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Conserved domains on  [gi|2155110242|ref|WP_229810209|]
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glycoside hydrolase family 3 N-terminal domain-containing protein [Actinomadura citrea]

Protein Classification

glycoside hydrolase family 3 protein( domain architecture ID 11444863)

glycoside hydrolase family 3 (GH3) protein catalyzes the hydrolytic removal of nonreducing glycosyl end residues from a broad range of beta-D-glycans and beta-D-glycosides; similar to Wickerhamomyces anomalus beta-glucosidase, which catalyzes the hydrolysis of terminal beta-D-glucosyl residues

CAZY:  GH3
EC:  3.2.1.-
Gene Ontology:  GO:0005975|GO:0004553
SCOP:  4003202

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
63-468 2.29e-124

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


:

Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 375.96  E-value: 2.29e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  63 MTPQEKIGQMAQAERGAIDgdRDQITKLALGSVLSGggstpadnTPAGWADMVDAYQSkalATRLKIPLLYGVDSVHGHN 142
Cdd:COG1472     1 MTLEEKIGQLFQVGVTGEG--AELIREGHVGGVILF--------DPAQWAELTNELQR---ATRLGIPLLIGTDAEHGVA 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 143 N--LVGATVFPHNIAMGATRDPGLVRREEQITAIETKATGPQWVFAPCVCVTRDLRWGRAYESFGEDPRLVVQMETGL-E 219
Cdd:COG1472    68 NrpAGGATVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDINRDPRWGRNFESFGEDPYLVGRMAAAYvR 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 220 GFEGrrrsdlatnRHVLATAKHFAGDGDTVFGSstsgtytiDQGVTVTDREHFAAVDLAPYVVAVKKyGVGSIMPSFSSV 299
Cdd:COG1472   148 GLQG---------NGVAATAKHFAGHGDEETGR--------HTGPVDVSERELREIYLPPFEAAIKA-GVASVMTAYNAL 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 300 dwkedgvgNPVKMSAHKELLTDVLKKKIGFDGFLISDWEAIHQIP--GDYATQVRTSVNAGMDMFMEPYstPQFVQTLLA 377
Cdd:COG1472   210 --------NGVPATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAehYDPAEAAVLALNAGLDLEMPGG--KAFIAALLE 279
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 378 EVQAGRVPMSRIDDAVARILKAKFELGLFEHPYTDRGNA-GTIGSPEHRAVAREAVAKSQVLLKNSGNALPLRRNQRIYV 456
Cdd:COG1472   280 AVESGELSEERIDEAVRRILRLKFRLGLFDDPYVDPERAaEVVGSPEHRALAREAARESIVLLKNDNGLLPLAALAAGGA 359
                         410
                  ....*....|..
gi 2155110242 457 AGANADDIGNQA 468
Cdd:COG1472   360 LAADAAAAAAAA 371
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
437-636 4.45e-43

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


:

Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 154.01  E-value: 4.45e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 437 VLLKNSGNALPLRRNQ-RIYVAGANADDIGNQAGGWtvtwqgSSGDIIPGTTILDGIRQ-------------------NS 496
Cdd:pfam01915   2 VLLKNENGLLPLPKKAkKIAVIGPNADDPPNGGGGS------GTGNPPYLVTPLDGIRAragdlyadgahltvilsngTA 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 497 SQVTYSQDASAPTAGNDVGIVVVGEKPYAEGVG-DVGNghtLNLSDADEAAVDKVCSAIRTCVVLDVAGRPQIVT-DQLA 574
Cdd:pfam01915  76 DDDAGIAEAVAAAKDADVAIVFVGLDPETEGEGyDRTD---LALPGNQDALIKAVAAAGKPTVVVLHSGGPVEMEpWAEE 152
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2155110242 575 KTDAFVMSWLPGSE-GAGVADVLFGRRAFTGRLPVTWPRAEAQEPInVGDRDYRPLFPYGYGL 636
Cdd:pfam01915 153 NVDAILAAWYPGQEgGNAIADVLFGDVNPSGKLPVTFPKSLEDLPA-EGGPLLPDLYPEGYGL 214
 
Name Accession Description Interval E-value
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
63-468 2.29e-124

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 375.96  E-value: 2.29e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  63 MTPQEKIGQMAQAERGAIDgdRDQITKLALGSVLSGggstpadnTPAGWADMVDAYQSkalATRLKIPLLYGVDSVHGHN 142
Cdd:COG1472     1 MTLEEKIGQLFQVGVTGEG--AELIREGHVGGVILF--------DPAQWAELTNELQR---ATRLGIPLLIGTDAEHGVA 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 143 N--LVGATVFPHNIAMGATRDPGLVRREEQITAIETKATGPQWVFAPCVCVTRDLRWGRAYESFGEDPRLVVQMETGL-E 219
Cdd:COG1472    68 NrpAGGATVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDINRDPRWGRNFESFGEDPYLVGRMAAAYvR 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 220 GFEGrrrsdlatnRHVLATAKHFAGDGDTVFGSstsgtytiDQGVTVTDREHFAAVDLAPYVVAVKKyGVGSIMPSFSSV 299
Cdd:COG1472   148 GLQG---------NGVAATAKHFAGHGDEETGR--------HTGPVDVSERELREIYLPPFEAAIKA-GVASVMTAYNAL 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 300 dwkedgvgNPVKMSAHKELLTDVLKKKIGFDGFLISDWEAIHQIP--GDYATQVRTSVNAGMDMFMEPYstPQFVQTLLA 377
Cdd:COG1472   210 --------NGVPATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAehYDPAEAAVLALNAGLDLEMPGG--KAFIAALLE 279
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 378 EVQAGRVPMSRIDDAVARILKAKFELGLFEHPYTDRGNA-GTIGSPEHRAVAREAVAKSQVLLKNSGNALPLRRNQRIYV 456
Cdd:COG1472   280 AVESGELSEERIDEAVRRILRLKFRLGLFDDPYVDPERAaEVVGSPEHRALAREAARESIVLLKNDNGLLPLAALAAGGA 359
                         410
                  ....*....|..
gi 2155110242 457 AGANADDIGNQA 468
Cdd:COG1472   360 LAADAAAAAAAA 371
PRK15098 PRK15098
beta-glucosidase BglX;
17-636 1.19e-80

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 270.79  E-value: 1.19e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  17 LVALATVAALPSALAAQSAAADGPRQApylnprlpvadRVKDLLGRMTPQEKIGQMAQAERGAiDGDRDQITK-LALGSV 95
Cdd:PRK15098   10 AVSLALQPALADDLFGNHPLTPEARDA-----------FVTDLLKKMTLDEKIGQLRLISVGP-DNPKEAIREmIKAGQV 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  96 lsgGGS----TPADNTPagwadMVDAYQSKalaTRLKIPLLYGVDSVHGHNnlvgaTVFPHNIAMGATRDPGLVRREEQI 171
Cdd:PRK15098   78 ---GAIfntvTRQDIRA-----MQDQVMQL---SRLKIPLFFAYDVVHGQR-----TVFPISLGLASSWDLDAVATVGRV 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 172 TAIETKATGPQWVFAPCVCVTRDLRWGRAYESFGEDPRLVVQM-ETGLEGFEGRrrsDLATNRHVLATAKHFAGDGdTVF 250
Cdd:PRK15098  142 SAYEAADDGLNMTWAPMVDISRDPRWGRASEGFGEDTYLTSIMgKTMVKAMQGK---SPADRYSVMTSVKHFALYG-AVE 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 251 GSSTSGTYTIDQGVTVTDRehfaavdLAPYVVAVKKyGVGSIMPSFSSVdwkedgvgNPVKMSAHKELLTDVLKKKIGFD 330
Cdd:PRK15098  218 GGRDYNTVDMSPQRMFNDY-------LPPYKAGLDA-GSGGVMVALNSL--------NGTPATSDSWLLKDLLRDQWGFK 281
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 331 GFLISDWEAI-----HQIPGDYATQVRTSVNAGMDMFMepySTPQFVQTLLAEVQAGRVPMSRIDDAVARILKAKFELGL 405
Cdd:PRK15098  282 GITVSDHGAIkelikHGVAADPEDAVRLALKSGIDMSM---SDEYYSKYLPGLVKSGKVTMAELDDAVRHVLNVKYDMGL 358
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 406 FEHPYTDRGNAGT------IGSPEHRAVAREAVAKSQVLLKNSGNALPLRRNQRIYVAGANADDIGNQAGGWTvtwqgSS 479
Cdd:PRK15098  359 FNDPYSHLGPKESdpvdtnAESRLHRKEAREVARESLVLLKNRLETLPLKKSGTIAVVGPLADSQRDVMGSWS-----AA 433
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 480 GDIIPGTTILDGIRQ---NSSQVTYS-----------------------QDASAPTA----------GNDVGIVVVGEkp 523
Cdd:PRK15098  434 GVADQSVTVLQGIKNavgDKAKVLYAkganvtddkgiidflnqyeeavkVDPRSPQAmideavqaakQADVVVAVVGE-- 511
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 524 yAEGVGDVGNGHT-LNLSDADEAAVDKVCSAIRTCVVLDVAGRPQIVTDQLAKTDAFVMSWLPGSEGA-GVADVLFGRRA 601
Cdd:PRK15098  512 -AQGMAHEASSRTdITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGnAIADVLFGDYN 590
                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2155110242 602 FTGRLPVTWPRAEAQEPI-----NVGdRDYR-----------------PLFPYGYGL 636
Cdd:PRK15098  591 PSGKLPMSFPRSVGQIPVyynhlNTG-RPYNpdkpnkytsryfdeangPLYPFGYGL 646
Glyco_hydro_3 pfam00933
Glycosyl hydrolase family 3 N terminal domain;
64-399 1.44e-65

Glycosyl hydrolase family 3 N terminal domain;


Pssm-ID: 395747 [Multi-domain]  Cd Length: 316  Bit Score: 218.05  E-value: 1.44e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  64 TPQEKIGQMAQAERGAIDGDRDQ---ITKLALGSVLSGGGSTpadNTPAGWADMVDAYQSKALATRLKIPLLYGVDSVHG 140
Cdd:pfam00933   1 TLDEKIGQLLQVEVGEGKPSHEEaelLKDYHVGGIILFGGNL---EDWVQLSDLIRYQRQAVEESRLGIPLLVAVDQEGG 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 141 HNNLVGA-TVFPHNIAMGATRDPGLVRREEQITAIETKATGPQWVFAPCVCVTRDLRWGRAYESFGEDPRLVVQMetGLE 219
Cdd:pfam00933  78 RVQRFGEgTMFPSAIALAATSDPDLAKQMGWAMAREMRALGIDWDFAPVVDVARDPRWGIGERSFSEDPQLVSAL--AGA 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 220 GFEGRRRSdlatnrHVLATAKHFAGDGDtvfGSSTSGTytiDQGVTVTDREHFAAVDLAPYVVAVKKyGVGSIMPS---F 296
Cdd:pfam00933 156 MIEGLQGA------GVLATVKHFPGHGH---GATDSHK---ETPTTPRPEQRLRTVDLLPFQAAIEA-GVDAVMAAhviY 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 297 SSVDwkedgvgnPVKMSAHKELLTDVLKKKIGFDGFLISDWEAIHQI--PGDYATQVRTSVNAGMDMFMEPystPQFVQT 374
Cdd:pfam00933 223 SSLD--------GTPATGSKYLLTDVLRKKWGFDGIVVSDDLSMKGIadHGGPAEAVRRALEAGVDIALVP---EERTKY 291
                         330       340
                  ....*....|....*....|....*
gi 2155110242 375 LLAEVQAGRVPMSRIDDAVARILKA 399
Cdd:pfam00933 292 LKKVVKNGKLPMARIDAAVRRVLRL 316
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
437-636 4.45e-43

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 154.01  E-value: 4.45e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 437 VLLKNSGNALPLRRNQ-RIYVAGANADDIGNQAGGWtvtwqgSSGDIIPGTTILDGIRQ-------------------NS 496
Cdd:pfam01915   2 VLLKNENGLLPLPKKAkKIAVIGPNADDPPNGGGGS------GTGNPPYLVTPLDGIRAragdlyadgahltvilsngTA 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 497 SQVTYSQDASAPTAGNDVGIVVVGEKPYAEGVG-DVGNghtLNLSDADEAAVDKVCSAIRTCVVLDVAGRPQIVT-DQLA 574
Cdd:pfam01915  76 DDDAGIAEAVAAAKDADVAIVFVGLDPETEGEGyDRTD---LALPGNQDALIKAVAAAGKPTVVVLHSGGPVEMEpWAEE 152
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2155110242 575 KTDAFVMSWLPGSE-GAGVADVLFGRRAFTGRLPVTWPRAEAQEPInVGDRDYRPLFPYGYGL 636
Cdd:pfam01915 153 NVDAILAAWYPGQEgGNAIADVLFGDVNPSGKLPVTFPKSLEDLPA-EGGPLLPDLYPEGYGL 214
 
Name Accession Description Interval E-value
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
63-468 2.29e-124

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 375.96  E-value: 2.29e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  63 MTPQEKIGQMAQAERGAIDgdRDQITKLALGSVLSGggstpadnTPAGWADMVDAYQSkalATRLKIPLLYGVDSVHGHN 142
Cdd:COG1472     1 MTLEEKIGQLFQVGVTGEG--AELIREGHVGGVILF--------DPAQWAELTNELQR---ATRLGIPLLIGTDAEHGVA 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 143 N--LVGATVFPHNIAMGATRDPGLVRREEQITAIETKATGPQWVFAPCVCVTRDLRWGRAYESFGEDPRLVVQMETGL-E 219
Cdd:COG1472    68 NrpAGGATVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDINRDPRWGRNFESFGEDPYLVGRMAAAYvR 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 220 GFEGrrrsdlatnRHVLATAKHFAGDGDTVFGSstsgtytiDQGVTVTDREHFAAVDLAPYVVAVKKyGVGSIMPSFSSV 299
Cdd:COG1472   148 GLQG---------NGVAATAKHFAGHGDEETGR--------HTGPVDVSERELREIYLPPFEAAIKA-GVASVMTAYNAL 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 300 dwkedgvgNPVKMSAHKELLTDVLKKKIGFDGFLISDWEAIHQIP--GDYATQVRTSVNAGMDMFMEPYstPQFVQTLLA 377
Cdd:COG1472   210 --------NGVPATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAehYDPAEAAVLALNAGLDLEMPGG--KAFIAALLE 279
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 378 EVQAGRVPMSRIDDAVARILKAKFELGLFEHPYTDRGNA-GTIGSPEHRAVAREAVAKSQVLLKNSGNALPLRRNQRIYV 456
Cdd:COG1472   280 AVESGELSEERIDEAVRRILRLKFRLGLFDDPYVDPERAaEVVGSPEHRALAREAARESIVLLKNDNGLLPLAALAAGGA 359
                         410
                  ....*....|..
gi 2155110242 457 AGANADDIGNQA 468
Cdd:COG1472   360 LAADAAAAAAAA 371
PRK15098 PRK15098
beta-glucosidase BglX;
17-636 1.19e-80

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 270.79  E-value: 1.19e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  17 LVALATVAALPSALAAQSAAADGPRQApylnprlpvadRVKDLLGRMTPQEKIGQMAQAERGAiDGDRDQITK-LALGSV 95
Cdd:PRK15098   10 AVSLALQPALADDLFGNHPLTPEARDA-----------FVTDLLKKMTLDEKIGQLRLISVGP-DNPKEAIREmIKAGQV 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  96 lsgGGS----TPADNTPagwadMVDAYQSKalaTRLKIPLLYGVDSVHGHNnlvgaTVFPHNIAMGATRDPGLVRREEQI 171
Cdd:PRK15098   78 ---GAIfntvTRQDIRA-----MQDQVMQL---SRLKIPLFFAYDVVHGQR-----TVFPISLGLASSWDLDAVATVGRV 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 172 TAIETKATGPQWVFAPCVCVTRDLRWGRAYESFGEDPRLVVQM-ETGLEGFEGRrrsDLATNRHVLATAKHFAGDGdTVF 250
Cdd:PRK15098  142 SAYEAADDGLNMTWAPMVDISRDPRWGRASEGFGEDTYLTSIMgKTMVKAMQGK---SPADRYSVMTSVKHFALYG-AVE 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 251 GSSTSGTYTIDQGVTVTDRehfaavdLAPYVVAVKKyGVGSIMPSFSSVdwkedgvgNPVKMSAHKELLTDVLKKKIGFD 330
Cdd:PRK15098  218 GGRDYNTVDMSPQRMFNDY-------LPPYKAGLDA-GSGGVMVALNSL--------NGTPATSDSWLLKDLLRDQWGFK 281
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 331 GFLISDWEAI-----HQIPGDYATQVRTSVNAGMDMFMepySTPQFVQTLLAEVQAGRVPMSRIDDAVARILKAKFELGL 405
Cdd:PRK15098  282 GITVSDHGAIkelikHGVAADPEDAVRLALKSGIDMSM---SDEYYSKYLPGLVKSGKVTMAELDDAVRHVLNVKYDMGL 358
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 406 FEHPYTDRGNAGT------IGSPEHRAVAREAVAKSQVLLKNSGNALPLRRNQRIYVAGANADDIGNQAGGWTvtwqgSS 479
Cdd:PRK15098  359 FNDPYSHLGPKESdpvdtnAESRLHRKEAREVARESLVLLKNRLETLPLKKSGTIAVVGPLADSQRDVMGSWS-----AA 433
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 480 GDIIPGTTILDGIRQ---NSSQVTYS-----------------------QDASAPTA----------GNDVGIVVVGEkp 523
Cdd:PRK15098  434 GVADQSVTVLQGIKNavgDKAKVLYAkganvtddkgiidflnqyeeavkVDPRSPQAmideavqaakQADVVVAVVGE-- 511
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 524 yAEGVGDVGNGHT-LNLSDADEAAVDKVCSAIRTCVVLDVAGRPQIVTDQLAKTDAFVMSWLPGSEGA-GVADVLFGRRA 601
Cdd:PRK15098  512 -AQGMAHEASSRTdITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGnAIADVLFGDYN 590
                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2155110242 602 FTGRLPVTWPRAEAQEPI-----NVGdRDYR-----------------PLFPYGYGL 636
Cdd:PRK15098  591 PSGKLPMSFPRSVGQIPVyynhlNTG-RPYNpdkpnkytsryfdeangPLYPFGYGL 646
Glyco_hydro_3 pfam00933
Glycosyl hydrolase family 3 N terminal domain;
64-399 1.44e-65

Glycosyl hydrolase family 3 N terminal domain;


Pssm-ID: 395747 [Multi-domain]  Cd Length: 316  Bit Score: 218.05  E-value: 1.44e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  64 TPQEKIGQMAQAERGAIDGDRDQ---ITKLALGSVLSGGGSTpadNTPAGWADMVDAYQSKALATRLKIPLLYGVDSVHG 140
Cdd:pfam00933   1 TLDEKIGQLLQVEVGEGKPSHEEaelLKDYHVGGIILFGGNL---EDWVQLSDLIRYQRQAVEESRLGIPLLVAVDQEGG 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 141 HNNLVGA-TVFPHNIAMGATRDPGLVRREEQITAIETKATGPQWVFAPCVCVTRDLRWGRAYESFGEDPRLVVQMetGLE 219
Cdd:pfam00933  78 RVQRFGEgTMFPSAIALAATSDPDLAKQMGWAMAREMRALGIDWDFAPVVDVARDPRWGIGERSFSEDPQLVSAL--AGA 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 220 GFEGRRRSdlatnrHVLATAKHFAGDGDtvfGSSTSGTytiDQGVTVTDREHFAAVDLAPYVVAVKKyGVGSIMPS---F 296
Cdd:pfam00933 156 MIEGLQGA------GVLATVKHFPGHGH---GATDSHK---ETPTTPRPEQRLRTVDLLPFQAAIEA-GVDAVMAAhviY 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 297 SSVDwkedgvgnPVKMSAHKELLTDVLKKKIGFDGFLISDWEAIHQI--PGDYATQVRTSVNAGMDMFMEPystPQFVQT 374
Cdd:pfam00933 223 SSLD--------GTPATGSKYLLTDVLRKKWGFDGIVVSDDLSMKGIadHGGPAEAVRRALEAGVDIALVP---EERTKY 291
                         330       340
                  ....*....|....*....|....*
gi 2155110242 375 LLAEVQAGRVPMSRIDDAVARILKA 399
Cdd:pfam00933 292 LKKVVKNGKLPMARIDAAVRRVLRL 316
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
437-636 4.45e-43

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 154.01  E-value: 4.45e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 437 VLLKNSGNALPLRRNQ-RIYVAGANADDIGNQAGGWtvtwqgSSGDIIPGTTILDGIRQ-------------------NS 496
Cdd:pfam01915   2 VLLKNENGLLPLPKKAkKIAVIGPNADDPPNGGGGS------GTGNPPYLVTPLDGIRAragdlyadgahltvilsngTA 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 497 SQVTYSQDASAPTAGNDVGIVVVGEKPYAEGVG-DVGNghtLNLSDADEAAVDKVCSAIRTCVVLDVAGRPQIVT-DQLA 574
Cdd:pfam01915  76 DDDAGIAEAVAAAKDADVAIVFVGLDPETEGEGyDRTD---LALPGNQDALIKAVAAAGKPTVVVLHSGGPVEMEpWAEE 152
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2155110242 575 KTDAFVMSWLPGSE-GAGVADVLFGRRAFTGRLPVTWPRAEAQEPInVGDRDYRPLFPYGYGL 636
Cdd:pfam01915 153 NVDAILAAWYPGQEgGNAIADVLFGDVNPSGKLPVTFPKSLEDLPA-EGGPLLPDLYPEGYGL 214
PLN03080 PLN03080
Probable beta-xylosidase; Provisional
44-638 9.14e-34

Probable beta-xylosidase; Provisional


Pssm-ID: 178629 [Multi-domain]  Cd Length: 779  Bit Score: 137.68  E-value: 9.14e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242  44 PYLNPRLPVADRVKDLLGRMTPQEKIGQMAqaergaidgdrdqitklalgsvlsgggstpadNTPAGwadmvdayqskal 123
Cdd:PLN03080   41 PFCNASLPIPARARSLVSLLTLDEKIAQLS--------------------------------NTAAG------------- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 124 ATRLKIPLL-YGVDSVHG-----------HNNLVGATVFPHNIAMGATRDPGLVRREEQITAIETKA--TGPQ-----Wv 184
Cdd:PLN03080   76 VPRLGIPPYeWWSESLHGladngpgvsfnSGPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAmyNAGQagltfW- 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 185 fAPCVCVTRDLRWGRAYESFGEDPRLVVqmETGLE---GFEGRR----RSDLATNRHVL-ATAKHFAGDGDTVFGSSTSg 256
Cdd:PLN03080  155 -APNINIFRDPRWGRGQETPGEDPAVAS--AYSVEfvkGFQGGKwkkvRDDGEDGKLMLsACCKHYTAYDLEKWGNFSR- 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 257 tYTIDQGVTVTDREHFAAvdlAPYVVAVKKYGVGSIMPSFSSVdwkedgvgNPVKMSAHKELLTDVlKKKIGFDGFLISD 336
Cdd:PLN03080  231 -YTFNAVVTEQDMEDTYQ---PPFKSCIQEGKASCLMCSYNQV--------NGVPACARKDLLQKA-RDEWGFQGYITSD 297
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 337 WEA---IHQIPGdYATQVRTSV----NAGMDMFMEPYstpqFVQTLLAEVQAGRVPMSRIDDAVARILKAKFELGLFEHP 409
Cdd:PLN03080  298 CDAvatIFEYQT-YTKSPEDAVadvlKAGMDINCGSY----MLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGD 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 410 yTDRGNAGTIG-----SPEHRAVAREAVAKSQVLLKNSGNALPLRRNQRIYVA--GANADDIGNQAGGWTvtwqgssGDI 482
Cdd:PLN03080  373 -PRNGWYGKLGpnnvcTKEHRELALEAARQGIVLLKNDKKFLPLNKSEVSSLAiiGPMANDPYNLGGDYT-------GVP 444
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 483 IPGTTILDGIRQNSSQVTYS--------------QDASAPTAGNDVGIVVVGekpyaegvgdvgnghtLNLSDADE---- 544
Cdd:PLN03080  445 CQPTTLFKGLQAYVKKTSFAagckdvscnsdtgfGEAIAIAKRADFVVVVAG----------------LDLSQETEdhdr 508
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 545 ----------AAVDKVCSAIRTCVVLDV-AGRPQIVTdqLAKTDAFVMS--WL--PGSEGAGV-ADVLFGRRAFTGRLPV 608
Cdd:PLN03080  509 vslllpgkqmDLISSVASVSKKPVVLVLtGGGPVDVS--FAKQDPRIASilWIgyPGEVGGQAlAEIIFGDYNPGGRLPM 586
                         650       660       670
                  ....*....|....*....|....*....|.
gi 2155110242 609 TW-PRAEAQEPINvgDRDYRPLFPYGYGLKT 638
Cdd:PLN03080  587 TWyPESFTAVPMT--DMNMRADPSRGYPGRT 615
PRK05337 PRK05337
beta-hexosaminidase; Provisional
203-361 8.89e-04

beta-hexosaminidase; Provisional


Pssm-ID: 235417 [Multi-domain]  Cd Length: 337  Bit Score: 42.07  E-value: 8.89e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 203 SFGEDPRLVVQMETGLegFEGRRRSDLAtnrhvlATAKHFAGDGdTVFGSSTsgtytIDQGVTVTDREHFAAVDLAPYVv 282
Cdd:PRK05337  136 AFHRDPQVVAALASAF--IDGMHAAGMA------ATGKHFPGHG-AVEADSH-----VETPVDERPLEEIRAEDMAPFR- 200
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2155110242 283 AVKKYGVGSIMP-------------SFSSVdWkedgvgnpvkmsahkelLTDVLKKKIGFDGFLISD---WEAIHQIpGD 346
Cdd:PRK05337  201 ALIAAGLDAVMPahviypqvdprpaGFSRY-W-----------------LQDILRQELGFDGVIFSDdlsMEGAAVA-GD 261
                         170
                  ....*....|....*
gi 2155110242 347 YATQVRTSVNAGMDM 361
Cdd:PRK05337  262 YAERAQAALDAGCDM 276
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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