraWSKSHNAWRDPAVGTYYNPYSRTDYNPGYGIVDVGVFYANTlangMDL 811
Cdd:pfam00593 371 NVPRHTANLGLTYDFPLGG-------------WGARLGARYVGSGERRYGDAANTFKTPGYTLVDLSAGYRLN----KNL 433
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 2108911506 812 KLQLNIKNLFNKTY-YDRNRFANGTTIVWGNERRAMLNAQLS 852
Cdd:pfam00593 434 TLRLGVNNLFDKYYkRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| STN |
smart00965 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
66-108 |
9.78e-07 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 198033 [Multi-domain] Cd Length: 52 Bit Score: 46.34 E-value: 9.78e-07
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2108911506 66 LSIAFDPRQVEHFQAPAIRGVMTSEQALRQALSGSNLAYSLRG 108
Cdd:smart00965 1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGLTYRRIG 43
|
|
| STN |
pfam07660 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
67-116 |
6.17e-06 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 429580 [Multi-domain] Cd Length: 51 Bit Score: 44.04 E-value: 6.17e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2108911506 67 SIAFDPRQVEHFQAPAIR-GVMTSEQALRQALSGSNLAYSLRGQVATVRQQ 116
Cdd:pfam07660 1 SILYDSDLVDGKQSVSLNvGNVTLEEALDQLLAGTGLSYEIGGNTIVLRPK 51
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
93-853 |
5.66e-149 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 454.35 E-value: 5.66e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 93 LRQALSGSNLAYSLRGQVA---TVRQQEVAQLMPVTVSGDNLPA--YIADTpTSIATKTSLPPRQTPFTINQASQELIME 167
Cdd:COG4773 1 AAALLAGSGLAAAAAGALAqaaAAAAAEATTLPEVTVTGTAEGTggYTAKS-SSTATKLDTPLRETPQSVSVVTRQLIED 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 168 RGDANIYDTLEGFAGVTTTSGNGDIGQSmsrsINVRGFSTGGagqLLINGQRTYSSASAARSPDSLERVELLRGPAALYY 247
Cdd:COG4773 80 QGATTLDDALRNVPGVTVSSYDGGGRDS----FSIRGFSIDN---YLRDGLPLGGFGGGQPDTANLERVEVLKGPAGLLY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 248 GAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPLNQDDTLLYRLVGSYTHTVDDQDHIFQEPKSVLAALT 327
Cdd:COG4773 153 GAGSPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLD 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 328 YAPSSRFDTTLTYERmemeavpeQENNMRISNRNSPYYGQYYPVPRDFFWGSLNDRAVTETDTLLWDARWRPSERFNLNA 407
Cdd:COG4773 233 WDLTDDTTLTLGAEY--------QDDDSTGDRGFLPLDGTLLDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRA 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 408 YANYQESKQWWQNTRVNGAGNgpDADGNVQRYVSGRQARDRNWSFGLDLSGKAYTGAFRHDWLTGAGYGHTQTRSSGrqv 487
Cdd:COG4773 305 NARYSDSDRDGRSAYAYGAPD--AATGTLTRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDS--- 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 488 aadsrpgqpYTPGPLNIFDPDYGNWHYQDRiweDPLAAATKRNDLNLYFQNMLHLPDeKTRLLLAMGWAQFDS----RPP 563
Cdd:COG4773 380 ---------ATAGTINIYNPVYGNLPEPDF---DASDTDTTTRQTGLYAQDQISLTD-RLSLLLGGRYDWYETdstnRLG 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 564 DNAQRNKISKWSPRIALMHDLTPSTTVYASYGESFYPNelNLLDMSGSYItKPQEGKQYEIGFKQDLFDSRAMLTAALFR 643
Cdd:COG4773 447 GSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQ--SGADNNGNPL-DPETGKQYEAGVKGELFDGRLNATLAVFD 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 644 IDKKNMPmsaqpdgqcdplaapapgtpgTTDGSGDCRTSLSGLERSQGLELELSGLITDWWAASLSYAYLKTEYVDTeDP 723
Cdd:COG4773 524 ITQKNVA---------------------TTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKD-AD 581
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 724 FSQGRSKPNMPAHNLALWNKFRVYQDPVYGTAhVAVGLRawskshnawrdpAVGTYYNPYSRTDYNPGYGIVDVGVFYan 803
Cdd:COG4773 582 ALEGKRLTNVPRHTASLWTTYRFPSGALKGLG-LGGGVR------------YVGERYGDAANTFTLPSYTLVDAGARY-- 646
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 2108911506 804 tlANGMDLKLQLNIKNLFNKTYYdrNRFANGTTIVWGNERRAMLNAQLSF 853
Cdd:COG4773 647 --DLGKNWTLQLNVNNLFDKKYY--ASSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
145-853 |
3.57e-131 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 406.19 E-value: 3.57e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 145 KTSLPPRQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTSGNGDIGQSmsrsINVRGFSTGGAgqLLINGQRTYSSA 224
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDS----FSIRGFSASGD--IYVDGLRDPGQY 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 225 SaaRSPDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPLNqdDTLLYRLVGS 304
Cdd:COG4774 75 R--RDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLG--DDLAYRLNGM 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 305 YTHTVDDQDHIFQEPKSVLAALTYAPSSRFDTTLTYERMEMEAVPeqennmrisNRNSPYY--GQYYPVPRDFFWGSLND 382
Cdd:COG4774 151 YRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTP---------DYGVPAVanGRPVDVDRSTFYGQPDD 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 383 RAVTETDTLLWDARWRPSERFNLNAYANYQESKQWWQNTRVNGAgngpDADGNVQRYVSGRQARDRNWSFGLDLSGKAYT 462
Cdd:COG4774 222 YSDSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGG----NATGTVTRSAYRRDQDNDTLSNQTDLTGKFDT 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 463 GAFRHDWLTGAGYGHTQTRSSGRQVAAdsrpgqpyTPGPLNIFDPDYGNWhyqdrIWEDPLAAATKRNDLN---LYFQNM 539
Cdd:COG4774 298 GGVKHTLLAGVEYSREDSDNARYSGGG--------TAPTVNLYNPVYGAP-----VTGPTLGGADNDSRTDttgLYLQDT 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 540 LHLpDEKTRLLLAMGWAQFDSR-----PPDNAQRNKISKWSPRIALMHDLTPSTTVYASYGESFYPN-ELNLLDMSGSyI 613
Cdd:COG4774 365 ISL-TDRWSLLAGLRYDRFDTDytdrtTGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGgGAPSLSNAGQ-A 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 614 TKPQEGKQYEIGFKQDLFDSRAMLTAALFRIDKKNMPmsaqpdgqcdplaapapgtpgTTDGSGDCRTSLSGLERSQGLE 693
Cdd:COG4774 443 LDPEKSRQYEVGVKWDLLDGRLSLTAALFRIEKTNVR---------------------TTDPANPGVYVQTGEQRSRGVE 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 694 LELSGLITDWWAASLSYAYLKTEYVDTEDPFSQGRSKPNMPAHNLALWNKfrvYQDPVYGtahVAVGLRAWskshnawrd 773
Cdd:COG4774 502 LEATGELTPGWSVLAGYTYLDAEITKSANAANVGNRLPNVPRHSASLWTT---YDLPLPG---LTLGGGVR--------- 566
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 774 pAVGTYYNPYSRTDYNPGYGIVDVGVFYANTLangmDLKLQLNIKNLFNKTYYDRNRfaNGTTIVWGNERRAMLNAQLSF 853
Cdd:COG4774 567 -YVGSRYADAANTVKLPSYTRFDAGASYRLNK----NLTLRLNVNNLTDKRYYASAY--GSGYVTPGAPRTVLLSASYRF 639
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
142-836 |
4.12e-70 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 243.97 E-value: 4.12e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 142 IATKTSLPPRQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTSGNGDIGQsmsrsINVRGFSTGGAG-QLLINGQRT 220
Cdd:COG1629 7 TATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQ-----ISIRGFGGGGNRvLVLVDGVPL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 221 YSSASAAR-----SPDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPlnqDD 295
Cdd:COG1629 82 NDPSGGDGglsyiDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLSGG---NG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 296 TLLYRLVGSYTHTVDDQDHIFQEPKSVLAALTYAPSSRFDTTLTYErmemeavpeqennmrisnrnspYYGQYYPVPRDF 375
Cdd:COG1629 159 KLAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSAS----------------------YSDSDQDSPGYL 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 376 FWGSLNDRAVTETDTLLWDARWRPSERFNLNAYANYQESKQWWQ---NTRVNGAGNGPDADGNVQRYVSG--RQARDRNW 450
Cdd:COG1629 217 TLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLSLEYEHLGDGLKlsaSAYYRYDDTDLDSDFTPTPADGGtlEQTDFDNR 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 451 SFGLDLSGkAYTGAFRHDWLTGAGYGHTQTRSSGRQVAADSRPGQPYTPGPLNIFDpdygnwhyqdriwedplaaaTKRN 530
Cdd:COG1629 297 TYGLELRL-TYDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADDD--------------------GTTT 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 531 DLNLYFQNMLHLPDektRLLLAMG----WAQFDSRPPDNAQRNKI-----SKWSPRIALMHDLTPSTTVYASYGESFYPN 601
Cdd:COG1629 356 SLALYAQDTYKLTD---KLTLTAGlrydYVSYDVDDTVTGTDSASgsrsySAFSPSLGLTYQLSPNLSLYASYSRGFRAP 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 602 ELNLLDMSGSYIT-------KPQEGKQYEIGFKQDLFDSRAMLTAALFRIDKKNMPMSAQpdgqcdplAAPAPGTPGTTD 674
Cdd:COG1629 433 TFGELYANGTDPYsvgnpdlKPETSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILSVP--------LPNDSGFSTYYT 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 675 GSGDcrtslsglERSQGLELELSGLITDWWAASLSYAYLKTEYVDTED--PFSQGRSKPNMPAHNLALWNKFRvYQDPVY 752
Cdd:COG1629 505 NAGK--------ARSYGVELELSYQLTPGLSLNASYSYTDAKFDDDTDgsADLDGNRLPGVPPLTANLGLTYE-FPGGWS 575
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 753 gtahVAVGLRAWSKshnawrdpavgTYYNPYSRTDYNPGYGIVDVGVFYantlANGMDLKLQLNIKNLFNKTYYDRNRFA 832
Cdd:COG1629 576 ----LGLGVRYVGD-----------RYLDDANTQGAPGGYTLVDLGAGY----RFGDNLTLSLGVDNLFDKKYATSLSVR 636
|
....
gi 2108911506 833 NGTT 836
Cdd:COG1629 637 ASNV 640
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
153-853 |
1.23e-65 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 231.92 E-value: 1.23e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 153 TPFTINQASQELIMERGDANIYDTLEGFAGVTTTSGNGdigqSMSR-SINVRGFS-TGGAGQLLINGQRTYS-SASAARS 229
Cdd:TIGR01783 2 IPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGG----TTQFgNITIRGFGlEVDIDNVYLDGVPLLSrGNLAIVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 230 PDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPLNQDDTLLYRLVGSYTHTV 309
Cdd:TIGR01783 78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 310 DDQDHIFQEPKSVLAALTYAPSSR----FDTTLTYERM--EMEAVPeqennmrISNRNSPyygqyYPVPRDFFWGSLNDR 383
Cdd:TIGR01783 158 SFYDGAGEETRLGATATDWQLDDRtllrLGAYYQKERDrgGYGGLP-------ASGGTSG-----RDLSSDRYLGTSSNR 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 384 AVTETDTLlwDARWRPSERFNLNAYA-NYQESKQWWQNTRVNGAGNGPDADGNVQRYVSGRQARDRNWSFGLDLSGKAYT 462
Cdd:TIGR01783 226 NYDDREYL--SYGLSLEYQFNDVWTGkQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQDRVQIDAGLDGEFET 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 463 GAFRHDWLTGAGYGHTQTR--SSGRQVAADSRPGQPYTPGplnifDPDYGNwhyqdrIWEDPlAAATKRNDLNLYFQNML 540
Cdd:TIGR01783 304 GPIEHDLLLGVSYGQRTTNrfNNTGYPSDNIYSLTATSSA-----RTDIGD------SPKDR-ALSSTTKALNGVALQRI 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 541 HLPDeKTRLLLAM--GWAQFDSRPPDNAQ--RNKISKWSPRIALMHDLTPSTTVYASYGESFYPNELNLLDM-SGSYITK 615
Cdd:TIGR01783 372 LLAD-KWTLTLGGryDSVDVKSNNGVAGStgKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAgNSGDILE 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 616 PQEGKQYEIGFKQDLFDSRAMlTAALFRIDKKNMPMSAQPDGQcdpLAAPApgtpgttdgsgdcrtslsGLERSQGLELE 695
Cdd:TIGR01783 451 PEKGKNYELGVRYDLGDSLLA-TAALFRITKDNQLVQDPVNGT---FSVNA------------------GKTRNRGVELE 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 696 LSGLITDWWAASLSYAYLKTEYVDTEDPFSQGRSKPNMPAHNLALWNKFRVYQDPvygtahvavglrawskshNAWRDPA 775
Cdd:TIGR01783 509 ARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQGNTVPFVPKHTASLWASYAPPVGD------------------NGLTLGG 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 776 VGTYYNPYSRTDYN----PGYGIVDVGVFYanTLANGMDLKLQLNIKNLFNKTYYDR-NRFANGTTIVWGNERRAMLNAQ 850
Cdd:TIGR01783 571 GVQYTGKAYVDGGNtgkvPSYTVVDLSVRY--DLTKKKNLTLALNVNNLFDRDYYTSgYRWGPSAYIYPGAPRTVGLSVS 648
|
...
gi 2108911506 851 LSF 853
Cdd:TIGR01783 649 YDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
161-853 |
1.85e-59 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 214.24 E-value: 1.85e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 161 SQELIMERGDANIYDTLEGFAGVTTTSGNGDIGQSmsrsINVRGFSTGGAGQLlINGQRTYSSASAAR------SPDSLE 234
Cdd:cd01347 6 TAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGST----ISIRGFGPDRTLVL-VDGLPLASSNYGRGvdlntiPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 235 RVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSM---VDMTGPLNQDDTLLYRLVGSYTHTVDD 311
Cdd:cd01347 81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGgggFDVSGALADDGAFGARLYGAYRDGDGT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 312 Q------DHIFQEPKSVLAALTYAPSS--RFDTTLTYERmemeavpeQENNMRISNRNSPYYGQYYPVPRDFFWGSLNDR 383
Cdd:cd01347 161 IdgdgqaDDSDEERYNVAGKLDWRPDDdtRLTLDAGYQD--------QDADGPGGTLPANGTGSSLGGGPSSNTNGDRDW 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 384 AVTETDTLLWDARWRPSERFN---LNAYANYQESKQWWQNTRVNGAGNGPDADGNVQRYVSGRQarDRNWSFGLDLSGKA 460
Cdd:cd01347 233 DYRDRYRKRASLGLEHDLNDTgwtLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERD--TTQLGFDAGLNAPF 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 461 YTGAFRHDWLTGAGYghTQTRSSGRQVAAdsrpgqpytpgplnifdpdYGnwhyQDRIwedplaaatkrnDLNLYFQNML 540
Cdd:cd01347 311 GTGPVAHTLTLGVEY--RREELDEKQTAL-------------------YA----QDTI------------ELTDDLTLTL 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 541 HLPDEKTRLllamgwAQFDSRPPDNAQRNKISKWSPRIALMHDLTPSTTVYASYGESFYPNELNLLDMSGSYIT------ 614
Cdd:cd01347 354 GLRYDHYDQ------DSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGtaavgn 427
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 615 ---KPQEGKQYEIGFKQDlFDSRAMLTAALFRIDKKNMPMSaqpdgqcdplaapapgTPGTTDGSGDCRTSLSGLERSQG 691
Cdd:cd01347 428 pnlKPEKSKQYELGLKYD-PGDGLTLSAALFRIDIKNEIVS----------------TPTNTGLGLVTVYVNGGKARIRG 490
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 692 LELELSGLITDWWAASLSYAYLKTEYVDTeDPFSQGRSKPNMPAHNLALWNKfrvYQDPVYGTAhVAVGLRAWSKShnaW 771
Cdd:cd01347 491 VELEASYDLTDGLGLTGSYTYTDTEVKRT-DGATTGNRLPGIPKHTANLGLD---YELPDEGLT-AGGGVRYRGKQ---Y 562
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 772 RDpavgtyYNPYSRTDYNPGYGIVDVGVFYANTlangMDLKLQLNIKNLFNKTYYDRNRFA-NGTTIVWGNERRAMLNAQ 850
Cdd:cd01347 563 AD------TANGNNTVKVPGYTLVDLSASYQFT----KNLTLRLGVNNLFDKDYYTSLSVRgSGLYGYYGPGRTYYLSVS 632
|
...
gi 2108911506 851 LSF 853
Cdd:cd01347 633 YKF 635
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
102-804 |
5.97e-42 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 162.72 E-value: 5.97e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 102 LAYSLRGQVATVRQQEVAQLMPVTVSgdnlpayiadtptsiATKTSLPPRQTPFTINQASQELIMERGDANIYDTLEGFA 181
Cdd:COG4771 8 LLLALAAQAADALAEDATELEEVVVT---------------ATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLP 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 182 GVTTTSGNGDIGqsmSRSINVRGFSTGGAgQLLINGQRTYSSASAAR------SPDSLERVELLRGPAALYYGAAEPGGI 255
Cdd:COG4771 73 GVSVTRSGGRGG---SSGISIRGLGGDRV-LVLIDGVPVNNPALGGGgdlsyiPPDDIERIEVIRGPASALYGSDAIGGV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 256 VNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMT--GPlnqDDTLLYRLVGSYTH---TVDDQDHIFQEP-----KSVLAA 325
Cdd:COG4771 149 INIITKKPTDELEGSVSLGYGSNGNGTYSGSLSlgGP---GDKLSFLLSGSYRDrdgYLDYRNGGFVGNsgyerYNLNAK 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 326 LTYAPSSRFDTTLTYERMemeavpEQENNMRISNRNSPYYGQYYPVPRDFFWGSLNdravtetdtllWDARWRPSERFNL 405
Cdd:COG4771 226 LGYRLSDNHRLSLSGGYS------RQDRDGGPPTLGDTEISSDNAGDRDTTTDRGN-----------YSLRYNGDLGDNL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 406 NAYANYQESKQWWQNTRVNGAGNgpdadgnvqryvSGRQARDRNWSFGLDLSgkaYTGAFRHDWLTGAGYGHTQTRSSGR 485
Cdd:COG4771 289 DLSLYYSRTDRDSTNGSLGGSTG------------SFSDSDDTTYGLELDLT---YPLGGNHTLTLGAEYRYDDLDSSSF 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 486 QVAADsrpgqpytpgplnifdpdygnwhyqdriwedplaaaTKRNDLNLYFQNMLHLPDeKTRLLLAMGWAQFDSRPPDN 565
Cdd:COG4771 354 LGGAD------------------------------------ASRDTYGLFAQDEWKLTD-KLTLTAGLRYDYYSTFGASN 396
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 566 AqrnkiSKWSPRIALMHDLTPSTTVYASYGESF-YPN--ELNLLDMSGSYIT-------KPQEGKQYEIGFKQDLFDSRA 635
Cdd:COG4771 397 Y-----TAFSPRLGLRYDLSDNLTLRASYGRGFrAPSlaELYGSGTGTPGRYvlgnpdlKPETSDNYELGLEYRLGNGGL 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 636 MLTAALFRIDKKNMpMSAQPDGqcdplaaPAPGTPGTTDGSGDcrtslsglERSQGLELELSGLITDWWAASLSYAYLKT 715
Cdd:COG4771 472 SLSLTGFYTDIKDL-IVLVPVG-------PGPGDVLQYENVGK--------ARTYGLELELKYRLGKGLTLTASYTYLDS 535
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 716 EYvdteDPFSQGRSKPNMPAHNLALWNKFRVYQDPVYGTAHVAVGLRAWSkshnawrdpavgtyYNPYSRTDYNPGYGIV 795
Cdd:COG4771 536 KI----DDGDTGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVT--------------PPSGRLEGYTPGYTLL 597
|
....*....
gi 2108911506 796 DVGVFYANT 804
Cdd:COG4771 598 DLRASYKLT 606
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
93-825 |
1.25e-37 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 151.11 E-value: 1.25e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 93 LRQALSGSNLAYSLRGQVA--------TVRQQEVA--QLMPVTVSGDNLPAYIADTP--------TSIATKTSLPPRQTP 154
Cdd:PRK14050 1 MMCRSRGLHFMMLLAAGVAlaalvlsgLVAAQEGNttQLETIVVEGGNAASATATGPvdgyvakaTATGSKTDTPITEIP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 155 FTINQASQELIMERGDANIYD-TLEGFAGVTT----TSGNGDIgqsmsrsINVRGFSTGGAGqLLINGQRTYSSASAARS 229
Cdd:PRK14050 81 QSVSVVGRQEMDDRGVTNKVDeALRYTPGVLSqpfgTDGDTDW-------FYIRGFDATQTG-VFLDGLNLFSYGFGGFQ 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 230 PDS--LERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPLNQDDTLLYRLVGSYT- 306
Cdd:PRK14050 153 IDPfmLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAg 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 307 -HTVDDQDHIFQepKSVLAALTYAPSSRfdTTLTyermeMEAVPEQENNMRISNRNSPYYGQYYPVP-----RDFFWGSL 380
Cdd:PRK14050 233 gDNYSDYSEDLR--GFIMPQITYAPDDA--TSLT-----VYGYLSGLDQVHVGNGFLPYVGTVVDAPfgkidRDAFYGEP 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 381 NDRAVTETDTLL-------WDARWRpserFNLNA-YAN-YQESKQWWQNTRVNGAGNGPD---ADGNVQRYvsGRQARDR 448
Cdd:PRK14050 304 DIDNGSYAQQMLgyefsheFDNGWT----FSQNArYGHlHKHEKGPYTYGYVGGATGLPDptgPDYMLNRI--GFEHRSK 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 449 NWSFGLD--LSGKAYTGAFRHDWLTGAGYGHTQTRssgrQVAADSrpgqpyTPGPLNIFDPDYG-----NWHYQDRIwed 521
Cdd:PRK14050 378 VDSFSIDnrLEGEFDTGALTHNLLFGLDYKYYRLD----QVQACC------GATPISATNPVYGttqgaNFVYLDQI--- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 522 plaaaTKRNDLNLYFQNMLHLPDektrlllamGW------------AQFDSRPPDNAQRNKiSKWSPRIALMHDLTPSTT 589
Cdd:PRK14050 445 -----LTQQQIGIYAQDQIRFGD---------GWlvtlngrydyvdTDSDARIGTSYESND-GALSGRAGLAYEFDNGLT 509
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 590 VYASYGESFYPnelnLLD--MSGSYItKPQEGKQYEIGFK--QDLFDsrAMLTAALFRIDKKNMPMsaqpdgqcdplaap 665
Cdd:PRK14050 510 PYVSAATFFNP----LVGtlASGPPL-KPEEGEQYEAGIKyePSFID--GLITASVFQITKKNVTV-------------- 568
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 666 apgtpgtTDGSGDCRTSLsGLERSQGLELELSGLITDWWAASLSYAYLKTEYVDTEDPFSQGRSKPNMPAHNLALWNKFR 745
Cdd:PRK14050 569 -------TDPLTFASTQL-GEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDANPSLIGNSPYLVPETQASLWLDYA 640
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 746 VYQDPVYGTAhVAVGLRAWSKShnaWRDpavgtyynpYSRTDYNPGYGIVDVGVFYANTlangmDLKLQLNIKNLFNKTY 825
Cdd:PRK14050 641 VTDGAFEGVS-LGAGVRYQGES---WAD---------EANTLKVPAATLFDAAIRYEKN-----DWGASLNVANLFDKEY 702
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
161-853 |
1.90e-34 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 140.83 E-value: 1.90e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 161 SQELIMERGDANIYDTLEGFAGVTTTSGNGdIGQSMSrsINVRGFSTGGAG--QLLING------QRTYSSASAARSPDS 232
Cdd:COG4772 49 DREELENQAATSLREVLRRVPGVNVQEEDG-FGLRPN--IGIRGLGPRRSRgiTLLEDGipiapaPYGDPAAYYFPDLER 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 233 LERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTI---VGRTDSKGSYGSMVDMTGPLNqddtllYRLVGSYTHTV 309
Cdd:COG4772 126 MERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFGGELrvtGGSFGYRRTHASVGGTVGNFG------YLVEYSRKRGD 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 310 DDQDHIFQEPKSVLAALTYAPSSRFDTTLTYERMEMEA------VPEQ-ENNMRISNRnspyygqyypvPRDFFWgslnd 382
Cdd:COG4772 200 GFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDAntpgglTDAQfDADPRQSYR-----------PADQFD----- 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 383 ravteTDTLLWDAR--WRPSE--RFNLNAYANYQESKQWW-QNTRVNGAGNGPDADGNVQRYVSGRQARdrnwsfgldLS 457
Cdd:COG4772 264 -----TRRTQLSLRyeHQLSDntTLTTTAYYNDFSRNWYIrQNTADPNTPGLGLRGNPRGYRSYGIEPR---------LT 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 458 GKAYTGAFRHDWLTGAGYGH-TQTRSSGRQVAADSRPGQPYTpgplnifdpdygnwhyQDRIWEDplaaatkrNDLNLYF 536
Cdd:COG4772 330 HRFELGGVPHTLEVGLRYHReEEDRKQYVNTYGQGRSGAGLR----------------RDRRFSA--------DALAAYA 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 537 QNMLHLpDEKTRLLLAMGWAQFDSR---------PPDNAQRNKISKWSPRIALMHDLTPSTTVYASYGESFYPNELN-LL 606
Cdd:COG4772 386 QNRFEL-TGRLTLTPGLRYEHIRRDrtdrystrtGGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGdLA 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 607 DMSGSYIT-KPQEGKQYEIGFKQDLfDSRAMLTAALFRIDKKNmpmsaqpdgQCDPLAAPAPGTPGTTDGSgdcRTslsg 685
Cdd:COG4772 465 YGNGGNPDlKPEKSWNYELGTRGRI-GNGLSAEVALFYIDYDN---------ELGSCSAAGGDRSTFTNAG---ET---- 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 686 leRSQGLELELSGLI----TDWWAASLSYAYLKTEYVDTEDPFSQGRSKPNMPAHNLALWnkFRVYQDPVYGTAHVAVGL 761
Cdd:COG4772 528 --RHQGLELALDYDLlkggGLGLPLFAAYTYTDAEFTSDFGPVFAGNRLPYVPRHQLTAG--LGYEHGGWTANLNGRYVS 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 762 RAWSKSHNAWRDPAVGTYynpysrtdynPGYGIVDVGVFYanTLANGmdLKLQLNIKNLFNKTYYDRNRFANGTTIVWGN 841
Cdd:COG4772 604 EQFTDAANTVADGSFGKI----------PSYTVLDLSASY--DFGKN--LSLFAGVNNLFDKRYIASRAPNYAAGIRPGP 669
|
730
....*....|..
gi 2108911506 842 ERRAMLNAQLSF 853
Cdd:COG4772 670 PRTVYAGLRLKF 681
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
133-853 |
4.09e-31 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 130.65 E-value: 4.09e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 133 AYIADTPTSIATKTSLPPRQTPFTINQASQELIMERGDANIYDTLEGFAGVTTtsgnGDIGQSMS-RSINVRGFSTGGAG 211
Cdd:PRK10044 59 ATIAAKRSATGTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEALSYTPGVSV----GTRGASNTyDHLIIRGFAASGQS 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 212 Q-LLINGQR----TYSSASAarSPDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVD 286
Cdd:PRK10044 135 QnNYLDGLKlqgnFYNDAVI--DPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFD 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 287 MTGPLNQDDTLLYRLVGSYTHTVDDQDHIFQEPKSVLAALTYAPSSRfdTTLTYermemeavpeqennmrISN-RNSPYY 365
Cdd:PRK10044 213 FSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPSFTWRPDDK--TNFTF----------------LSYfQNEPET 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 366 GQYYPVPRDFFWGSLNDRAVTETDTLLWDARWRPSERFNLNAYANYQESKQWW---QNTR----------VNGAGNGPDA 432
Cdd:PRK10044 275 GYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFtvrQNLRyaenktsqrsVYGYGVCSDK 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 433 DGNVQRYVSGRQARDRNWSFGLDLSGKAYTGAFRHDWLTGAGYghTQTRSSgrqvaADSRPGqpyTPGPLNIFDpDYGNw 512
Cdd:PRK10044 355 GHYLNRGYVVDDEKLQNFSVDTQLQSKFATGDVDHTLLTGVDF--MRMRND-----INAWFG---YADSVPLLN-LYGP- 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 513 hyqDRIWEDPLAAATKRNDLNLYFQNMLHLPD--EKTRLLLAMG----WAQFDS--RPPDNAQRNKISKWSPRIALMHDL 584
Cdd:PRK10044 423 ---VNTDFDFNANSGPYQILNKQKQTGLYVQDqaEWDKWLVTLGgrydWADQSSlnRVNGTTDKRDDKQFTWRGGVNYLF 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 585 TPSTTVYASYGESFYPNELNllDMSGSyITKPQEGKQYEIGFKQDLFDSRAMLTAALFRIDKKNMPMSaqpdgqcDPlAA 664
Cdd:PRK10044 500 DNGITPYFSYSESFEPSSGT--GKDGN-IFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTA-------DP-EN 568
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 665 PAPGTPGttdgsgdcrtslsGLERSQGLELELSGLITDWWAASLSYAYLKTEYvdTEDPFSQGRSKPNMPAHNLALWNKF 744
Cdd:PRK10044 569 SFFSVQG-------------GEIRARGVELEAKAALSANVNVTGSYTYTDAEY--TTDTTYKGNTPAQVPKHMASLWADY 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 745 RVYQDPVYGTAhVAVGLRawskshnawrdpAVGTYYNPYSRTDYNPGYGIVDVGVFYanTLAN-GM-DLKLQLNIKNLFN 822
Cdd:PRK10044 634 TFFDGPLSGLT-LGTGGR------------YTGSSYGDPANSFKVGSYTVVDALVKY--DLARfGMaGSSVALNVNNLFD 698
|
730 740 750
....*....|....*....|....*....|....*
gi 2108911506 823 KTY----YdrnrfaNGTTIVWGNERRAMLNAQLSF 853
Cdd:PRK10044 699 REYvascF------NTYGCFWGAERQVVATATFRF 727
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
93-823 |
1.48e-30 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 128.87 E-value: 1.48e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 93 LRQALSG-SNLAYSLRGQVATVRQQEVAQLMPVTV--------SGDNLPA--YIAdTPTSIATKTSLPPRQTPFTINQAS 161
Cdd:PRK14049 9 IRAALAGtSALALVATAQAQDAGQESVSNEASTALetlvvnggSGGVITAdgYVA-TSSATGAKVDTPFLETPQSISSVT 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 162 QELIMERGDANIYDTLEGFAGVTTTSGNGDigqSMSRSINVRGFSTGGAGqLLINGQRTYSSASA--ARSPDSLERVELL 239
Cdd:PRK14049 88 EQQLKDRNPQTLLETLAYTPGARVGAFGFD---PRFDAFFVRGFDVTYTG-VFRDNLRQPGASSSifKTEPYGLEGVSIL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 240 RGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPLNQDDTLLYRLVGSYTHTVDDQDHIFQEP 319
Cdd:PRK14049 164 RGPSSALYGASGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGPVNETDPVYYRLTGLLRDADTEQVGVPDDR 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 320 KSVLAALTYAPSSrfDTTLTYermeMEAVPEQENNMRISNRNSPYYGQYypvpRDFFWGS--LNDrAVTETDTLLWDARW 397
Cdd:PRK14049 244 AYIAPAFTWKPDE--DTRLTV----LGEYSRTKTGGTAAYYNDPLTGEV----TDIFAGNpaFND-SVQKQGRIGYEFEH 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 398 RPSERFNLNayanyqeskqwwQNTRVNGAGNGPDADGNVQRYVSGRQARDRNW--------SFGLD--LSGKAYTGAFRH 467
Cdd:PRK14049 313 RLNDTFVFR------------QNARVSTLNIDADWAFAYAPNAADPTLLDSSAgtyderltAFVIDnqLEAKFDTGAFEH 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 468 DWLTGAGYGHTQTRS-SGRQVAADSRPGQPYTPGPLNIFDpdygnwhYQDRIWEDPLAAATKRNDLNLYFQNMLHL---- 542
Cdd:PRK14049 381 TLLAGVDYTKLRFRAlNGRGVSPPLDTKNPTQGRPVAAID-------FSTRTVQDQWQLGTYLQDQIRYDAWTLTAggry 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 543 ----PDEKTRLLLAMGWAQFDsrppdnaQRNKisKWSPRIALMHDLTPSTTVYASYGESFYPNElnLLDMSGSYITKPQE 618
Cdd:PRK14049 454 dwvsTDTDTTDLATDSLTTVS-------QKDK--EFSGRIGLTYETDFGLAPYISYSTAFSPNA--GFNRATNQPFKPTE 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 619 GKQYEIGFKQDLFDSRAMLTAALFRIDKKNmpmsaqpdgqcdplaapAPGTPGTTDGSGDCRTSLS-GLERSQGLELELS 697
Cdd:PRK14049 523 SEQQEVGVKYLLPNSNTLITAALFNIDQTN-----------------GLYYEVVFLAAGPTNIQVQrGKLRSRGFELEAN 585
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 698 GLITDWWAASLSYAYLKTEYVDTEDPfSQGRSKPNMPAHNLALWNKFRVYQD-PVYGTAhVAVGLRawskshnawrdpAV 776
Cdd:PRK14049 586 TSLDNGLSLIASYTYTDVKIIQGPEG-TIGNEVSSVPNHMASAWAHYTLPEGgPLYGLG-LGAGAR------------FV 651
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 2108911506 777 GTYYNPYSRTDYNPGYGIVDVGVFYANTLANGM--DLKLQLNIKNLFNK 823
Cdd:PRK14049 652 GSSYGNDQNTFKNSSRVLFDASVGYDFAAIDKKyeGLMLQVNATNLFDR 700
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
359-852 |
2.19e-30 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 126.04 E-value: 2.19e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 359 NRNSPYYGQYYPVPRDFFWGSLNDRAVTETDTL-------LWDARWRPSERFNLNAYANYQESKQWWQNTRVNG--AGNG 429
Cdd:pfam00593 12 DTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLgdrplyyGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLrySSLD 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 430 PDADGNVQRYVSGRQARDRNWSFGLDLSGKAYTGAFRHDWLTGAGYGHTQTRSSGRQvaadsrpgqpYTPGPLNIFDPDY 509
Cdd:pfam00593 92 GDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRR----------LDDDAYDPYDPAN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 510 GNwhyqdriweDPLAAATKRNDLNLYFQNMLHLPDektRLLLAMG----WAQFDS---RPPDNAQRNKISKWSPRIALMH 582
Cdd:pfam00593 162 PS---------SSSYSDTTTDSYGLYLQDNIKLTD---RLTLTLGlrydHYSTDGddgNGGGDNFSRSYSAFSPRLGLVY 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 583 DLTPSTTVYASYGESF---YPNELNLLDMSGSYIT--------KPQEGKQYEIGFKqdLFDSRAMLTAALFRIDKKNMPM 651
Cdd:pfam00593 230 KPTDNLSLYASYSRGFrapSLGELYGSGSGGGGGAvaggnpdlKPETSDNYELGLK--YDDGRLSLSLALFYIDIKNLIT 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 652 SaQPDGQCDPLAAPAPGTPGTTdgsgdcrtslsgleRSQGLELELSGLITDWWAASLSYAYLKTEyvDTEDPFSQGRSKP 731
Cdd:pfam00593 308 S-DPDGPGLGGTVYTYTNVGKA--------------RIRGVELELSGRLWGLGLSGGGYTYTDAD--DDADADDTGNPLP 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 732 NMPAHNLALWNKFRVYQDPvygtahvavglraWSKSHNAWRDPAVGTYYNPYSRTDYNPGYGIVDVGVFYANTlangMDL 811
Cdd:pfam00593 371 NVPRHTANLGLTYDFPLGG-------------WGARLGARYVGSGERRYGDAANTFKTPGYTLVDLSAGYRLN----KNL 433
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 2108911506 812 KLQLNIKNLFNKTY-YDRNRFANGTTIVWGNERRAMLNAQLS 852
Cdd:pfam00593 434 TLRLGVNNLFDKYYkRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
140-853 |
1.11e-26 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 116.51 E-value: 1.11e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 140 TSIATKTSLPPRQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTSGNGDIGQSMSRSINVRGFstggagqlLINGQR 219
Cdd:PRK10003 65 TSAGTKMQMTQRDIPQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNY--------MVDGIP 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 220 TYSSA-----SAARSPDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAytivgRTDSKGSYGS------MVDMT 288
Cdd:PRK10003 137 TYFESrwnlgDALSDTALFERVEVVRGATGLMTGTGNPSAAINMVRKHATSREF-----KGDVSAEYGSwnkqryVADLQ 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 289 GPLNQDDTLLYRLVGSYTHTVDDQDHIFQEPKSVLAALTYAPSSRFDTTLTYERMEmeavpeqennmriSNRNSPYYGQy 368
Cdd:PRK10003 212 SPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQR-------------IDVNSPTWGG- 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 369 ypVPRDFFWGSLN--DRAVTETdtllwdARWRPSERFNLNAYANY-QESKQWWQNT----------------------RV 423
Cdd:PRK10003 278 --LPRWNTDGSSNsyDRARSTA------PDWAYNDKEINKVFMTLkQRFADTWQATlnathsevefdskmmyvdayvdKA 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 424 NGAGNGPDAD-GNVQRYV------SGRQARDRNWSF---GLDLSGKaytgafRHDWLTGAGYghtqtrssgrqvaadSRP 493
Cdd:PRK10003 350 TGMLVGPYSNyGPGFDYVggtgwnSGKRKVDALDLFadgSYELFGR------QHNLMFGGSY---------------SKQ 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 494 GQPYTPGPLNIFDPDYGNWHYQDRIWEDP------LAAATKRNDLNLYFQNMLHLPDeKTRLLLAMGWAQFDSRPPD-NA 566
Cdd:PRK10003 409 NNRYFSSWANIFPDEIGSFYNFNGNFPQTdwspqsLAQDDTTHMKSLYAATRVSLAD-PLHLILGARYTNWRVDTLTySM 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 567 QRNKISkwsPRIALMHDLTPSTTVYASYGESFYPNelNLLDMSGSYITkPQEGKQYEIGFKQDLFDSRAMLTAALFRIDK 646
Cdd:PRK10003 488 EKNHTT---PYAGLVYDINDNWSTYASYTSIFQPQ--NDRDSSGKYLA-PITGNNYELGLKSDWMNSRLTTTLAIFRIEQ 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 647 KNMpmsAQPDGqcdplaAPAPGTPGTTdgsgdCRTSLSGLErSQGLELELSGLITDWWAASLSyaylKTEYVdTEDpfSQ 726
Cdd:PRK10003 562 DNV---AQSTG------TPIPGSNGET-----AYKAVDGTV-SKGVEFELNGAITDNWQLTFG----ATRYI-AED--NE 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 727 GRS-KPNMPAHNLALwnkFRVYQDPVYGTAHVAVGLRaWSKShnAWRDPAvgtyyNPYSRTDYNPG-YGIVDVGVFYANT 804
Cdd:PRK10003 620 GNAvNPNLPRTTVKL---FTRYRLPVMPELTVGGGVN-WQNR--VYTDTV-----TPYGTFRAEQGsYALVDLFTRYQVT 688
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 2108911506 805 langMDLKLQLNIKNLFNKTYYDRnrfaNGTTIVWGNERRAMLNAQLSF 853
Cdd:PRK10003 689 ----KNFSVQGNVNNLFDKTYDTN----VEGSIVYGAPRNFSITATYQF 729
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
115-853 |
1.36e-23 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 106.81 E-value: 1.36e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 115 QQEVAQLMPVTVSGDNLPA-YIADTPTSiaTKTSLPPRQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTSGNGDIG 193
Cdd:PRK09840 34 AEGQTNADDTLVVEASTPSlYAPDQSAD--PKFSQPLADTTQTITVISEQVIKDQGATNLTEALRNVPGVGTFFAGENGN 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 194 QSMSRSINVRGFSTggAGQLLINGQRTYSSASaaRSPDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYtivg 273
Cdd:PRK09840 112 TTTGDAIYMRGFDT--SNSIYVDGIRDIGSIS--RDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGI---- 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 274 rtDSKGSYGS------MVDMTGPLNQDDTLLYRLVGSYTHtVDDQDHIFQEPKSVLAALTYAPSSRFDTTLTYERMEMEA 347
Cdd:PRK09840 184 --DASASIGSawfrrgTLDVNQVIGDTTAVRLNVMGEKTH-DAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQNN 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 348 VPE--------------------QENNMRISNRNspyygqYYPVPRDFfwgslnDRAVTETDTLlwdarwrpseRF--NL 405
Cdd:PRK09840 261 TPDggiptiglpgysapsagraaLNHAGKVDTHN------FYGTDSDY------DDSTTDTATM----------RFehDI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 406 NAYANYQESKQWWQNTR-------VNGAGNGPDADGN------VQRYVSGRQARDRNWSFGLDLSGKAYTGAFRHDWLTG 472
Cdd:PRK09840 319 NDNTTLRNTTRWSRVKQdylltaiMGGASNITTPTPSdvntwtWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 473 AGYghTQTRSSGRQVAADSRPGqpytpgpLNIFDPDY----GNWhyqDRIWEDplaAATKRNDLNLYFQNMLHLpdekTR 548
Cdd:PRK09840 399 VEF--TRETQTNYGVNPVTLPA-------VNLYHPDSsihpGGL---TRNGAN---ANGQTDTFAIYAFDTLQL----TR 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 549 LLLAMGWAQFD-----------------SRPPDNAQRNKIS--------------KWspRIALMHDLTPSTTVYASYGES 597
Cdd:PRK09840 460 DWELNGGIRLDnyhteydsatacggsgrGAITCPAGVAKGSpvttvdtaksgnlvNW--KAGALYKLTENGNVYINYAVS 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 598 FYPNELNLLDMSGSYIT--------KPQEGKQYEIGFKQDLFDSRAMLTAALFRIDKKNmPMSAQPDGQcdplaapapgt 669
Cdd:PRK09840 538 QQPPGGSNFALAQSGSGnsanrtdfKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIEN-EVEQNDDGT----------- 605
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 670 pgttdgsgdcrTSLSGLERSQGLELELSGLITDWWAASLSYAYLKTEyVDTEDPFSQGRSK--PNMPAHNLALWNKFRVY 747
Cdd:PRK09840 606 -----------YSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKAT-VKNGKDVAQDGSSslPYTPEHAFTLWSQYQAT 673
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 748 QD-PVYGTAHVAVGLRAWSkshnawrDPAVGTyynpysrTDYNPGYGIVDVGVFYANTlangMDLKLQLNIKNLFNKTYY 826
Cdd:PRK09840 674 DDlSVGGGARYIGSMHRGS-------DGAVGT-------PAFTEGYWVADAKLGYRVN----RNLDLQLNVYNLFDTDYV 735
|
810 820
....*....|....*....|....*...
gi 2108911506 827 DR-NRfaNGTTIVWGNERRAMLNAQLSF 853
Cdd:PRK09840 736 ASiNK--SGYRYHPGEPRTFLLTANMHF 761
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
136-826 |
7.36e-23 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 104.40 E-value: 7.36e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 136 ADTPTSIATKTSLPPRQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTSGNGDIGQSmsrsINVRGFS-------TG 208
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQS----INIRGLQdnrvlvvVD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 209 GAGQlliNGQRTYS-SASAARSPDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQ----------AQAAYTiVGRTDS 277
Cdd:TIGR01785 77 GARQ---NYQRGGAhNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAAdllrpgqlfgGLAKLS-YGSNNN 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 278 KGSYGSMVDMTGPLNQDdtllyRLVGSYTHTVDDQDHIFQEP--------KSVLAALTY--APSSRFDTTLTYermemea 347
Cdd:TIGR01785 153 SFGGSVAVAGRLDDNLD-----ALVAATYRDGGNYRNGNKEEatnsayvqKNLLAKLGWqlDDAQRLEFSYFT------- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 348 vpeQENNMRISNRNSPyyGQYYpvprDFFWGSLNDRAVTETDTLLWDARWRPSERFNLNAYAN--YQESKQWwqNTRvng 425
Cdd:TIGR01785 221 ---TEGSLDEAQNSGP--GTEY----VLGSSSTLLASSTRDRSATLTYNWTPEDNPWLDATASlyYNRTEND--NDR--- 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 426 AGNGPDADGNVQRYVSGRQARDRNWSFGLDLSGKAYTGafrhDWltgagYGHTQTRSSGRqvaadsrpgqPYTPGPLNIF 505
Cdd:TIGR01785 287 SARGVGREEGYQYTTYGATLQNTSRFDVASWSTLTYGV----DW-----MKDKRRTESFD----------PNSVTTIVPN 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 506 DPDYgnwhyqdriwedplaaatKRNDLNLYFQNMLHLPDEKTRLLLAMGWAQFDSRPPDNAQRNKI----SKWSPRIALM 581
Cdd:TIGR01785 348 PPSA------------------KEYFFGLFLQDNIPLLDDRLTLSAGLRYDHYKLSPKTTADTEAVdrsySRWSPSLGLS 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 582 HDLTPSTTVYASYGESFYPNelnllDMSGSYIT------------------KPQEGKQYEIGFK---QDLF--DSRAMLT 638
Cdd:TIGR01785 410 YKPVDWLTLYASYSQGFRAP-----SIDELYGTgdhpgtpggytfapnpnlKPETSKTWELGANlsfDNLLldNDQLQFK 484
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 639 AALFRIDKKNMpmsaqpdgqcdpLAAPAPGTPGTTDGSGDCRTSLSGLE-RSQGLELELSgLITDWWAASLSYAYLKTEY 717
Cdd:TIGR01785 485 VAYFYNDVKDF------------IDLTIGVTDNVTAGMNNITQYVNIDGaRIRGIEASAS-YDAGLWATGLSYGYTIGKD 551
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 718 VDTEDPFSqgrskpNMPAHNLALWNKFRVYQDPVYGTAHVAvglRAWSKSHNAWRDPAVGTYYNPYsrtdynPGYGIVDV 797
Cdd:TIGR01785 552 QNTNQWLS------NIPPLKLVVTVGYRFPDRRLDLGAKAA---YYERQSESPTTEDVAANGLLTT------PGYTVVDL 616
|
730 740
....*....|....*....|....*....
gi 2108911506 798 GVFYANTlaNGMDLKLQLNIKNLFNKTYY 826
Cdd:TIGR01785 617 YATYQPN--AVKGLTVRFGVNNLTDRKYT 643
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
149-255 |
1.45e-18 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 81.55 E-value: 1.45e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 149 PPRQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTSGNGDIGQSmsrsINVRGFSTGGAGqLLINGQRTYSSASAAR 228
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGGSS----ISIRGFGSNRVL-VLVDGVPLNSGGGGSV 75
|
90 100 110
....*....|....*....|....*....|..
gi 2108911506 229 S-----PDSLERVELLRGPAALYYGAAEPGGI 255
Cdd:pfam07715 76 DlnsidPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
142-424 |
9.78e-18 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 84.15 E-value: 9.78e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 142 IATKTSLPPRQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTSgNGDIGQSMSrsINVRGFSTGGAgQLLINGQRTY 221
Cdd:COG4206 4 TATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSS-SGGPGSAAS--ISIRGLGSNQT-LVLIDGVPLN 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 222 SSASAAR-----SPDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIVGRTDSKGSYGSMVDMTGPLNQDDt 296
Cdd:COG4206 80 DPSLGGVdlsliPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGGAGKFS- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 297 llYRLVGSYTHT-------VDDQDHIFQEPKSVLAALTYAPSSRFDTTLTYermemeavpeqennmRISNRNSPYYGQYY 369
Cdd:COG4206 159 --YSLSASYRRSdgyryndPDLRNNDGYENTSLNARLGYKLGDNGSLSLSG---------------GYSDSERGYPGAVG 221
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2108911506 370 PVPRDFFWGSLnDRAVTETDTLLWDARWRPSERFNLNAYANYQESKQWWQNTRVN 424
Cdd:COG4206 222 SDRNLRLSLSL-EYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLS 275
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
151-338 |
3.05e-11 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 67.11 E-value: 3.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 151 RQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTsGNGDigqsmSRSINVRGFstgGAG--QLLINGQRTYSSASAAR 228
Cdd:PRK13483 48 RDAPASISVITREDLENRFYRDLTDALLDVPGVVVT-GGGD-----RTDISLRGM---GSQytLILVDGKRQSSRETRPN 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 229 SPDS------------LERVELLRGPAALYYGAAEPGGIVN-YTYKRPQ-----AQAAYTIVGRTDSKGSYGSMVDMTGP 290
Cdd:PRK13483 119 SDGPgveqawtpplaaIERIEVIRGPMSSLYGSDAIGGVINiITRKVPNewqgeVRLDTTLQENSDSGNVYQANFFVNGP 198
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2108911506 291 LnQDDTLLYRLVGSYTHTV-DDQDHIF--QEPKSVLAALTYAPSSRFDTTL 338
Cdd:PRK13483 199 L-IKDLLGLQLYGQYTQREeDDIEGGYrdKDARSLTAKLALTPNEDHDIML 248
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
137-823 |
2.54e-08 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 57.59 E-value: 2.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 137 DTPTSIATKTSLPPRQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTsGNGDigqsMSRSINVRGFSTGGAgQLLIN 216
Cdd:PRK10064 31 ETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLT-NEGD----NRKGVSIRGLDSSYT-LILID 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 217 GQRTYSSASAARSPD---------SLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQ------AAYTIVGRTDSKGSY 281
Cdd:PRK10064 105 GKRVNSRNAVFRHNDfdlnwipvdAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKwhgtvtVDTTIQEHRDRGDTY 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 282 GSMVDMTGPLnQDDTLLYRLVGSYTHTVDDQDhifQEPksvlaaltyapssrfDTTLTYERMEMEAVPEQENNMRIS--- 358
Cdd:PRK10064 185 NGQFFTSGPL-IDGVLGMKAYGSLAKREKDDP---QNS---------------TTTDTGETPRIEGFTSRDGNVEFAwtp 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 359 NRNSPYYGQYYPVPRDFFWGSLN-DRAVTETDTLLWDARWRPSERfNLNAYANYQESKQWWQNTRVNGAGNGPDAdgnvq 437
Cdd:PRK10064 246 NQNHDFTAGYGFDRQDRDSDSLDkNRLERQNYSLSHNGRWDYGNS-ELKYYGEKVENKNPGNSSPITSESNSIDG----- 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 438 RYVSGRQARDRNWSFGldlsgkaytGAFRHDWLTGAG--YGHTQTRSSGRQVAadsrpgqpytpgplnIFDPDygNWhyq 515
Cdd:PRK10064 320 KYTLPLTAINQFLTFG---------GEWRHDKLSDAVnlTGGTSSKTSASQYA---------------LFVED--EW--- 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 516 dRIWEDPLAAATKRNDLNLYFQNmlhlpdektrlllamgwaqfdsrppdnaqrnkisKWSPRIALMHDLTPSTTVYASYG 595
Cdd:PRK10064 371 -RIFEPLALTTGVRMDDHETYGD----------------------------------HWSPRAYLVYNATDTVTVKGGWA 415
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 596 ESFypNELNLLDMSGSYIT---------------KPQEGKQYEIGFKQD-----LFDSRAMLTAalFRIDKKNMPMSAQp 655
Cdd:PRK10064 416 TAF--KAPSLLQLSPDWTSnscrgackivgspdlKPETSESWELGLYYMgeegwLEGVESSVTV--FRNDVDDRISISR- 490
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 656 dgQCDPLAAPA-PGTPG-TTDGSGDCRTSLS----GLERSQGLELELSGLITDWWAASLSYAYLkteyvDTEDpFSQGRS 729
Cdd:PRK10064 491 --TSDVNAAPGyQNFVGfETNGRGRRVPVFRyynvNKARIQGVETELKIPFNDEWKLSLNYTYN-----DGRD-VSNGEN 562
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 730 KP--NMPAHnlalwnkfrvyqdpvygTAHVAVGlraWSKSHNAWRDPAVGTYYNPYSRTDYN-----PGYGIVDVGVFYA 802
Cdd:PRK10064 563 KPlsDLPFH-----------------TANGTLD---WKPLALEDWSFYVSGNYTGQKRADSAtaktpGGYTIWNTGAAWQ 622
|
730 740
....*....|....*....|.
gi 2108911506 803 NTlangMDLKLQLNIKNLFNK 823
Cdd:PRK10064 623 VT----KDVKLRAGVLNLGDK 639
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
151-853 |
6.55e-08 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 56.17 E-value: 6.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 151 RQTPFTINQASQELIMERGDANIYDTLEGFAGVTTTSGNGdigqsmSRSINVRGFStGGAGQLLINGQRTYSSASAARSP 230
Cdd:PRK13484 45 RNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITGGNE------KPDISIRGLS-GDYTLILVDGRRQSGRESRPNGS 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 231 -----------DSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQAAYTIV---GRTDSKGSYGSMVD----MTGPLN 292
Cdd:PRK13484 118 ggfeagfippvEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNNQTWDGVLglgGIIQEHGKFGNSTTndfyLSGPLI 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 293 QDDTLLYRLVGSYTHTVDD--QDHIFQEPKSVLAALTYAPSSRFDTTLTYER--MEMEAVPEQ---ENNMRiSNRNSPyy 365
Cdd:PRK13484 198 KDKLGLQLYGGMNYRKEDSisQGTPAKDNKNITATLQFTPTESQKFVFEYGKnnQVHTLTPGEsldAWTMR-GNLKQP-- 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 366 gqyypvprdffwgslNDRAVTETDTLLWDARWRPSERFNLNAYANYQEskqwwQNTRVNGAGNGPDADGNVQRYVSgRQA 445
Cdd:PRK13484 275 ---------------NSKRETHNSRSHWVAAWNAQGEILHPEIAVYQE-----KVIREVKSGKKDKYNHWDLNYES-RKP 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 446 RDRNWSFgldlsGKAYTGAFRHDWLT-GAGYGHTQTRSsgrqvaaDSRPGQPYTPgplnifdpdygnwhyQDRIWEDpla 524
Cdd:PRK13484 334 EITNTII-----DAKVTAFLPENVLTiGGQFQHAELRD-------DSATGKKTTE---------------TQSVSIK--- 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 525 aatkrndlnlyfQNMLHLPDE--KTRLLLAMGWAQFDSRPPDNaqrnkiSKWSPRIALMHDLTPSTTVYASYGESFYPNE 602
Cdd:PRK13484 384 ------------QKAVFIENEyaATDSLALTGGLRLDNHEIYG------SYWNPRLYAVYNLTDNLTLKGGIAKAFRAPS 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 603 LNLLD-------------MSGSYITKPQEGKQYEIGFKQDlFDSRAMLTAALFRIDKKNmPMSAQPDGQCDPLAapapgt 669
Cdd:PRK13484 446 IREVSpgfgtltqggasiMYGNRDLKPETSVTEEIGIIYS-NDSGFSASATLFNTDFKN-KLTSYDIGTKDPVT------ 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 670 pgttdGSGDCRTSLSGLERSQGLELELSGLITDWWAASLSYAYLKTEYVDTEDPFS----QGRSKPNMPAHNLALWNKFR 745
Cdd:PRK13484 518 -----GLNTFIYDNVGEANIRGVELATQIPVYDKWHVSANYTFTDSRRKSDDESLNgkslKGEPLERTPRHAANAKLEWD 592
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 746 VYQDPVYGTAHVAVGLRAWSKSHNAWRDPAvgtyynpysrtdYNPGYGIVDVGVFYaNTLANGMdlkLQLNIKNLFNKTY 825
Cdd:PRK13484 593 YTQDITFYSSLNYTGKQIWAAQRNGAKVPR------------VRNGFTSMDIGLNY-QILPDTL---INFAVLNVTDRKS 656
|
730 740
....*....|....*....|....*...
gi 2108911506 826 YDRNRFANGTTIVWGneRRAMLNAQLSF 853
Cdd:PRK13484 657 EDIDTIDGNWQVDEG--RRYWANVRVSF 682
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
92-335 |
7.73e-08 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 55.93 E-value: 7.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 92 ALRQALSGSNLAYSLRGQVATVRQQevaqLMPVTVSGdnLPAYIADTPTSIATKTslpprqtpftinqasQELIMERGDA 171
Cdd:PRK13513 12 ALVIAAAISSQAYAAEKTNTATPTD----TMVVTASG--FQQRIQDAPASISVVT---------------REQLENKAYR 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 172 NIYDTLEGFAGVTTTSGNGdigqsmSRSINVRGFStGGAGQLLINGQRTYSSASAARSPDS------------LERVELL 239
Cdd:PRK13513 71 DVTDALKDVPGVVVTGGGS------TSDISIRGMA-AKYTLILVDGKRVDTRSTRPNSDGSgieqgwlpplaaIERIEVV 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 240 RGPAALYYGAAEPGGIVNYTYKRPQAQ------AAYTIVGRTDSKGSYGSMVDMTGPLnQDDTLLYRLVGSYTHTVDDQ- 312
Cdd:PRK13513 144 RGPMSSLYGSDAMGGVINIITRKVQKEwhgslrADATLQEDSKSGDIFQTNAYASGPL-IDGLLGLKVSGLLSHRSEDKi 222
|
250 260
....*....|....*....|....*..
gi 2108911506 313 --DHIFQEPKSVLAALTYAPS--SRFD 335
Cdd:PRK13513 223 idGYNEQRMRNGTATFSLTPDdnNEFD 249
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
230-313 |
9.22e-08 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 55.81 E-value: 9.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 230 PDSLERVELLRGPAALYYGAAEPGGIVNYTYKRPQAQA-----AYTIVGRTDSKGSYGSM-VDMTGPLNqdDTLLYRLVG 303
Cdd:PRK13524 143 PEMIERIEVLRGPAAARYGNGAAGGVVNIITKKPTGEWhgswnTYFNAPEHKAEGATKRTnFSLSGPLG--DELSFRLYG 220
|
90
....*....|.
gi 2108911506 304 SYTHT-VDDQD 313
Cdd:PRK13524 221 NLNKTqADAWD 231
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
182-315 |
1.16e-07 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 55.53 E-value: 1.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 182 GVTTTsGNGDIGQ-SMSRSINVRGFstGGAGQL-LINGqRTYSSASAAR----------------SPDSLERVELLRGPA 243
Cdd:PRK13528 79 GVNLT-GNSASGTrGNNRQIDIRGM--GPENTLiLIDG-VPVTSRNSVRyswrgerdtrgdtnwvPPEMVERIEVIRGPA 154
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2108911506 244 ALYYGAAEPGGIVNYTYKRPQAQAA-----YTIVGRTDSKG-SYGSMVDMTGPLNqDDTLLYRLVGSYTHTVDDQDHI 315
Cdd:PRK13528 155 AARYGSGAAGGVVNIITKRPTNDWHgslslYTNQPESSKEGaTRRANFSLSGPLA-GDALTMRLYGNLNKTDADSWDI 231
|
|
| STN |
smart00965 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
66-108 |
9.78e-07 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 198033 [Multi-domain] Cd Length: 52 Bit Score: 46.34 E-value: 9.78e-07
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2108911506 66 LSIAFDPRQVEHFQAPAIRGVMTSEQALRQALSGSNLAYSLRG 108
Cdd:smart00965 1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGLTYRRIG 43
|
|
| STN |
pfam07660 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
67-116 |
6.17e-06 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 429580 [Multi-domain] Cd Length: 51 Bit Score: 44.04 E-value: 6.17e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2108911506 67 SIAFDPRQVEHFQAPAIR-GVMTSEQALRQALSGSNLAYSLRGQVATVRQQ 116
Cdd:pfam07660 1 SILYDSDLVDGKQSVSLNvGNVTLEEALDQLLAGTGLSYEIGGNTIVLRPK 51
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
161-262 |
4.91e-04 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 43.86 E-value: 4.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2108911506 161 SQELIMERGDANIYDTLEGFAGVTTTSGNGDIG------QSMSRS---INVRGFSTGGAGQLLINGqrtYSSASAARSP- 230
Cdd:PRK13486 50 SQEELQSSQYHDLAEALRSVEGVDVESGTGKTGgleisiRGMPASytlILIDGVRQGGSSDVTPNG---FSAMNTGFMPp 126
|
90 100 110
....*....|....*....|....*....|...
gi 2108911506 231 -DSLERVELLRGPAALYYGAAEPGGIVNYTYKR 262
Cdd:PRK13486 127 lAAIERIEVIRGPMSTLYGSDAMGGVVNIITRK 159
|
|
| |
